F425209

General Info

Members Datasets Scaffolds Average Seq Length
369 188 738 195

Family's Representative Sequence

Representative Sequence 3300050510|nmdc:mga06r32_123973_c1|nmdc:mga06r32_123973_c1_185_898
Length 237
Sequence MATEAIPNTMTEIASSGFRHYRTSTLLAMTVNRKSKIKNRKSLMAQFTTLTSRVVPLPVNDIDTDQIIPARFLKATDKNGMGDNLFADWRYNADGSPKADFVLNKSESKGAQILLAGDNFGCGSSREHAPWALTGFGFRAVISTSFADIFRNNALKNGLIPIIVDEETHKMLFDLVEEAPRAELTVDLATQTVSFAGGSFTFPIDRFNKTCLLNGVDELGYIMGFEKDIATFEANLT

Samples

Sample ID Description Type Environment
1 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
2 2162886006 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v1 Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
7 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
8 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
9 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
10 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
11 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
12 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
13 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
14 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
15 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
16 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
19 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
22 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
23 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
24 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
25 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
28 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
29 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
30 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
31 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
32 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
33 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
34 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
35 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
36 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
37 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
38 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
39 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
40 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
41 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
42 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
45 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
46 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
47 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
48 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
51 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
52 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
54 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
55 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
56 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
57 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
58 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
59 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
60 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
61 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
62 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
63 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
64 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
89 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
90 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
91 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
92 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
93 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
94 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
95 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
96 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
97 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
98 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
99 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
100 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
101 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
102 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
103 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
104 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
105 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
106 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
107 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
108 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
109 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
110 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
111 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
112 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
113 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
114 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
115 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
116 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
117 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
118 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
119 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
120 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
121 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
122 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
123 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
124 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
125 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
126 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
127 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
128 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
129 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
130 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
131 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
132 3300041463 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_7 MetaG Metagenome Rhizoplane
133 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
134 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
135 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
136 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
137 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
138 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
139 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
140 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
141 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
142 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
143 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
144 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
145 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
146 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
147 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
148 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
149 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
150 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
151 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
152 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
153 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
154 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
155 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
156 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
166 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
167 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
168 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
169 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
170 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
171 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
172 3300049650 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_A_0_drought Metagenome Rhizosphere
173 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
174 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
175 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
176 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
177 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
178 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
179 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
180 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
181 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
182 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
183 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
184 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
185 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
186 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
187 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
188 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.29
Metatranscriptomes 2.71
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.81
Nodule 0
Rhizoplane 3.25
Rhizosphere 94.31
Stem 0
Stem Tuber 0
Unclassified 0.81

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga06r32_123973_c1 3300050510 Bacteria 2550
2 SwRhRL3b_contig_4210719 2162886006 Bacteria 1173
3 JGI24739J22299_10079014 3300001989 Bacteria 1013
4 JGI25406J46586_10025177 3300003203 Bacteria 2314
5 JGI25406J46586_10058986 3300003203 Bacteria 1248
6 rootH1_10034236 3300003323 Bacteria 3502
7 Ga0055527_1010604 3300003760 Bacteria 1062
8 Ga0058692_1000045 3300003856 Bacteria 115083
9 Ga0065704_10000976 3300005289 Bacteria 11643
10 Ga0065704_10089665 3300005289 Bacteria 2841
11 Ga0065712_10400211 3300005290 Bacteria 732
12 Ga0065707_10000488 3300005295 Bacteria 36380
13 Ga0065707_10104352 3300005295 Bacteria 2700
14 Ga0070683_100012867 3300005329 Bacteria 7282
15 Ga0070680_100766631 3300005336 Bacteria 831
16 Ga0068868_100325930 3300005338 Bacteria 1309
17 Ga0070660_100344835 3300005339 Bacteria 1226
18 Ga0070689_100001679 3300005340 Bacteria 14139
19 Ga0070689_100068641 3300005340 Bacteria 2765
20 Ga0070689_100250052 3300005340 Bacteria 1462
21 Ga0070687_100325482 3300005343 Bacteria 984
22 Ga0070671_100174190 3300005355 Bacteria 1820
23 Ga0070673_100000221 3300005364 Bacteria 28519
24 Ga0070688_100058030 3300005365 Bacteria 2436
25 Ga0070667_100000028 3300005367 Bacteria 180376
26 Ga0070714_100111002 3300005435 Bacteria 2428
27 Ga0070705_100058829 3300005440 Bacteria 2273
28 Ga0070700_100770857 3300005441 Bacteria 772
29 Ga0070694_100151896 3300005444 Bacteria 1692
30 Ga0070694_100194200 3300005444 Bacteria 1509
31 Ga0070681_10093543 3300005458 Bacteria 2955
32 Ga0070681_10420681 3300005458 Bacteria 1248
33 Ga0068867_100455724 3300005459 Bacteria 1091
34 Ga0070706_100581313 3300005467 Bacteria 1041
35 Ga0070698_100037778 3300005471 Bacteria 4978
36 Ga0070698_100130876 3300005471 Bacteria 2464
37 Ga0070698_100314414 3300005471 Bacteria 1497
38 Ga0070699_100010311 3300005518 Bacteria 8080
39 Ga0070699_100020337 3300005518 Bacteria 5724
40 Ga0070699_100059928 3300005518 Bacteria 3297
41 Ga0070699_100135126 3300005518 Bacteria 2176
42 Ga0070699_100573802 3300005518 Bacteria 1028
43 Ga0070679_100524772 3300005530 Bacteria 1128
44 Ga0070679_100578833 3300005530 Bacteria 1066
45 Ga0070684_100089888 3300005535 Bacteria 2729
46 Ga0070697_100751152 3300005536 Bacteria 862
47 Ga0070696_100079639 3300005546 Bacteria 2318
48 Ga0070696_100137217 3300005546 Bacteria 1784
49 Ga0070696_100265566 3300005546 Bacteria 1303
50 Ga0070665_100123786 3300005548 Bacteria 2588
51 Ga0070665_100421993 3300005548 Bacteria 1343
52 Ga0070704_100102230 3300005549 Bacteria 2162
53 Ga0070704_100550464 3300005549 Bacteria 1008
54 Ga0068857_100539371 3300005577 Bacteria 1098
55 Ga0068859_100014208 3300005617 Bacteria 7985
56 Ga0068859_100200934 3300005617 Bacteria 2078
57 Ga0068864_100074800 3300005618 Bacteria 2956
58 Ga0068870_10090785 3300005840 Bacteria 1707
59 Ga0068862_100021308 3300005844 Bacteria 5415
60 Ga0068862_100756164 3300005844 Bacteria 946
61 Ga0081539_10008956 3300005985 Bacteria 8522
62 Ga0081539_10019725 3300005985 Bacteria 4599
63 Ga0068871_100363898 3300006358 Bacteria 1282
64 Ga0075428_100071282 3300006844 Bacteria 3798
65 Ga0075428_100606760 3300006844 Unclassified 1169
66 Ga0075430_100080673 3300006846 Bacteria 2725
67 Ga0075431_100085673 3300006847 Bacteria 3252
68 Ga0075433_10247264 3300006852 Bacteria 1583
69 Ga0075434_100570813 3300006871 Bacteria 1151
70 Ga0075429_100033557 3300006880 Bacteria 4461
71 Ga0075429_100123201 3300006880 Bacteria 2267
72 Ga0075429_100150766 3300006880 Bacteria 2036
73 Ga0075429_100681669 3300006880 Unclassified 900
74 Ga0075429_100889218 3300006880 Bacteria 779
75 Ga0097620_100014208 3300006931 Bacteria 7985
76 Ga0097620_100200938 3300006931 Bacteria 2078
77 Ga0105240_10056918 3300009093 Bacteria 4889
78 Ga0105240_10111925 3300009093 Bacteria 3301
79 Ga0105247_10020430 3300009101 Bacteria 3982
80 Ga0114129_10008846 3300009147 Bacteria 14368
81 Ga0114129_10017172 3300009147 Bacteria 10306
82 Ga0114129_10070201 3300009147 Bacteria 4884
83 Ga0114129_10222871 3300009147 Bacteria 2543
84 Ga0114129_10456181 3300009147 Bacteria 1676
85 Ga0114129_10741874 3300009147 Bacteria 1258
86 Ga0105243_10002867 3300009148 Bacteria 14298
87 Ga0105243_10150206 3300009148 Bacteria 1998
88 Ga0105242_10634618 3300009176 Bacteria 1037
89 Ga0105237_10002953 3300009545 Bacteria 20583
90 Ga0105237_10454192 3300009545 Bacteria 1287
91 Ga0105249_10028488 3300009553 Bacteria 5041
92 Ga0105249_10045706 3300009553 Bacteria 3983
93 Ga0105249_10056687 3300009553 Bacteria 3587
94 Ga0105249_10791604 3300009553 Bacteria 1012
95 Ga0105239_10228258 3300010375 Bacteria 2089
96 Ga0105246_10207435 3300011119 Bacteria 1527
97 Ga0157374_10753515 3300013296 Bacteria 988
98 Ga0157372_11851459 3300013307 Bacteria 694
99 Ga0157375_10614421 3300013308 Bacteria 1245
100 Ga0157375_12446040 3300013308 Bacteria 623
101 Ga0163163_10597182 3300014325 Bacteria 1167
102 Ga0157377_10767546 3300014745 Bacteria 707
103 Ga0209566_100963 3300025225 Bacteria 12794
104 Ga0209455_1005276 3300025272 Bacteria 4031
105 Ga0207710_10010969 3300025900 Bacteria 3817
106 Ga0207643_10095235 3300025908 Bacteria 1740
107 Ga0207684_10618946 3300025910 Bacteria 924
108 Ga0207695_10014217 3300025913 Bacteria 9441
109 Ga0207671_10487657 3300025914 Bacteria 982
110 Ga0207660_10521861 3300025917 Bacteria 965
111 Ga0207662_10414973 3300025918 Bacteria 915
112 Ga0207659_10103461 3300025926 Bacteria 2152
113 Ga0207709_10067946 3300025935 Bacteria 2251
114 Ga0207670_10017956 3300025936 Bacteria 4287
115 Ga0207670_10317061 3300025936 Bacteria 1226
116 Ga0207661_10014027 3300025944 Bacteria 5863
117 Ga0207651_10060217 3300025960 Bacteria 2634
118 Ga0207712_10266827 3300025961 Bacteria 1391
119 Ga0207658_10001088 3300025986 Bacteria 21940
120 Ga0207703_10115069 3300026035 Bacteria 2301
121 Ga0207703_10309336 3300026035 Bacteria 1444
122 Ga0207648_10024615 3300026089 Bacteria 5370
123 Ga0207676_10150315 3300026095 Bacteria 2005
124 Ga0207674_10425260 3300026116 Bacteria 1283
125 Ga0207675_100392753 3300026118 Bacteria 1366
126 Ga0207683_10348049 3300026121 Bacteria 1360
127 Ga0268266_10018527 3300028379 Bacteria 5933
128 Ga0268265_10033927 3300028380 Bacteria 3715
129 Ga0268265_10155745 3300028380 Bacteria 1933
130 Ga0268265_10304541 3300028380 Bacteria 1436
131 Ga0268265_10637502 3300028380 Bacteria 1023
132 Ga0265318_10001824 3300028577 Bacteria 12069
133 Ga0265338_10044729 3300028800 Bacteria 4082
134 Ga0265324_10081787 3300029957 Bacteria 1099
135 Ga0265332_10163751 3300031238 Bacteria 929
136 Ga0265320_10014882 3300031240 Bacteria 4412
137 Ga0265320_10184872 3300031240 Bacteria 933
138 Ga0265340_10004347 3300031247 Bacteria 7937
139 Ga0265316_10123510 3300031344 Bacteria 1954
140 Ga0307509_10288257 3300031507 Bacteria 1398
141 Ga0316575_10060315 3300031665 Bacteria 1515
142 Ga0316575_10151141 3300031665 Bacteria 958
143 Ga0316579_10000054 3300031691 Bacteria 27557
144 Ga0316579_10028761 3300031691 Bacteria 2532
145 Ga0316579_10040799 3300031691 Bacteria 2154
146 Ga0265342_10372935 3300031712 Bacteria 740
147 Ga0316576_10000200 3300031727 Bacteria 25128
148 Ga0316576_10018265 3300031727 Bacteria 4784
149 Ga0316576_10020339 3300031727 Bacteria 4566
150 Ga0316576_10077373 3300031727 Bacteria 2463
151 Ga0316576_10118460 3300031727 Bacteria 1988
152 Ga0316576_10378934 3300031727 Bacteria 1050
153 Ga0316578_10023687 3300031728 Bacteria 3437
154 Ga0316578_10054311 3300031728 Bacteria 2349
155 Ga0316578_10191162 3300031728 Bacteria 1233
156 Ga0316577_10007019 3300031733 Bacteria 5988
157 Ga0316577_10045102 3300031733 Bacteria 2464
158 Ga0316577_10072986 3300031733 Bacteria 1916
159 Ga0316577_10163823 3300031733 Bacteria 1254
160 Ga0307413_10034795 3300031824 Bacteria 2883
161 Ga0307410_10082930 3300031852 Bacteria 2256
162 Ga0307407_10115178 3300031903 Bacteria 1694
163 Ga0307407_10579513 3300031903 Bacteria 833
164 Ga0307409_101809877 3300031995 Bacteria 640
165 Ga0307414_10246211 3300032004 Bacteria 1483
166 Ga0307415_100300133 3300032126 Bacteria 1330
167 Ga0316583_10000199 3300032133 Bacteria 15686
168 Ga0316585_10003045 3300032137 Bacteria 4578
169 Ga0316585_10018575 3300032137 Bacteria 2111
170 Ga0316585_10036264 3300032137 Bacteria 1563
171 Ga0316580_10000042 3300032139 Bacteria 19292
172 Ga0316580_10020119 3300032139 Bacteria 2054
173 Ga0316580_10072437 3300032139 Bacteria 1055
174 Ga0316593_10000222 3300032168 Bacteria 9012
175 Ga0316593_10003988 3300032168 Bacteria 3733
176 Ga0316593_10162124 3300032168 Bacteria 817
177 Ga0316593_10164679 3300032168 Bacteria 811
178 Ga0316592_1000061 3300033524 Bacteria 9698
179 Ga0316592_1001090 3300033524 Bacteria 4237
180 Ga0316592_1002019 3300033524 Bacteria 3435
181 Ga0316596_1000131 3300033541 Bacteria 10056
182 Ga0316596_1013991 3300033541 Bacteria 1984
183 Ga0316596_1044624 3300033541 Bacteria 1168
184 Ga0373950_0000001 3300034818 Bacteria 1001987
185 Ga0373950_0000034 3300034818 Bacteria 143669
186 Ga0373934_0054594 3300035086 Bacteria 1586
187 Ga0373934_0126583 3300035086 Bacteria 1041
188 Ga0373923_0247144 3300035111 Bacteria 834
189 Ga0373923_0672903 3300035111 Bacteria 513
190 Ga0373941_0075009 3300035115 Bacteria 1131
191 Ga0373954_0104686 3300035118 Bacteria 1366
192 Ga0373956_0123180 3300035119 Bacteria 1211
193 Ga0373957_0161327 3300035120 Bacteria 924
194 Ga0373955_0189829 3300035172 Bacteria 1221
195 Ga0373955_0233124 3300035172 Bacteria 1101
196 Ga0373955_0236284 3300035172 Bacteria 1094
197 Ga0373955_0349505 3300035172 Bacteria 895
198 Ga0316574_0000158 3300035398 Bacteria 22021
199 Ga0316574_0000333 3300035398 Bacteria 18158
200 Ga0316574_0031787 3300035398 Bacteria 3203
201 Ga0316574_0105259 3300035398 Bacteria 1807
202 Ga0316574_0134607 3300035398 Bacteria 1591
203 Ga0316574_0151320 3300035398 Bacteria 1495
204 Ga0316574_0189711 3300035398 Bacteria 1322
205 Ga0316574_0255761 3300035398 Bacteria 1119
206 Ga0373927_0001135 3300035695 Bacteria 20156
207 Ga0373933_0001077 3300035724 Bacteria 16453
208 Ga0373933_0123757 3300035724 Bacteria 1621
209 Ga0373933_0199275 3300035724 Bacteria 1281
210 Ga0373937_0004674 3300036401 Bacteria 11633
211 Ga0373937_0006717 3300036401 Bacteria 9924
212 Ga0373937_0147473 3300036401 Bacteria 2203
213 Ga0316582_0000234 3300036647 Bacteria 18380
214 Ga0316582_0057248 3300036647 Bacteria 2490
215 Ga0316582_0071547 3300036647 Bacteria 2246
216 Ga0316582_0524783 3300036647 Bacteria 816
217 Ga0316582_0595177 3300036647 Bacteria 761
218 Ga0316584_0000369 3300036712 Bacteria 23172
219 Ga0316584_0005323 3300036712 Bacteria 8619
220 Ga0316584_0028105 3300036712 Bacteria 4144
221 Ga0316584_0062595 3300036712 Bacteria 2786
222 Ga0316584_0284224 3300036712 Bacteria 1201
223 Ga0395898_0056829 3300037466 Bacteria 3813
224 Ga0400484_00507 3300038725 Bacteria 2430
225 Ga0400490_07100 3300038726 Bacteria 8381
226 Ga0451793_0721146 3300041452 Bacteria 2915
227 Ga0451804_0028138 3300041463 Bacteria 3040
228 Ga0451837_0736930 3300041494 Bacteria 888
229 Ga0451577_0000770 3300042876 Bacteria 48404
230 Ga0451577_0018252 3300042876 Bacteria 6465
231 Ga0451577_0020435 3300042876 Bacteria 6077
232 Ga0451577_0021002 3300042876 Bacteria 5984
233 Ga0451577_0027328 3300042876 Bacteria 5164
234 Ga0451577_0041448 3300042876 Bacteria 4132
235 Ga0451577_0101674 3300042876 Bacteria 2568
236 Ga0451577_0540082 3300042876 Bacteria 1058
237 Ga0451577_0626100 3300042876 Bacteria 976
238 Ga0466972_0000812 3300044658 Bacteria 14908
239 Ga0453683_0000448 3300044673 Bacteria 47323
240 Ga0453683_0002533 3300044673 Bacteria 14103
241 Ga0453683_0092331 3300044673 Bacteria 1898
242 Ga0453683_0098373 3300044673 Bacteria 1837
243 Ga0453683_0132845 3300044673 Bacteria 1569
244 Ga0453683_0243872 3300044673 Bacteria 1145
245 Ga0453683_0425230 3300044673 Bacteria 857
246 Ga0466965_0005816 3300044683 Bacteria 5565
247 Ga0453684_0000007 3300044712 Bacteria 1301482
248 Ga0453684_0000895 3300044712 Bacteria 99507
249 Ga0453684_0001770 3300044712 Bacteria 57649
250 Ga0453684_0004543 3300044712 Bacteria 29069
251 Ga0453684_0006688 3300044712 Bacteria 21751
252 Ga0453684_0009911 3300044712 Bacteria 16444
253 Ga0453684_0010208 3300044712 Bacteria 16104
254 Ga0453684_0012218 3300044712 Bacteria 14225
255 Ga0453684_0013328 3300044712 Bacteria 13378
256 Ga0453684_0024183 3300044712 Bacteria 8894
257 Ga0453684_0030495 3300044712 Bacteria 7616
258 Ga0453684_0034663 3300044712 Bacteria 6997
259 Ga0453684_0053665 3300044712 Bacteria 5259
260 Ga0453684_0054478 3300044712 Bacteria 5209
261 Ga0453684_0096711 3300044712 Bacteria 3627
262 Ga0453684_0102220 3300044712 Bacteria 3505
263 Ga0453684_0119545 3300044712 Bacteria 3184
264 Ga0453684_0160499 3300044712 Bacteria 2660
265 Ga0453684_0205766 3300044712 Bacteria 2291
266 Ga0453684_0213185 3300044712 Bacteria 2243
267 Ga0453684_0238251 3300044712 Bacteria 2096
268 Ga0453684_0304340 3300044712 Bacteria 1811
269 Ga0453684_0338593 3300044712 Bacteria 1699
270 Ga0453684_0417007 3300044712 Bacteria 1500
271 Ga0453684_0575438 3300044712 Bacteria 1238
272 Ga0453684_0579160 3300044712 Bacteria 1233
273 Ga0453684_0594071 3300044712 Bacteria 1214
274 Ga0453684_0679481 3300044712 Bacteria 1121
275 Ga0453684_0731815 3300044712 Bacteria 1072
276 Ga0453684_1001585 3300044712 Bacteria 889
277 Ga0453684_1160668 3300044712 Bacteria 813
278 Ga0453684_1180036 3300044712 Bacteria 805
279 Ga0466968_0004707 3300044735 Bacteria 5113
280 Ga0466960_0001841 3300044901 Bacteria 7783
281 Ga0451576_0000218 3300045051 Bacteria 142018
282 Ga0451576_0002465 3300045051 Bacteria 27543
283 Ga0451576_0003866 3300045051 Bacteria 20083
284 Ga0451576_0012251 3300045051 Bacteria 9653
285 Ga0451576_0149770 3300045051 Bacteria 2433
286 Ga0451576_0232658 3300045051 Bacteria 1925
287 Ga0451576_0388376 3300045051 Bacteria 1463
288 Ga0451576_0482031 3300045051 Bacteria 1303
289 Ga0451576_0560274 3300045051 Bacteria 1201
290 Ga0451576_0909163 3300045051 Bacteria 923
291 Ga0451576_1187850 3300045051 Bacteria 797
292 Ga0451576_1202252 3300045051 Bacteria 791
293 Ga0495580_0120378 3300046472 Bacteria 1822
294 Ga0495606_0001665 3300046507 Bacteria 28878
295 Ga0495630_0574251 3300046517 Bacteria 864
296 Ga0495652_0160541 3300046529 Bacteria 1746
297 Ga0495634_0336049 3300046642 Bacteria 907
298 Ga0495684_0058980 3300047471 Bacteria 2923
299 Ga0496100_0099582 3300048903 Bacteria 2000
300 Ga0496101_0015706 3300048904 Bacteria 5110
301 Ga0496104_0229841 3300048907 Bacteria 1767
302 Ga0496106_0234004 3300048909 Bacteria 1467
303 Ga0496106_0892486 3300048909 Bacteria 702
304 Ga0496109_0542348 3300048912 Bacteria 1097
305 Ga0496114_0000141 3300048917 Bacteria 52346
306 Ga0496114_0008294 3300048917 Bacteria 8232
307 Ga0496115_0000117 3300048918 Bacteria 72413
308 Ga0496115_0091170 3300048918 Bacteria 2491
309 Ga0496125_0096012 3300048928 Bacteria 2203
310 Ga0501032_0188780 3300049569 Bacteria 1347
311 Ga0501032_0858331 3300049569 Bacteria 572
312 Ga0501034_0000081 3300049571 Bacteria 170682
313 Ga0501036_0042977 3300049572 Bacteria 3826
314 Ga0501036_0053612 3300049572 Bacteria 3414
315 Ga0501038_0066669 3300049574 Bacteria 3065
316 Ga0501038_0546136 3300049574 Bacteria 882
317 Ga0501042_0111304 3300049578 Bacteria 1972
318 Ga0501043_0057173 3300049579 Bacteria 3063
319 Ga0501046_0003780 3300049580 Bacteria 13860
320 Ga0501047_0000001 3300049581 Bacteria 658799
321 Ga0501048_0000510 3300049582 Bacteria 27219
322 Ga0501048_0050945 3300049582 Bacteria 2948
323 Ga0501067_0000632 3300049583 Bacteria 18904
324 Ga0501067_0016141 3300049583 Bacteria 4130
325 Ga0501069_0016291 3300049585 Bacteria 3990
326 Ga0501070_0000004 3300049586 Bacteria 254956
327 Ga0501070_0079929 3300049586 Bacteria 2705
328 Ga0501072_0000020 3300049588 Bacteria 156058
329 Ga0501073_0000265 3300049589 Bacteria 34718
330 Ga0501073_0000722 3300049589 Bacteria 23308
331 Ga0501073_0004699 3300049589 Bacteria 10255
332 Ga0501073_0006600 3300049589 Bacteria 8635
333 Ga0501073_0033769 3300049589 Bacteria 3641
334 Ga0501073_0179427 3300049589 Bacteria 1465
335 Ga0501074_0064965 3300049590 Bacteria 2627
336 Ga0501074_0389675 3300049590 Bacteria 988
337 Ga0501076_0212267 3300049592 Bacteria 1582
338 Ga0501199_011029 3300049650 Bacteria 973
339 Ga0501257_014769 3300049686 Bacteria 1800
340 Ga0501079_0000389 3300049741 Bacteria 28316
341 Ga0501080_0007910 3300049742 Bacteria 9631
342 Ga0501080_0177139 3300049742 Bacteria 1964
343 Ga0501083_0000340 3300049744 Bacteria 29664
344 Ga0501083_0182896 3300049744 Bacteria 1368
345 Ga0501280_010542 3300049776 Bacteria 1289
346 Ga0501045_0043219 3300049824 Bacteria 3281
347 Ga0501045_0070978 3300049824 Bacteria 2563
348 nmdc:mga05p37_28338_c1 3300050507 Bacteria 6829
349 nmdc:mga05p37_327612_c1 3300050507 Bacteria 1810
350 nmdc:mga05p37_37084_c1 3300050507 Bacteria 5980
351 nmdc:mga05p37_44710_c1 3300050507 Bacteria 5449
352 nmdc:mga09592_143023_c2 3300050508 Bacteria 1500
353 nmdc:mga09592_183590_c1 3300050508 Bacteria 1810
354 nmdc:mga09592_585131_c1 3300050508 Bacteria 957
355 nmdc:mga0qj67_102012_c1 3300050509 Bacteria 2313
356 nmdc:mga0qj67_435751_c1 3300050509 Unclassified 1056
357 nmdc:mga0qj67_84458_c1 3300050509 Bacteria 2546
358 nmdc:mga08y16_1413175_c1 3300050511 Bacteria 659
359 nmdc:mga0n895_121134_c1 3300050512 Bacteria 2637
360 nmdc:mga0a205_2609_c1 3300050515 Bacteria 15919
361 nmdc:mga0a205_359810_c1 3300050515 Bacteria 1322
362 nmdc:mga0a205_370826_c1 3300050515 Bacteria 1297
363 nmdc:mga0a205_596596_c1 3300050515 Bacteria 958
364 Ga0495601_0102860 3300053077 Bacteria 1846
365 Ga0501084_0000014 3300054114 Bacteria 172170
366 Ga0501082_0000832 3300060353 Bacteria 27150
367 Ga0501082_0031992 3300060353 Bacteria 4538
368 Ga0530510_0036404 3300061734 Bacteria 3547
369 Ga0530510_0461225 3300061734 Bacteria 961
370 nmdc:mga06r32_123973_c1
371 SwRhRL3b_contig_4210719
372 JGI24739J22299_10079014
373 JGI25406J46586_10025177
374 JGI25406J46586_10058986
375 rootH1_10034236
376 Ga0055527_1010604
377 Ga0058692_1000045
378 Ga0065704_10000976
379 Ga0065704_10089665
380 Ga0065712_10400211
381 Ga0065707_10000488
382 Ga0065707_10104352
383 Ga0070683_100012867
384 Ga0070680_100766631
385 Ga0068868_100325930
386 Ga0070660_100344835
387 Ga0070689_100001679
388 Ga0070689_100068641
389 Ga0070689_100250052
390 Ga0070687_100325482
391 Ga0070671_100174190
392 Ga0070673_100000221
393 Ga0070688_100058030
394 Ga0070667_100000028
395 Ga0070714_100111002
396 Ga0070705_100058829
397 Ga0070700_100770857
398 Ga0070694_100151896
399 Ga0070694_100194200
400 Ga0070681_10093543
401 Ga0070681_10420681
402 Ga0068867_100455724
403 Ga0070706_100581313
404 Ga0070698_100037778
405 Ga0070698_100130876
406 Ga0070698_100314414
407 Ga0070699_100010311
408 Ga0070699_100020337
409 Ga0070699_100059928
410 Ga0070699_100135126
411 Ga0070699_100573802
412 Ga0070679_100524772
413 Ga0070679_100578833
414 Ga0070684_100089888
415 Ga0070697_100751152
416 Ga0070696_100079639
417 Ga0070696_100137217
418 Ga0070696_100265566
419 Ga0070665_100123786
420 Ga0070665_100421993
421 Ga0070704_100102230
422 Ga0070704_100550464
423 Ga0068857_100539371
424 Ga0068859_100014208
425 Ga0068859_100200934
426 Ga0068864_100074800
427 Ga0068870_10090785
428 Ga0068862_100021308
429 Ga0068862_100756164
430 Ga0081539_10008956
431 Ga0081539_10019725
432 Ga0068871_100363898
433 Ga0075428_100071282
434 Ga0075428_100606760
435 Ga0075430_100080673
436 Ga0075431_100085673
437 Ga0075433_10247264
438 Ga0075434_100570813
439 Ga0075429_100033557
440 Ga0075429_100123201
441 Ga0075429_100150766
442 Ga0075429_100681669
443 Ga0075429_100889218
444 Ga0097620_100014208
445 Ga0097620_100200938
446 Ga0105240_10056918
447 Ga0105240_10111925
448 Ga0105247_10020430
449 Ga0114129_10008846
450 Ga0114129_10017172
451 Ga0114129_10070201
452 Ga0114129_10222871
453 Ga0114129_10456181
454 Ga0114129_10741874
455 Ga0105243_10002867
456 Ga0105243_10150206
457 Ga0105242_10634618
458 Ga0105237_10002953
459 Ga0105237_10454192
460 Ga0105249_10028488
461 Ga0105249_10045706
462 Ga0105249_10056687
463 Ga0105249_10791604
464 Ga0105239_10228258
465 Ga0105246_10207435
466 Ga0157374_10753515
467 Ga0157372_11851459
468 Ga0157375_10614421
469 Ga0157375_12446040
470 Ga0163163_10597182
471 Ga0157377_10767546
472 Ga0209566_100963
473 Ga0209455_1005276
474 Ga0207710_10010969
475 Ga0207643_10095235
476 Ga0207684_10618946
477 Ga0207695_10014217
478 Ga0207671_10487657
479 Ga0207660_10521861
480 Ga0207662_10414973
481 Ga0207659_10103461
482 Ga0207709_10067946
483 Ga0207670_10017956
484 Ga0207670_10317061
485 Ga0207661_10014027
486 Ga0207651_10060217
487 Ga0207712_10266827
488 Ga0207658_10001088
489 Ga0207703_10115069
490 Ga0207703_10309336
491 Ga0207648_10024615
492 Ga0207676_10150315
493 Ga0207674_10425260
494 Ga0207675_100392753
495 Ga0207683_10348049
496 Ga0268266_10018527
497 Ga0268265_10033927
498 Ga0268265_10155745
499 Ga0268265_10304541
500 Ga0268265_10637502
501 Ga0265318_10001824
502 Ga0265338_10044729
503 Ga0265324_10081787
504 Ga0265332_10163751
505 Ga0265320_10014882
506 Ga0265320_10184872
507 Ga0265340_10004347
508 Ga0265316_10123510
509 Ga0307509_10288257
510 Ga0316575_10060315
511 Ga0316575_10151141
512 Ga0316579_10000054
513 Ga0316579_10028761
514 Ga0316579_10040799
515 Ga0265342_10372935
516 Ga0316576_10000200
517 Ga0316576_10018265
518 Ga0316576_10020339
519 Ga0316576_10077373
520 Ga0316576_10118460
521 Ga0316576_10378934
522 Ga0316578_10023687
523 Ga0316578_10054311
524 Ga0316578_10191162
525 Ga0316577_10007019
526 Ga0316577_10045102
527 Ga0316577_10072986
528 Ga0316577_10163823
529 Ga0307413_10034795
530 Ga0307410_10082930
531 Ga0307407_10115178
532 Ga0307407_10579513
533 Ga0307409_101809877
534 Ga0307414_10246211
535 Ga0307415_100300133
536 Ga0316583_10000199
537 Ga0316585_10003045
538 Ga0316585_10018575
539 Ga0316585_10036264
540 Ga0316580_10000042
541 Ga0316580_10020119
542 Ga0316580_10072437
543 Ga0316593_10000222
544 Ga0316593_10003988
545 Ga0316593_10162124
546 Ga0316593_10164679
547 Ga0316592_1000061
548 Ga0316592_1001090
549 Ga0316592_1002019
550 Ga0316596_1000131
551 Ga0316596_1013991
552 Ga0316596_1044624
553 Ga0373950_0000001
554 Ga0373950_0000034
555 Ga0373934_0054594
556 Ga0373934_0126583
557 Ga0373923_0247144
558 Ga0373923_0672903
559 Ga0373941_0075009
560 Ga0373954_0104686
561 Ga0373956_0123180
562 Ga0373957_0161327
563 Ga0373955_0189829
564 Ga0373955_0233124
565 Ga0373955_0236284
566 Ga0373955_0349505
567 Ga0316574_0000158
568 Ga0316574_0000333
569 Ga0316574_0031787
570 Ga0316574_0105259
571 Ga0316574_0134607
572 Ga0316574_0151320
573 Ga0316574_0189711
574 Ga0316574_0255761
575 Ga0373927_0001135
576 Ga0373933_0001077
577 Ga0373933_0123757
578 Ga0373933_0199275
579 Ga0373937_0004674
580 Ga0373937_0006717
581 Ga0373937_0147473
582 Ga0316582_0000234
583 Ga0316582_0057248
584 Ga0316582_0071547
585 Ga0316582_0524783
586 Ga0316582_0595177
587 Ga0316584_0000369
588 Ga0316584_0005323
589 Ga0316584_0028105
590 Ga0316584_0062595
591 Ga0316584_0284224
592 Ga0395898_0056829
593 Ga0400484_00507
594 Ga0400490_07100
595 Ga0451793_0721146
596 Ga0451804_0028138
597 Ga0451837_0736930
598 Ga0451577_0000770
599 Ga0451577_0018252
600 Ga0451577_0020435
601 Ga0451577_0021002
602 Ga0451577_0027328
603 Ga0451577_0041448
604 Ga0451577_0101674
605 Ga0451577_0540082
606 Ga0451577_0626100
607 Ga0466972_0000812
608 Ga0453683_0000448
609 Ga0453683_0002533
610 Ga0453683_0092331
611 Ga0453683_0098373
612 Ga0453683_0132845
613 Ga0453683_0243872
614 Ga0453683_0425230
615 Ga0466965_0005816
616 Ga0453684_0000007
617 Ga0453684_0000895
618 Ga0453684_0001770
619 Ga0453684_0004543
620 Ga0453684_0006688
621 Ga0453684_0009911
622 Ga0453684_0010208
623 Ga0453684_0012218
624 Ga0453684_0013328
625 Ga0453684_0024183
626 Ga0453684_0030495
627 Ga0453684_0034663
628 Ga0453684_0053665
629 Ga0453684_0054478
630 Ga0453684_0096711
631 Ga0453684_0102220
632 Ga0453684_0119545
633 Ga0453684_0160499
634 Ga0453684_0205766
635 Ga0453684_0213185
636 Ga0453684_0238251
637 Ga0453684_0304340
638 Ga0453684_0338593
639 Ga0453684_0417007
640 Ga0453684_0575438
641 Ga0453684_0579160
642 Ga0453684_0594071
643 Ga0453684_0679481
644 Ga0453684_0731815
645 Ga0453684_1001585
646 Ga0453684_1160668
647 Ga0453684_1180036
648 Ga0466968_0004707
649 Ga0466960_0001841
650 Ga0451576_0000218
651 Ga0451576_0002465
652 Ga0451576_0003866
653 Ga0451576_0012251
654 Ga0451576_0149770
655 Ga0451576_0232658
656 Ga0451576_0388376
657 Ga0451576_0482031
658 Ga0451576_0560274
659 Ga0451576_0909163
660 Ga0451576_1187850
661 Ga0451576_1202252
662 Ga0495580_0120378
663 Ga0495606_0001665
664 Ga0495630_0574251
665 Ga0495652_0160541
666 Ga0495634_0336049
667 Ga0495684_0058980
668 Ga0496100_0099582
669 Ga0496101_0015706
670 Ga0496104_0229841
671 Ga0496106_0234004
672 Ga0496106_0892486
673 Ga0496109_0542348
674 Ga0496114_0000141
675 Ga0496114_0008294
676 Ga0496115_0000117
677 Ga0496115_0091170
678 Ga0496125_0096012
679 Ga0501032_0188780
680 Ga0501032_0858331
681 Ga0501034_0000081
682 Ga0501036_0042977
683 Ga0501036_0053612
684 Ga0501038_0066669
685 Ga0501038_0546136
686 Ga0501042_0111304
687 Ga0501043_0057173
688 Ga0501046_0003780
689 Ga0501047_0000001
690 Ga0501048_0000510
691 Ga0501048_0050945
692 Ga0501067_0000632
693 Ga0501067_0016141
694 Ga0501069_0016291
695 Ga0501070_0000004
696 Ga0501070_0079929
697 Ga0501072_0000020
698 Ga0501073_0000265
699 Ga0501073_0000722
700 Ga0501073_0004699
701 Ga0501073_0006600
702 Ga0501073_0033769
703 Ga0501073_0179427
704 Ga0501074_0064965
705 Ga0501074_0389675
706 Ga0501076_0212267
707 Ga0501199_011029
708 Ga0501257_014769
709 Ga0501079_0000389
710 Ga0501080_0007910
711 Ga0501080_0177139
712 Ga0501083_0000340
713 Ga0501083_0182896
714 Ga0501280_010542
715 Ga0501045_0043219
716 Ga0501045_0070978
717 nmdc:mga05p37_28338_c1
718 nmdc:mga05p37_327612_c1
719 nmdc:mga05p37_37084_c1
720 nmdc:mga05p37_44710_c1
721 nmdc:mga09592_143023_c2
722 nmdc:mga09592_183590_c1
723 nmdc:mga09592_585131_c1
724 nmdc:mga0qj67_102012_c1
725 nmdc:mga0qj67_435751_c1
726 nmdc:mga0qj67_84458_c1
727 nmdc:mga08y16_1413175_c1
728 nmdc:mga0n895_121134_c1
729 nmdc:mga0a205_2609_c1
730 nmdc:mga0a205_359810_c1
731 nmdc:mga0a205_370826_c1
732 nmdc:mga0a205_596596_c1
733 Ga0495601_0102860
734 Ga0501084_0000014
735 Ga0501082_0000832
736 Ga0501082_0031992
737 Ga0530510_0036404
738 Ga0530510_0461225

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00694

Aconitase_C

Aconitase C-terminal domain

44

167

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
3q3w-assembly1.cif.gz_A isopropylmalate isomerase small subunit from campylobacter jejuni. 0.9556 1 175
2hcu-assembly1.cif.gz_A crystal structure of smu.1381 (or leud) from streptococcus mutans 0.9493 1 174
3h5j-assembly1.cif.gz_A leud_1-168 small subunit of isopropylmalate isomerase (rv2987c) from mycobacterium tuberculosis 0.9417 1 174
3h5j-assembly1.cif.gz_A leud_1-168 small subunit of isopropylmalate isomerase (rv2987c) from mycobacterium tuberculosis 0.9363 1 174
3q3w-assembly1.cif.gz_A isopropylmalate isomerase small subunit from campylobacter jejuni. 0.9298 1 175
ID Description Score Start End Superfamily
af_O14289_535_712_3.20.19.10 Alpha Beta;Alpha-Beta Barrel;Aconitase; domain 4;Aconitase, domain 4 0.9679 1 177 3.20.19.10
af_Q2FWK0_1_171_3.20.19.10 Alpha Beta;Alpha-Beta Barrel;Aconitase; domain 4;Aconitase, domain 4 0.9551 3 174 3.20.19.10
3q3wA00 Alpha Beta;Alpha-Beta Barrel;Aconitase; domain 4;Aconitase, domain 4 0.949 1 175 3.20.19.10
af_O14289_535_712_3.20.19.10 Alpha Beta;Alpha-Beta Barrel;Aconitase; domain 4;Aconitase, domain 4 0.9468 1 177 3.20.19.10
3h5jA00 Alpha Beta;Alpha-Beta Barrel;Aconitase; domain 4;Aconitase, domain 4 0.9417 1 174 3.20.19.10
ID Description Score Start End GO Terms
AF-A0A2V7V6T4-F1-model_v4 3-isopropylmalate dehydratase (EC 4.2.1.33) 0.9972 9 95 GO:0009098
GO:0016829
AF-A0A2V9KI05-F1-model_v4 3-isopropylmalate dehydratase (EC 4.2.1.33) 0.9967 1 130 GO:0003861
GO:0009098
GO:0009316
AF-A0A3N5IRI4-F1-model_v4 3-isopropylmalate dehydratase (EC 4.2.1.33) 0.9924 1 107 GO:0003861
GO:0009098
GO:0009316
AF-A0A537P489-F1-model_v4 3-isopropylmalate dehydratase (EC 4.2.1.33) 0.9914 1 119 GO:0003861
GO:0009098
GO:0009316
AF-A0A2V7JGP4-F1-model_v4 Multifunctional fusion protein [Includes: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (Isopropylmalate isomerase) (IPMI); 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (3-IPM-DH) (Beta-IPM dehydrogenase) (IMDH)] 0.9905 1 170 GO:0000287
GO:0003861
GO:0003862
GO:0009098
GO:0009316
GO:0051287

Map