F423697

General Info

Members Datasets Scaffolds Average Seq Length
365 225 312 303

Family's Representative Sequence

Representative Sequence 3300025304|Ga0209257_1051841|Ga0209257_10518411
Length 363
Sequence MVAREGPVLGGSILAHAFTPQVTSGGAARALDTVRTALRECDPIPARTRRGHLQTRPSEPNTLRLSGSITALATPFTATGEIDLDAWNRLLDGQLAVGTQGIVVAGSTGEAAALFDAEYDTLLRTAVERVAGRIPVLAGTGLSNTAKTIELTRRVAMLGADAALIVTPPYVRPTQAGLVAHYRAIADDGALPVVLYNVPGRTGGDLLPETVAELASHPRIVGIKEARSEPERMAALLELKDDGFAILSGDDPTACRAMFAGADGVISVASNVVPRAFRRLADLARAGKREAAIALDARLQTTYDFLGVEPNPIPVKALLARQGIGHGLRLPLLPLSAAHTGTAATIAALVTELELECHESLVA

Samples

Sample ID Description Type Environment
1 2524614729 Arenimonas oryziterrae YC6267, DSM 21050 Isolate Rhizosphere
2 2547132130 Stenotrophomonas maltophilia RR-10 Isolate Unclassified
3 2571042365 Lysobacter oryzae DSM 21044 Isolate Rhizosphere
4 2576861471 Stenotrophomonas rhizophila DSM 14405 Isolate Rhizosphere
5 2627854209 Arenimonas oryziterrae YC6267, DSM 21050 Isolate Rhizosphere
6 2643221559 Lysobacter sp. Root559 Isolate Unclassified
7 2643221573 Lysobacter sp. Root604 Isolate Unclassified
8 2643221579 Pseudoxanthomonas sp. Root630 Isolate Unclassified
9 2643221581 Pseudoxanthomonas sp. Root65 Isolate Unclassified
10 2643221586 Lysobacter sp. Root667 Isolate Unclassified
11 2643221593 Lysobacter sp. Root690 Isolate Unclassified
12 2643221612 Lysobacter sp. Root76 Isolate Unclassified
13 2643221695 Lysobacter sp. Root494 Isolate Unclassified
14 2643221720 Lysobacter sp. Root916 Isolate Unclassified
15 2643221727 Lysobacter sp. Root96 Isolate Unclassified
16 2643221728 Lysobacter sp. Root983 Isolate Unclassified
17 2747842428 Stenotrophomonas sp. WCS2014-113 Isolate Unclassified
18 2747842501 Xanthomonas sp. WCS2014-23 Isolate Unclassified
19 2765235840 Stenotrophomonas maltophilia AA1 Isolate Unclassified
20 2816332141 Stenotrophomonas muris 1190 (v2) (version 2) Isolate Unclassified
21 2818991457 Xanthomonas translucens 569 Isolate Unclassified
22 2842391507 Stenotrophomonas maltophilia SEMIA 4027 Isolate Nodule
23 2842757796 Stenotrophomonas sp. R-72406 Isolate Unclassified
24 2842780639 Pseudoxanthomonas sp. R-71986 Isolate Unclassified
25 2852649853 Stenotrophomonas sp. JAI102 Isolate Rhizosphere
26 2852684882 Xanthomonas sp. JAI131 Isolate Rhizosphere
27 2857442823 Stenotrophomonas sp. R-74235 Isolate Unclassified
28 2874220319 Stenotrophomonas maltophilia PS5 Isolate Unclassified
29 2894414249 Luteimonas sp. LNNU 24178 Isolate Rhizosphere
30 2919089067 Stenotrophomonas sp. 1337 Isolate Rhizosphere
31 2919130084 Xanthomonas sp. 1678 Isolate Rhizosphere
32 2919134579 Stenotrophomonas geniculata 1733 Isolate Rhizosphere
33 2923516293 Pseudoxanthomonas mexicana SLBN-89 Isolate Rhizosphere
34 2928496128 Stenotrophomonas indicatrix 1163 Isolate Unclassified
35 2929195423 Xanthomonas sp. R-73098 Hybrid assembly Isolate Unclassified
36 2931380184 Stenotrophomonas sp. DR822 Isolate Rhizosphere
37 2937610967 Stenotrophomonas maltophilia EP20 Isolate Unclassified
38 2939589442 Stenotrophomonas rhizophila 716 Isolate Rhizosphere
39 2939622612 Stenotrophomonas sp. 2619 Isolate Rhizosphere
40 2939626828 Stenotrophomonas sp. 2694 Isolate Rhizosphere
41 2941475908 Stenotrophomonas rhizophila 2680 Isolate Rhizosphere
42 2941489479 Lysobacter enzymogenes 2943 Isolate Rhizosphere
43 2961047084 Stenotrophomonas maltophilia EP5 Isolate Unclassified
44 2961064222 Stenotrophomonas maltophilia EP13 Isolate Unclassified
45 2974307012 Stenotrophomonas sp. SORGH_AS_0282 Isolate Unclassified
46 2977247770 Stenotrophomonas rhizophila SORGH_AS 457 Isolate Unclassified
47 2984514374 Stenotrophomonas sp. SORGH_AS282 Isolate Aerial Root
48 2987605356 Stenotrophomonas sp. ATCM1_4 Isolate Unclassified
49 2995948881 Lysobacter enzymogenes B25 Isolate Unclassified
50 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
51 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
52 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
53 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
54 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
55 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
56 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
57 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
58 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
59 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
60 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
61 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
62 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
63 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
64 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
65 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
66 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
67 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
68 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
69 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
70 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
71 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
72 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
73 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
74 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
75 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
76 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
77 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
78 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
79 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
80 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
81 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
82 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
83 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
84 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
85 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
86 3300012500 Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.old.080610 Metagenome Rhizosphere
87 3300012512 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.old.270510 Metagenome Rhizosphere
88 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
89 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
90 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
91 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
92 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
93 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
94 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
95 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
96 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
97 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
98 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
99 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
100 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
101 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
102 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
103 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
104 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
105 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
106 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
107 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
108 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
109 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
110 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
111 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
128 3300027424 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S PM (SPAdes) (version 2) Metagenome Rhizosphere
129 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
130 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
131 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
132 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
133 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
135 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
136 3300030735 Rhizosphere soil microbial communities in a healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 4 Metagenome Rhizosphere
137 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
138 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
139 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
140 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
141 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
142 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
143 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
144 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
145 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
146 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
147 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
148 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
149 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
150 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
151 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
152 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
153 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
154 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
155 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
156 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
157 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
158 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
159 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
160 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
161 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
162 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
163 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
164 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
165 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
166 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
167 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
168 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
169 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
170 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
171 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
172 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
173 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
174 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
175 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
176 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
177 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
178 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
179 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
180 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
181 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
182 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
183 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
184 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
185 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
186 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
187 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
188 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
189 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
190 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
191 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
192 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
193 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
194 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
195 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
196 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
197 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
198 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
199 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
200 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
201 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
202 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
203 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
204 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
205 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
206 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
207 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
208 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
209 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
210 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
211 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
212 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
213 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
214 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
215 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
216 3300049672 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_A_3_drought Metagenome Rhizosphere
217 3300049674 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_A_3_drought Metagenome Rhizosphere
218 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
219 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
220 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
221 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
222 8003014200 Lysobacter changpingensis Cm-3-T8 Isolate Rhizosphere
223 8021622325 Xanthomonas sp. LMG12462 Isolate Rhizosphere
224 8021626552 Xanthomonas sp. LMG12460 Isolate Rhizosphere
225 8021648035 Xanthomonas sp. LMG 12461 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 85.48
Metatranscriptomes 0
Isolates 14.52

Biome Distribution

Category Percentage (%)
Aerial Root 0.27
Bulb 0
Endosphere 17.26
Nodule 0.27
Rhizoplane 3.29
Rhizosphere 55.07
Stem 0
Stem Tuber 0
Unclassified 23.84

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25150J39212_1000280 3300002774 Bacteria 26822
2 JGI25151J46595_10000207 3300003187 Bacteria 71940
3 JGI25151J46595_10000680 3300003187 Bacteria 28727
4 JGI25153J46596_10000146 3300003215 Bacteria 71940
5 rootH2_10007917 3300003320 Bacteria 3901
6 rootH1_10093437 3300003323 Bacteria 3216
7 Ga0055526_1000426 3300003771 Bacteria 33925
8 Ga0055526_1011093 3300003771 Bacteria 4108
9 Ga0055537_1000452 3300003773 Bacteria 25967
10 Ga0055537_1000785 3300003773 Bacteria 15946
11 Ga0055524_1000453 3300003775 Bacteria 33925
12 Ga0055524_1032948 3300003775 Bacteria 1459
13 Ga0055536_1001684 3300003781 Bacteria 13103
14 Ga0055536_1003442 3300003781 Bacteria 8490
15 Ga0055536_1027739 3300003781 Bacteria 1558
16 Ga0055536_1032048 3300003781 Bacteria 1366
17 Ga0055534_1000291 3300003784 Bacteria 33925
18 Ga0055534_1000559 3300003784 Bacteria 19689
19 Ga0055528_1000425 3300003790 Bacteria 33925
20 Ga0055528_1004542 3300003790 Bacteria 6656
21 Ga0055531_10033856 3300003794 Bacteria 1635
22 Ga0055531_10035526 3300003794 Bacteria 1558
23 Ga0055531_10045486 3300003794 Bacteria 1218
24 Ga0058692_1000002 3300003856 Bacteria 508401
25 Ga0058692_1000006 3300003856 Bacteria 398109
26 Ga0065704_10015257 3300005289 Bacteria 1658
27 Ga0065704_10070986 3300005289 Bacteria 13990
28 Ga0065715_10107777 3300005293 Bacteria 2748
29 Ga0070670_100013647 3300005331 Bacteria 6963
30 Ga0070670_100133253 3300005331 Bacteria 2146
31 Ga0070670_100134820 3300005331 Bacteria 2133
32 Ga0068869_100004548 3300005334 Bacteria 8636
33 Ga0070660_100013118 3300005339 Bacteria 5935
34 Ga0070661_100079815 3300005344 Bacteria 2415
35 Ga0070668_100025028 3300005347 Bacteria 4524
36 Ga0070669_100190481 3300005353 Bacteria 1609
37 Ga0070671_100045989 3300005355 Bacteria 3629
38 Ga0070671_100094697 3300005355 Bacteria 2503
39 Ga0070674_100125637 3300005356 Bacteria 1904
40 Ga0070667_100148710 3300005367 Bacteria 2056
41 Ga0070672_100000967 3300005543 Bacteria 17369
42 Ga0070693_100002525 3300005547 Bacteria 8435
43 Ga0070665_100133291 3300005548 Bacteria 2486
44 Ga0068852_100203096 3300005616 Bacteria 1876
45 Ga0068864_100029449 3300005618 Bacteria 4651
46 Ga0075364_10000771 3300006051 Bacteria 16831
47 Ga0075364_10007937 3300006051 Bacteria 6322
48 Ga0105251_10000396 3300009011 Bacteria 42564
49 Ga0105251_10013308 3300009011 Bacteria 4607
50 Ga0105245_10065260 3300009098 Bacteria 3292
51 Ga0105243_10050690 3300009148 Bacteria 3280
52 Ga0105242_10140243 3300009176 Bacteria 2097
53 Ga0105248_10017042 3300009177 Bacteria 8001
54 Ga0105239_10052687 3300010375 Bacteria 4462
55 Ga0157314_1001473 3300012500 Bacteria 1691
56 Ga0157327_1000483 3300012512 Bacteria 2143
57 Ga0157371_10023784 3300013102 Bacteria 4478
58 Ga0157370_10006479 3300013104 Bacteria 12910
59 Ga0157369_10031782 3300013105 Bacteria 5808
60 Ga0157369_10208213 3300013105 Bacteria 2050
61 Ga0157369_10302384 3300013105 Bacteria 1664
62 Ga0163162_10325349 3300013306 Bacteria 1670
63 Ga0157372_10144969 3300013307 Bacteria 2738
64 Ga0157375_10004646 3300013308 Bacteria 11935
65 Ga0157375_10011199 3300013308 Bacteria 7913
66 Ga0182008_10000116 3300014497 Bacteria 60097
67 Ga0182008_10006375 3300014497 Bacteria 6606
68 Ga0182008_10026781 3300014497 Bacteria 2923
69 Ga0182006_1008108 3300015261 Bacteria 4768
70 Ga0182006_1056625 3300015261 Bacteria 1493
71 Ga0182006_1059413 3300015261 Bacteria 1447
72 Ga0182005_1000839 3300015265 Bacteria 13754
73 Ga0163161_10012144 3300017792 Bacteria 5973
74 Ga0163161_10041318 3300017792 Bacteria 3314
75 Ga0163161_10179988 3300017792 Bacteria 1620
76 Ga0207425_1000011 3300025245 Bacteria 550735
77 Ga0207425_1025142 3300025245 Bacteria 1231
78 Ga0209129_1000273 3300025258 Bacteria 50169
79 Ga0209565_1000001 3300025263 Bacteria 2950419
80 Ga0209565_1000014 3300025263 Bacteria 530302
81 Ga0209565_1007193 3300025263 Bacteria 3028
82 Ga0209673_1000001 3300025273 Bacteria 3176258
83 Ga0209673_1000171 3300025273 Bacteria 133493
84 Ga0209675_1000001 3300025291 Bacteria 2950293
85 Ga0209675_1000021 3300025291 Bacteria 334833
86 Ga0209676_1000024 3300025292 Bacteria 578839
87 Ga0209676_1000047 3300025292 Bacteria 408645
88 Ga0209676_1000079 3300025292 Bacteria 290447
89 Ga0209676_1000652 3300025292 Bacteria 49719
90 Ga0209025_1000015 3300025294 Bacteria 808120
91 Ga0209025_1000054 3300025294 Bacteria 317002
92 Ga0209025_1000739 3300025294 Bacteria 55161
93 Ga0209025_1002929 3300025294 Bacteria 16990
94 Ga0209564_1000001 3300025295 Bacteria 3176258
95 Ga0209564_1000221 3300025295 Bacteria 129537
96 Ga0209758_1000062 3300025297 Bacteria 317002
97 Ga0209758_1012677 3300025297 Bacteria 4686
98 Ga0209758_1049723 3300025297 Bacteria 1477
99 Ga0209050_1000329 3300025298 Bacteria 94932
100 Ga0209050_1006609 3300025298 Bacteria 6808
101 Ga0209050_1014925 3300025298 Bacteria 3304
102 Ga0209256_1000002 3300025299 Bacteria 1906740
103 Ga0209256_1013632 3300025299 Bacteria 3002
104 Ga0209256_1015980 3300025299 Bacteria 2588
105 Ga0209051_1001951 3300025303 Bacteria 15859
106 Ga0209257_1000081 3300025304 Bacteria 306577
107 Ga0209257_1000217 3300025304 Bacteria 136049
108 Ga0209257_1000243 3300025304 Bacteria 126291
109 Ga0209257_1005149 3300025304 Bacteria 9435
110 Ga0209257_1016980 3300025304 Bacteria 2899
111 Ga0209257_1034727 3300025304 Bacteria 1569
112 Ga0209257_1051841 3300025304 Bacteria 1154
113 Ga0207713_1003704 3300025735 Bacteria 10275
114 Ga0207705_10050057 3300025909 Bacteria 3007
115 Ga0207657_10004737 3300025919 Bacteria 14363
116 Ga0207652_10111857 3300025921 Bacteria 2422
117 Ga0207650_10005141 3300025925 Bacteria 8932
118 Ga0207650_10255001 3300025925 Bacteria 1421
119 Ga0207687_10061104 3300025927 Bacteria 2660
120 Ga0207644_10028280 3300025931 Bacteria 3879
121 Ga0207644_10107979 3300025931 Bacteria 2100
122 Ga0207709_10002378 3300025935 Bacteria 11867
123 Ga0207709_10056409 3300025935 Bacteria 2431
124 Ga0207709_10118918 3300025935 Bacteria 1780
125 Ga0207669_10077056 3300025937 Bacteria 2119
126 Ga0207691_10002537 3300025940 Bacteria 17844
127 Ga0207691_10002689 3300025940 Bacteria 17383
128 Ga0207711_10099747 3300025941 Bacteria 2568
129 Ga0207689_10126714 3300025942 Bacteria 2100
130 Ga0207668_10098651 3300025972 Bacteria 2165
131 Ga0207658_10029319 3300025986 Bacteria 3885
132 Ga0207641_10073597 3300026088 Bacteria 2945
133 Ga0207698_10170848 3300026142 Bacteria 1914
134 Ga0209371_1000004 3300027312 Bacteria 1098197
135 Ga0209371_1000016 3300027312 Bacteria 646301
136 Ga0209984_1001668 3300027424 Bacteria 2423
137 Ga0209999_1001036 3300027543 Bacteria 4722
138 Ga0209983_1000355 3300027665 Bacteria 9676
139 Ga0209971_1004296 3300027682 Bacteria 3383
140 Ga0209974_10008319 3300027876 Bacteria 3549
141 Ga0209974_10018627 3300027876 Bacteria 2303
142 Ga0268266_10000001 3300028379 Bacteria 4040580
143 Ga0268266_10015923 3300028379 Bacteria 6435
144 Ga0268266_10479064 3300028379 Bacteria 1186
145 Ga0268256_1000005 3300030500 Bacteria 1082342
146 Ga0268256_1000015 3300030500 Bacteria 646300
147 Ga0314311_1026500 3300030733 Bacteria 3213
148 Ga0314311_1122229 3300030733 Bacteria 1767
149 Ga0316178_1078410 3300030735 Bacteria 2589
150 Ga0307513_10042643 3300031456 Bacteria 4993
151 Ga0307413_10003525 3300031824 Bacteria 6607
152 Ga0307413_10234052 3300031824 Bacteria 1351
153 Ga0307410_10034108 3300031852 Bacteria 3292
154 Ga0307410_10153471 3300031852 Bacteria 1717
155 Ga0307406_10019163 3300031901 Bacteria 4013
156 Ga0307406_10038628 3300031901 Bacteria 2956
157 Ga0307412_10017040 3300031911 Bacteria 4341
158 Ga0307412_10146275 3300031911 Bacteria 1737
159 Ga0307412_10155001 3300031911 Bacteria 1695
160 Ga0307412_10228043 3300031911 Bacteria 1432
161 Ga0307416_100008265 3300032002 Bacteria 6697
162 Ga0307416_100032807 3300032002 Bacteria 3930
163 Ga0307414_10006449 3300032004 Bacteria 6544
164 Ga0307414_10018021 3300032004 Bacteria 4334
165 Ga0307414_10057024 3300032004 Bacteria 2743
166 Ga0307414_10133443 3300032004 Bacteria 1931
167 Ga0307414_10270605 3300032004 Bacteria 1422
168 Ga0373952_0050481 3300035092 Bacteria 990
169 Ga0395899_0118728 3300037312 Bacteria 1896
170 Ga0395900_0009774 3300037418 Bacteria 9830
171 Ga0395898_0212707 3300037466 Bacteria 1844
172 Ga0395905_0002215 3300037471 Bacteria 21940
173 Ga0395905_0216012 3300037471 Bacteria 1796
174 Ga0395905_0298475 3300037471 Bacteria 1498
175 Ga0395901_0008384 3300038443 Bacteria 10448
176 Ga0237819_05936 3300038705 Bacteria 1876
177 Ga0439436_0003610 3300041404 Bacteria 4709
178 Ga0439436_0004895 3300041404 Bacteria 4111
179 Ga0439436_0008629 3300041404 Bacteria 3132
180 Ga0439436_0017342 3300041404 Bacteria 2155
181 Ga0439439_0000221 3300041406 Bacteria 8801
182 Ga0439447_000570 3300041407 Bacteria 13763
183 Ga0439461_0002118 3300041410 Bacteria 3139
184 Ga0439465_0008057 3300041413 Bacteria 3334
185 Ga0439465_0015638 3300041413 Bacteria 2366
186 Ga0451797_0718854 3300041453 Bacteria 1593
187 Ga0451800_1041551 3300041459 Bacteria 1305
188 Ga0451802_2055396 3300041460 Bacteria 4211
189 Ga0451806_096927 3300041462 Bacteria 3943
190 Ga0451807_1588003 3300041486 Bacteria 2707
191 Ga0451843_0107487 3300041509 Bacteria 1303
192 Ga0439433_0016261 3300041999 Bacteria 1647
193 Ga0439433_0032128 3300041999 Bacteria 1203
194 Ga0439445_0007851 3300042004 Bacteria 2486
195 Ga0439432_011632 3300042006 Bacteria 3030
196 Ga0439432_016470 3300042006 Bacteria 2487
197 Ga0439432_018095 3300042006 Bacteria 2358
198 Ga0439449_0000018 3300042007 Bacteria 46636
199 Ga0439449_0001309 3300042007 Bacteria 9751
200 Ga0439449_0005200 3300042007 Bacteria 4994
201 Ga0439449_0026057 3300042007 Bacteria 2183
202 Ga0439457_026597 3300042014 Bacteria 1281
203 Ga0439462_0041904 3300042015 Bacteria 1223
204 Ga0439462_0047921 3300042015 Bacteria 1146
205 Ga0450911_002778 3300042115 Bacteria 3306
206 Ga0439435_0019524 3300042436 Bacteria 1739
207 Ga0451577_0068201 3300042876 Bacteria 3172
208 Ga0466972_0013438 3300044658 Bacteria 4111
209 Ga0453684_0000136 3300044712 Bacteria 323402
210 Ga0466970_0000860 3300044765 Bacteria 14639
211 Ga0466959_0022450 3300045049 Bacteria 4666
212 Ga0451576_0000025 3300045051 Bacteria 427980
213 Ga0495627_009404 3300046453 Bacteria 3599
214 Ga0495627_016007 3300046453 Bacteria 2577
215 Ga0495627_023040 3300046453 Bacteria 2044
216 Ga0495627_034808 3300046453 Bacteria 1572
217 Ga0495638_0000734 3300046460 Bacteria 35240
218 Ga0495638_0086832 3300046460 Bacteria 1890
219 Ga0495605_0054514 3300046474 Bacteria 1936
220 Ga0495606_0002302 3300046507 Bacteria 22524
221 Ga0495610_0026128 3300046512 Bacteria 3121
222 Ga0495631_0042532 3300046518 Bacteria 2007
223 Ga0495643_0000515 3300046522 Bacteria 48146
224 Ga0495643_0068634 3300046522 Bacteria 1865
225 Ga0495663_0001398 3300046525 Bacteria 7616
226 Ga0495663_0005290 3300046525 Bacteria 3587
227 Ga0495663_0005686 3300046525 Bacteria 3452
228 Ga0495663_0016367 3300046525 Bacteria 2096
229 Ga0495663_0028874 3300046525 Bacteria 1635
230 Ga0495621_0000778 3300046539 Bacteria 8079
231 Ga0495621_0052098 3300046539 Bacteria 1466
232 Ga0495633_0029369 3300046558 Bacteria 2675
233 Ga0495656_0061940 3300046615 Bacteria 1635
234 Ga0495668_0011305 3300046616 Bacteria 5354
235 Ga0495669_0095195 3300046684 Bacteria 1379
236 Ga0495671_0003782 3300046692 Bacteria 9199
237 Ga0495660_0027985 3300046810 Bacteria 3187
238 Ga0495636_0003867 3300047318 Bacteria 5842
239 Ga0495636_0024785 3300047318 Bacteria 2434
240 Ga0495672_0000301 3300047320 Bacteria 66897
241 Ga0495672_0088500 3300047320 Bacteria 1706
242 Ga0495686_0069527 3300047472 Bacteria 2170
243 Ga0496101_0040853 3300048904 Bacteria 3304
244 Ga0496104_0136676 3300048907 Bacteria 2355
245 Ga0496108_0055114 3300048911 Bacteria 3337
246 Ga0496109_0061185 3300048912 Bacteria 3442
247 Ga0496112_0149441 3300048915 Bacteria 2303
248 Ga0496113_0014825 3300048916 Bacteria 5333
249 Ga0496114_0003855 3300048917 Bacteria 11564
250 Ga0496116_0014237 3300048919 Bacteria 6363
251 Ga0496116_0028927 3300048919 Bacteria 4004
252 Ga0496116_0231208 3300048919 Bacteria 937
253 Ga0496117_0000334 3300048920 Bacteria 83273
254 Ga0496117_0000798 3300048920 Bacteria 49089
255 Ga0496117_0001109 3300048920 Bacteria 40625
256 Ga0496117_0017273 3300048920 Bacteria 6034
257 Ga0496117_0048103 3300048920 Bacteria 3050
258 Ga0496117_0075403 3300048920 Bacteria 2241
259 Ga0496118_0002455 3300048921 Bacteria 24959
260 Ga0496118_0006655 3300048921 Bacteria 12612
261 Ga0496118_0006724 3300048921 Bacteria 12529
262 Ga0496118_0057707 3300048921 Bacteria 2907
263 Ga0496118_0058849 3300048921 Bacteria 2867
264 Ga0496119_0000606 3300048922 Bacteria 48440
265 Ga0496119_0000971 3300048922 Bacteria 36815
266 Ga0496119_0013759 3300048922 Bacteria 6408
267 Ga0496120_0000570 3300048923 Bacteria 56326
268 Ga0496120_0001224 3300048923 Bacteria 32476
269 Ga0496121_0020386 3300048924 Bacteria 6568
270 Ga0496121_0028009 3300048924 Bacteria 5257
271 Ga0496121_0055617 3300048924 Bacteria 3294
272 Ga0496121_0307750 3300048924 Bacteria 1073
273 Ga0496121_0355891 3300048924 Bacteria 973
274 Ga0496122_0000977 3300048925 Bacteria 51324
275 Ga0496122_0002172 3300048925 Bacteria 28744
276 Ga0496122_0008000 3300048925 Bacteria 11552
277 Ga0496122_0099475 3300048925 Bacteria 1949
278 Ga0496122_0118054 3300048925 Bacteria 1720
279 Ga0496122_0126750 3300048925 Bacteria 1632
280 Ga0496123_0000706 3300048926 Bacteria 54610
281 Ga0496123_0000789 3300048926 Bacteria 51201
282 Ga0496123_0009956 3300048926 Bacteria 8476
283 Ga0496123_0038610 3300048926 Bacteria 3353
284 Ga0496123_0069050 3300048926 Bacteria 2221
285 Ga0496124_0000009 3300048927 Bacteria 734820
286 Ga0496124_0001105 3300048927 Bacteria 42427
287 Ga0496124_0015860 3300048927 Bacteria 7196
288 Ga0496124_0015927 3300048927 Bacteria 7178
289 Ga0496124_0030811 3300048927 Bacteria 4753
290 Ga0496124_0044260 3300048927 Bacteria 3820
291 Ga0496124_0082561 3300048927 Bacteria 2638
292 Ga0496124_0103388 3300048927 Bacteria 2304
293 Ga0496125_0012969 3300048928 Bacteria 8228
294 Ga0496125_0019044 3300048928 Bacteria 6494
295 Ga0496125_0038453 3300048928 Bacteria 4141
296 Ga0496125_0126039 3300048928 Bacteria 1814
297 Ga0496126_0000595 3300048929 Bacteria 68485
298 Ga0496126_0002981 3300048929 Bacteria 21979
299 Ga0496126_0063298 3300048929 Bacteria 3316
300 Ga0496126_0071328 3300048929 Bacteria 3092
301 Ga0496126_0173871 3300048929 Bacteria 1833
302 Ga0501031_0083795 3300049568 Bacteria 2078
303 Ga0501033_0034087 3300049570 Bacteria 3820
304 Ga0501034_0000122 3300049571 Bacteria 144085
305 Ga0501034_0018100 3300049571 Bacteria 7230
306 Ga0501043_0133501 3300049579 Bacteria 1945
307 Ga0501239_000482 3300049672 Bacteria 3105
308 Ga0501242_004256 3300049674 Bacteria 1584
309 Ga0501268_009965 3300049765 Bacteria 1470
310 nmdc:mga00v17_6749_c1 3300050491 Bacteria 6099
311 nmdc:mga07m45_49359_c1 3300050496 Bacteria 2368
312 Ga0500634_0000047 3300053161 Bacteria 55541

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2524614729 2525555829 292
2 iso_pu_bacteria 2627854209 2630650843 292
3 3300046474 Ga0495605_0054514 Ga0495605_0054514_86_967 293
4 3300046507 Ga0495606_0002302 Ga0495606_0002302_14737_15618 293
5 iso_pu_bacteria 2547132130 2547502665 293
6 iso_pu_bacteria 2747842428 2747948895 293
7 iso_pu_bacteria 2765235840 2765578598 293
8 iso_pu_bacteria 2816332141 2816516675 293
9 iso_pu_bacteria 2842391507 2842394908 293
10 iso_pu_bacteria 2842757796 2842758486 293
11 iso_pu_bacteria 2857442823 2857445303 293
12 iso_pu_bacteria 2874220319 2874221226 293
13 iso_pu_bacteria 2919089067 2919092611 293
14 iso_pu_bacteria 2919134579 2919136216 293
15 iso_pu_bacteria 2928496128 2928496195 293
16 iso_pu_bacteria 2931380184 2931381129 293
17 iso_pu_bacteria 2937610967 2937612047 293
18 iso_pu_bacteria 2939589442 2939590679 293
19 iso_pu_bacteria 2939622612 2939622862 293
20 iso_pu_bacteria 2939626828 2939630048 293
21 iso_pu_bacteria 2961047084 2961047992 293
22 iso_pu_bacteria 2961064222 2961065013 293
23 iso_pu_bacteria 2974307012 2974309273 293
24 iso_pu_bacteria 2977247770 2977249994 293
25 iso_pu_bacteria 2984514374 2984515517 293
26 iso_pu_bacteria 2987605356 2987605997 293
27 3300025986 Ga0207658_10029319 Ga0207658_100293194 294
28 3300028379 Ga0268266_10000001 Ga0268266_100000011712 294
29 3300044658 Ga0466972_0013438 Ga0466972_0013438_2497_3399 294
30 3300044765 Ga0466970_0000860 Ga0466970_0000860_11343_12245 294
31 3300009098 Ga0105245_10065260 Ga0105245_100652604 295
32 3300009177 Ga0105248_10017042 Ga0105248_100170425 295
33 3300010375 Ga0105239_10052687 Ga0105239_100526874 295
34 3300025927 Ga0207687_10061104 Ga0207687_100611041 295
35 3300046522 Ga0495643_0068634 Ga0495643_0068634_319_1206 295
36 iso_pu_bacteria 2571042365 2572253505 295
37 iso_pu_bacteria 2643221695 2644528847 295
38 iso_pu_bacteria 2852649853 2852651153 295
39 iso_pu_bacteria 2941475908 2941477902 295
40 3300005547 Ga0070693_100002525 Ga0070693_1000025253 296
41 3300013105 Ga0157369_10208213 Ga0157369_102082132 296
42 3300013308 Ga0157375_10004646 Ga0157375_1000464611 296
43 3300031911 Ga0307412_10155001 Ga0307412_101550011 296
44 3300032002 Ga0307416_100008265 Ga0307416_1000082656 296
45 3300032002 Ga0307416_100032807 Ga0307416_1000328074 296
46 3300003320 rootH2_10007917 rootH2_100079174 297
47 3300003323 rootH1_10093437 rootH1_100934372 297
48 3300003771 Ga0055526_1011093 Ga0055526_10110934 297
49 3300003773 Ga0055537_1000785 Ga0055537_100078519 297
50 3300003775 Ga0055524_1032948 Ga0055524_10329482 297
51 3300003781 Ga0055536_1003442 Ga0055536_10034426 297
52 3300003781 Ga0055536_1027739 Ga0055536_10277391 297
53 3300003784 Ga0055534_1000559 Ga0055534_10005592 297
54 3300003790 Ga0055528_1004542 Ga0055528_10045427 297
55 3300003794 Ga0055531_10035526 Ga0055531_100355261 297
56 3300003856 Ga0058692_1000002 Ga0058692_1000002129 297
57 3300005289 Ga0065704_10015257 Ga0065704_100152572 297
58 3300005347 Ga0070668_100025028 Ga0070668_1000250285 297
59 3300005548 Ga0070665_100133291 Ga0070665_1001332913 297
60 3300006051 Ga0075364_10007937 Ga0075364_100079372 297
61 3300009011 Ga0105251_10013308 Ga0105251_100133081 297
62 3300013104 Ga0157370_10006479 Ga0157370_100064793 297
63 3300013105 Ga0157369_10302384 Ga0157369_103023842 297
64 3300013306 Ga0163162_10325349 Ga0163162_103253492 297
65 3300014497 Ga0182008_10000116 Ga0182008_1000011625 297
66 3300014497 Ga0182008_10006375 Ga0182008_100063753 297
67 3300015261 Ga0182006_1008108 Ga0182006_10081084 297
68 3300015261 Ga0182006_1056625 Ga0182006_10566251 297
69 3300015261 Ga0182006_1059413 Ga0182006_10594132 297
70 3300017792 Ga0163161_10041318 Ga0163161_100413183 297
71 3300025263 Ga0209565_1000014 Ga0209565_1000014181 297
72 3300025273 Ga0209673_1000171 Ga0209673_100017144 297
73 3300025291 Ga0209675_1000021 Ga0209675_1000021307 297
74 3300025292 Ga0209676_1000047 Ga0209676_100004796 297
75 3300025292 Ga0209676_1000079 Ga0209676_1000079174 297
76 3300025295 Ga0209564_1000221 Ga0209564_100022110 297
77 3300025298 Ga0209050_1000329 Ga0209050_10003298 297
78 3300025298 Ga0209050_1006609 Ga0209050_10066096 297
79 3300025299 Ga0209256_1013632 Ga0209256_10136323 297
80 3300025299 Ga0209256_1015980 Ga0209256_10159804 297
81 3300025303 Ga0209051_1001951 Ga0209051_100195111 297
82 3300025304 Ga0209257_1000081 Ga0209257_1000081184 297
83 3300025304 Ga0209257_1005149 Ga0209257_100514910 297
84 3300025304 Ga0209257_1034727 Ga0209257_10347272 297
85 3300025935 Ga0207709_10002378 Ga0207709_1000237812 297
86 3300028379 Ga0268266_10015923 Ga0268266_100159234 297
87 3300031911 Ga0307412_10017040 Ga0307412_100170405 297
88 3300032004 Ga0307414_10018021 Ga0307414_100180215 297
89 3300038705 Ga0237819_05936 Ga0237819_05936_220_1113 297
90 3300042115 Ga0450911_002778 Ga0450911_002778_148_1041 297
91 3300046453 Ga0495627_009404 Ga0495627_009404_1522_2415 297
92 3300046453 Ga0495627_016007 Ga0495627_016007_47_940 297
93 3300046453 Ga0495627_023040 Ga0495627_023040_235_1128 297
94 3300046460 Ga0495638_0000734 Ga0495638_0000734_9379_10272 297
95 3300046460 Ga0495638_0086832 Ga0495638_0086832_240_1133 297
96 3300046512 Ga0495610_0026128 Ga0495610_0026128_760_1653 297
97 3300046518 Ga0495631_0042532 Ga0495631_0042532_721_1614 297
98 3300046522 Ga0495643_0000515 Ga0495643_0000515_22953_23846 297
99 3300046525 Ga0495663_0001398 Ga0495663_0001398_902_1795 297
100 3300046525 Ga0495663_0005290 Ga0495663_0005290_1754_2647 297
101 3300046525 Ga0495663_0005686 Ga0495663_0005686_344_1237 297
102 3300046558 Ga0495633_0029369 Ga0495633_0029369_1490_2383 297
103 3300046810 Ga0495660_0027985 Ga0495660_0027985_814_1707 297
104 3300047320 Ga0495672_0000301 Ga0495672_0000301_32509_33402 297
105 3300047320 Ga0495672_0088500 Ga0495672_0088500_140_1033 297
106 3300047472 Ga0495686_0069527 Ga0495686_0069527_426_1319 297
107 3300048919 Ga0496116_0014237 Ga0496116_0014237_3410_4303 297
108 3300048920 Ga0496117_0000334 Ga0496117_0000334_70044_70937 297
109 3300048920 Ga0496117_0001109 Ga0496117_0001109_24589_25482 297
110 3300048920 Ga0496117_0017273 Ga0496117_0017273_3915_4808 297
111 3300048920 Ga0496117_0048103 Ga0496117_0048103_1362_2255 297
112 3300048921 Ga0496118_0002455 Ga0496118_0002455_8909_9802 297
113 3300048921 Ga0496118_0006724 Ga0496118_0006724_10100_10993 297
114 3300048921 Ga0496118_0058849 Ga0496118_0058849_488_1381 297
115 3300048922 Ga0496119_0013759 Ga0496119_0013759_248_1141 297
116 3300048924 Ga0496121_0020386 Ga0496121_0020386_4169_5062 297
117 3300048924 Ga0496121_0307750 Ga0496121_0307750_18_911 297
118 3300048924 Ga0496121_0355891 Ga0496121_0355891_11_904 297
119 3300048925 Ga0496122_0000977 Ga0496122_0000977_18096_18989 297
120 3300048925 Ga0496122_0118054 Ga0496122_0118054_162_1055 297
121 3300048925 Ga0496122_0126750 Ga0496122_0126750_724_1617 297
122 3300048926 Ga0496123_0000789 Ga0496123_0000789_18083_18976 297
123 3300048926 Ga0496123_0038610 Ga0496123_0038610_1102_1995 297
124 3300048926 Ga0496123_0069050 Ga0496123_0069050_1070_1963 297
125 3300048927 Ga0496124_0015860 Ga0496124_0015860_1215_2108 297
126 3300048927 Ga0496124_0015927 Ga0496124_0015927_3940_4833 297
127 3300048927 Ga0496124_0030811 Ga0496124_0030811_1368_2261 297
128 3300048927 Ga0496124_0044260 Ga0496124_0044260_1970_2863 297
129 3300048927 Ga0496124_0103388 Ga0496124_0103388_990_1883 297
130 3300048928 Ga0496125_0019044 Ga0496125_0019044_4031_4924 297
131 3300048928 Ga0496125_0038453 Ga0496125_0038453_2162_3055 297
132 3300048929 Ga0496126_0071328 Ga0496126_0071328_624_1517 297
133 3300048929 Ga0496126_0173871 Ga0496126_0173871_254_1147 297
134 3300049571 Ga0501034_0018100 Ga0501034_0018100_229_1122 297
135 3300050496 nmdc:mga07m45_49359_c1 nmdc:mga07m45_49359_c1_875_1768 297
136 iso_pu_bacteria 2643221573 2643879375 297
137 iso_pu_bacteria 2643221593 2643974281 297
138 iso_pu_bacteria 2643221720 2644660673 297
139 iso_pu_bacteria 2643221728 2644698033 297
140 iso_pu_bacteria 2894414249 2894415004 297
141 iso_pu_bacteria 2941489479 2941489489 297
142 iso_pu_bacteria 2995948881 2995950984 297
143 iso_pu_bacteria 8003014200 8003014633 297
144 3300015265 Ga0182005_1000839 Ga0182005_100083914 298
145 3300048907 Ga0496104_0136676 Ga0496104_0136676_384_1283 298
146 3300048919 Ga0496116_0028927 Ga0496116_0028927_2249_3148 298
147 3300048919 Ga0496116_0231208 Ga0496116_0231208_24_923 298
148 3300048922 Ga0496119_0000606 Ga0496119_0000606_19500_20399 298
149 3300048923 Ga0496120_0001224 Ga0496120_0001224_28668_29567 298
150 3300048924 Ga0496121_0028009 Ga0496121_0028009_4346_5245 298
151 3300048925 Ga0496122_0008000 Ga0496122_0008000_1564_2463 298
152 3300048926 Ga0496123_0009956 Ga0496123_0009956_1092_1991 298
153 3300048927 Ga0496124_0082561 Ga0496124_0082561_1587_2486 298
154 3300048928 Ga0496125_0012969 Ga0496125_0012969_7176_8075 298
155 3300048928 Ga0496125_0126039 Ga0496125_0126039_902_1801 298
156 3300048929 Ga0496126_0000595 Ga0496126_0000595_46214_47113 298
157 iso_pu_bacteria 2643221581 2643916117 298
158 iso_pu_bacteria 2818991457 2819659747 298
159 iso_pu_bacteria 2842780639 2842781160 298
160 iso_pu_bacteria 2852684882 2852685438 298
161 iso_pu_bacteria 2919130084 2919131595 298
162 iso_pu_bacteria 2923516293 2923517904 298
163 iso_pu_bacteria 2929195423 2929198032 298
164 iso_pu_bacteria 8021622325 8021624379 298
165 iso_pu_bacteria 8021626552 8021628126 298
166 iso_pu_bacteria 8021648035 8021649871 298
167 3300031911 Ga0307412_10146275 Ga0307412_101462752 299
168 3300031911 Ga0307412_10228043 Ga0307412_102280432 299
169 3300032004 Ga0307414_10057024 Ga0307414_100570242 299
170 3300041404 Ga0439436_0003610 Ga0439436_0003610_286_1185 299
171 3300041404 Ga0439436_0017342 Ga0439436_0017342_331_1230 299
172 3300042006 Ga0439432_011632 Ga0439432_011632_1655_2554 299
173 3300042006 Ga0439432_018095 Ga0439432_018095_120_1019 299
174 3300042007 Ga0439449_0001309 Ga0439449_0001309_3194_4093 299
175 3300042015 Ga0439462_0041904 Ga0439462_0041904_297_1196 299
176 3300042015 Ga0439462_0047921 Ga0439462_0047921_126_1025 299
177 3300049672 Ga0501239_000482 Ga0501239_000482_1766_2665 299
178 3300005355 Ga0070671_100094697 Ga0070671_1000946972 300
179 3300025931 Ga0207644_10028280 Ga0207644_100282803 300
180 3300031824 Ga0307413_10003525 Ga0307413_100035254 300
181 3300032004 Ga0307414_10006449 Ga0307414_100064493 300
182 3300037312 Ga0395899_0118728 Ga0395899_0118728_518_1420 300
183 3300037418 Ga0395900_0009774 Ga0395900_0009774_3130_4032 300
184 3300037466 Ga0395898_0212707 Ga0395898_0212707_108_1010 300
185 3300037471 Ga0395905_0002215 Ga0395905_0002215_12368_13270 300
186 3300037471 Ga0395905_0216012 Ga0395905_0216012_465_1367 300
187 3300038443 Ga0395901_0008384 Ga0395901_0008384_9345_10247 300
188 3300048912 Ga0496109_0061185 Ga0496109_0061185_1217_2119 300
189 3300048915 Ga0496112_0149441 Ga0496112_0149441_980_1882 300
190 3300048916 Ga0496113_0014825 Ga0496113_0014825_2278_3180 300
191 3300049568 Ga0501031_0083795 Ga0501031_0083795_526_1428 300
192 3300049570 Ga0501033_0034087 Ga0501033_0034087_502_1404 300
193 3300003187 JGI25151J46595_10000680 JGI25151J46595_1000068010 301
194 3300003771 Ga0055526_1000426 Ga0055526_100042617 301
195 3300003773 Ga0055537_1000452 Ga0055537_100045212 301
196 3300003775 Ga0055524_1000453 Ga0055524_100045317 301
197 3300003781 Ga0055536_1032048 Ga0055536_10320482 301
198 3300003784 Ga0055534_1000291 Ga0055534_100029117 301
199 3300003790 Ga0055528_1000425 Ga0055528_100042517 301
200 3300003794 Ga0055531_10033856 Ga0055531_100338562 301
201 3300003794 Ga0055531_10045486 Ga0055531_100454861 301
202 3300005293 Ga0065715_10107777 Ga0065715_101077774 301
203 3300005331 Ga0070670_100134820 Ga0070670_1001348202 301
204 3300005339 Ga0070660_100013118 Ga0070660_1000131186 301
205 3300005344 Ga0070661_100079815 Ga0070661_1000798153 301
206 3300005355 Ga0070671_100045989 Ga0070671_1000459892 301
207 3300005616 Ga0068852_100203096 Ga0068852_1002030962 301
208 3300005618 Ga0068864_100029449 Ga0068864_1000294495 301
209 3300012500 Ga0157314_1001473 Ga0157314_10014731 301
210 3300012512 Ga0157327_1000483 Ga0157327_10004833 301
211 3300013102 Ga0157371_10023784 Ga0157371_100237844 301
212 3300013105 Ga0157369_10031782 Ga0157369_100317827 301
213 3300013307 Ga0157372_10144969 Ga0157372_101449693 301
214 3300014497 Ga0182008_10026781 Ga0182008_100267811 301
215 3300025245 Ga0207425_1025142 Ga0207425_10251421 301
216 3300025263 Ga0209565_1000001 Ga0209565_10000011682 301
217 3300025273 Ga0209673_1000001 Ga0209673_10000011682 301
218 3300025291 Ga0209675_1000001 Ga0209675_1000001851 301
219 3300025292 Ga0209676_1000652 Ga0209676_10006525 301
220 3300025294 Ga0209025_1000015 Ga0209025_1000015300 301
221 3300025294 Ga0209025_1000739 Ga0209025_100073936 301
222 3300025294 Ga0209025_1002929 Ga0209025_100292917 301
223 3300025295 Ga0209564_1000001 Ga0209564_10000011013 301
224 3300025297 Ga0209758_1012677 Ga0209758_10126776 301
225 3300025297 Ga0209758_1049723 Ga0209758_10497232 301
226 3300025298 Ga0209050_1014925 Ga0209050_10149253 301
227 3300025299 Ga0209256_1000002 Ga0209256_1000002540 301
228 3300025304 Ga0209257_1000243 Ga0209257_100024362 301
229 3300025304 Ga0209257_1016980 Ga0209257_10169802 301
230 3300025909 Ga0207705_10050057 Ga0207705_100500572 301
231 3300025919 Ga0207657_10004737 Ga0207657_100047375 301
232 3300025921 Ga0207652_10111857 Ga0207652_101118572 301
233 3300025925 Ga0207650_10255001 Ga0207650_102550012 301
234 3300025931 Ga0207644_10107979 Ga0207644_101079792 301
235 3300025941 Ga0207711_10099747 Ga0207711_100997472 301
236 3300026088 Ga0207641_10073597 Ga0207641_100735972 301
237 3300026142 Ga0207698_10170848 Ga0207698_101708483 301
238 3300027424 Ga0209984_1001668 Ga0209984_10016683 301
239 3300027543 Ga0209999_1001036 Ga0209999_10010363 301
240 3300027665 Ga0209983_1000355 Ga0209983_10003555 301
241 3300027682 Ga0209971_1004296 Ga0209971_10042962 301
242 3300027876 Ga0209974_10008319 Ga0209974_100083194 301
243 3300027876 Ga0209974_10018627 Ga0209974_100186272 301
244 3300030733 Ga0314311_1122229 Ga0314311_11222292 301
245 3300031852 Ga0307410_10034108 Ga0307410_100341084 301
246 3300031852 Ga0307410_10153471 Ga0307410_101534712 301
247 3300031901 Ga0307406_10019163 Ga0307406_100191636 301
248 3300031901 Ga0307406_10038628 Ga0307406_100386283 301
249 3300035092 Ga0373952_0050481 Ga0373952_0050481_69_974 301
250 3300037471 Ga0395905_0298475 Ga0395905_0298475_70_981 301
251 3300041404 Ga0439436_0004895 Ga0439436_0004895_1644_2549 301
252 3300041404 Ga0439436_0008629 Ga0439436_0008629_1632_2537 301
253 3300041406 Ga0439439_0000221 Ga0439439_0000221_373_1278 301
254 3300041407 Ga0439447_000570 Ga0439447_000570_10346_11251 301
255 3300041413 Ga0439465_0008057 Ga0439465_0008057_952_1857 301
256 3300041509 Ga0451843_0107487 Ga0451843_0107487_376_1281 301
257 3300041999 Ga0439433_0032128 Ga0439433_0032128_143_1048 301
258 3300042004 Ga0439445_0007851 Ga0439445_0007851_410_1315 301
259 3300042007 Ga0439449_0000018 Ga0439449_0000018_42613_43518 301
260 3300042876 Ga0451577_0068201 Ga0451577_0068201_763_1683 301
261 3300046525 Ga0495663_0016367 Ga0495663_0016367_600_1505 301
262 3300046525 Ga0495663_0028874 Ga0495663_0028874_530_1435 301
263 3300046539 Ga0495621_0000778 Ga0495621_0000778_1082_1987 301
264 3300046539 Ga0495621_0052098 Ga0495621_0052098_532_1437 301
265 3300046615 Ga0495656_0061940 Ga0495656_0061940_405_1310 301
266 3300046616 Ga0495668_0011305 Ga0495668_0011305_337_1242 301
267 3300047318 Ga0495636_0003867 Ga0495636_0003867_1095_2015 301
268 3300048904 Ga0496101_0040853 Ga0496101_0040853_2092_2997 301
269 3300048911 Ga0496108_0055114 Ga0496108_0055114_1813_2718 301
270 3300048924 Ga0496121_0055617 Ga0496121_0055617_712_1617 301
271 3300049579 Ga0501043_0133501 Ga0501043_0133501_190_1095 301
272 3300049674 Ga0501242_004256 Ga0501242_004256_18_923 301
273 3300049765 Ga0501268_009965 Ga0501268_009965_337_1242 301
274 3300003781 Ga0055536_1001684 Ga0055536_10016848 302
275 3300003856 Ga0058692_1000006 Ga0058692_100000617 302
276 3300005289 Ga0065704_10070986 Ga0065704_1007098618 302
277 3300006051 Ga0075364_10000771 Ga0075364_100007715 302
278 3300009011 Ga0105251_10000396 Ga0105251_1000039619 302
279 3300009148 Ga0105243_10050690 Ga0105243_100506903 302
280 3300025292 Ga0209676_1000024 Ga0209676_1000024338 302
281 3300025304 Ga0209257_1000217 Ga0209257_100021784 302
282 3300025735 Ga0207713_1003704 Ga0207713_100370411 302
283 3300027312 Ga0209371_1000016 Ga0209371_100001617 302
284 3300030500 Ga0268256_1000015 Ga0268256_1000015553 302
285 3300031456 Ga0307513_10042643 Ga0307513_100426436 302
286 3300041410 Ga0439461_0002118 Ga0439461_0002118_338_1246 302
287 3300041413 Ga0439465_0015638 Ga0439465_0015638_1380_2288 302
288 3300041459 Ga0451800_1041551 Ga0451800_1041551_174_1082 302
289 3300041460 Ga0451802_2055396 Ga0451802_2055396_1468_2376 302
290 3300041462 Ga0451806_096927 Ga0451806_096927_2802_3710 302
291 3300041486 Ga0451807_1588003 Ga0451807_1588003_1192_2100 302
292 3300041999 Ga0439433_0016261 Ga0439433_0016261_365_1273 302
293 3300042007 Ga0439449_0005200 Ga0439449_0005200_1320_2228 302
294 3300042007 Ga0439449_0026057 Ga0439449_0026057_916_1824 302
295 3300042014 Ga0439457_026597 Ga0439457_026597_250_1158 302
296 3300042436 Ga0439435_0019524 Ga0439435_0019524_428_1336 302
297 3300044712 Ga0453684_0000136 Ga0453684_0000136_83098_84027 302
298 3300045051 Ga0451576_0000025 Ga0451576_0000025_343864_344793 302
299 3300046453 Ga0495627_034808 Ga0495627_034808_148_1056 302
300 3300046692 Ga0495671_0003782 Ga0495671_0003782_418_1326 302
301 3300048917 Ga0496114_0003855 Ga0496114_0003855_8824_9732 302
302 3300048920 Ga0496117_0000798 Ga0496117_0000798_35206_36114 302
303 3300048922 Ga0496119_0000971 Ga0496119_0000971_35190_36098 302
304 3300048923 Ga0496120_0000570 Ga0496120_0000570_35206_36114 302
305 3300048925 Ga0496122_0002172 Ga0496122_0002172_762_1670 302
306 3300048925 Ga0496122_0099475 Ga0496122_0099475_521_1429 302
307 3300048926 Ga0496123_0000706 Ga0496123_0000706_27075_27983 302
308 3300048927 Ga0496124_0000009 Ga0496124_0000009_105289_106197 302
309 3300048927 Ga0496124_0001105 Ga0496124_0001105_20268_21176 302
310 3300048929 Ga0496126_0002981 Ga0496126_0002981_9115_10023 302
311 3300049571 Ga0501034_0000122 Ga0501034_0000122_84708_85616 302
312 3300050491 nmdc:mga00v17_6749_c1 nmdc:mga00v17_6749_c1_3883_4791 302
313 3300053161 Ga0500634_0000047 Ga0500634_0000047_12550_13458 302
314 3300045049 Ga0466959_0022450 Ga0466959_0022450_2317_3282 305
315 3300048920 Ga0496117_0075403 Ga0496117_0075403_991_1956 305
316 3300048921 Ga0496118_0006655 Ga0496118_0006655_2113_3078 305
317 3300042006 Ga0439432_016470 Ga0439432_016470_249_1199 306
318 3300046684 Ga0495669_0095195 Ga0495669_0095195_188_1126 306
319 3300030733 Ga0314311_1026500 Ga0314311_10265004 307
320 3300030735 Ga0316178_1078410 Ga0316178_10784103 307
321 3300032004 Ga0307414_10270605 Ga0307414_102706052 307
322 3300017792 Ga0163161_10179988 Ga0163161_101799882 309
323 iso_pu_bacteria 2576861471 2578458798 309
324 iso_pu_bacteria 2643221559 2643815328 311
325 iso_pu_bacteria 2643221586 2643940005 311
326 iso_pu_bacteria 2643221612 2644077061 311
327 iso_pu_bacteria 2643221727 2644695375 311
328 3300005543 Ga0070672_100000967 Ga0070672_1000009679 312
329 3300025940 Ga0207691_10002689 Ga0207691_100026898 312
330 3300025972 Ga0207668_10098651 Ga0207668_100986513 312
331 3300028379 Ga0268266_10479064 Ga0268266_104790641 312
332 3300025263 Ga0209565_1007193 Ga0209565_10071931 313
333 3300027312 Ga0209371_1000004 Ga0209371_1000004338 313
334 3300030500 Ga0268256_1000005 Ga0268256_1000005707 313
335 3300031824 Ga0307413_10234052 Ga0307413_102340521 313
336 3300005331 Ga0070670_100013647 Ga0070670_1000136472 314
337 3300017792 Ga0163161_10012144 Ga0163161_100121444 314
338 3300025925 Ga0207650_10005141 Ga0207650_100051414 314
339 iso_pu_bacteria 2643221579 2643908687 314
340 3300047318 Ga0495636_0024785 Ga0495636_0024785_1257_2258 316
341 3300032004 Ga0307414_10133443 Ga0307414_101334432 317
342 iso_pu_bacteria 2747842501 2748015590 317
343 3300005331 Ga0070670_100133253 Ga0070670_1001332532 318
344 3300005334 Ga0068869_100004548 Ga0068869_1000045481 318
345 3300005353 Ga0070669_100190481 Ga0070669_1001904812 318
346 3300005356 Ga0070674_100125637 Ga0070674_1001256372 318
347 3300005367 Ga0070667_100148710 Ga0070667_1001487102 318
348 3300009176 Ga0105242_10140243 Ga0105242_101402432 318
349 3300013308 Ga0157375_10011199 Ga0157375_100111999 318
350 3300025304 Ga0209257_1051841 Ga0209257_10518411 318
351 3300025935 Ga0207709_10118918 Ga0207709_101189182 318
352 3300025937 Ga0207669_10077056 Ga0207669_100770562 318
353 3300025940 Ga0207691_10002537 Ga0207691_100025374 318
354 3300025942 Ga0207689_10126714 Ga0207689_101267143 318
355 3300002774 JGI25150J39212_1000280 JGI25150J39212_100028011 319
356 3300003187 JGI25151J46595_10000207 JGI25151J46595_1000020724 319
357 3300003215 JGI25153J46596_10000146 JGI25153J46596_1000014624 319
358 3300025245 Ga0207425_1000011 Ga0207425_100001144 319
359 3300025258 Ga0209129_1000273 Ga0209129_100027310 319
360 3300025294 Ga0209025_1000054 Ga0209025_1000054123 319
361 3300025297 Ga0209758_1000062 Ga0209758_1000062123 319
362 3300025935 Ga0207709_10056409 Ga0207709_100564092 319
363 3300041453 Ga0451797_0718854 Ga0451797_0718854_182_1207 319
364 3300048921 Ga0496118_0057707 Ga0496118_0057707_208_1185 319
365 3300048929 Ga0496126_0063298 Ga0496126_0063298_1616_2593 319

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00701

DHDPS

Dihydrodipicolinate synthetase family

64

349

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
3flu-assembly1.cif.gz_B crystal structure of dihydrodipicolinate synthase from the pathogen neisseria meningitidis 0.9543 19 308
3pud-assembly1.cif.gz_A crystal structure of dhydrodipicolinate synthase from acinetobacter baumannii at 2.8a resolution 0.9531 19 308
6mqh-assembly1.cif.gz_A crystal structure of 4-hydroxy-tetrahydrodipicolinate synthase (htpa synthase) from burkholderia mallei 0.9517 18 308
3noe-assembly1.cif.gz_A crystal structure of dihydrodipicolinate synthase from pseudomonas aeruginosa 0.9503 19 308
3qze-assembly2.cif.gz_D crystal structure of dapa (pa1010) at 1.6 a resolution 0.9502 20 308
ID Description Score Start End Superfamily
3pb2D00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.948 21 308 3.20.20.70
1xl9D00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.941 18 303 3.20.20.70
5f1uA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9398 19 304 3.20.20.70
4fhaA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9375 21 304 3.20.20.70
2rfgB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9347 19 309 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A356JIR9-F1-model_v4 deleted 0.9871 171 314
AF-A0A356JIR9-F1-model_v4 deleted 0.9804 171 314
AF-A0A5Q4GE32-F1-model_v4 4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7) 0.97 19 306 GO:0005829
GO:0008840
GO:0009089
GO:0019877
AF-A0A2J7U4B7-F1-model_v4 deleted 0.9642 25 237
AF-A0A2J1DZ32-F1-model_v4 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) 0.9635 105 286 GO:0005829
GO:0008840
GO:0009089
GO:0019877

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pLDDT pTM Quality
90.41 0.89 High
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Predicted Structure (AlphaFold2)

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