F429110

General Info

Members Datasets Scaffolds Average Seq Length
381 240 325 808

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2643221579|2643905665
Length 863
Sequence FSGQARSKGHPQTAKPGTVALRPTPASQELPQSDVMMTRLPSRRLLALALASAIAMPALAQTTEPAATPAAAAPLSSESFTATDIRIDGLQRISAGTVLTYLPIERGDMVTPSGVSESIRALYKTGFFEEVKLDRQGDILVVTVTERPAINKLTLTGNKDIKTDDLMSGLKDIGLAEGETFDRLSLDRVTQELVRQYNNRGKYNVEITPTVSPLDRNRVDVTIAVKEGKAAKIKHVNVVGAEKFETEDLLENWESKESSWLSWYRRDDQYSKEKLSGDMERLNSYYLDRGYVDFNIDSTQVSISPDKRDMFITAGITEGEQYKISEVKVTGDTVLPKEEIEKLVIVKPEQTFSRILLEMTSDSITATLGNIGHAFAQVNPIPTIDRENRTVAINLQVVPGPRVNVRRVVFKGNTRTSDEVMRREMRQFEGSWFSQVAVDRSRVRLRRLGYFETVDVETTPVPGTTDQVDVVYTVKETTSGSFVFGLGYSQLSGLTTSIQLSQNNFLGGGNRVAVEAQRSDYLQRYSFSYTNPFFTDEGMSLGYNLWWREFDYSDFNTAQYSTTSAAAQGVLGLPITENDTVSLLFGVDSNEILTFEGSTPQSIVDYINAVGQRTFHAWRTELGWARDTRNDYFMPTGGTYQRVSAEIALPGSTVEYYKLNYEFSKYWSLSPSFVLNTRAEVGYGDSYGSEIYRYICRVNGSDPQIPGGSNTTTTPAADGTCADGGTLHRTLVADGLPFFENFYAGGTRSVRGFRDNTLGPRSEVISGYRGQPLGGSLKTTGSVELIFPKLFDSNAARVSAFFDFGNVFDGVDNFDAGELRASTGVALLWRAPVGPISISYAFPLKKEEGDELERLQFTFGGAF

Samples

Sample ID Description Type Environment
1 2547132130 Stenotrophomonas maltophilia RR-10 Isolate Unclassified
2 2571042365 Lysobacter oryzae DSM 21044 Isolate Rhizosphere
3 2576861471 Stenotrophomonas rhizophila DSM 14405 Isolate Rhizosphere
4 2643221573 Lysobacter sp. Root604 Isolate Unclassified
5 2643221579 Pseudoxanthomonas sp. Root630 Isolate Unclassified
6 2643221581 Pseudoxanthomonas sp. Root65 Isolate Unclassified
7 2643221586 Lysobacter sp. Root667 Isolate Unclassified
8 2643221593 Lysobacter sp. Root690 Isolate Unclassified
9 2643221695 Lysobacter sp. Root494 Isolate Unclassified
10 2643221720 Lysobacter sp. Root916 Isolate Unclassified
11 2643221727 Lysobacter sp. Root96 Isolate Unclassified
12 2643221728 Lysobacter sp. Root983 Isolate Unclassified
13 2747842428 Stenotrophomonas sp. WCS2014-113 Isolate Unclassified
14 2747842501 Xanthomonas sp. WCS2014-23 Isolate Unclassified
15 2765235840 Stenotrophomonas maltophilia AA1 Isolate Unclassified
16 2816332141 Stenotrophomonas muris 1190 (v2) (version 2) Isolate Unclassified
17 2818991457 Xanthomonas translucens 569 Isolate Unclassified
18 2842391507 Stenotrophomonas maltophilia SEMIA 4027 Isolate Nodule
19 2842757796 Stenotrophomonas sp. R-72406 Isolate Unclassified
20 2842780639 Pseudoxanthomonas sp. R-71986 Isolate Unclassified
21 2852649853 Stenotrophomonas sp. JAI102 Isolate Rhizosphere
22 2852684882 Xanthomonas sp. JAI131 Isolate Rhizosphere
23 2857442823 Stenotrophomonas sp. R-74235 Isolate Unclassified
24 2874220319 Stenotrophomonas maltophilia PS5 Isolate Unclassified
25 2894414249 Luteimonas sp. LNNU 24178 Isolate Rhizosphere
26 2895498888 Pseudoxanthomonas sp. SGD-10 Isolate Rhizosphere
27 2895511927 Pseudoxanthomonas sp. SGD-5-1 Isolate Rhizosphere
28 2895522137 Pseudoxanthomonas sp. SGNA-20 Isolate Rhizosphere
29 2895525241 Pseudoxanthomonas sp. SGT-18 Isolate Rhizosphere
30 2919089067 Stenotrophomonas sp. 1337 Isolate Rhizosphere
31 2919130084 Xanthomonas sp. 1678 Isolate Rhizosphere
32 2919134579 Stenotrophomonas geniculata 1733 Isolate Rhizosphere
33 2919513703 Luteimonas sp. 3794 Isolate Unclassified
34 2919675420 Luteimonas terrae 4099 Isolate Unclassified
35 2923516293 Pseudoxanthomonas mexicana SLBN-89 Isolate Rhizosphere
36 2928496128 Stenotrophomonas indicatrix 1163 Isolate Unclassified
37 2929195423 Xanthomonas sp. R-73098 Hybrid assembly Isolate Unclassified
38 2931380184 Stenotrophomonas sp. DR822 Isolate Rhizosphere
39 2937610967 Stenotrophomonas maltophilia EP20 Isolate Unclassified
40 2939589442 Stenotrophomonas rhizophila 716 Isolate Rhizosphere
41 2939622612 Stenotrophomonas sp. 2619 Isolate Rhizosphere
42 2939626828 Stenotrophomonas sp. 2694 Isolate Rhizosphere
43 2941475908 Stenotrophomonas rhizophila 2680 Isolate Rhizosphere
44 2941489479 Lysobacter enzymogenes 2943 Isolate Rhizosphere
45 2961047084 Stenotrophomonas maltophilia EP5 Isolate Unclassified
46 2961064222 Stenotrophomonas maltophilia EP13 Isolate Unclassified
47 2974307012 Stenotrophomonas sp. SORGH_AS_0282 Isolate Unclassified
48 2977247770 Stenotrophomonas rhizophila SORGH_AS 457 Isolate Unclassified
49 2984514374 Stenotrophomonas sp. SORGH_AS282 Isolate Aerial Root
50 2987605356 Stenotrophomonas sp. ATCM1_4 Isolate Unclassified
51 2995948881 Lysobacter enzymogenes B25 Isolate Unclassified
52 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
53 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
54 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
55 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
56 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
57 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
58 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
59 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
60 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
61 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
62 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
63 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
64 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
65 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
66 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
67 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
68 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
69 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
70 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
71 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
72 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
73 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
74 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
75 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
76 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
77 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
78 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
79 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
80 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
81 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
82 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
83 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
84 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
85 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
86 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
87 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
88 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
89 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
90 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
91 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
92 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
93 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
94 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
95 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
96 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
97 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
98 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
99 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
100 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
101 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
102 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
103 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
104 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
105 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
106 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
107 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
108 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
109 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
110 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
111 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
112 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
113 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
114 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
115 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
116 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
117 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
118 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
119 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
120 3300015689 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A02 Metagenome Rhizosphere
121 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
122 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
123 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
124 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
125 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
126 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
127 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
128 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
129 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
130 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
131 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
132 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
133 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
134 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
135 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
136 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
137 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
138 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
139 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
140 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
141 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
142 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
143 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
144 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
145 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
146 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
147 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
148 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
149 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
150 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
151 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
152 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
153 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
154 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
155 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
156 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
157 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
158 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
159 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
160 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
161 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
162 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
163 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
164 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
165 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
166 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
167 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
168 3300027360 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes) (version 2) Metagenome Rhizosphere
169 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
170 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
171 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
172 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
173 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
174 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
175 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
176 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
177 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
178 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
179 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
180 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
181 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
182 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
183 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
184 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
185 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
186 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
187 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
188 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
189 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
190 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
191 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
192 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
193 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
194 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
195 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
196 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
197 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
198 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
199 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
200 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
201 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
202 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
203 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
204 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
205 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
206 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
207 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
208 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
209 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
210 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
211 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
212 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
213 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
214 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
215 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
216 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
217 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
218 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
219 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
220 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
221 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
222 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
223 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
224 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
225 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
226 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
227 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
228 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
229 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
230 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
231 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
232 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
233 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
234 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
235 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
236 8002869464 Pseudoxanthomonas helianthi 110414 Isolate Unclassified
237 8003014200 Lysobacter changpingensis Cm-3-T8 Isolate Rhizosphere
238 8021622325 Xanthomonas sp. LMG12462 Isolate Rhizosphere
239 8021626552 Xanthomonas sp. LMG12460 Isolate Rhizosphere
240 8021648035 Xanthomonas sp. LMG 12461 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 83.46
Metatranscriptomes 1.84
Isolates 14.7

Biome Distribution

Category Percentage (%)
Aerial Root 0.26
Bulb 0
Endosphere 12.34
Nodule 0.26
Rhizoplane 1.57
Rhizosphere 73.75
Stem 0
Stem Tuber 0
Unclassified 11.81

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24736J21556_1002446 3300001904 Bacteria 3282
2 JGI24741J21665_1000761 3300001915 Bacteria 9683
3 JGI24740J21852_10000728 3300001979 Bacteria 14334
4 JGI24740J21852_10000870 3300001979 Bacteria 13348
5 JGI24740J21852_10011047 3300001979 Bacteria 3452
6 JGI25152J39213_1000018 3300002773 Bacteria 109715
7 JGI25150J39212_1000159 3300002774 Bacteria 38345
8 JGI25151J46595_10000111 3300003187 Bacteria 111802
9 JGI25151J46595_10000253 3300003187 Bacteria 62673
10 JGI25153J46596_10000085 3300003215 Bacteria 111802
11 Ga0055526_1000036 3300003771 Bacteria 135235
12 Ga0055526_1000328 3300003771 Bacteria 39221
13 Ga0055526_1008530 3300003771 Bacteria 5091
14 Ga0055537_1000083 3300003773 Bacteria 68713
15 Ga0055537_1000788 3300003773 Bacteria 15899
16 Ga0055524_1000638 3300003775 Bacteria 24917
17 Ga0055534_1000089 3300003784 Bacteria 71523
18 Ga0055534_1000103 3300003784 Bacteria 65838
19 Ga0055528_1000004 3300003790 Bacteria 285772
20 Ga0055528_1001461 3300003790 Bacteria 14388
21 Ga0055530_10004028 3300003791 Bacteria 7894
22 Ga0058692_1000002 3300003856 Bacteria 508401
23 Ga0058692_1000020 3300003856 Bacteria 250589
24 Ga0058862_10036726 3300004803 Bacteria 4089
25 Ga0065704_10000561 3300005289 Bacteria 16755
26 Ga0065704_10072941 3300005289 Bacteria 7776
27 Ga0065707_10087972 3300005295 Bacteria 4823
28 Ga0070658_10074533 3300005327 Bacteria 2783
29 Ga0070683_100004407 3300005329 Bacteria 11593
30 Ga0068869_100054364 3300005334 Bacteria 2915
31 Ga0070666_10000609 3300005335 Bacteria 21522
32 Ga0070666_10020374 3300005335 Bacteria 4286
33 Ga0070682_100001082 3300005337 Bacteria 15696
34 Ga0070660_100006001 3300005339 Bacteria 8398
35 Ga0070691_10010963 3300005341 Bacteria 4139
36 Ga0070691_10013671 3300005341 Bacteria 3721
37 Ga0070691_10030169 3300005341 Bacteria 2539
38 Ga0070661_100003231 3300005344 Bacteria 11233
39 Ga0070661_100046283 3300005344 Bacteria 3182
40 Ga0070692_10000184 3300005345 Bacteria 16448
41 Ga0070668_100014686 3300005347 Bacteria 5852
42 Ga0070671_100015755 3300005355 Bacteria 6108
43 Ga0070659_100008642 3300005366 Bacteria 7448
44 Ga0070659_100039497 3300005366 Bacteria 3685
45 Ga0070714_100044398 3300005435 Bacteria 3763
46 Ga0070662_100003343 3300005457 Bacteria 9998
47 Ga0070681_10000613 3300005458 Bacteria 29320
48 Ga0070681_10029893 3300005458 Bacteria 5468
49 Ga0070681_10061872 3300005458 Bacteria 3717
50 Ga0070679_100000184 3300005530 Bacteria 50485
51 Ga0070679_100000311 3300005530 Bacteria 41294
52 Ga0070679_100000533 3300005530 Bacteria 32374
53 Ga0070684_100027394 3300005535 Bacteria 4809
54 Ga0070684_100033899 3300005535 Bacteria 4362
55 Ga0068853_100013956 3300005539 Bacteria 6570
56 Ga0070672_100003333 3300005543 Bacteria 10405
57 Ga0070696_100007448 3300005546 Bacteria 7320
58 Ga0070696_100008590 3300005546 Bacteria 6833
59 Ga0070693_100003431 3300005547 Bacteria 7395
60 Ga0070665_100065602 3300005548 Bacteria 3641
61 Ga0068855_100003226 3300005563 Bacteria 19961
62 Ga0068855_100038184 3300005563 Bacteria 5706
63 Ga0070664_100005629 3300005564 Bacteria 10086
64 Ga0068854_100015818 3300005578 Bacteria 5011
65 Ga0068854_100038704 3300005578 Bacteria 3355
66 Ga0068856_100020259 3300005614 Bacteria 6459
67 Ga0068852_100078250 3300005616 Bacteria 2925
68 Ga0068864_100060734 3300005618 Bacteria 3273
69 Ga0068863_100010080 3300005841 Bacteria 9193
70 Ga0068860_100012943 3300005843 Bacteria 8194
71 Ga0075364_10000021 3300006051 Bacteria 53922
72 Ga0105251_10000010 3300009011 Bacteria 186242
73 Ga0105251_10009436 3300009011 Bacteria 5762
74 Ga0105250_10000005 3300009092 Bacteria 422580
75 Ga0105240_10005381 3300009093 Bacteria 19092
76 Ga0105240_10030045 3300009093 Bacteria 7068
77 Ga0105240_10031291 3300009093 Bacteria 6903
78 Ga0105240_10042623 3300009093 Bacteria 5783
79 Ga0105241_10002020 3300009174 Bacteria 15342
80 Ga0105241_10008562 3300009174 Bacteria 7520
81 Ga0105248_10090244 3300009177 Bacteria 3451
82 Ga0105237_10014390 3300009545 Bacteria 8275
83 Ga0105237_10079350 3300009545 Bacteria 3272
84 Ga0105238_10052350 3300009551 Bacteria 4103
85 Ga0105239_10044292 3300010375 Bacteria 4879
86 Ga0157373_10031007 3300013100 Bacteria 3847
87 Ga0157371_10004042 3300013102 Bacteria 12973
88 Ga0157371_10006377 3300013102 Bacteria 9752
89 Ga0157370_10001400 3300013104 Bacteria 29908
90 Ga0157370_10032171 3300013104 Bacteria 5124
91 Ga0157370_10068771 3300013104 Bacteria 3346
92 Ga0157369_10001294 3300013105 Bacteria 31084
93 Ga0157369_10011967 3300013105 Bacteria 9856
94 Ga0157369_10027197 3300013105 Bacteria 6343
95 Ga0157374_10057871 3300013296 Bacteria 3621
96 Ga0157378_10000619 3300013297 Bacteria 33473
97 Ga0163162_10000021 3300013306 Bacteria 214873
98 Ga0157372_10002348 3300013307 Bacteria 20470
99 Ga0157372_10004810 3300013307 Bacteria 14353
100 Ga0157372_10020999 3300013307 Bacteria 7050
101 Ga0157372_10099702 3300013307 Bacteria 3314
102 Ga0157375_10087238 3300013308 Bacteria 3172
103 Ga0163163_10000213 3300014325 Bacteria 60063
104 Ga0163163_10004231 3300014325 Bacteria 12233
105 Ga0182008_10010784 3300014497 Bacteria 4883
106 Ga0157379_10010562 3300014968 Bacteria 8051
107 Ga0183360_10001 3300015689 Bacteria 3943671
108 Ga0206351_10052898 3300020077 Bacteria 5047
109 Ga0206352_10329496 3300020078 Bacteria 3220
110 Ga0206350_11487973 3300020080 Bacteria 5208
111 Ga0206354_10464072 3300020081 Bacteria 6343
112 Ga0224712_10005008 3300022467 Bacteria 3641
113 Ga0207425_1000028 3300025245 Bacteria 286333
114 Ga0209129_1000065 3300025258 Bacteria 232568
115 Ga0209565_1000001 3300025263 Bacteria 2950419
116 Ga0209565_1000014 3300025263 Bacteria 530302
117 Ga0209565_1000081 3300025263 Bacteria 155639
118 Ga0209673_1000001 3300025273 Bacteria 3176258
119 Ga0209673_1000784 3300025273 Bacteria 42397
120 Ga0209675_1000001 3300025291 Bacteria 2950293
121 Ga0209675_1000021 3300025291 Bacteria 334833
122 Ga0209676_1000024 3300025292 Bacteria 578839
123 Ga0209676_1000047 3300025292 Bacteria 408645
124 Ga0209676_1000203 3300025292 Bacteria 132949
125 Ga0209025_1000002 3300025294 Bacteria 1393142
126 Ga0209025_1000015 3300025294 Bacteria 808120
127 Ga0209025_1005054 3300025294 Bacteria 10992
128 Ga0209564_1000001 3300025295 Bacteria 3176258
129 Ga0209564_1000374 3300025295 Bacteria 82748
130 Ga0209564_1006375 3300025295 Bacteria 6390
131 Ga0209758_1000003 3300025297 Bacteria 1398533
132 Ga0209050_1000521 3300025298 Bacteria 64192
133 Ga0209050_1000579 3300025298 Bacteria 59347
134 Ga0209050_1000894 3300025298 Bacteria 39568
135 Ga0209256_1000002 3300025299 Bacteria 1906740
136 Ga0209256_1006390 3300025299 Bacteria 6272
137 Ga0209051_1004055 3300025303 Bacteria 9240
138 Ga0209257_1000148 3300025304 Bacteria 193131
139 Ga0209257_1000204 3300025304 Bacteria 143800
140 Ga0209257_1000325 3300025304 Bacteria 99936
141 Ga0207656_10003593 3300025321 Bacteria 5348
142 Ga0207696_1000470 3300025711 Bacteria 34731
143 Ga0207680_10000109 3300025903 Bacteria 37453
144 Ga0207647_10001297 3300025904 Bacteria 19234
145 Ga0207647_10004252 3300025904 Bacteria 10615
146 Ga0207647_10004858 3300025904 Bacteria 9939
147 Ga0207647_10021502 3300025904 Bacteria 4306
148 Ga0207705_10000869 3300025909 Bacteria 24749
149 Ga0207705_10001104 3300025909 Bacteria 21936
150 Ga0207705_10001251 3300025909 Bacteria 20431
151 Ga0207705_10001521 3300025909 Bacteria 18403
152 Ga0207654_10000065 3300025911 Bacteria 69237
153 Ga0207707_10000070 3300025912 Bacteria 103288
154 Ga0207707_10000167 3300025912 Bacteria 69037
155 Ga0207707_10000274 3300025912 Bacteria 55548
156 Ga0207707_10000296 3300025912 Bacteria 53027
157 Ga0207707_10001746 3300025912 Bacteria 19970
158 Ga0207707_10004993 3300025912 Bacteria 11655
159 Ga0207695_10000864 3300025913 Bacteria 55428
160 Ga0207695_10002402 3300025913 Bacteria 27741
161 Ga0207695_10003863 3300025913 Bacteria 20735
162 Ga0207695_10004260 3300025913 Bacteria 19645
163 Ga0207695_10007210 3300025913 Bacteria 14213
164 Ga0207695_10083683 3300025913 Bacteria 3223
165 Ga0207671_10007197 3300025914 Bacteria 9697
166 Ga0207660_10000278 3300025917 Bacteria 33836
167 Ga0207660_10001582 3300025917 Bacteria 15270
168 Ga0207660_10005619 3300025917 Bacteria 8143
169 Ga0207657_10000612 3300025919 Bacteria 37848
170 Ga0207657_10000829 3300025919 Bacteria 32668
171 Ga0207657_10006199 3300025919 Bacteria 12431
172 Ga0207657_10007382 3300025919 Bacteria 11274
173 Ga0207657_10008630 3300025919 Bacteria 10318
174 Ga0207649_10000780 3300025920 Bacteria 20666
175 Ga0207649_10002531 3300025920 Bacteria 10181
176 Ga0207649_10022512 3300025920 Bacteria 3641
177 Ga0207652_10000078 3300025921 Bacteria 106265
178 Ga0207652_10000209 3300025921 Bacteria 61861
179 Ga0207652_10000552 3300025921 Bacteria 37934
180 Ga0207652_10001361 3300025921 Bacteria 21745
181 Ga0207652_10001550 3300025921 Bacteria 20252
182 Ga0207652_10001758 3300025921 Bacteria 18921
183 Ga0207694_10009414 3300025924 Bacteria 7366
184 Ga0207694_10013912 3300025924 Bacteria 6067
185 Ga0207650_10020012 3300025925 Bacteria 4713
186 Ga0207664_10046700 3300025929 Bacteria 3400
187 Ga0207690_10000371 3300025932 Bacteria 29794
188 Ga0207690_10004234 3300025932 Bacteria 8472
189 Ga0207706_10007015 3300025933 Bacteria 10415
190 Ga0207709_10000903 3300025935 Bacteria 22362
191 Ga0207691_10000320 3300025940 Bacteria 47773
192 Ga0207661_10001075 3300025944 Bacteria 18203
193 Ga0207667_10000740 3300025949 Bacteria 42529
194 Ga0207667_10002819 3300025949 Bacteria 21554
195 Ga0207667_10006026 3300025949 Bacteria 14750
196 Ga0207667_10008371 3300025949 Bacteria 12292
197 Ga0207640_10000264 3300025981 Bacteria 35237
198 Ga0207640_10001219 3300025981 Bacteria 14015
199 Ga0207640_10004868 3300025981 Bacteria 7294
200 Ga0207639_10001121 3300026041 Bacteria 18198
201 Ga0207639_10001133 3300026041 Bacteria 18098
202 Ga0207639_10001582 3300026041 Bacteria 15289
203 Ga0207639_10004509 3300026041 Bacteria 9389
204 Ga0207639_10010170 3300026041 Bacteria 6511
205 Ga0207678_10000588 3300026067 Bacteria 33249
206 Ga0207678_10004744 3300026067 Bacteria 12213
207 Ga0207678_10005747 3300026067 Bacteria 11068
208 Ga0207678_10007579 3300026067 Bacteria 9592
209 Ga0207702_10003555 3300026078 Bacteria 14183
210 Ga0207702_10010807 3300026078 Bacteria 7616
211 Ga0207674_10000973 3300026116 Bacteria 37480
212 Ga0207674_10002226 3300026116 Bacteria 24560
213 Ga0207674_10002862 3300026116 Bacteria 21434
214 Ga0207674_10020465 3300026116 Bacteria 7147
215 Ga0207698_10001013 3300026142 Bacteria 16369
216 Ga0207698_10001297 3300026142 Bacteria 14570
217 Ga0207698_10001673 3300026142 Bacteria 12935
218 Ga0209371_1000004 3300027312 Bacteria 1098197
219 Ga0209371_1000011 3300027312 Bacteria 848456
220 Ga0209969_1000469 3300027360 Bacteria 5392
221 Ga0209999_1000245 3300027543 Bacteria 7864
222 Ga0209983_1000052 3300027665 Bacteria 17479
223 Ga0268264_10036655 3300028381 Bacteria 4041
224 Ga0265338_10008550 3300028800 Bacteria 12393
225 Ga0268256_1000005 3300030500 Bacteria 1082342
226 Ga0268256_1000011 3300030500 Bacteria 848625
227 Ga0316183_1091538 3300030742 Bacteria 9846
228 Ga0316575_10007051 3300031665 Bacteria 4065
229 Ga0316579_10000285 3300031691 Bacteria 15471
230 Ga0307516_10013364 3300031730 Bacteria 8759
231 Ga0307412_10030668 3300031911 Bacteria 3388
232 Ga0307409_100080017 3300031995 Bacteria 2635
233 Ga0307416_100058775 3300032002 Bacteria 3120
234 Ga0307414_10002064 3300032004 Bacteria 10433
235 Ga0307414_10010774 3300032004 Bacteria 5329
236 Ga0307414_10026551 3300032004 Bacteria 3728
237 Ga0307414_10043952 3300032004 Bacteria 3046
238 Ga0307411_10021805 3300032005 Bacteria 3757
239 Ga0316583_10001463 3300032133 Bacteria 7882
240 Ga0316593_10000482 3300032168 Bacteria 7369
241 Ga0307507_10019916 3300033179 Bacteria 7534
242 Ga0395900_0010725 3300037418 Bacteria 9372
243 Ga0395900_0012265 3300037418 Bacteria 8764
244 Ga0395898_0045617 3300037466 Bacteria 4308
245 Ga0395898_0052276 3300037466 Bacteria 3991
246 Ga0395905_0067705 3300037471 Bacteria 3344
247 Ga0395905_0068326 3300037471 Bacteria 3328
248 Ga0395901_0006445 3300038443 Bacteria 11892
249 Ga0395901_0016767 3300038443 Bacteria 7464
250 Ga0237819_00962 3300038705 Bacteria 8759
251 Ga0436365_0637659 3300039437 Bacteria 3013
252 Ga0439436_0004129 3300041404 Bacteria 4451
253 Ga0439465_0003682 3300041413 Bacteria 4996
254 Ga0451800_0924472 3300041459 Bacteria 6726
255 Ga0451806_541895 3300041462 Bacteria 8568
256 Ga0451807_2187713 3300041486 Bacteria 4447
257 Ga0439432_005777 3300042006 Bacteria 4446
258 Ga0439449_0000100 3300042007 Bacteria 27698
259 Ga0439449_0002776 3300042007 Bacteria 6812
260 Ga0439449_0010035 3300042007 Bacteria 3582
261 Ga0451577_0004882 3300042876 Bacteria 13972
262 Ga0495606_0029519 3300046507 Bacteria 3848
263 Ga0495630_0020683 3300046517 Unclassified 4854
264 Ga0495663_0000292 3300046525 Bacteria 19047
265 Ga0495656_0000437 3300046615 Bacteria 13607
266 Ga0495636_0000787 3300047318 Bacteria 11672
267 Ga0496101_0017460 3300048904 Bacteria 4868
268 Ga0496112_0096504 3300048915 Bacteria 2926
269 Ga0496113_0009906 3300048916 Bacteria 6279
270 Ga0496117_0000921 3300048920 Bacteria 45010
271 Ga0496118_0047246 3300048921 Bacteria 3338
272 Ga0496119_0000320 3300048922 Bacteria 67229
273 Ga0496120_0000424 3300048923 Bacteria 67451
274 Ga0496122_0000680 3300048925 Bacteria 68089
275 Ga0496123_0000226 3300048926 Bacteria 113889
276 Ga0496124_0000032 3300048927 Bacteria 332524
277 Ga0496124_0000705 3300048927 Bacteria 54667
278 Ga0496126_0005246 3300048929 Bacteria 14906
279 Ga0496126_0038049 3300048929 Bacteria 4479
280 Ga0501290_001315 3300049513 Bacteria 3438
281 Ga0501033_0001637 3300049570 Bacteria 19670
282 Ga0501034_0000316 3300049571 Bacteria 85497
283 Ga0501034_0000462 3300049571 Bacteria 67291
284 Ga0501034_0001322 3300049571 Bacteria 33524
285 Ga0501034_0006178 3300049571 Bacteria 12914
286 Ga0501034_0006881 3300049571 Bacteria 12159
287 Ga0501034_0044593 3300049571 Bacteria 4484
288 Ga0501038_0000660 3300049574 Bacteria 30647
289 Ga0501038_0010027 3300049574 Bacteria 8677
290 Ga0501046_0007603 3300049580 Bacteria 9507
291 Ga0501046_0055394 3300049580 Bacteria 3116
292 Ga0501046_0075116 3300049580 Bacteria 2621
293 Ga0501047_0000349 3300049581 Bacteria 52184
294 Ga0501047_0000442 3300049581 Bacteria 45876
295 Ga0501047_0011035 3300049581 Bacteria 8549
296 Ga0501047_0022429 3300049581 Bacteria 6063
297 Ga0501067_0000269 3300049583 Bacteria 28395
298 Ga0501069_0002152 3300049585 Bacteria 9916
299 Ga0501069_0002562 3300049585 Bacteria 9280
300 Ga0501070_0002554 3300049586 Bacteria 15940
301 Ga0501070_0008703 3300049586 Bacteria 8581
302 Ga0501070_0014976 3300049586 Bacteria 6524
303 Ga0501070_0035109 3300049586 Bacteria 4190
304 Ga0501070_0038719 3300049586 Bacteria 3978
305 Ga0501070_0063255 3300049586 Bacteria 3065
306 Ga0501071_0015063 3300049587 Bacteria 5302
307 Ga0501072_0000955 3300049588 Bacteria 21306
308 Ga0501073_0000424 3300049589 Bacteria 28912
309 Ga0501073_0014983 3300049589 Bacteria 5624
310 Ga0501073_0016696 3300049589 Bacteria 5318
311 Ga0501074_0008913 3300049590 Bacteria 7274
312 Ga0501074_0010656 3300049590 Bacteria 6673
313 Ga0501074_0025772 3300049590 Bacteria 4266
314 Ga0501079_0013861 3300049741 Bacteria 6149
315 Ga0501080_0000241 3300049742 Bacteria 41120
316 Ga0501080_0000828 3300049742 Bacteria 25266
317 Ga0501080_0002423 3300049742 Bacteria 16279
318 Ga0501080_0004456 3300049742 Bacteria 12463
319 Ga0501080_0007133 3300049742 Bacteria 10089
320 Ga0501080_0083430 3300049742 Bacteria 2969
321 Ga0501083_0003137 3300049744 Bacteria 11496
322 Ga0501035_0050661 3300049822 Bacteria 3720
323 Ga0501044_0016358 3300049823 Bacteria 7965
324 nmdc:mga00v17_752_c1 3300050491 Bacteria 17646
325 Ga0500634_0000101 3300053161 Bacteria 33679

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046517 Ga0495630_0020683 Ga0495630_0020683_1089_3389 701
2 iso_pu_bacteria 2643221586 2643939110 729
3 iso_pu_bacteria 2643221727 2644694625 729
4 3300009545 Ga0105237_10079350 Ga0105237_100793502 733
5 3300013308 Ga0157375_10087238 Ga0157375_100872382 741
6 3300046615 Ga0495656_0000437 Ga0495656_0000437_5937_8414 743
7 3300005435 Ga0070714_100044398 Ga0070714_1000443982 749
8 3300025929 Ga0207664_10046700 Ga0207664_100467002 749
9 3300028800 Ga0265338_10008550 Ga0265338_100085501 749
10 3300005295 Ga0065707_10087972 Ga0065707_100879722 750
11 3300009092 Ga0105250_10000005 Ga0105250_10000005135 750
12 3300025711 Ga0207696_1000470 Ga0207696_100047017 750
13 3300032168 Ga0316593_10000482 Ga0316593_100004824 750
14 3300053161 Ga0500634_0000101 Ga0500634_0000101_3845_6187 750
15 3300031665 Ga0316575_10007051 Ga0316575_100070512 751
16 3300031691 Ga0316579_10000285 Ga0316579_1000028516 751
17 3300032133 Ga0316583_10001463 Ga0316583_100014633 751
18 3300046507 Ga0495606_0029519 Ga0495606_0029519_1135_3627 751
19 3300005543 Ga0070672_100003333 Ga0070672_1000033334 752
20 3300025940 Ga0207691_10000320 Ga0207691_1000032018 752
21 3300033179 Ga0307507_10019916 Ga0307507_100199162 752
22 3300049574 Ga0501038_0000660 Ga0501038_0000660_11329_13623 752
23 3300049580 Ga0501046_0055394 Ga0501046_0055394_314_2620 752
24 3300049742 Ga0501080_0000241 Ga0501080_0000241_5950_8244 752
25 3300009093 Ga0105240_10005381 Ga0105240_1000538112 753
26 3300048927 Ga0496124_0000032 Ga0496124_0000032_313464_315953 753
27 3300049822 Ga0501035_0050661 Ga0501035_0050661_1073_3613 757
28 3300025292 Ga0209676_1000024 Ga0209676_1000024520 761
29 3300042876 Ga0451577_0004882 Ga0451577_0004882_2300_4759 761
30 3300025925 Ga0207650_10020012 Ga0207650_100200123 762
31 3300027360 Ga0209969_1000469 Ga0209969_10004692 762
32 3300027665 Ga0209983_1000052 Ga0209983_10000524 762
33 3300042007 Ga0439449_0000100 Ga0439449_0000100_4407_6896 762
34 3300049571 Ga0501034_0001322 Ga0501034_0001322_6260_8743 763
35 3300049571 Ga0501034_0006881 Ga0501034_0006881_7727_10279 763
36 3300006051 Ga0075364_10000021 Ga0075364_1000002119 765
37 3300025935 Ga0207709_10000903 Ga0207709_1000090310 765
38 3300027543 Ga0209999_1000245 Ga0209999_10002455 765
39 3300049513 Ga0501290_001315 Ga0501290_001315_357_2810 765
40 3300050491 nmdc:mga00v17_752_c1 nmdc:mga00v17_752_c1_6765_9260 765
41 iso_pu_bacteria 2547132130 2547502976 765
42 iso_pu_bacteria 2816332141 2816516358 765
43 iso_pu_bacteria 2842391507 2842392931 765
44 iso_pu_bacteria 2842757796 2842758707 765
45 iso_pu_bacteria 2874220319 2874220960 765
46 iso_pu_bacteria 2895498888 2895499248 765
47 iso_pu_bacteria 2895511927 2895512269 765
48 iso_pu_bacteria 2895522137 2895522279 765
49 iso_pu_bacteria 2895525241 2895527277 765
50 iso_pu_bacteria 2919089067 2919091169 765
51 iso_pu_bacteria 2919134579 2919136796 765
52 iso_pu_bacteria 2928496128 2928497802 765
53 iso_pu_bacteria 2931380184 2931381395 765
54 iso_pu_bacteria 2937610967 2937611781 765
55 iso_pu_bacteria 2939626828 2939627720 765
56 iso_pu_bacteria 2961047084 2961047725 765
57 iso_pu_bacteria 2961064222 2961067066 765
58 3300002773 JGI25152J39213_1000018 JGI25152J39213_100001884 766
59 3300002774 JGI25150J39212_1000159 JGI25150J39212_100015927 766
60 3300003187 JGI25151J46595_10000111 JGI25151J46595_1000011185 766
61 3300003215 JGI25153J46596_10000085 JGI25153J46596_1000008517 766
62 3300003771 Ga0055526_1000328 Ga0055526_10003283 766
63 3300003773 Ga0055537_1000788 Ga0055537_10007888 766
64 3300003784 Ga0055534_1000089 Ga0055534_100008940 766
65 3300003790 Ga0055528_1001461 Ga0055528_10014618 766
66 3300003856 Ga0058692_1000020 Ga0058692_1000020117 766
67 3300005289 Ga0065704_10072941 Ga0065704_100729415 766
68 3300005548 Ga0070665_100065602 Ga0070665_1000656022 766
69 3300009011 Ga0105251_10000010 Ga0105251_10000010100 766
70 3300025245 Ga0207425_1000028 Ga0207425_1000028254 766
71 3300025258 Ga0209129_1000065 Ga0209129_1000065202 766
72 3300025263 Ga0209565_1000014 Ga0209565_1000014391 766
73 3300025263 Ga0209565_1000081 Ga0209565_1000081100 766
74 3300025273 Ga0209673_1000784 Ga0209673_10007843 766
75 3300025291 Ga0209675_1000021 Ga0209675_100002198 766
76 3300025292 Ga0209676_1000203 Ga0209676_100020385 766
77 3300025294 Ga0209025_1000002 Ga0209025_100000218 766
78 3300025295 Ga0209564_1000374 Ga0209564_100037449 766
79 3300025297 Ga0209758_1000003 Ga0209758_100000325 766
80 3300025298 Ga0209050_1000521 Ga0209050_100052111 766
81 3300025298 Ga0209050_1000894 Ga0209050_100089425 766
82 3300025299 Ga0209256_1006390 Ga0209256_10063904 766
83 3300025304 Ga0209257_1000204 Ga0209257_100020490 766
84 3300027312 Ga0209371_1000011 Ga0209371_1000011382 766
85 3300030500 Ga0268256_1000011 Ga0268256_1000011382 766
86 3300038705 Ga0237819_00962 Ga0237819_00962_2455_4875 766
87 3300041459 Ga0451800_0924472 Ga0451800_0924472_2350_4806 766
88 3300041462 Ga0451806_541895 Ga0451806_541895_4030_6486 766
89 3300041486 Ga0451807_2187713 Ga0451807_2187713_638_3094 766
90 3300048920 Ga0496117_0000921 Ga0496117_0000921_5840_8260 766
91 3300048921 Ga0496118_0047246 Ga0496118_0047246_470_2890 766
92 3300048922 Ga0496119_0000320 Ga0496119_0000320_59101_61521 766
93 3300048923 Ga0496120_0000424 Ga0496120_0000424_59192_61612 766
94 3300048925 Ga0496122_0000680 Ga0496122_0000680_5808_8228 766
95 3300048926 Ga0496123_0000226 Ga0496123_0000226_5868_8288 766
96 3300048927 Ga0496124_0000705 Ga0496124_0000705_46487_48907 766
97 3300048929 Ga0496126_0005246 Ga0496126_0005246_7292_9688 766
98 iso_pu_bacteria 2747842501 2748015951 766
99 iso_pu_bacteria 2818991457 2819663654 766
100 iso_pu_bacteria 2852649853 2852651382 766
101 iso_pu_bacteria 2852684882 2852686348 766
102 iso_pu_bacteria 2919130084 2919132466 766
103 iso_pu_bacteria 2929195423 2929197066 766
104 iso_pu_bacteria 2939589442 2939590466 766
105 iso_pu_bacteria 2941475908 2941477686 766
106 iso_pu_bacteria 2974307012 2974309491 766
107 iso_pu_bacteria 2977247770 2977250211 766
108 iso_pu_bacteria 2984514374 2984515297 766
109 iso_pu_bacteria 8021622325 8021624750 766
110 iso_pu_bacteria 8021626552 8021629897 766
111 iso_pu_bacteria 8021648035 8021648564 766
112 3300003856 Ga0058692_1000002 Ga0058692_1000002367 767
113 3300013306 Ga0163162_10000021 Ga0163162_100000215 767
114 3300025292 Ga0209676_1000047 Ga0209676_1000047346 767
115 3300025913 Ga0207695_10083683 Ga0207695_100836831 767
116 3300027312 Ga0209371_1000004 Ga0209371_1000004576 767
117 3300030500 Ga0268256_1000005 Ga0268256_1000005470 767
118 3300031911 Ga0307412_10030668 Ga0307412_100306682 767
119 3300031995 Ga0307409_100080017 Ga0307409_1000800171 767
120 3300032002 Ga0307416_100058775 Ga0307416_1000587752 767
121 iso_pu_bacteria 2576861471 2578459042 767
122 iso_pu_bacteria 2747842428 2747950064 767
123 iso_pu_bacteria 2857442823 2857446534 767
124 iso_pu_bacteria 2939622612 2939622624 767
125 iso_pu_bacteria 8002869464 8002871637 767
126 3300009011 Ga0105251_10009436 Ga0105251_100094362 768
127 3300030742 Ga0316183_1091538 Ga0316183_10915384 768
128 iso_pu_bacteria 2765235840 2765578339 768
129 3300025304 Ga0209257_1000325 Ga0209257_100032560 769
130 3300032004 Ga0307414_10010774 Ga0307414_100107743 769
131 3300032004 Ga0307414_10026551 Ga0307414_100265512 769
132 3300048904 Ga0496101_0017460 Ga0496101_0017460_1580_4150 769
133 3300049571 Ga0501034_0000316 Ga0501034_0000316_38893_41412 769
134 3300032005 Ga0307411_10021805 Ga0307411_100218052 770
135 3300037471 Ga0395905_0067705 Ga0395905_0067705_257_2782 770
136 3300049586 Ga0501070_0038719 Ga0501070_0038719_935_3349 770
137 iso_pu_bacteria 2842780639 2842783600 770
138 3300025304 Ga0209257_1000148 Ga0209257_100014855 771
139 3300032004 Ga0307414_10002064 Ga0307414_100020642 771
140 3300032004 Ga0307414_10043952 Ga0307414_100439522 771
141 3300041404 Ga0439436_0004129 Ga0439436_0004129_1275_3836 771
142 3300041413 Ga0439465_0003682 Ga0439465_0003682_629_3073 771
143 3300046525 Ga0495663_0000292 Ga0495663_0000292_11118_13565 771
144 iso_pu_bacteria 2894414249 2894416092 771
145 3300005334 Ga0068869_100054364 Ga0068869_1000543641 772
146 3300005335 Ga0070666_10000609 Ga0070666_1000060916 772
147 3300005335 Ga0070666_10020374 Ga0070666_100203741 772
148 3300005366 Ga0070659_100039497 Ga0070659_1000394972 772
149 3300005458 Ga0070681_10029893 Ga0070681_100298933 772
150 3300005618 Ga0068864_100060734 Ga0068864_1000607342 772
151 3300005841 Ga0068863_100010080 Ga0068863_1000100807 772
152 3300005843 Ga0068860_100012943 Ga0068860_1000129435 772
153 3300009174 Ga0105241_10002020 Ga0105241_100020208 772
154 3300009177 Ga0105248_10090244 Ga0105248_100902442 772
155 3300009545 Ga0105237_10014390 Ga0105237_100143902 772
156 3300010375 Ga0105239_10044292 Ga0105239_100442922 772
157 3300013100 Ga0157373_10031007 Ga0157373_100310072 772
158 3300013104 Ga0157370_10032171 Ga0157370_100321713 772
159 3300013105 Ga0157369_10001294 Ga0157369_1000129418 772
160 3300013307 Ga0157372_10004810 Ga0157372_100048106 772
161 3300014325 Ga0163163_10000213 Ga0163163_1000021329 772
162 3300014325 Ga0163163_10004231 Ga0163163_100042316 772
163 3300014968 Ga0157379_10010562 Ga0157379_100105626 772
164 3300025903 Ga0207680_10000109 Ga0207680_1000010910 772
165 3300025904 Ga0207647_10004252 Ga0207647_100042527 772
166 3300025911 Ga0207654_10000065 Ga0207654_1000006547 772
167 3300025913 Ga0207695_10000864 Ga0207695_1000086421 772
168 3300025914 Ga0207671_10007197 Ga0207671_100071976 772
169 3300025919 Ga0207657_10000612 Ga0207657_1000061224 772
170 3300025920 Ga0207649_10000780 Ga0207649_1000078016 772
171 3300025924 Ga0207694_10009414 Ga0207694_100094146 772
172 3300026041 Ga0207639_10001133 Ga0207639_100011333 772
173 3300026078 Ga0207702_10010807 Ga0207702_100108076 772
174 3300026116 Ga0207674_10002226 Ga0207674_1000222616 772
175 3300028381 Ga0268264_10036655 Ga0268264_100366552 772
176 3300049571 Ga0501034_0000462 Ga0501034_0000462_1494_3962 772
177 3300049571 Ga0501034_0006178 Ga0501034_0006178_4610_7081 772
178 3300049571 Ga0501034_0044593 Ga0501034_0044593_620_3088 772
179 3300049574 Ga0501038_0010027 Ga0501038_0010027_5821_8292 772
180 3300049580 Ga0501046_0007603 Ga0501046_0007603_6160_8628 772
181 3300049580 Ga0501046_0075116 Ga0501046_0075116_23_2491 772
182 3300049581 Ga0501047_0000349 Ga0501047_0000349_32368_34839 772
183 3300049581 Ga0501047_0000442 Ga0501047_0000442_13862_16330 772
184 3300049581 Ga0501047_0022429 Ga0501047_0022429_33_2501 772
185 3300049583 Ga0501067_0000269 Ga0501067_0000269_20122_22593 772
186 3300049585 Ga0501069_0002562 Ga0501069_0002562_5844_8315 772
187 3300049586 Ga0501070_0008703 Ga0501070_0008703_5852_8323 772
188 3300049586 Ga0501070_0014976 Ga0501070_0014976_3512_5980 772
189 3300049586 Ga0501070_0063255 Ga0501070_0063255_205_2673 772
190 3300049588 Ga0501072_0000955 Ga0501072_0000955_13012_15483 772
191 3300049589 Ga0501073_0000424 Ga0501073_0000424_20590_23061 772
192 3300049590 Ga0501074_0008913 Ga0501074_0008913_3554_6025 772
193 3300049590 Ga0501074_0025772 Ga0501074_0025772_330_2798 772
194 3300049741 Ga0501079_0013861 Ga0501079_0013861_2519_4987 772
195 3300049742 Ga0501080_0000828 Ga0501080_0000828_8335_10806 772
196 3300049742 Ga0501080_0002423 Ga0501080_0002423_11798_14266 772
197 3300049742 Ga0501080_0083430 Ga0501080_0083430_281_2749 772
198 3300049744 Ga0501083_0003137 Ga0501083_0003137_4995_7466 772
199 iso_pu_bacteria 2643221573 2643879554 772
200 iso_pu_bacteria 2643221720 2644662835 772
201 iso_pu_bacteria 2643221728 2644698210 772
202 3300013296 Ga0157374_10057871 Ga0157374_100578713 773
203 3300013297 Ga0157378_10000619 Ga0157378_100006197 773
204 3300031730 Ga0307516_10013364 Ga0307516_100133646 773
205 3300039437 Ga0436365_0637659 Ga0436365_0637659_199_2715 773
206 3300042007 Ga0439449_0002776 Ga0439449_0002776_236_2818 773
207 3300049570 Ga0501033_0001637 Ga0501033_0001637_11100_13574 773
208 3300003771 Ga0055526_1000036 Ga0055526_100003673 774
209 3300003773 Ga0055537_1000083 Ga0055537_100008354 774
210 3300003775 Ga0055524_1000638 Ga0055524_10006389 774
211 3300003784 Ga0055534_1000103 Ga0055534_10001039 774
212 3300003790 Ga0055528_1000004 Ga0055528_1000004218 774
213 3300005289 Ga0065704_10000561 Ga0065704_1000056112 774
214 3300015689 Ga0183360_10001 Ga0183360_100012338 774
215 3300025263 Ga0209565_1000001 Ga0209565_10000011518 774
216 3300025273 Ga0209673_1000001 Ga0209673_10000011518 774
217 3300025291 Ga0209675_1000001 Ga0209675_10000011016 774
218 3300025295 Ga0209564_1000001 Ga0209564_10000011178 774
219 3300025299 Ga0209256_1000002 Ga0209256_1000002376 774
220 3300042006 Ga0439432_005777 Ga0439432_005777_1896_4409 774
221 3300042007 Ga0439449_0010035 Ga0439449_0010035_1023_3536 774
222 3300048929 Ga0496126_0038049 Ga0496126_0038049_453_2933 774
223 iso_pu_bacteria 2643221579 2643905665 774
224 iso_pu_bacteria 2643221581 2643913207 774
225 iso_pu_bacteria 2643221695 2644528755 774
226 iso_pu_bacteria 2923516293 2923517766 774
227 iso_pu_bacteria 2941489479 2941489643 774
228 iso_pu_bacteria 2995948881 2995950818 774
229 3300003187 JGI25151J46595_10000253 JGI25151J46595_1000025331 775
230 3300014497 Ga0182008_10010784 Ga0182008_100107843 775
231 3300025294 Ga0209025_1000015 Ga0209025_1000015134 775
232 iso_pu_bacteria 2643221593 2643974439 775
233 3300003771 Ga0055526_1008530 Ga0055526_10085303 776
234 3300003791 Ga0055530_10004028 Ga0055530_100040288 776
235 3300025294 Ga0209025_1005054 Ga0209025_10050548 776
236 3300025295 Ga0209564_1006375 Ga0209564_10063754 776
237 3300025298 Ga0209050_1000579 Ga0209050_100057934 776
238 3300025303 Ga0209051_1004055 Ga0209051_10040553 776
239 iso_pu_bacteria 2571042365 2572253413 776
240 iso_pu_bacteria 2919513703 2919515888 776
241 iso_pu_bacteria 2919675420 2919677278 776
242 iso_pu_bacteria 2987605356 2987608256 776
243 iso_pu_bacteria 8003014200 8003014786 776
244 3300005347 Ga0070668_100014686 Ga0070668_1000146864 777
245 3300005355 Ga0070671_100015755 Ga0070671_1000157555 778
246 3300037418 Ga0395900_0012265 Ga0395900_0012265_917_3439 778
247 3300037471 Ga0395905_0068326 Ga0395905_0068326_708_3230 778
248 3300038443 Ga0395901_0006445 Ga0395901_0006445_7528_10050 778
249 3300047318 Ga0495636_0000787 Ga0495636_0000787_2185_4704 778
250 3300048915 Ga0496112_0096504 Ga0496112_0096504_179_2701 778
251 3300048916 Ga0496113_0009906 Ga0496113_0009906_3455_5977 778
252 3300049586 Ga0501070_0002554 Ga0501070_0002554_8920_11391 781
253 3300049587 Ga0501071_0015063 Ga0501071_0015063_288_2759 781
254 3300049589 Ga0501073_0016696 Ga0501073_0016696_1170_3641 781
255 3300049590 Ga0501074_0010656 Ga0501074_0010656_605_3076 781
256 3300049742 Ga0501080_0007133 Ga0501080_0007133_6527_8938 781
257 3300049823 Ga0501044_0016358 Ga0501044_0016358_1715_4186 781
258 3300001979 JGI24740J21852_10000870 JGI24740J21852_100008703 803
259 3300004803 Ga0058862_10036726 Ga0058862_100367261 803
260 3300005337 Ga0070682_100001082 Ga0070682_10000108210 803
261 3300005341 Ga0070691_10030169 Ga0070691_100301691 803
262 3300005457 Ga0070662_100003343 Ga0070662_1000033434 803
263 3300005458 Ga0070681_10000613 Ga0070681_1000061319 803
264 3300005458 Ga0070681_10061872 Ga0070681_100618721 803
265 3300005530 Ga0070679_100000184 Ga0070679_10000018413 803
266 3300005530 Ga0070679_100000533 Ga0070679_1000005338 803
267 3300005535 Ga0070684_100027394 Ga0070684_1000273943 803
268 3300005546 Ga0070696_100007448 Ga0070696_1000074481 803
269 3300005547 Ga0070693_100003431 Ga0070693_1000034314 803
270 3300005563 Ga0068855_100003226 Ga0068855_1000032268 803
271 3300005564 Ga0070664_100005629 Ga0070664_1000056292 803
272 3300005578 Ga0068854_100038704 Ga0068854_1000387041 803
273 3300005614 Ga0068856_100020259 Ga0068856_1000202596 803
274 3300009093 Ga0105240_10031291 Ga0105240_100312912 803
275 3300009174 Ga0105241_10008562 Ga0105241_100085626 803
276 3300009551 Ga0105238_10052350 Ga0105238_100523502 803
277 3300013104 Ga0157370_10001400 Ga0157370_100014008 803
278 3300013104 Ga0157370_10068771 Ga0157370_100687712 803
279 3300013307 Ga0157372_10002348 Ga0157372_100023488 803
280 3300013307 Ga0157372_10099702 Ga0157372_100997022 803
281 3300025321 Ga0207656_10003593 Ga0207656_100035934 803
282 3300025904 Ga0207647_10004858 Ga0207647_100048586 803
283 3300025909 Ga0207705_10000869 Ga0207705_100008692 803
284 3300025909 Ga0207705_10001104 Ga0207705_1000110416 803
285 3300025912 Ga0207707_10000070 Ga0207707_1000007081 803
286 3300025912 Ga0207707_10000274 Ga0207707_100002748 803
287 3300025912 Ga0207707_10001746 Ga0207707_1000174611 803
288 3300025913 Ga0207695_10002402 Ga0207695_1000240220 803
289 3300025913 Ga0207695_10007210 Ga0207695_100072106 803
290 3300025917 Ga0207660_10000278 Ga0207660_1000027818 803
291 3300025919 Ga0207657_10000829 Ga0207657_100008292 803
292 3300025919 Ga0207657_10008630 Ga0207657_100086308 803
293 3300025920 Ga0207649_10002531 Ga0207649_100025317 803
294 3300025921 Ga0207652_10000078 Ga0207652_1000007824 803
295 3300025921 Ga0207652_10000209 Ga0207652_1000020917 803
296 3300025921 Ga0207652_10000552 Ga0207652_1000055211 803
297 3300025924 Ga0207694_10013912 Ga0207694_100139124 803
298 3300025932 Ga0207690_10000371 Ga0207690_1000037111 803
299 3300025932 Ga0207690_10004234 Ga0207690_100042342 803
300 3300025933 Ga0207706_10007015 Ga0207706_100070154 803
301 3300025944 Ga0207661_10001075 Ga0207661_1000107511 803
302 3300025949 Ga0207667_10000740 Ga0207667_1000074019 803
303 3300025949 Ga0207667_10006026 Ga0207667_100060269 803
304 3300025981 Ga0207640_10004868 Ga0207640_100048686 803
305 3300026041 Ga0207639_10001121 Ga0207639_100011212 803
306 3300026041 Ga0207639_10001582 Ga0207639_1000158211 803
307 3300026067 Ga0207678_10000588 Ga0207678_1000058823 803
308 3300026067 Ga0207678_10005747 Ga0207678_100057478 803
309 3300026116 Ga0207674_10000973 Ga0207674_1000097321 803
310 3300026142 Ga0207698_10001297 Ga0207698_100012978 803
311 3300026142 Ga0207698_10001673 Ga0207698_100016735 803
312 3300037418 Ga0395900_0010725 Ga0395900_0010725_2237_4648 803
313 3300037466 Ga0395898_0045617 Ga0395898_0045617_186_2597 803
314 3300037466 Ga0395898_0052276 Ga0395898_0052276_419_2830 803
315 3300038443 Ga0395901_0016767 Ga0395901_0016767_4380_6791 803
316 3300049581 Ga0501047_0011035 Ga0501047_0011035_1520_3934 804
317 3300049585 Ga0501069_0002152 Ga0501069_0002152_5226_7769 804
318 3300049586 Ga0501070_0035109 Ga0501070_0035109_358_2772 804
319 3300049742 Ga0501080_0004456 Ga0501080_0004456_6136_8550 804
320 3300001904 JGI24736J21556_1002446 JGI24736J21556_10024462 805
321 3300001915 JGI24741J21665_1000761 JGI24741J21665_10007619 805
322 3300001979 JGI24740J21852_10000728 JGI24740J21852_100007287 805
323 3300001979 JGI24740J21852_10011047 JGI24740J21852_100110471 805
324 3300005327 Ga0070658_10074533 Ga0070658_100745331 805
325 3300005329 Ga0070683_100004407 Ga0070683_10000440711 805
326 3300005339 Ga0070660_100006001 Ga0070660_1000060012 805
327 3300005341 Ga0070691_10010963 Ga0070691_100109632 805
328 3300005341 Ga0070691_10013671 Ga0070691_100136712 805
329 3300005344 Ga0070661_100003231 Ga0070661_10000323110 805
330 3300005344 Ga0070661_100046283 Ga0070661_1000462832 805
331 3300005345 Ga0070692_10000184 Ga0070692_100001847 805
332 3300005366 Ga0070659_100008642 Ga0070659_1000086427 805
333 3300005530 Ga0070679_100000311 Ga0070679_10000031117 805
334 3300005535 Ga0070684_100033899 Ga0070684_1000338992 805
335 3300005539 Ga0068853_100013956 Ga0068853_1000139561 805
336 3300005546 Ga0070696_100008590 Ga0070696_1000085906 805
337 3300005563 Ga0068855_100038184 Ga0068855_1000381845 805
338 3300005578 Ga0068854_100015818 Ga0068854_1000158182 805
339 3300005616 Ga0068852_100078250 Ga0068852_1000782501 805
340 3300009093 Ga0105240_10030045 Ga0105240_100300456 805
341 3300009093 Ga0105240_10042623 Ga0105240_100426231 805
342 3300013102 Ga0157371_10004042 Ga0157371_100040427 805
343 3300013102 Ga0157371_10006377 Ga0157371_100063772 805
344 3300013105 Ga0157369_10011967 Ga0157369_100119676 805
345 3300013105 Ga0157369_10027197 Ga0157369_100271972 805
346 3300013307 Ga0157372_10020999 Ga0157372_100209992 805
347 3300020077 Ga0206351_10052898 Ga0206351_100528984 805
348 3300020078 Ga0206352_10329496 Ga0206352_103294961 805
349 3300020080 Ga0206350_11487973 Ga0206350_114879732 805
350 3300020081 Ga0206354_10464072 Ga0206354_104640722 805
351 3300022467 Ga0224712_10005008 Ga0224712_100050082 805
352 3300025904 Ga0207647_10001297 Ga0207647_100012977 805
353 3300025904 Ga0207647_10021502 Ga0207647_100215022 805
354 3300025909 Ga0207705_10001251 Ga0207705_1000125112 805
355 3300025909 Ga0207705_10001521 Ga0207705_100015218 805
356 3300025912 Ga0207707_10000167 Ga0207707_1000016728 805
357 3300025912 Ga0207707_10000296 Ga0207707_1000029625 805
358 3300025912 Ga0207707_10004993 Ga0207707_1000499311 805
359 3300025913 Ga0207695_10003863 Ga0207695_1000386312 805
360 3300025913 Ga0207695_10004260 Ga0207695_1000426010 805
361 3300025917 Ga0207660_10001582 Ga0207660_100015827 805
362 3300025917 Ga0207660_10005619 Ga0207660_100056192 805
363 3300025919 Ga0207657_10006199 Ga0207657_1000619912 805
364 3300025919 Ga0207657_10007382 Ga0207657_100073822 805
365 3300025920 Ga0207649_10022512 Ga0207649_100225122 805
366 3300025921 Ga0207652_10001361 Ga0207652_100013619 805
367 3300025921 Ga0207652_10001550 Ga0207652_1000155018 805
368 3300025921 Ga0207652_10001758 Ga0207652_1000175811 805
369 3300025949 Ga0207667_10002819 Ga0207667_1000281910 805
370 3300025949 Ga0207667_10008371 Ga0207667_100083712 805
371 3300025981 Ga0207640_10000264 Ga0207640_1000026423 805
372 3300025981 Ga0207640_10001219 Ga0207640_100012197 805
373 3300026041 Ga0207639_10004509 Ga0207639_100045091 805
374 3300026041 Ga0207639_10010170 Ga0207639_100101706 805
375 3300026067 Ga0207678_10004744 Ga0207678_100047442 805
376 3300026067 Ga0207678_10007579 Ga0207678_100075798 805
377 3300026078 Ga0207702_10003555 Ga0207702_1000355513 805
378 3300026116 Ga0207674_10002862 Ga0207674_100028627 805
379 3300026116 Ga0207674_10020465 Ga0207674_100204656 805
380 3300026142 Ga0207698_10001013 Ga0207698_100010139 805
381 3300049589 Ga0501073_0014983 Ga0501073_0014983_383_2800 805

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07244

POTRA

Surface antigen variable number repeat

322

400

0.98

PF01103

Omp85

Omp85 superfamily domain

504

863

0.97

PF07244

POTRA

Surface antigen variable number repeat

231

319

0.97

PF07244

POTRA

Surface antigen variable number repeat

403

477

0.95

PF07244

POTRA

Surface antigen variable number repeat

148

228

0.95

PF07244

POTRA

Surface antigen variable number repeat

80

147

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
3q6b-assembly1.cif.gz_A the high-resolution and new form crystal structure of bama potra4-5 from e.coli 0.926 267 421
4xga-assembly1.cif.gz_B crystal structure of bamb and bama p3-5 complex from e.coli 0.9214 176 349
3q6b-assembly1.cif.gz_A the high-resolution and new form crystal structure of bama potra4-5 from e.coli 0.9204 267 421
6izs-assembly1.cif.gz_A crystal structure of haemophilus influenzae bama potra4 0.9203 267 347
4xga-assembly1.cif.gz_B crystal structure of bamb and bama p3-5 complex from e.coli 0.9163 176 349
ID Description Score Start End Superfamily
4k3bA02 Alpha Beta;Roll;Ubiquitin-like (UB roll);membrane protein fhac 0.9702 92 175 3.10.20.310
4k3bA02 Alpha Beta;Roll;Ubiquitin-like (UB roll);membrane protein fhac 0.9591 92 175 3.10.20.310
4k3bA03 Alpha Beta;Roll;Ubiquitin-like (UB roll);membrane protein fhac 0.959 176 267 3.10.20.310
4k3bA01 Alpha Beta;Roll;Ubiquitin-like (UB roll);membrane protein fhac 0.9492 24 91 3.10.20.310
4k3bA03 Alpha Beta;Roll;Ubiquitin-like (UB roll);membrane protein fhac 0.9491 176 267 3.10.20.310
ID Description Score Start End GO Terms
AF-A0A7C3GYX3-F1-model_v4 Outer membrane protein assembly factor BamA 0.9266 463 805 GO:0043165
GO:0051205
GO:1990063
AF-A0A7V7T2Y2-F1-model_v4 Outer membrane protein assembly factor BamA 0.9192 15 213 GO:0019867
AF-A0A4V2B1Z6-F1-model_v4 Outer membrane protein assembly factor BamA 0.9164 665 805 GO:0019867
AF-A0A227J233-F1-model_v4 POTRA domain-containing protein 0.9162 243 343 GO:0019867
AF-A0A7C3GYX3-F1-model_v4 Outer membrane protein assembly factor BamA 0.9118 463 805 GO:0043165
GO:0051205
GO:1990063

Feature Viewer

pLDDT pTM Quality
80.71 0.59 Medium
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Predicted Structure (AlphaFold2)

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