F423938

General Info

Members Datasets Scaffolds Average Seq Length
366 275 294 507

Family's Representative Sequence

Representative Sequence 3300005466|Ga0070685_10001431|Ga0070685_100014312
Length 516
Sequence MDIRAAEISDILKAQIKNFGNDAQVSDVGQVLSVGDGIARVHGLDNCQAGEMVEFENGIKGMALNLERDNVGVVIFGDDRGIKEGDNVKRTSEIVSAPVGKGLLGRVVDALGEPIDGKGPLKNVAERRRVDVKAPGILPRKSVHEPMSTGLKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTILNQKAVNARGNESEKLYCIYVVIGQKRSTVAQVVKSLEERGALEYTIVVAATASEPAPLQYIAPFTGCVMGEWFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNKDHGSGSLTALPVIETQANDISAYIPTNVISITDGQVFFETDLFYQGIRPAVNVGLSVSRVGGSAQVKATKQVAGTLKSELSQYREMAAFAKFGSDLDATTQRMLNRGARLTQLLKQPQYSPLSMEEQVVVIYSGTRGYLDKIPTEAVGRFEQELLRVVRADNKQLLEDIRKEKDISKAGADGKKIEDSIKAVLDNFSKTFA

Samples

Sample ID Description Type Environment
1 2510917026 Rhizobium sp. CF80 Isolate Rhizosphere
2 2554235003 Agrobacterium tumefaciens WRT31 Isolate Rhizosphere
3 2558860242 Agrobacterium fabacearum P4 Isolate Rhizosphere
4 2582581283 Rhizobium sp. OK665 Isolate Rhizosphere
5 2582581299 Rhizobium leguminosarum OV483 Isolate Rhizosphere
6 2585427594 Rhizobium sp. YR528 Isolate Rhizosphere
7 2585427633 Neorhizobium galegae bv. officinalis HAMBI 1141 Isolate Nodule
8 2600255279 Rhizobium sp. NFIX01 Isolate Rhizoplane
9 2600255308 Rhizobium sp. NFIX02 Isolate Rhizoplane
10 2643221574 Brevundimonas sp. Root608 Isolate Unclassified
11 2643221580 Devosia sp. Root635 Isolate Unclassified
12 2643221583 Caulobacter sp. Root655 Isolate Unclassified
13 2643221591 Devosia sp. Root685 Isolate Unclassified
14 2643221599 Rhizobium sp. Root708 Isolate Unclassified
15 2643221607 Rhizobium sp. Root73 Isolate Unclassified
16 2643221629 Devosia sp. Root105 Isolate Unclassified
17 2643221636 Rhizobium sp. Root1204 Isolate Unclassified
18 2643221643 Rhizobium sp. Root1220 Isolate Unclassified
19 2643221653 Rhizobium sp. Root1240 Isolate Unclassified
20 2643221662 Devosia sp. Root413D1 Isolate Unclassified
21 2643221663 Brevundimonas sp. Root1279 Isolate Unclassified
22 2643221674 Devosia sp. Root436 Isolate Unclassified
23 2643221686 Rhizobium sp. Root1334 Isolate Unclassified
24 2643221689 Rhizobium sp. Root483D2 Isolate Unclassified
25 2643221693 Rhizobium sp. Root491 Isolate Unclassified
26 2643221699 Brevundimonas sp. Root1423 Isolate Unclassified
27 2643221719 Rhizobium sp. Root274 Isolate Unclassified
28 2643221733 Bosea sp. Root381 Isolate Unclassified
29 2643221734 Bosea sp. Root670 Isolate Unclassified
30 2643221736 Bosea sp. Root483D1 Isolate Unclassified
31 2713897090 Paracoccus sphaerophysae HAMBI 3106 Isolate Nodule
32 2738541293 Rhizobium sp. GV031 Isolate Unclassified
33 2738541317 Rhizobium halophytocola DSM 21600 Isolate Unclassified
34 2791355253 Rhizobium rhizosphaerae RD15 Isolate Rhizosphere
35 2808606387 Rhizobium sp. SJZ105 Isolate Rhizosphere
36 2818991272 Rhizobium sp. SLBN-4 Isolate Unclassified
37 2821123053 Rhizobium cellulosilyticum 1193 Isolate Unclassified
38 2829745981 Methylorubrum rhodinum DSM 2163 Isolate Rhizosphere
39 2838736955 Rhizobium cellulosilyticum SEMIA 448 Isolate Nodule
40 2840878972 Albibacillus kandeliae J95 Isolate Rhizosphere
41 2841760612 Bosea sp. Tri-49 Isolate Nodule
42 2841840854 Rhizobium cellulosilyticum SEMIA 444 Isolate Nodule
43 2841911363 Bosea caraganae RCAM04685 Isolate Nodule
44 2841917233 Bosea caraganae RCAM04680 Isolate Nodule
45 2842140634 Rhizobium cellulosilyticum SEMIA 452 Isolate Nodule
46 2844104063 Bosea sp. Tri-39 Isolate Nodule
47 2851182111 Bosea sp. Tri-44 Isolate Nodule
48 2851246043 Bosea sp. Tri-54 Isolate Nodule
49 2854681122 Luteovulum sphaeroides SCJ Isolate Unclassified
50 2855020534 Paracoccus endophyticus SYSUP0003 Isolate Stem Tuber
51 2857531043 Neorhizobium sp. R-72160 Isolate Unclassified
52 2861691609 Methylorubrum thiocyanatum DSM 11490 Isolate Rhizosphere
53 2894817345 Aureimonas psammosilenae YIM DR1026 Isolate Unclassified
54 2898795034 Rhodobacter sp. SGA-6-6 Isolate Rhizosphere
55 2899259804 Paracoccus aeridis JC501 Isolate Rhizosphere
56 2899845264 Agrobacterium fabacearum CNPSo 675 Isolate Unclassified
57 2913308742 Rhizobium halophytocola DSM 21600 Isolate Unclassified
58 2915650412 Ochrobactrum sp. CM-21-5 Isolate Rhizosphere
59 2917699015 Bosea sp. F3-2 Isolate Rhizosphere
60 2919114240 Agrobacterium tumefaciens 1457 Isolate Rhizosphere
61 2919679072 Pseudotabrizicola sp. 4114 Isolate Unclassified
62 2926760298 Agrobacterium tumefaciens SLBN-170 Isolate Rhizosphere
63 2932401849 Devosia sp. 2618 Isolate Rhizosphere
64 2933594066 Agrobacterium fabrum 35/80 Isolate Nodule
65 2964628898 Sinorhizobium meliloti USDA1191 Isolate Nodule
66 2979089926 Agrobacterium sp. SORGH_AS 745 Isolate Unclassified
67 2979095461 Agrobacterium tumefaciens SORGH_AS 749 Isolate Unclassified
68 2989776772 Rhizobium glycinendophyticum CL12 Isolate Unclassified
69 3000405567 Rhodobacteraceae bacterium LNNU 3342 Isolate Rhizosphere
70 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
71 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
72 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
73 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
74 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
75 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
76 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
77 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
78 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
79 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
80 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
81 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
82 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
83 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
84 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
85 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
86 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
87 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
88 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
89 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
90 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
91 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
92 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
93 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
94 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
95 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
96 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
97 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
98 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
99 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
100 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
101 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
102 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
103 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
104 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
105 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
106 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
107 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
108 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
109 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
110 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
111 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
112 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
113 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
114 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
115 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
116 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
117 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
118 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
119 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
120 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
121 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
122 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
123 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
124 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
125 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
126 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
127 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
128 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
129 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
130 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
131 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
132 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
133 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
134 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
135 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
136 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
137 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
138 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
139 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
140 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
141 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
142 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
143 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
144 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
145 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
146 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
147 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
148 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
149 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
150 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
151 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
152 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
153 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
154 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
155 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
156 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
157 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
158 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
159 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
160 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
161 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
162 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
163 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
164 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
165 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
166 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
167 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
168 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
169 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
170 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
171 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
172 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
173 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
174 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
175 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
176 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
177 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
178 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
179 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
180 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
181 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
182 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
183 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
184 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
185 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
186 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
187 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
188 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
189 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
190 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
191 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
192 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
193 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
194 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
195 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
196 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
197 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
198 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
199 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
200 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
201 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
202 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
203 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
204 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
205 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
206 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
207 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
208 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
209 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
210 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
211 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
212 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
213 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
214 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
215 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
216 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
217 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
218 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
219 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
220 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
221 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
222 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
223 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
224 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
225 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
226 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
227 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
228 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
229 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
230 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
231 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
232 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
233 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
234 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
235 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
236 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
237 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
238 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
239 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
240 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
241 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
242 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
243 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
244 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
245 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
246 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
247 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
248 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
249 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
250 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
251 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
252 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
253 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
254 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
255 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
256 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
257 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
258 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
259 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
260 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
261 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
262 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
263 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
264 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
265 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
266 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
267 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
268 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
269 3300059504 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 23R_SD_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
270 3300059505 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 24R_SD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
271 3300059623 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 66R_SW_T2_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
272 3300060346 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 169R_CW_T3_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
273 650716007 Agrobacterium fabacearum H13-3 Isolate Rhizosphere
274 8056875544 Rhizobium halophilum TRM95001 Isolate Rhizosphere
275 8057529695 Bosea vestrisii A18/4-2 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 77.87
Metatranscriptomes 2.46
Isolates 19.67

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.38
Nodule 4.64
Rhizoplane 1.91
Rhizosphere 68.85
Stem 0
Stem Tuber 0.27
Unclassified 13.93

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25150J39212_1000166 3300002774 Bacteria 37196
2 JGI25151J46595_10000036 3300003187 Bacteria 188770
3 JGI25151J46595_10001137 3300003187 Bacteria 19345
4 JGI25406J46586_10016247 3300003203 Bacteria 3109
5 JGI25165J46597_1004233 3300003214 Bacteria 3158
6 JGI25153J46596_10002324 3300003215 Bacteria 11044
7 Ga0006562J51391_1025098 3300003578 Bacteria 2722
8 Ga0055526_1004777 3300003771 Bacteria 8024
9 Ga0065165_1019736 3300005262 Bacteria 2395
10 Ga0070658_10006404 3300005327 Bacteria 9539
11 Ga0070683_100003972 3300005329 Bacteria 12112
12 Ga0070683_100051509 3300005329 Bacteria 3812
13 Ga0070690_100047889 3300005330 Bacteria 2720
14 Ga0070666_10015362 3300005335 Bacteria 4882
15 Ga0070680_100001019 3300005336 Bacteria 20015
16 Ga0070680_100008787 3300005336 Bacteria 7749
17 Ga0070680_100009302 3300005336 Bacteria 7546
18 Ga0070682_100002769 3300005337 Bacteria 9707
19 Ga0070660_100004357 3300005339 Bacteria 9775
20 Ga0070660_100040172 3300005339 Bacteria 3559
21 Ga0070689_100057729 3300005340 Bacteria 3013
22 Ga0070691_10011210 3300005341 Bacteria 4090
23 Ga0070661_100006121 3300005344 Bacteria 8282
24 Ga0070661_100042300 3300005344 Bacteria 3325
25 Ga0070668_100047629 3300005347 Bacteria 3296
26 Ga0070688_100022530 3300005365 Bacteria 3694
27 Ga0070659_100000399 3300005366 Bacteria 32898
28 Ga0070659_100040079 3300005366 Bacteria 3659
29 Ga0070667_100044411 3300005367 Bacteria 3732
30 Ga0070678_100037875 3300005456 Bacteria 3390
31 Ga0070681_10014830 3300005458 Bacteria 7749
32 Ga0070681_10141410 3300005458 Bacteria 2336
33 Ga0070685_10001431 3300005466 Bacteria 12516
34 Ga0070679_100020266 3300005530 Bacteria 6481
35 Ga0070679_100030209 3300005530 Bacteria 5349
36 Ga0070684_100013589 3300005535 Bacteria 6569
37 Ga0068853_100001173 3300005539 Bacteria 18642
38 Ga0068853_100007852 3300005539 Bacteria 8557
39 Ga0068853_100008775 3300005539 Bacteria 8132
40 Ga0070665_100000418 3300005548 Bacteria 62048
41 Ga0068855_100017295 3300005563 Bacteria 8676
42 Ga0068855_100026028 3300005563 Bacteria 6998
43 Ga0068855_100028512 3300005563 Bacteria 6678
44 Ga0070664_100028999 3300005564 Bacteria 4611
45 Ga0068856_100061155 3300005614 Bacteria 3720
46 Ga0068852_100071768 3300005616 Bacteria 3041
47 Ga0068852_100151284 3300005616 Bacteria 2158
48 Ga0068851_10022496 3300005834 Bacteria 3072
49 Ga0081455_10034678 3300005937 Bacteria 4518
50 Ga0081455_10039989 3300005937 Bacteria 4139
51 Ga0081540_1016119 3300005983 Bacteria 4696
52 Ga0081539_10001145 3300005985 Bacteria 48039
53 Ga0081539_10001481 3300005985 Bacteria 39789
54 Ga0081539_10003093 3300005985 Bacteria 21376
55 Ga0075365_10011698 3300006038 Bacteria 5172
56 Ga0075368_10013461 3300006042 Bacteria 3005
57 Ga0075363_100060446 3300006048 Bacteria 2040
58 Ga0075364_10003419 3300006051 Bacteria 9025
59 Ga0075367_10101280 3300006178 Bacteria 1761
60 Ga0075367_10106479 3300006178 Bacteria 1718
61 Ga0075428_100004902 3300006844 Bacteria 14861
62 Ga0075431_100005642 3300006847 Bacteria 12366
63 Ga0075429_100009279 3300006880 Bacteria 8541
64 Ga0079104_1000101 3300006946 Bacteria 125456
65 Ga0105240_10045561 3300009093 Bacteria 5562
66 Ga0111539_10012021 3300009094 Bacteria 10855
67 Ga0111539_10057301 3300009094 Bacteria 4627
68 Ga0114129_10007982 3300009147 Bacteria 15071
69 Ga0105237_10000067 3300009545 Bacteria 139093
70 Ga0105238_10006072 3300009551 Bacteria 11980
71 Ga0105239_10001775 3300010375 Bacteria 28359
72 Ga0105239_10075449 3300010375 Bacteria 3707
73 Ga0105239_10175026 3300010375 Bacteria 2400
74 Ga0157370_10000720 3300013104 Bacteria 41451
75 Ga0171462_1007 3300013250 Bacteria 417698
76 Ga0157372_10013747 3300013307 Bacteria 8650
77 Ga0157372_10041913 3300013307 Bacteria 5061
78 Ga0213872_10028392 3300021361 Bacteria 2566
79 Ga0224712_10023626 3300022467 Unclassified 2137
80 Ga0224712_10029458 3300022467 Unclassified 1972
81 Ga0207427_102409 3300025231 Bacteria 5067
82 Ga0207425_1000034 3300025245 Bacteria 227886
83 Ga0209026_1001029 3300025250 Bacteria 13706
84 Ga0209129_1000094 3300025258 Bacteria 172051
85 Ga0209233_1000838 3300025261 Bacteria 13595
86 Ga0209676_1000115 3300025292 Bacteria 205183
87 Ga0209025_1000184 3300025294 Bacteria 155611
88 Ga0209564_1000044 3300025295 Bacteria 381017
89 Ga0209758_1000159 3300025297 Bacteria 155588
90 Ga0209257_1000090 3300025304 Bacteria 274746
91 Ga0209257_1001133 3300025304 Bacteria 34214
92 Ga0207647_10018335 3300025904 Bacteria 4737
93 Ga0207705_10000551 3300025909 Bacteria 31496
94 Ga0207705_10002027 3300025909 Bacteria 15769
95 Ga0207705_10004083 3300025909 Bacteria 11082
96 Ga0207705_10101080 3300025909 Bacteria 2121
97 Ga0207707_10021312 3300025912 Bacteria 5665
98 Ga0207707_10032740 3300025912 Bacteria 4550
99 Ga0207695_10028625 3300025913 Bacteria 6171
100 Ga0207671_10000184 3300025914 Bacteria 95741
101 Ga0207657_10004413 3300025919 Bacteria 14883
102 Ga0207657_10019727 3300025919 Bacteria 6392
103 Ga0207657_10033379 3300025919 Bacteria 4640
104 Ga0207649_10003439 3300025920 Bacteria 8658
105 Ga0207652_10001554 3300025921 Bacteria 20200
106 Ga0207652_10031554 3300025921 Bacteria 4451
107 Ga0207690_10000695 3300025932 Bacteria 21662
108 Ga0207670_10001929 3300025936 Bacteria 10858
109 Ga0207667_10009399 3300025949 Bacteria 11521
110 Ga0207667_10014525 3300025949 Bacteria 8974
111 Ga0207667_10031531 3300025949 Bacteria 5721
112 Ga0207668_10005055 3300025972 Bacteria 7764
113 Ga0207640_10004100 3300025981 Bacteria 7875
114 Ga0207640_10005352 3300025981 Bacteria 6997
115 Ga0207639_10001130 3300026041 Bacteria 18129
116 Ga0207639_10004102 3300026041 Bacteria 9823
117 Ga0207639_10018129 3300026041 Bacteria 4998
118 Ga0207639_10183166 3300026041 Bacteria 1783
119 Ga0207702_10017675 3300026078 Bacteria 5901
120 Ga0207683_10066990 3300026121 Bacteria 3167
121 Ga0207698_10002141 3300026142 Bacteria 11659
122 Ga0209281_1000028 3300027111 Bacteria 440027
123 Ga0209983_1005983 3300027665 Bacteria 2508
124 Ga0209282_1049816 3300027666 Bacteria 2413
125 Ga0209813_10001018 3300027866 Bacteria 6303
126 Ga0209974_10008181 3300027876 Bacteria 3580
127 Ga0209974_10018446 3300027876 Bacteria 2315
128 Ga0207428_10004254 3300027907 Bacteria 13701
129 Ga0268266_10000003 3300028379 Bacteria 1701703
130 Ga0268266_10000219 3300028379 Bacteria 99898
131 Ga0268265_10002074 3300028380 Bacteria 15637
132 Ga0268264_10000091 3300028381 Bacteria 233338
133 Ga0268264_10008133 3300028381 Bacteria 8719
134 Ga0265319_1025821 3300028563 Bacteria 2099
135 Ga0265318_10010987 3300028577 Bacteria 3919
136 Ga0265332_10001446 3300031238 Bacteria 13299
137 Ga0265328_10000104 3300031239 Bacteria 41156
138 Ga0265328_10000136 3300031239 Bacteria 34764
139 Ga0265328_10010762 3300031239 Bacteria 3674
140 Ga0265340_10005880 3300031247 Bacteria 6783
141 Ga0265339_10003551 3300031249 Bacteria 10903
142 Ga0265339_10033009 3300031249 Bacteria 2918
143 Ga0265331_10000057 3300031250 Bacteria 175827
144 Ga0265331_10001090 3300031250 Bacteria 20906
145 Ga0265331_10002770 3300031250 Bacteria 11641
146 Ga0265327_10000110 3300031251 Bacteria 181251
147 Ga0265327_10000868 3300031251 Bacteria 44811
148 Ga0265327_10042328 3300031251 Bacteria 2446
149 Ga0265316_10003086 3300031344 Bacteria 16970
150 Ga0307513_10000873 3300031456 Bacteria 43622
151 Ga0307513_10014242 3300031456 Bacteria 9725
152 Ga0265314_10022314 3300031711 Bacteria 4851
153 Ga0265342_10000034 3300031712 Bacteria 145074
154 Ga0316576_10046311 3300031727 Bacteria 3147
155 Ga0316578_10051305 3300031728 Bacteria 2415
156 Ga0307516_10000030 3300031730 Bacteria 159694
157 Ga0307406_10000875 3300031901 Bacteria 16934
158 Ga0316593_10002349 3300032168 Bacteria 4449
159 Ga0316593_10007737 3300032168 Bacteria 2962
160 Ga0307510_10068568 3300033180 Bacteria 3558
161 Ga0373943_0020705 3300035170 Bacteria 3035
162 Ga0373931_0018841 3300035691 Bacteria 3436
163 Ga0373931_0044856 3300035691 Bacteria 2333
164 Ga0373927_0033821 3300035695 Bacteria 3326
165 Ga0373925_0041189 3300037068 Bacteria 3423
166 Ga0373925_0052423 3300037068 Bacteria 3048
167 Ga0395899_0000058 3300037312 Bacteria 213049
168 Ga0395899_0018337 3300037312 Bacteria 5320
169 Ga0395899_0044018 3300037312 Bacteria 3326
170 Ga0395900_0000056 3300037418 Bacteria 213077
171 Ga0395900_0007511 3300037418 Bacteria 11263
172 Ga0395900_0233932 3300037418 Bacteria 1846
173 Ga0395898_0000114 3300037466 Bacteria 213068
174 Ga0395898_0014115 3300037466 Bacteria 8211
175 Ga0395898_0031884 3300037466 Bacteria 5263
176 Ga0395905_0000053 3300037471 Bacteria 213077
177 Ga0395901_0000037 3300038443 Bacteria 213059
178 Ga0395901_0050917 3300038443 Bacteria 4303
179 Ga0395901_0150078 3300038443 Bacteria 2449
180 Ga0395901_0163223 3300038443 Bacteria 2339
181 Ga0400483_003588 3300039062 Bacteria 1883
182 Ga0400483_026969 3300039062 Bacteria 4377
183 Ga0400483_282374 3300039062 Bacteria 3368
184 Ga0436365_0119084 3300039437 Bacteria 2493
185 Ga0436360_0022371 3300039438 Bacteria 2138
186 Ga0436361_0388995 3300039447 Bacteria 4732
187 Ga0436363_1150208 3300039450 Bacteria 3350
188 Ga0436362_0481412 3300039453 Bacteria 1579
189 Ga0466957_0052490 3300044842 Bacteria 2483
190 Ga0451576_0002119 3300045051 Bacteria 30836
191 Ga0451576_0003094 3300045051 Bacteria 23346
192 Ga0495627_001509 3300046453 Bacteria 13385
193 Ga0495603_0036361 3300046455 Bacteria 2956
194 Ga0495585_0024268 3300046492 Bacteria 3478
195 Ga0495644_0006806 3300046523 Bacteria 4428
196 Ga0495640_0036909 3300046533 Bacteria 3450
197 Ga0495633_0005403 3300046558 Bacteria 7825
198 Ga0495656_0000457 3300046615 Bacteria 13306
199 Ga0495611_0001107 3300046648 Bacteria 14194
200 Ga0495659_0002978 3300046664 Bacteria 5432
201 Ga0495661_0035708 3300046665 Bacteria 3117
202 Ga0495588_0046099 3300046674 Bacteria 2236
203 Ga0495669_0000014 3300046684 Bacteria 140832
204 Ga0495669_0000081 3300046684 Bacteria 63806
205 Ga0495670_0000732 3300046691 Bacteria 15674
206 Ga0495671_0042460 3300046692 Bacteria 2285
207 Ga0495589_0007055 3300046794 Bacteria 5891
208 Ga0495672_0043362 3300047320 Bacteria 2706
209 Ga0495673_0000853 3300047469 Bacteria 28329
210 Ga0495686_0000512 3300047472 Bacteria 56017
211 Ga0496101_0186317 3300048904 Bacteria 1600
212 Ga0496104_0255413 3300048907 Bacteria 1665
213 Ga0496107_0009037 3300048910 Bacteria 6909
214 Ga0496111_0017439 3300048914 Bacteria 4964
215 Ga0496115_0006750 3300048918 Bacteria 8418
216 Ga0496117_0000031 3300048920 Bacteria 381048
217 Ga0496119_0024935 3300048922 Bacteria 4189
218 Ga0496121_0001011 3300048924 Bacteria 50244
219 Ga0496122_0000023 3300048925 Bacteria 381035
220 Ga0496123_0000027 3300048926 Bacteria 306773
221 Ga0496125_0000314 3300048928 Bacteria 95420
222 Ga0501031_0037981 3300049568 Bacteria 3143
223 Ga0501032_0000118 3300049569 Bacteria 66260
224 Ga0501032_0025810 3300049569 Bacteria 4048
225 Ga0501033_0004548 3300049570 Bacteria 11101
226 Ga0501034_0000237 3300049571 Bacteria 102104
227 Ga0501034_0016740 3300049571 Bacteria 7517
228 Ga0501034_0043407 3300049571 Bacteria 4550
229 Ga0501034_0046657 3300049571 Bacteria 4377
230 Ga0501034_0049135 3300049571 Bacteria 4257
231 Ga0501037_0000003 3300049573 Bacteria 261548
232 Ga0501037_0021129 3300049573 Bacteria 4809
233 Ga0501043_0000440 3300049579 Bacteria 37461
234 Ga0501043_0010725 3300049579 Bacteria 7177
235 Ga0501043_0159182 3300049579 Bacteria 1765
236 Ga0501046_0033793 3300049580 Bacteria 4130
237 Ga0501047_0007439 3300049581 Bacteria 10306
238 Ga0501047_0147372 3300049581 Bacteria 2230
239 Ga0501067_0000075 3300049583 Bacteria 56684
240 Ga0501067_0015078 3300049583 Bacteria 4276
241 Ga0501067_0030586 3300049583 Bacteria 2986
242 Ga0501068_0002738 3300049584 Bacteria 9370
243 Ga0501069_0000017 3300049585 Bacteria 141492
244 Ga0501070_0000177 3300049586 Bacteria 59246
245 Ga0501070_0016288 3300049586 Bacteria 6246
246 Ga0501070_0044112 3300049586 Bacteria 3711
247 Ga0501070_0162217 3300049586 Bacteria 1842
248 Ga0501071_0028979 3300049587 Bacteria 3904
249 Ga0501072_0047828 3300049588 Bacteria 3368
250 Ga0501073_0000006 3300049589 Bacteria 228761
251 Ga0501073_0002170 3300049589 Bacteria 14670
252 Ga0501074_0000038 3300049590 Bacteria 62674
253 Ga0501075_0003582 3300049591 Bacteria 10403
254 Ga0501076_0087399 3300049592 Bacteria 2506
255 Ga0501077_0000005 3300049593 Bacteria 120228
256 Ga0501079_0024107 3300049741 Bacteria 4669
257 Ga0501079_0044005 3300049741 Bacteria 3446
258 Ga0501080_0004712 3300049742 Bacteria 12174
259 Ga0501080_0034718 3300049742 Bacteria 4709
260 Ga0501083_0009100 3300049744 Bacteria 7015
261 Ga0501035_0000101 3300049822 Bacteria 106949
262 Ga0501035_0006106 3300049822 Bacteria 11338
263 Ga0501035_0179684 3300049822 Bacteria 1823
264 Ga0501044_0000010 3300049823 Bacteria 260121
265 Ga0501044_0016654 3300049823 Bacteria 7893
266 Ga0501044_0046012 3300049823 Bacteria 4519
267 Ga0501044_0060447 3300049823 Bacteria 3880
268 Ga0501044_0103187 3300049823 Bacteria 2866
269 nmdc:mga03n38_3803_c1 3300050490 Bacteria 4903
270 nmdc:mga00v17_3902_c1 3300050491 Bacteria 7690
271 nmdc:mga00v17_439_c1 3300050491 Bacteria 23341
272 nmdc:mga0yw44_10472_c1 3300050492 Bacteria 4740
273 nmdc:mga06z11_1627_c1 3300050494 Bacteria 8407
274 nmdc:mga05p37_108330_c1 3300050507 Bacteria 3418
275 nmdc:mga05p37_916_c1 3300050507 Bacteria 33331
276 nmdc:mga0qj67_2642_c2 3300050509 Bacteria 11550
277 nmdc:mga06r32_1826_c1 3300050510 Bacteria 19014
278 nmdc:mga08y16_325_c1 3300050511 Bacteria 43258
279 nmdc:mga0n895_28041_c1 3300050512 Bacteria 5354
280 nmdc:mga0a205_76804_c1 3300050515 Bacteria 3228
281 nmdc:mga0sz30_858_c1 3300050516 Bacteria 10973
282 Ga0495619_0039653 3300053085 Bacteria 3075
283 Ga0500643_002143 3300053087 Bacteria 10454
284 Ga0500643_002226 3300053087 Bacteria 10242
285 Ga0500641_0001206 3300053096 Bacteria 9217
286 Ga0500641_0008404 3300053096 Bacteria 3682
287 Ga0500604_0000775 3300053151 Bacteria 8784
288 Ga0500622_0011140 3300053156 Bacteria 4910
289 Ga0500634_0000026 3300053161 Bacteria 81353
290 Ga0500645_001656 3300053730 Bacteria 10949
291 Ga0587082_000130 3300059504 Bacteria 4600
292 Ga0587083_0000097 3300059505 Bacteria 5210
293 Ga0587101_003996 3300059623 Bacteria 1545
294 Ga0587111_0001232 3300060346 Bacteria 2981

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300053085 Ga0495619_0039653 Ga0495619_0039653_1808_3055 414
2 3300039453 Ga0436362_0481412 Ga0436362_0481412_180_1562 447
3 3300022467 Ga0224712_10023626 Ga0224712_100236261 457
4 3300059623 Ga0587101_003996 Ga0587101_003996_22_1446 461
5 3300049568 Ga0501031_0037981 Ga0501031_0037981_1509_3038 479
6 3300049569 Ga0501032_0025810 Ga0501032_0025810_468_1997 479
7 3300049579 Ga0501043_0000440 Ga0501043_0000440_35867_37396 479
8 3300049585 Ga0501069_0000017 Ga0501069_0000017_54498_56027 479
9 3300049586 Ga0501070_0000177 Ga0501070_0000177_52316_53845 479
10 3300049587 Ga0501071_0028979 Ga0501071_0028979_2307_3836 479
11 3300049590 Ga0501074_0000038 Ga0501074_0000038_23399_24928 479
12 3300049744 Ga0501083_0009100 Ga0501083_0009100_3587_5116 479
13 3300049822 Ga0501035_0000101 Ga0501035_0000101_69_1598 479
14 3300049822 Ga0501035_0179684 Ga0501035_0179684_257_1786 479
15 3300049823 Ga0501044_0000010 Ga0501044_0000010_133663_135192 479
16 3300049586 Ga0501070_0162217 Ga0501070_0162217_250_1779 480
17 3300049742 Ga0501080_0034718 Ga0501080_0034718_3076_4605 480
18 3300049823 Ga0501044_0046012 Ga0501044_0046012_2859_4388 480
19 3300039062 Ga0400483_003588 Ga0400483_003588_268_1809 491
20 3300025250 Ga0209026_1001029 Ga0209026_10010295 493
21 3300025292 Ga0209676_1000115 Ga0209676_1000115109 497
22 3300025304 Ga0209257_1000090 Ga0209257_100009091 497
23 3300031901 Ga0307406_10000875 Ga0307406_100008755 497
24 3300031730 Ga0307516_10000030 Ga0307516_1000003088 498
25 3300022467 Ga0224712_10029458 Ga0224712_100294583 500
26 3300049741 Ga0501079_0024107 Ga0501079_0024107_2324_3835 501
27 3300059504 Ga0587082_000130 Ga0587082_000130_2448_3953 501
28 iso_pu_bacteria 2713897090 2715498496 503
29 iso_pu_bacteria 2643221583 2643927006 504
30 iso_pu_bacteria 2643221663 2644351528 504
31 iso_pu_bacteria 2643221733 2644730205 504
32 iso_pu_bacteria 2643221736 2644742959 504
33 iso_pu_bacteria 2829745981 2829746641 504
34 iso_pu_bacteria 2841760612 2841765238 504
35 iso_pu_bacteria 2841911363 2841912306 504
36 iso_pu_bacteria 2841917233 2841919925 504
37 iso_pu_bacteria 2844104063 2844106848 504
38 iso_pu_bacteria 2851182111 2851185822 504
39 iso_pu_bacteria 2851246043 2851248888 504
40 iso_pu_bacteria 2861691609 2861695551 504
41 iso_pu_bacteria 2894817345 2894821113 504
42 iso_pu_bacteria 2917699015 2917702575 504
43 iso_pu_bacteria 8057529695 8057532755 504
44 iso_pu_bacteria 2510917026 2511173901 505
45 iso_pu_bacteria 2554235003 2554248786 505
46 iso_pu_bacteria 2558860242 2559295874 505
47 iso_pu_bacteria 2582581283 2585166815 505
48 iso_pu_bacteria 2582581299 2585228829 505
49 iso_pu_bacteria 2585427594 2585844801 505
50 iso_pu_bacteria 2585427633 2585997689 505
51 iso_pu_bacteria 2600255279 2601610760 505
52 iso_pu_bacteria 2600255308 2601747534 505
53 iso_pu_bacteria 2643221574 2643884444 505
54 iso_pu_bacteria 2643221580 2643911920 505
55 iso_pu_bacteria 2643221591 2643966473 505
56 iso_pu_bacteria 2643221599 2644002380 505
57 iso_pu_bacteria 2643221607 2644051949 505
58 iso_pu_bacteria 2643221629 2644165149 505
59 iso_pu_bacteria 2643221636 2644201495 505
60 iso_pu_bacteria 2643221643 2644240588 505
61 iso_pu_bacteria 2643221653 2644299962 505
62 iso_pu_bacteria 2643221662 2644346548 505
63 iso_pu_bacteria 2643221674 2644412412 505
64 iso_pu_bacteria 2643221686 2644484401 505
65 iso_pu_bacteria 2643221689 2644499868 505
66 iso_pu_bacteria 2643221693 2644521452 505
67 iso_pu_bacteria 2643221699 2644548926 505
68 iso_pu_bacteria 2643221719 2644658189 505
69 iso_pu_bacteria 2643221734 2644737826 505
70 iso_pu_bacteria 2738541293 2738805354 505
71 iso_pu_bacteria 2738541317 2738947551 505
72 iso_pu_bacteria 2791355253 2793281080 505
73 iso_pu_bacteria 2808606387 2808988302 505
74 iso_pu_bacteria 2818991272 2819244746 505
75 iso_pu_bacteria 2821123053 2821128635 505
76 iso_pu_bacteria 2838736955 2838741652 505
77 iso_pu_bacteria 2840878972 2840880323 505
78 iso_pu_bacteria 2841840854 2841845514 505
79 iso_pu_bacteria 2842140634 2842145217 505
80 iso_pu_bacteria 2854681122 2854684039 505
81 iso_pu_bacteria 2855020534 2855023382 505
82 iso_pu_bacteria 2857531043 2857534212 505
83 iso_pu_bacteria 2898795034 2898796842 505
84 iso_pu_bacteria 2899259804 2899262449 505
85 iso_pu_bacteria 2899845264 2899849219 505
86 iso_pu_bacteria 2913308742 2913312460 505
87 iso_pu_bacteria 2915650412 2915651882 505
88 iso_pu_bacteria 2919114240 2919118584 505
89 iso_pu_bacteria 2919679072 2919681938 505
90 iso_pu_bacteria 2926760298 2926762274 505
91 iso_pu_bacteria 2932401849 2932405855 505
92 iso_pu_bacteria 2933594066 2933597640 505
93 iso_pu_bacteria 2964628898 2964630485 505
94 iso_pu_bacteria 2979089926 2979092456 505
95 iso_pu_bacteria 2979095461 2979100153 505
96 iso_pu_bacteria 2989776772 2989779994 505
97 iso_pu_bacteria 3000405567 3000406461 505
98 iso_pu_bacteria 650716007 650741088 505
99 iso_pu_bacteria 8056875544 8056878158 505
100 3300005329 Ga0070683_100003972 Ga0070683_10000397211 507
101 3300005336 Ga0070680_100001019 Ga0070680_1000010196 507
102 3300005336 Ga0070680_100008787 Ga0070680_1000087873 507
103 3300005344 Ga0070661_100042300 Ga0070661_1000423001 507
104 3300005366 Ga0070659_100000399 Ga0070659_10000039919 507
105 3300005366 Ga0070659_100040079 Ga0070659_1000400793 507
106 3300005458 Ga0070681_10014830 Ga0070681_100148303 507
107 3300005530 Ga0070679_100030209 Ga0070679_1000302093 507
108 3300005535 Ga0070684_100013589 Ga0070684_1000135893 507
109 3300005548 Ga0070665_100000418 Ga0070665_10000041853 507
110 3300005563 Ga0068855_100028512 Ga0068855_1000285127 507
111 3300005614 Ga0068856_100061155 Ga0068856_1000611553 507
112 3300005985 Ga0081539_10003093 Ga0081539_100030933 507
113 3300009093 Ga0105240_10045561 Ga0105240_100455613 507
114 3300013307 Ga0157372_10041913 Ga0157372_100419133 507
115 3300025304 Ga0209257_1001133 Ga0209257_100113315 507
116 3300025909 Ga0207705_10002027 Ga0207705_100020275 507
117 3300025909 Ga0207705_10004083 Ga0207705_100040839 507
118 3300025912 Ga0207707_10021312 Ga0207707_100213122 507
119 3300025912 Ga0207707_10032740 Ga0207707_100327403 507
120 3300025913 Ga0207695_10028625 Ga0207695_100286255 507
121 3300025919 Ga0207657_10033379 Ga0207657_100333791 507
122 3300025921 Ga0207652_10001554 Ga0207652_100015549 507
123 3300025932 Ga0207690_10000695 Ga0207690_100006957 507
124 3300025949 Ga0207667_10014525 Ga0207667_100145253 507
125 3300026041 Ga0207639_10004102 Ga0207639_100041023 507
126 3300026078 Ga0207702_10017675 Ga0207702_100176753 507
127 3300027876 Ga0209974_10018446 Ga0209974_100184462 507
128 3300028379 Ga0268266_10000003 Ga0268266_100000031132 507
129 3300031238 Ga0265332_10001446 Ga0265332_100014465 507
130 3300031247 Ga0265340_10005880 Ga0265340_100058808 507
131 3300031249 Ga0265339_10003551 Ga0265339_100035514 507
132 3300031250 Ga0265331_10002770 Ga0265331_100027702 507
133 3300031712 Ga0265342_10000034 Ga0265342_10000034108 507
134 3300035170 Ga0373943_0020705 Ga0373943_0020705_115_1641 507
135 3300037068 Ga0373925_0041189 Ga0373925_0041189_838_2364 507
136 3300037068 Ga0373925_0052423 Ga0373925_0052423_997_2523 507
137 3300037312 Ga0395899_0044018 Ga0395899_0044018_1172_2698 507
138 3300037418 Ga0395900_0233932 Ga0395900_0233932_195_1721 507
139 3300037466 Ga0395898_0014115 Ga0395898_0014115_4425_5951 507
140 3300038443 Ga0395901_0163223 Ga0395901_0163223_619_2145 507
141 3300047472 Ga0495686_0000512 Ga0495686_0000512_24845_26377 507
142 3300048904 Ga0496101_0186317 Ga0496101_0186317_40_1566 507
143 3300048907 Ga0496104_0255413 Ga0496104_0255413_95_1621 507
144 3300048918 Ga0496115_0006750 Ga0496115_0006750_4828_6360 507
145 3300005329 Ga0070683_100051509 Ga0070683_1000515092 508
146 3300005330 Ga0070690_100047889 Ga0070690_1000478891 508
147 3300005335 Ga0070666_10015362 Ga0070666_100153623 508
148 3300005336 Ga0070680_100009302 Ga0070680_1000093023 508
149 3300005339 Ga0070660_100004357 Ga0070660_1000043572 508
150 3300005340 Ga0070689_100057729 Ga0070689_1000577292 508
151 3300005341 Ga0070691_10011210 Ga0070691_100112102 508
152 3300005347 Ga0070668_100047629 Ga0070668_1000476292 508
153 3300005365 Ga0070688_100022530 Ga0070688_1000225302 508
154 3300005367 Ga0070667_100044411 Ga0070667_1000444114 508
155 3300005456 Ga0070678_100037875 Ga0070678_1000378752 508
156 3300005466 Ga0070685_10001431 Ga0070685_100014312 508
157 3300005563 Ga0068855_100017295 Ga0068855_1000172958 508
158 3300005937 Ga0081455_10039989 Ga0081455_100399893 508
159 3300005985 Ga0081539_10001145 Ga0081539_100011454 508
160 3300006048 Ga0075363_100060446 Ga0075363_1000604462 508
161 3300006051 Ga0075364_10003419 Ga0075364_100034193 508
162 3300006178 Ga0075367_10101280 Ga0075367_101012802 508
163 3300006178 Ga0075367_10106479 Ga0075367_101064791 508
164 3300006844 Ga0075428_100004902 Ga0075428_1000049028 508
165 3300006847 Ga0075431_100005642 Ga0075431_1000056428 508
166 3300006880 Ga0075429_100009279 Ga0075429_10000927911 508
167 3300009094 Ga0111539_10012021 Ga0111539_100120215 508
168 3300009094 Ga0111539_10057301 Ga0111539_100573014 508
169 3300009147 Ga0114129_10007982 Ga0114129_1000798210 508
170 3300010375 Ga0105239_10075449 Ga0105239_100754493 508
171 3300021361 Ga0213872_10028392 Ga0213872_100283922 508
172 3300025904 Ga0207647_10018335 Ga0207647_100183351 508
173 3300025936 Ga0207670_10001929 Ga0207670_100019295 508
174 3300025972 Ga0207668_10005055 Ga0207668_100050558 508
175 3300026121 Ga0207683_10066990 Ga0207683_100669902 508
176 3300027907 Ga0207428_10004254 Ga0207428_100042547 508
177 3300028380 Ga0268265_10002074 Ga0268265_1000207411 508
178 3300028381 Ga0268264_10000091 Ga0268264_10000091188 508
179 3300028381 Ga0268264_10008133 Ga0268264_100081336 508
180 3300031239 Ga0265328_10000104 Ga0265328_1000010411 508
181 3300031239 Ga0265328_10000136 Ga0265328_1000013633 508
182 3300031239 Ga0265328_10010762 Ga0265328_100107622 508
183 3300031249 Ga0265339_10033009 Ga0265339_100330093 508
184 3300031250 Ga0265331_10001090 Ga0265331_1000109012 508
185 3300031251 Ga0265327_10000110 Ga0265327_1000011026 508
186 3300031251 Ga0265327_10000868 Ga0265327_100008683 508
187 3300031251 Ga0265327_10042328 Ga0265327_100423282 508
188 3300031344 Ga0265316_10003086 Ga0265316_100030865 508
189 3300031456 Ga0307513_10000873 Ga0307513_1000087322 508
190 3300031456 Ga0307513_10014242 Ga0307513_100142422 508
191 3300031711 Ga0265314_10022314 Ga0265314_100223143 508
192 3300032168 Ga0316593_10007737 Ga0316593_100077372 508
193 3300033180 Ga0307510_10068568 Ga0307510_100685682 508
194 3300035691 Ga0373931_0018841 Ga0373931_0018841_787_2316 508
195 3300035691 Ga0373931_0044856 Ga0373931_0044856_552_2084 508
196 3300035695 Ga0373927_0033821 Ga0373927_0033821_1439_2968 508
197 3300039062 Ga0400483_026969 Ga0400483_026969_521_2053 508
198 3300039437 Ga0436365_0119084 Ga0436365_0119084_285_1820 508
199 3300039438 Ga0436360_0022371 Ga0436360_0022371_461_1990 508
200 3300039447 Ga0436361_0388995 Ga0436361_0388995_416_1945 508
201 3300039450 Ga0436363_1150208 Ga0436363_1150208_427_1956 508
202 3300045051 Ga0451576_0003094 Ga0451576_0003094_6327_7859 508
203 3300046453 Ga0495627_001509 Ga0495627_001509_1407_2939 508
204 3300046455 Ga0495603_0036361 Ga0495603_0036361_94_1623 508
205 3300046492 Ga0495585_0024268 Ga0495585_0024268_1113_2642 508
206 3300046523 Ga0495644_0006806 Ga0495644_0006806_2371_3900 508
207 3300046533 Ga0495640_0036909 Ga0495640_0036909_1293_2822 508
208 3300046558 Ga0495633_0005403 Ga0495633_0005403_2511_4040 508
209 3300046615 Ga0495656_0000457 Ga0495656_0000457_11746_13275 508
210 3300046648 Ga0495611_0001107 Ga0495611_0001107_1850_3379 508
211 3300046664 Ga0495659_0002978 Ga0495659_0002978_3309_4838 508
212 3300046665 Ga0495661_0035708 Ga0495661_0035708_107_1636 508
213 3300046674 Ga0495588_0046099 Ga0495588_0046099_129_1664 508
214 3300046684 Ga0495669_0000014 Ga0495669_0000014_43771_45306 508
215 3300046684 Ga0495669_0000081 Ga0495669_0000081_54710_56245 508
216 3300046691 Ga0495670_0000732 Ga0495670_0000732_11648_13177 508
217 3300046692 Ga0495671_0042460 Ga0495671_0042460_700_2229 508
218 3300046794 Ga0495589_0007055 Ga0495589_0007055_1733_3265 508
219 3300047320 Ga0495672_0043362 Ga0495672_0043362_1031_2581 508
220 3300047469 Ga0495673_0000853 Ga0495673_0000853_20953_22485 508
221 3300048910 Ga0496107_0009037 Ga0496107_0009037_2493_4025 508
222 3300048924 Ga0496121_0001011 Ga0496121_0001011_44362_45894 508
223 3300049569 Ga0501032_0000118 Ga0501032_0000118_15062_16612 508
224 3300049570 Ga0501033_0004548 Ga0501033_0004548_823_2355 508
225 3300049571 Ga0501034_0016740 Ga0501034_0016740_1893_3425 508
226 3300049571 Ga0501034_0049135 Ga0501034_0049135_1579_3114 508
227 3300049573 Ga0501037_0021129 Ga0501037_0021129_1827_3377 508
228 3300049579 Ga0501043_0010725 Ga0501043_0010725_1531_3081 508
229 3300049580 Ga0501046_0033793 Ga0501046_0033793_1963_3498 508
230 3300049581 Ga0501047_0007439 Ga0501047_0007439_29_1564 508
231 3300049581 Ga0501047_0147372 Ga0501047_0147372_114_1646 508
232 3300049583 Ga0501067_0000075 Ga0501067_0000075_11646_13196 508
233 3300049583 Ga0501067_0015078 Ga0501067_0015078_1775_3310 508
234 3300049583 Ga0501067_0030586 Ga0501067_0030586_1080_2609 508
235 3300049584 Ga0501068_0002738 Ga0501068_0002738_3226_4776 508
236 3300049588 Ga0501072_0047828 Ga0501072_0047828_194_1723 508
237 3300049589 Ga0501073_0000006 Ga0501073_0000006_116674_118224 508
238 3300049589 Ga0501073_0002170 Ga0501073_0002170_11748_13283 508
239 3300049591 Ga0501075_0003582 Ga0501075_0003582_7560_9089 508
240 3300049592 Ga0501076_0087399 Ga0501076_0087399_240_1772 508
241 3300049593 Ga0501077_0000005 Ga0501077_0000005_74789_76339 508
242 3300049741 Ga0501079_0044005 Ga0501079_0044005_46_1575 508
243 3300049823 Ga0501044_0016654 Ga0501044_0016654_2014_3546 508
244 3300050490 nmdc:mga03n38_3803_c1 nmdc:mga03n38_3803_c1_1279_2808 508
245 3300050491 nmdc:mga00v17_3902_c1 nmdc:mga00v17_3902_c1_1192_2721 508
246 3300050492 nmdc:mga0yw44_10472_c1 nmdc:mga0yw44_10472_c1_1966_3495 508
247 3300050494 nmdc:mga06z11_1627_c1 nmdc:mga06z11_1627_c1_5921_7450 508
248 3300050507 nmdc:mga05p37_108330_c1 nmdc:mga05p37_108330_c1_268_1797 508
249 3300050507 nmdc:mga05p37_916_c1 nmdc:mga05p37_916_c1_6846_8375 508
250 3300050509 nmdc:mga0qj67_2642_c2 nmdc:mga0qj67_2642_c2_5057_6586 508
251 3300050510 nmdc:mga06r32_1826_c1 nmdc:mga06r32_1826_c1_10611_12140 508
252 3300050511 nmdc:mga08y16_325_c1 nmdc:mga08y16_325_c1_6881_8410 508
253 3300050512 nmdc:mga0n895_28041_c1 nmdc:mga0n895_28041_c1_171_1700 508
254 3300050515 nmdc:mga0a205_76804_c1 nmdc:mga0a205_76804_c1_893_2422 508
255 3300053087 Ga0500643_002143 Ga0500643_002143_7336_8868 508
256 3300053087 Ga0500643_002226 Ga0500643_002226_4234_5769 508
257 3300053096 Ga0500641_0001206 Ga0500641_0001206_7480_9015 508
258 3300053096 Ga0500641_0008404 Ga0500641_0008404_1543_3075 508
259 3300053156 Ga0500622_0011140 Ga0500622_0011140_299_1828 508
260 3300053730 Ga0500645_001656 Ga0500645_001656_8596_10128 508
261 3300002774 JGI25150J39212_1000166 JGI25150J39212_100016614 509
262 3300003187 JGI25151J46595_10000036 JGI25151J46595_1000003638 509
263 3300003187 JGI25151J46595_10001137 JGI25151J46595_1000113718 509
264 3300003203 JGI25406J46586_10016247 JGI25406J46586_100162474 509
265 3300003214 JGI25165J46597_1004233 JGI25165J46597_10042333 509
266 3300003215 JGI25153J46596_10002324 JGI25153J46596_1000232412 509
267 3300003578 Ga0006562J51391_1025098 Ga0006562J51391_10250983 509
268 3300003771 Ga0055526_1004777 Ga0055526_10047777 509
269 3300005262 Ga0065165_1019736 Ga0065165_10197362 509
270 3300005327 Ga0070658_10006404 Ga0070658_100064045 509
271 3300005337 Ga0070682_100002769 Ga0070682_1000027693 509
272 3300005339 Ga0070660_100040172 Ga0070660_1000401723 509
273 3300005344 Ga0070661_100006121 Ga0070661_1000061212 509
274 3300005458 Ga0070681_10141410 Ga0070681_101414102 509
275 3300005530 Ga0070679_100020266 Ga0070679_1000202663 509
276 3300005539 Ga0068853_100001173 Ga0068853_10000117310 509
277 3300005539 Ga0068853_100007852 Ga0068853_1000078527 509
278 3300005539 Ga0068853_100008775 Ga0068853_1000087756 509
279 3300005563 Ga0068855_100026028 Ga0068855_1000260285 509
280 3300005564 Ga0070664_100028999 Ga0070664_1000289993 509
281 3300005616 Ga0068852_100071768 Ga0068852_1000717682 509
282 3300005616 Ga0068852_100151284 Ga0068852_1001512842 509
283 3300005834 Ga0068851_10022496 Ga0068851_100224963 509
284 3300005937 Ga0081455_10034678 Ga0081455_100346783 509
285 3300005983 Ga0081540_1016119 Ga0081540_10161193 509
286 3300005985 Ga0081539_10001481 Ga0081539_1000148132 509
287 3300006038 Ga0075365_10011698 Ga0075365_100116982 509
288 3300006042 Ga0075368_10013461 Ga0075368_100134612 509
289 3300006946 Ga0079104_1000101 Ga0079104_1000101106 509
290 3300009545 Ga0105237_10000067 Ga0105237_1000006782 509
291 3300009551 Ga0105238_10006072 Ga0105238_100060721 509
292 3300010375 Ga0105239_10001775 Ga0105239_1000177521 509
293 3300010375 Ga0105239_10175026 Ga0105239_101750262 509
294 3300013104 Ga0157370_10000720 Ga0157370_1000072041 509
295 3300013250 Ga0171462_1007 Ga0171462_1007331 509
296 3300013307 Ga0157372_10013747 Ga0157372_100137478 509
297 3300025231 Ga0207427_102409 Ga0207427_1024092 509
298 3300025245 Ga0207425_1000034 Ga0207425_100003498 509
299 3300025258 Ga0209129_1000094 Ga0209129_100009443 509
300 3300025261 Ga0209233_1000838 Ga0209233_10008384 509
301 3300025294 Ga0209025_1000184 Ga0209025_1000184127 509
302 3300025295 Ga0209564_1000044 Ga0209564_1000044351 509
303 3300025297 Ga0209758_1000159 Ga0209758_1000159127 509
304 3300025909 Ga0207705_10000551 Ga0207705_1000055115 509
305 3300025909 Ga0207705_10101080 Ga0207705_101010802 509
306 3300025914 Ga0207671_10000184 Ga0207671_1000018465 509
307 3300025919 Ga0207657_10004413 Ga0207657_100044135 509
308 3300025919 Ga0207657_10019727 Ga0207657_100197274 509
309 3300025920 Ga0207649_10003439 Ga0207649_100034393 509
310 3300025921 Ga0207652_10031554 Ga0207652_100315542 509
311 3300025949 Ga0207667_10009399 Ga0207667_100093995 509
312 3300025949 Ga0207667_10031531 Ga0207667_100315313 509
313 3300025981 Ga0207640_10004100 Ga0207640_100041003 509
314 3300025981 Ga0207640_10005352 Ga0207640_100053525 509
315 3300026041 Ga0207639_10001130 Ga0207639_1000113011 509
316 3300026041 Ga0207639_10018129 Ga0207639_100181293 509
317 3300026041 Ga0207639_10183166 Ga0207639_101831662 509
318 3300026142 Ga0207698_10002141 Ga0207698_100021415 509
319 3300027111 Ga0209281_1000028 Ga0209281_1000028116 509
320 3300027665 Ga0209983_1005983 Ga0209983_10059831 509
321 3300027666 Ga0209282_1049816 Ga0209282_10498162 509
322 3300027866 Ga0209813_10001018 Ga0209813_100010186 509
323 3300027876 Ga0209974_10008181 Ga0209974_100081813 509
324 3300028379 Ga0268266_10000219 Ga0268266_1000021969 509
325 3300028563 Ga0265319_1025821 Ga0265319_10258212 509
326 3300028577 Ga0265318_10010987 Ga0265318_100109873 509
327 3300031250 Ga0265331_10000057 Ga0265331_1000005779 509
328 3300031727 Ga0316576_10046311 Ga0316576_100463113 509
329 3300031728 Ga0316578_10051305 Ga0316578_100513052 509
330 3300032168 Ga0316593_10002349 Ga0316593_100023494 509
331 3300037312 Ga0395899_0000058 Ga0395899_0000058_122539_124068 509
332 3300037312 Ga0395899_0018337 Ga0395899_0018337_3430_4965 509
333 3300037418 Ga0395900_0000056 Ga0395900_0000056_122567_124096 509
334 3300037418 Ga0395900_0007511 Ga0395900_0007511_3772_5307 509
335 3300037466 Ga0395898_0000114 Ga0395898_0000114_122558_124087 509
336 3300037466 Ga0395898_0031884 Ga0395898_0031884_2123_3658 509
337 3300037471 Ga0395905_0000053 Ga0395905_0000053_88982_90511 509
338 3300038443 Ga0395901_0000037 Ga0395901_0000037_122567_124096 509
339 3300038443 Ga0395901_0050917 Ga0395901_0050917_2597_4132 509
340 3300038443 Ga0395901_0150078 Ga0395901_0150078_376_1911 509
341 3300039062 Ga0400483_282374 Ga0400483_282374_1438_2976 509
342 3300044842 Ga0466957_0052490 Ga0466957_0052490_20_1552 509
343 3300045051 Ga0451576_0002119 Ga0451576_0002119_12753_14291 509
344 3300048914 Ga0496111_0017439 Ga0496111_0017439_358_1893 509
345 3300048920 Ga0496117_0000031 Ga0496117_0000031_88156_89685 509
346 3300048922 Ga0496119_0024935 Ga0496119_0024935_1332_2861 509
347 3300048925 Ga0496122_0000023 Ga0496122_0000023_88156_89685 509
348 3300048926 Ga0496123_0000027 Ga0496123_0000027_291351_292880 509
349 3300048928 Ga0496125_0000314 Ga0496125_0000314_6304_7839 509
350 3300049571 Ga0501034_0000237 Ga0501034_0000237_73089_74627 509
351 3300049571 Ga0501034_0043407 Ga0501034_0043407_420_1955 509
352 3300049571 Ga0501034_0046657 Ga0501034_0046657_848_2383 509
353 3300049573 Ga0501037_0000003 Ga0501037_0000003_257420_258949 509
354 3300049579 Ga0501043_0159182 Ga0501043_0159182_171_1700 509
355 3300049586 Ga0501070_0016288 Ga0501070_0016288_638_2167 509
356 3300049586 Ga0501070_0044112 Ga0501070_0044112_1742_3274 509
357 3300049742 Ga0501080_0004712 Ga0501080_0004712_9953_11482 509
358 3300049822 Ga0501035_0006106 Ga0501035_0006106_9098_10627 509
359 3300049823 Ga0501044_0060447 Ga0501044_0060447_719_2248 509
360 3300049823 Ga0501044_0103187 Ga0501044_0103187_414_1949 509
361 3300050491 nmdc:mga00v17_439_c1 nmdc:mga00v17_439_c1_7867_9396 509
362 3300050516 nmdc:mga0sz30_858_c1 nmdc:mga0sz30_858_c1_3606_5135 509
363 3300053151 Ga0500604_0000775 Ga0500604_0000775_3971_5506 509
364 3300053161 Ga0500634_0000026 Ga0500634_0000026_6185_7720 509
365 3300059505 Ga0587083_0000097 Ga0587083_0000097_553_2082 509
366 3300060346 Ga0587111_0001232 Ga0587111_0001232_441_1973 509

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00006

ATP-synt_ab

ATP synthase alpha/beta family, nucleotide-binding domain

150

373

0.98

PF02874

ATP-synt_ab_N

ATP synthase alpha/beta family, beta-barrel domain

24

92

0.98

PF00306

ATP-synt_ab_C

ATP synthase alpha/beta chain, C terminal domain

380

511

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
8h9l-assembly1.cif.gz_C human atp synthase f1 domain, state 3a 0.9555 24 507
4tsf-assembly1.cif.gz_C the pathway of binding of the intrinsically disordered mitochondrial inhibitor protein to f1-atpase 0.9555 25 509
6rdv-assembly1.cif.gz_T cryo-em structure of polytomella f-atp synthase, rotary substate 1e, focussed refinement of f1 head and rotor 0.954 29 503
8h9p-assembly1.cif.gz_A human atp synthase f1 domain, state 3b 0.9532 28 509
7ajd-assembly1.cif.gz_AC bovine atp synthase dimer state1:state3 0.9529 23 507
ID Description Score Start End Superfamily
af_Q9XPJ9_41_108_2.40.30.20 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3; 0.977 26 91 2.40.30.20
4xd7B01 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3; 0.9752 28 94 2.40.30.20
af_P56757_373_501_1.20.150.20 Mainly Alpha;Up-down Bundle;Lysin;ATP synthase alpha/beta chain, C-terminal domain 0.9744 380 506 1.20.150.20
3oaaB01 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3; 0.9727 28 93 2.40.30.20
af_P0ABB0_383_513_1.20.150.20 Mainly Alpha;Up-down Bundle;Lysin;ATP synthase alpha/beta chain, C-terminal domain 0.9725 381 509 1.20.150.20
ID Description Score Start End GO Terms
AF-A0A074TK49-F1-model_v4 deleted 0.9802 375 504
AF-A0A7V7X9V8-F1-model_v4 deleted 0.9787 371 509
AF-A0A536BQL6-F1-model_v4 ATP synthase alpha subunit C-terminal domain-containing protein 0.9773 397 507 GO:0005524
GO:0043531
GO:0045261
GO:0046933
AF-A0A656Z261-F1-model_v4 deleted 0.9731 384 507
AF-A0A0M0K8M8-F1-model_v4 ATP synthase subunit mitochondrial-like protein 0.9711 387 509 GO:0005524
GO:0043531
GO:0045261
GO:0046933

Feature Viewer

pLDDT pTM Quality
81.86 0.83 High
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Predicted Structure (AlphaFold2)

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