F424607

General Info

Members Datasets Scaffolds Average Seq Length
368 187 736 210

Family's Representative Sequence

Representative Sequence 3300005440|Ga0070705_100073429|Ga0070705_1000734292
Length 238
Sequence MSLRILLADDHQIVRQGVRALLEKHGMQIVAECCDGREAVQLAVKHNPDVAVLDMTMPGLNGVDAARQILEQRPSTGVVLLTFQTGESQVVSALRVGIRGYVLKTQTSDDLVRALREVAARGTYLSPGISQIVVTAYLNGGEPGQDPLTSREREVLQLVAEGKTTKEVAGVLGLSAKTAESYRGRLMQKLEIHETAGLVRYAIRQGLIQAVLLLFCVGDLVFDPAFADLVGDAVDLIM

Samples

Sample ID Description Type Environment
1 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300004798 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
4 3300004801 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
5 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
8 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
9 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
10 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
11 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
12 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
13 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
14 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
15 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
16 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
17 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
18 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
19 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
20 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
21 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
22 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
23 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
24 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
25 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
26 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
27 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
28 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
29 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
30 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
31 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
32 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
33 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
34 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
35 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
36 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
37 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
38 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
39 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
40 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
41 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
42 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
43 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
44 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
45 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
46 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
47 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
48 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
49 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
50 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
51 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
52 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
53 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
54 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
55 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
56 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
57 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
58 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
59 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
60 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
61 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
62 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
63 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
64 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
65 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
66 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
67 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
68 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
69 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
70 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
71 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
72 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
73 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
74 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
75 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
76 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
77 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
78 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
79 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
80 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
81 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
82 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
83 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
116 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
119 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
120 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
121 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
122 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
123 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
124 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
125 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
126 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
127 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
128 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
129 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
130 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
131 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
132 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
133 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
134 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
135 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
136 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
137 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
138 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
139 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
140 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
141 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
142 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
143 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
144 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
145 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
146 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
147 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
148 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
149 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
150 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
151 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
152 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
153 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
154 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
155 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
156 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
157 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
158 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
159 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
160 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
161 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
162 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
163 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
164 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
165 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
166 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
167 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
168 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
169 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
170 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
171 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
172 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
173 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
174 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
175 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
176 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
177 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
178 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
179 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
180 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
181 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
182 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
183 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
184 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
185 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
186 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
187 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.46
Metatranscriptomes 0.54
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.27
Rhizosphere 98.91
Stem 0
Stem Tuber 0
Unclassified 16.85

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070705_100073429 3300005440 Bacteria 2076
2 rootH1_10163320 3300003316 Bacteria 2681
3 Ga0058859_11830695 3300004798 Unclassified 1254
4 Ga0058860_10042123 3300004801 Unclassified 1807
5 Ga0065714_10106616 3300005288 Unclassified 1545
6 Ga0065715_10255343 3300005293 Unclassified 1154
7 Ga0065707_10401425 3300005295 Bacteria 852
8 Ga0070676_10082749 3300005328 Bacteria 1951
9 Ga0070676_10124087 3300005328 Unclassified 1625
10 Ga0070690_100347801 3300005330 Archaea 1075
11 Ga0070690_100581592 3300005330 Unclassified 848
12 Ga0070670_100024667 3300005331 Bacteria 5171
13 Ga0070677_10321246 3300005333 Unclassified 793
14 Ga0068869_100047048 3300005334 Bacteria 3113
15 Ga0068869_100049680 3300005334 Bacteria 3037
16 Ga0070680_100240840 3300005336 Unclassified 1529
17 Ga0070689_100007900 3300005340 Bacteria 7463
18 Ga0070689_100065279 3300005340 Unclassified 2834
19 Ga0070689_100280825 3300005340 Bacteria 1381
20 Ga0070691_10031781 3300005341 Bacteria 2477
21 Ga0070691_10143605 3300005341 Unclassified 1218
22 Ga0070687_100383820 3300005343 Unclassified 916
23 Ga0070692_10039625 3300005345 Bacteria 2406
24 Ga0070692_10049875 3300005345 Bacteria 2172
25 Ga0070668_100025316 3300005347 Bacteria 4498
26 Ga0070669_100021461 3300005353 Bacteria 4614
27 Ga0070669_100118942 3300005353 Bacteria 2013
28 Ga0070669_100167902 3300005353 Bacteria 1709
29 Ga0070675_100043849 3300005354 Bacteria 3658
30 Ga0070675_100486757 3300005354 Unclassified 1110
31 Ga0070674_100204696 3300005356 Bacteria 1526
32 Ga0070673_100360531 3300005364 Bacteria 1292
33 Ga0070673_100561121 3300005364 Bacteria 1038
34 Ga0070673_100564061 3300005364 Archaea 1035
35 Ga0070688_100091656 3300005365 Unclassified 1987
36 Ga0070688_100141725 3300005365 Bacteria 1634
37 Ga0070659_100467950 3300005366 Bacteria 1071
38 Ga0070703_10035679 3300005406 Bacteria 1524
39 Ga0070714_100789274 3300005435 Bacteria 919
40 Ga0070701_10032856 3300005438 Bacteria 2587
41 Ga0070701_10080186 3300005438 Unclassified 1765
42 Ga0070701_10440875 3300005438 Bacteria 834
43 Ga0070711_100263890 3300005439 Bacteria 1356
44 Ga0070705_100000380 3300005440 Bacteria 25908
45 Ga0070705_100063109 3300005440 Bacteria 2209
46 Ga0070705_100156416 3300005440 Bacteria 1518
47 Ga0070700_100069988 3300005441 Bacteria 2236
48 Ga0070700_100138322 3300005441 Unclassified 1652
49 Ga0070700_100268140 3300005441 Unclassified 1232
50 Ga0070694_100000208 3300005444 Bacteria 30971
51 Ga0070694_100090498 3300005444 Bacteria 2146
52 Ga0070694_100094915 3300005444 Bacteria 2099
53 Ga0070694_100296565 3300005444 Bacteria 1237
54 Ga0070708_100034627 3300005445 Bacteria 4395
55 Ga0070708_100384603 3300005445 Bacteria 1323
56 Ga0070708_100525652 3300005445 Unclassified 1116
57 Ga0070708_100611220 3300005445 Bacteria 1028
58 Ga0070662_100624214 3300005457 Bacteria 908
59 Ga0068867_100029212 3300005459 Bacteria 3971
60 Ga0068867_100102771 3300005459 Bacteria 2185
61 Ga0068867_100124522 3300005459 Bacteria 1996
62 Ga0070685_10010661 3300005466 Bacteria 4783
63 Ga0070706_100132685 3300005467 Bacteria 2324
64 Ga0070706_100137972 3300005467 Bacteria 2276
65 Ga0070707_100176646 3300005468 Bacteria 2081
66 Ga0070707_100329472 3300005468 Bacteria 1483
67 Ga0070707_100486817 3300005468 Bacteria 1195
68 Ga0070698_100006383 3300005471 Bacteria 12804
69 Ga0070698_100107172 3300005471 Bacteria 2762
70 Ga0070698_100142017 3300005471 Bacteria 2352
71 Ga0070698_100211102 3300005471 Bacteria 1876
72 Ga0070698_100266596 3300005471 Bacteria 1645
73 Ga0070699_100000025 3300005518 Bacteria 158245
74 Ga0070699_100025908 3300005518 Bacteria 5056
75 Ga0070699_100029300 3300005518 Bacteria 4746
76 Ga0070699_100155219 3300005518 Bacteria 2025
77 Ga0070699_100386594 3300005518 Unclassified 1264
78 Ga0070697_100021674 3300005536 Bacteria 5093
79 Ga0070697_100026832 3300005536 Bacteria 4605
80 Ga0070697_100056762 3300005536 Bacteria 3185
81 Ga0070697_100328358 3300005536 Bacteria 1318
82 Ga0070686_100254787 3300005544 Bacteria 1283
83 Ga0070686_100256077 3300005544 Bacteria 1281
84 Ga0070686_100531181 3300005544 Bacteria 917
85 Ga0070686_100556441 3300005544 Bacteria 898
86 Ga0070695_100000037 3300005545 Bacteria 50884
87 Ga0070695_100002562 3300005545 Bacteria 10491
88 Ga0070695_100103623 3300005545 Unclassified 1920
89 Ga0070695_100163748 3300005545 Bacteria 1563
90 Ga0070695_100442370 3300005545 Bacteria 994
91 Ga0070696_100000444 3300005546 Bacteria 25904
92 Ga0070696_100066882 3300005546 Bacteria 2521
93 Ga0070696_100067348 3300005546 Bacteria 2512
94 Ga0070696_100113958 3300005546 Bacteria 1950
95 Ga0070696_100138649 3300005546 Unclassified 1775
96 Ga0070704_100003260 3300005549 Bacteria 9272
97 Ga0070704_100033429 3300005549 Bacteria 3477
98 Ga0070704_100073270 3300005549 Bacteria 2494
99 Ga0070704_100181733 3300005549 Bacteria 1683
100 Ga0070704_100223228 3300005549 Bacteria 1533
101 Ga0070704_100278039 3300005549 Bacteria 1386
102 Ga0070704_100532269 3300005549 Bacteria 1024
103 Ga0070704_100619409 3300005549 Bacteria 953
104 Ga0068855_100595191 3300005563 Bacteria 1193
105 Ga0068857_100030147 3300005577 Bacteria 4787
106 Ga0068854_100268514 3300005578 Bacteria 1369
107 Ga0070702_100034143 3300005615 Bacteria 2802
108 Ga0068859_100006421 3300005617 Bacteria 11930
109 Ga0068859_100020775 3300005617 Bacteria 6590
110 Ga0068859_100113510 3300005617 Bacteria 2773
111 Ga0068859_100434154 3300005617 Bacteria 1410
112 Ga0068864_100711335 3300005618 Bacteria 982
113 Ga0068861_100017926 3300005719 Bacteria 5034
114 Ga0068861_100018040 3300005719 Bacteria 5019
115 Ga0068861_100070651 3300005719 Unclassified 2704
116 Ga0068861_100659321 3300005719 Bacteria 968
117 Ga0068858_100235101 3300005842 Bacteria 1738
118 Ga0068860_100708770 3300005843 Bacteria 1016
119 Ga0068862_100056191 3300005844 Bacteria 3372
120 Ga0068862_100244057 3300005844 Unclassified 1634
121 Ga0075432_10069910 3300006058 Bacteria 1260
122 Ga0070715_10140916 3300006163 Bacteria 1171
123 Ga0070716_100032060 3300006173 Bacteria 2863
124 Ga0070716_100421152 3300006173 Unclassified 966
125 Ga0070712_100027557 3300006175 Unclassified 3794
126 Ga0068871_100102226 3300006358 Bacteria 2402
127 Ga0068871_100538610 3300006358 Bacteria 1056
128 Ga0075428_100051016 3300006844 Bacteria 4536
129 Ga0075428_100085580 3300006844 Bacteria 3438
130 Ga0075430_100001355 3300006846 Bacteria 19829
131 Ga0075431_100621395 3300006847 Bacteria 1063
132 Ga0075433_10000065 3300006852 Bacteria 46718
133 Ga0075433_10055771 3300006852 Bacteria 3450
134 Ga0075433_10117475 3300006852 Bacteria 2360
135 Ga0075433_10120451 3300006852 Bacteria 2330
136 Ga0075433_10136361 3300006852 Bacteria 2182
137 Ga0075434_100000450 3300006871 Bacteria 30652
138 Ga0075434_100033561 3300006871 Bacteria 5066
139 Ga0075434_100079568 3300006871 Bacteria 3274
140 Ga0075434_100337266 3300006871 Bacteria 1528
141 Ga0075434_100715609 3300006871 Bacteria 1018
142 Ga0075434_101287366 3300006871 Bacteria 742
143 Ga0075429_100000953 3300006880 Bacteria 22926
144 Ga0075429_100581525 3300006880 Bacteria 981
145 Ga0075436_100046218 3300006914 Bacteria 3003
146 Ga0097620_100006421 3300006931 Bacteria 11930
147 Ga0097620_100020775 3300006931 Bacteria 6590
148 Ga0097620_100113512 3300006931 Bacteria 2773
149 Ga0097620_100434159 3300006931 Bacteria 1410
150 Ga0075435_100118562 3300007076 Bacteria 2206
151 Ga0075435_100141796 3300007076 Unclassified 2016
152 Ga0075435_100357410 3300007076 Bacteria 1252
153 Ga0075435_100412629 3300007076 Bacteria 1162
154 Ga0075435_100533769 3300007076 Unclassified 1015
155 Ga0099794_10024598 3300007265 Bacteria 2766
156 Ga0099794_10052669 3300007265 Bacteria 1962
157 Ga0099795_10012539 3300007788 Bacteria 2574
158 Ga0105240_10063089 3300009093 Bacteria 4611
159 Ga0111539_10006544 3300009094 Bacteria 15014
160 Ga0111539_10019361 3300009094 Bacteria 8402
161 Ga0111539_10031218 3300009094 Bacteria 6474
162 Ga0111539_10258573 3300009094 Bacteria 2027
163 Ga0114129_10004649 3300009147 Bacteria 19378
164 Ga0114129_10028318 3300009147 Bacteria 7938
165 Ga0114129_10043731 3300009147 Bacteria 6302
166 Ga0114129_10053513 3300009147 Bacteria 5661
167 Ga0114129_10189847 3300009147 Bacteria 2791
168 Ga0114129_12007149 3300009147 Bacteria 699
169 Ga0105243_10012081 3300009148 Bacteria 6528
170 Ga0105243_10779629 3300009148 Bacteria 940
171 Ga0105241_10108410 3300009174 Bacteria 2220
172 Ga0105242_10308439 3300009176 Bacteria 1447
173 Ga0105242_10696362 3300009176 Unclassified 993
174 Ga0105248_10350903 3300009177 Bacteria 1661
175 Ga0105249_10144404 3300009553 Unclassified 2285
176 Ga0105249_10283553 3300009553 Unclassified 1655
177 Ga0105249_10503139 3300009553 Unclassified 1257
178 Ga0099796_10004811 3300010159 Bacteria 3307
179 Ga0157378_11233452 3300013297 Bacteria 788
180 Ga0157375_10426849 3300013308 Unclassified 1491
181 Ga0157375_10889405 3300013308 Bacteria 1035
182 Ga0157380_10026540 3300014326 Unclassified 4398
183 Ga0157380_10224262 3300014326 Unclassified 1683
184 Ga0157379_10745100 3300014968 Bacteria 922
185 Ga0207653_10001783 3300025885 Bacteria 6883
186 Ga0207642_10088408 3300025899 Unclassified 1524
187 Ga0207685_10026529 3300025905 Bacteria 2016
188 Ga0207645_10128493 3300025907 Bacteria 1648
189 Ga0207684_10044435 3300025910 Bacteria 3767
190 Ga0207684_10100081 3300025910 Bacteria 2477
191 Ga0207684_10143905 3300025910 Bacteria 2051
192 Ga0207660_10094348 3300025917 Bacteria 2224
193 Ga0207662_10163018 3300025918 Unclassified 1425
194 Ga0207662_10414277 3300025918 Bacteria 916
195 Ga0207646_10110962 3300025922 Bacteria 2461
196 Ga0207646_10684295 3300025922 Bacteria 918
197 Ga0207681_10190621 3300025923 Bacteria 1568
198 Ga0207681_10402063 3300025923 Archaea 1106
199 Ga0207681_10591154 3300025923 Unclassified 916
200 Ga0207650_10012216 3300025925 Bacteria 5925
201 Ga0207659_10163379 3300025926 Bacteria 1750
202 Ga0207659_10550120 3300025926 Bacteria 981
203 Ga0207706_10264640 3300025933 Bacteria 1501
204 Ga0207686_10147938 3300025934 Bacteria 1632
205 Ga0207686_10178326 3300025934 Unclassified 1505
206 Ga0207686_10236997 3300025934 Unclassified 1326
207 Ga0207709_10079358 3300025935 Bacteria 2110
208 Ga0207670_10099381 3300025936 Bacteria 2076
209 Ga0207670_10184433 3300025936 Unclassified 1574
210 Ga0207665_10019885 3300025939 Bacteria 4412
211 Ga0207665_10119391 3300025939 Bacteria 1861
212 Ga0207711_10357484 3300025941 Bacteria 1353
213 Ga0207689_10029204 3300025942 Unclassified 4607
214 Ga0207689_10391657 3300025942 Bacteria 1158
215 Ga0207667_10444479 3300025949 Bacteria 1318
216 Ga0207651_10192796 3300025960 Bacteria 1627
217 Ga0207651_10225883 3300025960 Bacteria 1517
218 Ga0207651_10304252 3300025960 Bacteria 1327
219 Ga0207712_10087466 3300025961 Bacteria 2285
220 Ga0207668_10611179 3300025972 Bacteria 950
221 Ga0207640_10139160 3300025981 Bacteria 1767
222 Ga0207703_10227850 3300026035 Bacteria 1669
223 Ga0207708_10112611 3300026075 Bacteria 2113
224 Ga0207708_10154713 3300026075 Bacteria 1808
225 Ga0207708_10364251 3300026075 Bacteria 1189
226 Ga0207708_10654654 3300026075 Bacteria 894
227 Ga0207641_10668494 3300026088 Archaea 1021
228 Ga0207648_10018201 3300026089 Bacteria 6363
229 Ga0207648_10134516 3300026089 Bacteria 2177
230 Ga0207676_10933962 3300026095 Bacteria 852
231 Ga0207674_10100590 3300026116 Unclassified 2872
232 Ga0207674_10388734 3300026116 Archaea 1349
233 Ga0207675_100008067 3300026118 Bacteria 9919
234 Ga0207675_100083697 3300026118 Unclassified 2993
235 Ga0207675_100548760 3300026118 Bacteria 1155
236 Ga0209179_1005528 3300027512 Bacteria 1984
237 Ga0209588_1139823 3300027671 Unclassified 770
238 Ga0207428_10002626 3300027907 Bacteria 17919
239 Ga0207428_10141473 3300027907 Unclassified 1836
240 Ga0207428_10164488 3300027907 Bacteria 1683
241 Ga0268265_10739425 3300028380 Bacteria 954
242 Ga0268264_10877124 3300028381 Bacteria 900
243 Ga0307408_100224097 3300031548 Bacteria 1536
244 Ga0307405_10201630 3300031731 Bacteria 1445
245 Ga0307410_10002219 3300031852 Bacteria 9264
246 Ga0307410_10003611 3300031852 Bacteria 7797
247 Ga0307407_10016650 3300031903 Bacteria 3665
248 Ga0307407_10051117 3300031903 Bacteria 2368
249 Ga0307409_100070583 3300031995 Bacteria 2773
250 Ga0307409_100987366 3300031995 Bacteria 859
251 Ga0307416_100104958 3300032002 Unclassified 2472
252 Ga0307416_100126743 3300032002 Bacteria 2288
253 Ga0307414_10108925 3300032004 Bacteria 2103
254 Ga0307414_10215398 3300032004 Bacteria 1573
255 Ga0307411_10096715 3300032005 Bacteria 2076
256 Ga0307411_10190076 3300032005 Bacteria 1567
257 Ga0307415_100054513 3300032126 Bacteria 2730
258 Ga0373950_0058844 3300034818 Unclassified 768
259 Ga0373940_0004443 3300035088 Bacteria 2964
260 Ga0373951_0032361 3300035091 Bacteria 1237
261 Ga0373932_0012646 3300035112 Bacteria 2082
262 Ga0373932_0063837 3300035112 Bacteria 1126
263 Ga0373939_0017416 3300035114 Bacteria 1908
264 Ga0373939_0040309 3300035114 Unclassified 1402
265 Ga0373961_0018849 3300035241 Bacteria 1807
266 Ga0373962_0017377 3300035242 Bacteria 1864
267 Ga0373931_0003345 3300035691 Bacteria 7182
268 Ga0373931_0019906 3300035691 Bacteria 3354
269 Ga0373931_0049445 3300035691 Bacteria 2233
270 Ga0373937_0077520 3300036401 Bacteria 3071
271 Ga0373937_0522258 3300036401 Bacteria 1128
272 Ga0373925_0013457 3300037068 Bacteria 5921
273 Ga0373925_0067858 3300037068 Unclassified 2691
274 Ga0373925_0541651 3300037068 Bacteria 957
275 Ga0439435_0113978 3300042436 Bacteria 841
276 Ga0453683_0015752 3300044673 Bacteria 4890
277 Ga0453683_0089147 3300044673 Bacteria 1933
278 Ga0453683_0206438 3300044673 Bacteria 1248
279 Ga0453683_0244061 3300044673 Bacteria 1144
280 Ga0453684_0325276 3300044712 Unclassified 1740
281 Ga0453684_1070453 3300044712 Bacteria 854
282 Ga0451576_0009534 3300045051 Bacteria 11247
283 Ga0451576_0250206 3300045051 Unclassified 1852
284 Ga0495629_0000018 3300046459 Bacteria 169239
285 Ga0495629_0056080 3300046459 Bacteria 2755
286 Ga0495580_0000898 3300046472 Bacteria 25906
287 Ga0495580_0003454 3300046472 Bacteria 13453
288 Ga0495580_0679793 3300046472 Unclassified 675
289 Ga0495582_0015633 3300046473 Bacteria 4167
290 Ga0495582_0036937 3300046473 Unclassified 2687
291 Ga0495639_0030409 3300046475 Bacteria 2400
292 Ga0495639_0049437 3300046475 Bacteria 1908
293 Ga0495662_0125773 3300046476 Bacteria 1259
294 Ga0495584_0178676 3300046491 Bacteria 1079
295 Ga0495594_0010459 3300046499 Bacteria 4814
296 Ga0495594_0044831 3300046499 Unclassified 2427
297 Ga0495642_0053180 3300046528 Bacteria 1668
298 Ga0495586_0019207 3300046535 Bacteria 3635
299 Ga0495622_0228243 3300046557 Bacteria 823
300 Ga0495635_0001896 3300046663 Bacteria 14205
301 Ga0495659_0008222 3300046664 Bacteria 3317
302 Ga0495659_0025945 3300046664 Bacteria 2009
303 Ga0495647_0001181 3300046681 Bacteria 8026
304 Ga0495647_0067841 3300046681 Unclassified 1422
305 Ga0495658_0000126 3300046683 Bacteria 41756
306 Ga0495669_0156913 3300046684 Bacteria 1079
307 Ga0495613_0012135 3300046689 Bacteria 6403
308 Ga0495613_0136934 3300046689 Unclassified 1751
309 Ga0495581_0000742 3300047315 Bacteria 17314
310 Ga0495604_0075829 3300047317 Unclassified 2531
311 Ga0495674_0089638 3300047319 Unclassified 2629
312 Ga0495676_0139731 3300047321 Bacteria 1737
313 Ga0495680_0000044 3300047322 Bacteria 97068
314 Ga0495677_0135146 3300047445 Bacteria 945
315 Ga0495685_107070 3300047447 Bacteria 921
316 Ga0495614_0004129 3300048089 Bacteria 6539
317 Ga0496106_0105041 3300048909 Bacteria 2194
318 Ga0501042_0612616 3300049578 Unclassified 792
319 Ga0501067_0234711 3300049583 Bacteria 1021
320 Ga0501076_0477964 3300049592 Bacteria 1027
321 Ga0501079_0242200 3300049741 Bacteria 1409
322 Ga0501045_0137055 3300049824 Bacteria 1820
323 nmdc:mga05p37_132809_c1 3300050507 Bacteria 3054
324 nmdc:mga05p37_222848_c1 3300050507 Bacteria 2275
325 nmdc:mga05p37_24843_c1 3300050507 Bacteria 7285
326 nmdc:mga05p37_26441_c1 3300050507 Bacteria 7060
327 nmdc:mga05p37_29344_c1 3300050507 Bacteria 6713
328 nmdc:mga09592_34280_c1 3300050508 Bacteria 4244
329 nmdc:mga09592_7729_c1 3300050508 Bacteria 8741
330 nmdc:mga0qj67_4924_c1 3300050509 Bacteria 9714
331 nmdc:mga06r32_37817_c1 3300050510 Bacteria 4567
332 nmdc:mga06r32_608473_c1 3300050510 Bacteria 1063
333 nmdc:mga08y16_27027_c1 3300050511 Bacteria 6048
334 nmdc:mga08y16_273527_c1 3300050511 Bacteria 1743
335 nmdc:mga08y16_32754_c1 3300050511 Bacteria 5464
336 nmdc:mga08y16_50264_c1 3300050511 Bacteria 4363
337 nmdc:mga0n895_365358_c1 3300050512 Bacteria 1461
338 nmdc:mga0n895_711648_c1 3300050512 Bacteria 1000
339 nmdc:mga0n895_87651_c1 3300050512 Bacteria 3111
340 nmdc:mga0n895_9143_c1 3300050512 Bacteria 8652
341 nmdc:mga0n895_99376_c1 3300050512 Unclassified 2918
342 nmdc:mga0rr50_114695_c1 3300050513 Bacteria 2137
343 nmdc:mga0rr50_115191_c1 3300050513 Bacteria 2133
344 nmdc:mga0rr50_119554_c1 3300050513 Bacteria 2095
345 nmdc:mga0rr50_123787_c1 3300050513 Unclassified 2062
346 nmdc:mga0rr50_166232_c1 3300050513 Bacteria 1794
347 nmdc:mga0rr50_194223_c1 3300050513 Bacteria 1665
348 nmdc:mga0rr50_467815_c1 3300050513 Bacteria 1070
349 nmdc:mga0rr50_506942_c1 3300050513 Unclassified 1026
350 nmdc:mga0rr50_63142_c1 3300050513 Bacteria 2796
351 nmdc:mga08x19_49419_c1 3300050514 Bacteria 2697
352 nmdc:mga0a205_207710_c1 3300050515 Bacteria 1847
353 nmdc:mga0a205_269_c1 3300050515 Bacteria 37657
354 nmdc:mga0a205_294410_c1 3300050515 Bacteria 1497
355 nmdc:mga0a205_35572_c1 3300050515 Bacteria 4782
356 nmdc:mga0a205_41785_c1 3300050515 Bacteria 4417
357 nmdc:mga0a205_5295_c1 3300050515 Bacteria 11612
358 nmdc:mga0a205_675502_c1 3300050515 Bacteria 883
359 Ga0495619_0003476 3300053085 Bacteria 10169
360 Ga0501084_0545281 3300054114 Bacteria 980
361 Ga0590071_000431 3300059421 Bacteria 12248
362 Ga0590074_002411 3300059423 Bacteria 3067
363 Ga0590075_000605 3300059424 Bacteria 9647
364 Ga0590075_006926 3300059424 Unclassified 2686
365 Ga0590077_000054 3300059426 Bacteria 27477
366 Ga0590077_010241 3300059426 Bacteria 1929
367 Ga0501082_0120553 3300060353 Bacteria 2274
368 Ga0530510_0311784 3300061734 Bacteria 1178
369 Ga0070705_100073429
370 rootH1_10163320
371 Ga0058859_11830695
372 Ga0058860_10042123
373 Ga0065714_10106616
374 Ga0065715_10255343
375 Ga0065707_10401425
376 Ga0070676_10082749
377 Ga0070676_10124087
378 Ga0070690_100347801
379 Ga0070690_100581592
380 Ga0070670_100024667
381 Ga0070677_10321246
382 Ga0068869_100047048
383 Ga0068869_100049680
384 Ga0070680_100240840
385 Ga0070689_100007900
386 Ga0070689_100065279
387 Ga0070689_100280825
388 Ga0070691_10031781
389 Ga0070691_10143605
390 Ga0070687_100383820
391 Ga0070692_10039625
392 Ga0070692_10049875
393 Ga0070668_100025316
394 Ga0070669_100021461
395 Ga0070669_100118942
396 Ga0070669_100167902
397 Ga0070675_100043849
398 Ga0070675_100486757
399 Ga0070674_100204696
400 Ga0070673_100360531
401 Ga0070673_100561121
402 Ga0070673_100564061
403 Ga0070688_100091656
404 Ga0070688_100141725
405 Ga0070659_100467950
406 Ga0070703_10035679
407 Ga0070714_100789274
408 Ga0070701_10032856
409 Ga0070701_10080186
410 Ga0070701_10440875
411 Ga0070711_100263890
412 Ga0070705_100000380
413 Ga0070705_100063109
414 Ga0070705_100156416
415 Ga0070700_100069988
416 Ga0070700_100138322
417 Ga0070700_100268140
418 Ga0070694_100000208
419 Ga0070694_100090498
420 Ga0070694_100094915
421 Ga0070694_100296565
422 Ga0070708_100034627
423 Ga0070708_100384603
424 Ga0070708_100525652
425 Ga0070708_100611220
426 Ga0070662_100624214
427 Ga0068867_100029212
428 Ga0068867_100102771
429 Ga0068867_100124522
430 Ga0070685_10010661
431 Ga0070706_100132685
432 Ga0070706_100137972
433 Ga0070707_100176646
434 Ga0070707_100329472
435 Ga0070707_100486817
436 Ga0070698_100006383
437 Ga0070698_100107172
438 Ga0070698_100142017
439 Ga0070698_100211102
440 Ga0070698_100266596
441 Ga0070699_100000025
442 Ga0070699_100025908
443 Ga0070699_100029300
444 Ga0070699_100155219
445 Ga0070699_100386594
446 Ga0070697_100021674
447 Ga0070697_100026832
448 Ga0070697_100056762
449 Ga0070697_100328358
450 Ga0070686_100254787
451 Ga0070686_100256077
452 Ga0070686_100531181
453 Ga0070686_100556441
454 Ga0070695_100000037
455 Ga0070695_100002562
456 Ga0070695_100103623
457 Ga0070695_100163748
458 Ga0070695_100442370
459 Ga0070696_100000444
460 Ga0070696_100066882
461 Ga0070696_100067348
462 Ga0070696_100113958
463 Ga0070696_100138649
464 Ga0070704_100003260
465 Ga0070704_100033429
466 Ga0070704_100073270
467 Ga0070704_100181733
468 Ga0070704_100223228
469 Ga0070704_100278039
470 Ga0070704_100532269
471 Ga0070704_100619409
472 Ga0068855_100595191
473 Ga0068857_100030147
474 Ga0068854_100268514
475 Ga0070702_100034143
476 Ga0068859_100006421
477 Ga0068859_100020775
478 Ga0068859_100113510
479 Ga0068859_100434154
480 Ga0068864_100711335
481 Ga0068861_100017926
482 Ga0068861_100018040
483 Ga0068861_100070651
484 Ga0068861_100659321
485 Ga0068858_100235101
486 Ga0068860_100708770
487 Ga0068862_100056191
488 Ga0068862_100244057
489 Ga0075432_10069910
490 Ga0070715_10140916
491 Ga0070716_100032060
492 Ga0070716_100421152
493 Ga0070712_100027557
494 Ga0068871_100102226
495 Ga0068871_100538610
496 Ga0075428_100051016
497 Ga0075428_100085580
498 Ga0075430_100001355
499 Ga0075431_100621395
500 Ga0075433_10000065
501 Ga0075433_10055771
502 Ga0075433_10117475
503 Ga0075433_10120451
504 Ga0075433_10136361
505 Ga0075434_100000450
506 Ga0075434_100033561
507 Ga0075434_100079568
508 Ga0075434_100337266
509 Ga0075434_100715609
510 Ga0075434_101287366
511 Ga0075429_100000953
512 Ga0075429_100581525
513 Ga0075436_100046218
514 Ga0097620_100006421
515 Ga0097620_100020775
516 Ga0097620_100113512
517 Ga0097620_100434159
518 Ga0075435_100118562
519 Ga0075435_100141796
520 Ga0075435_100357410
521 Ga0075435_100412629
522 Ga0075435_100533769
523 Ga0099794_10024598
524 Ga0099794_10052669
525 Ga0099795_10012539
526 Ga0105240_10063089
527 Ga0111539_10006544
528 Ga0111539_10019361
529 Ga0111539_10031218
530 Ga0111539_10258573
531 Ga0114129_10004649
532 Ga0114129_10028318
533 Ga0114129_10043731
534 Ga0114129_10053513
535 Ga0114129_10189847
536 Ga0114129_12007149
537 Ga0105243_10012081
538 Ga0105243_10779629
539 Ga0105241_10108410
540 Ga0105242_10308439
541 Ga0105242_10696362
542 Ga0105248_10350903
543 Ga0105249_10144404
544 Ga0105249_10283553
545 Ga0105249_10503139
546 Ga0099796_10004811
547 Ga0157378_11233452
548 Ga0157375_10426849
549 Ga0157375_10889405
550 Ga0157380_10026540
551 Ga0157380_10224262
552 Ga0157379_10745100
553 Ga0207653_10001783
554 Ga0207642_10088408
555 Ga0207685_10026529
556 Ga0207645_10128493
557 Ga0207684_10044435
558 Ga0207684_10100081
559 Ga0207684_10143905
560 Ga0207660_10094348
561 Ga0207662_10163018
562 Ga0207662_10414277
563 Ga0207646_10110962
564 Ga0207646_10684295
565 Ga0207681_10190621
566 Ga0207681_10402063
567 Ga0207681_10591154
568 Ga0207650_10012216
569 Ga0207659_10163379
570 Ga0207659_10550120
571 Ga0207706_10264640
572 Ga0207686_10147938
573 Ga0207686_10178326
574 Ga0207686_10236997
575 Ga0207709_10079358
576 Ga0207670_10099381
577 Ga0207670_10184433
578 Ga0207665_10019885
579 Ga0207665_10119391
580 Ga0207711_10357484
581 Ga0207689_10029204
582 Ga0207689_10391657
583 Ga0207667_10444479
584 Ga0207651_10192796
585 Ga0207651_10225883
586 Ga0207651_10304252
587 Ga0207712_10087466
588 Ga0207668_10611179
589 Ga0207640_10139160
590 Ga0207703_10227850
591 Ga0207708_10112611
592 Ga0207708_10154713
593 Ga0207708_10364251
594 Ga0207708_10654654
595 Ga0207641_10668494
596 Ga0207648_10018201
597 Ga0207648_10134516
598 Ga0207676_10933962
599 Ga0207674_10100590
600 Ga0207674_10388734
601 Ga0207675_100008067
602 Ga0207675_100083697
603 Ga0207675_100548760
604 Ga0209179_1005528
605 Ga0209588_1139823
606 Ga0207428_10002626
607 Ga0207428_10141473
608 Ga0207428_10164488
609 Ga0268265_10739425
610 Ga0268264_10877124
611 Ga0307408_100224097
612 Ga0307405_10201630
613 Ga0307410_10002219
614 Ga0307410_10003611
615 Ga0307407_10016650
616 Ga0307407_10051117
617 Ga0307409_100070583
618 Ga0307409_100987366
619 Ga0307416_100104958
620 Ga0307416_100126743
621 Ga0307414_10108925
622 Ga0307414_10215398
623 Ga0307411_10096715
624 Ga0307411_10190076
625 Ga0307415_100054513
626 Ga0373950_0058844
627 Ga0373940_0004443
628 Ga0373951_0032361
629 Ga0373932_0012646
630 Ga0373932_0063837
631 Ga0373939_0017416
632 Ga0373939_0040309
633 Ga0373961_0018849
634 Ga0373962_0017377
635 Ga0373931_0003345
636 Ga0373931_0019906
637 Ga0373931_0049445
638 Ga0373937_0077520
639 Ga0373937_0522258
640 Ga0373925_0013457
641 Ga0373925_0067858
642 Ga0373925_0541651
643 Ga0439435_0113978
644 Ga0453683_0015752
645 Ga0453683_0089147
646 Ga0453683_0206438
647 Ga0453683_0244061
648 Ga0453684_0325276
649 Ga0453684_1070453
650 Ga0451576_0009534
651 Ga0451576_0250206
652 Ga0495629_0000018
653 Ga0495629_0056080
654 Ga0495580_0000898
655 Ga0495580_0003454
656 Ga0495580_0679793
657 Ga0495582_0015633
658 Ga0495582_0036937
659 Ga0495639_0030409
660 Ga0495639_0049437
661 Ga0495662_0125773
662 Ga0495584_0178676
663 Ga0495594_0010459
664 Ga0495594_0044831
665 Ga0495642_0053180
666 Ga0495586_0019207
667 Ga0495622_0228243
668 Ga0495635_0001896
669 Ga0495659_0008222
670 Ga0495659_0025945
671 Ga0495647_0001181
672 Ga0495647_0067841
673 Ga0495658_0000126
674 Ga0495669_0156913
675 Ga0495613_0012135
676 Ga0495613_0136934
677 Ga0495581_0000742
678 Ga0495604_0075829
679 Ga0495674_0089638
680 Ga0495676_0139731
681 Ga0495680_0000044
682 Ga0495677_0135146
683 Ga0495685_107070
684 Ga0495614_0004129
685 Ga0496106_0105041
686 Ga0501042_0612616
687 Ga0501067_0234711
688 Ga0501076_0477964
689 Ga0501079_0242200
690 Ga0501045_0137055
691 nmdc:mga05p37_132809_c1
692 nmdc:mga05p37_222848_c1
693 nmdc:mga05p37_24843_c1
694 nmdc:mga05p37_26441_c1
695 nmdc:mga05p37_29344_c1
696 nmdc:mga09592_34280_c1
697 nmdc:mga09592_7729_c1
698 nmdc:mga0qj67_4924_c1
699 nmdc:mga06r32_37817_c1
700 nmdc:mga06r32_608473_c1
701 nmdc:mga08y16_27027_c1
702 nmdc:mga08y16_273527_c1
703 nmdc:mga08y16_32754_c1
704 nmdc:mga08y16_50264_c1
705 nmdc:mga0n895_365358_c1
706 nmdc:mga0n895_711648_c1
707 nmdc:mga0n895_87651_c1
708 nmdc:mga0n895_9143_c1
709 nmdc:mga0n895_99376_c1
710 nmdc:mga0rr50_114695_c1
711 nmdc:mga0rr50_115191_c1
712 nmdc:mga0rr50_119554_c1
713 nmdc:mga0rr50_123787_c1
714 nmdc:mga0rr50_166232_c1
715 nmdc:mga0rr50_194223_c1
716 nmdc:mga0rr50_467815_c1
717 nmdc:mga0rr50_506942_c1
718 nmdc:mga0rr50_63142_c1
719 nmdc:mga08x19_49419_c1
720 nmdc:mga0a205_207710_c1
721 nmdc:mga0a205_269_c1
722 nmdc:mga0a205_294410_c1
723 nmdc:mga0a205_35572_c1
724 nmdc:mga0a205_41785_c1
725 nmdc:mga0a205_5295_c1
726 nmdc:mga0a205_675502_c1
727 Ga0495619_0003476
728 Ga0501084_0545281
729 Ga0590071_000431
730 Ga0590074_002411
731 Ga0590075_000605
732 Ga0590075_006926
733 Ga0590077_000054
734 Ga0590077_010241
735 Ga0501082_0120553
736 Ga0530510_0311784

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00072

Response_reg

Response regulator receiver domain

5

116

0.98

PF00196

GerE

Bacterial regulatory proteins, luxR family

146

202

0.97

PF08281

Sigma70_r4_2

Sigma-70, region 4

147

190

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
3eul-assembly2.cif.gz_B structure of the signal receiver domain of the putative response regulator narl from mycobacterium tuberculosis 0.9589 2 121
3cz5-assembly2.cif.gz_B crystal structure of two-component response regulator, luxr family, from aurantimonas sp. si85-9a1 0.9573 1 137
3ulq-assembly1.cif.gz_B crystal structure of the anti-activator rapf complexed with the response regulator coma dna binding domain 0.9533 146 200
6ekh-assembly1.cif.gz_Y crystal structure of activated chey from methanoccocus maripaludis 0.9529 1 117
8a5s-assembly1.cif.gz_AAA crystal structure of light-activated dna-binding protein el222 from erythrobacter litoralis crystallized in dark, measured illuminated. 0.9518 146 206
ID Description Score Start End Superfamily
3cz5B00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9573 1 137 3.40.50.2300
3p7nA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9566 146 204 1.10.10.10
3eulC00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9552 3 118 3.40.50.2300
3ulqB00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9533 146 200 1.10.10.10
6ekhY00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9529 1 117 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A2K8SNF1-F1-model_v4 DNA-binding response regulator, NarL/FixJ family, containings REC and HTH domains 0.9716 3 130 GO:0000160
GO:0003677
AF-I7FCG4-F1-model_v4 Two component transcriptional regulator, LuxR family 0.9703 1 111 GO:0000160
GO:0003677
AF-A0A2V9CZ19-F1-model_v4 Response regulatory domain-containing protein 0.9681 1 120 GO:0000160
AF-A0A3M0WYU3-F1-model_v4 Response regulator 0.9671 2 120 GO:0000160
AF-A0A7V4MNU5-F1-model_v4 Response regulator 0.9656 1 101 GO:0000160

Map