F423236

General Info

Members Datasets Scaffolds Average Seq Length
364 237 728 329

Family's Representative Sequence

Representative Sequence 3300005467|Ga0070706_100338263|Ga0070706_1003382631
Length 366
Sequence LENIEVMETGLVTSRIGLGTWAIGGWMWGGTDEAESIRTIRAALDLGITLIDTAPAYGFGRSEELVGQAIAESGARDRVLIATKAGLEWRDGQVFRNASAHRVRKEVEDSLRRLRTDHIDVYQVHWPDPLVPIEETAGVLRRLFDQGKIRAIGVSNFSPDQMTAFRSAAPLHVLQPPYNLFERQIESDVLPYARQHHLTVLAYGSLCRGLLTGRMRGDTRFTGDDLRASDPKFLPPRYSQYLSAVEALDDLARQRYGKSVLALAVRWVLDQGPTVALWGARHPEQLAPIRDALGWQIDEETRREIDRILHATVTDPIGPEFMAPPARRSAKARVGKTADPRPAPAMSQPGAVDRKLELPTRSASTP

Samples

Sample ID Description Type Environment
1 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
2 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
3 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
4 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
5 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
6 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
7 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
12 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
19 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
20 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
23 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
24 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
25 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
26 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
27 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
28 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
29 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
30 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
33 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
34 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
35 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
36 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
37 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
38 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
39 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
40 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
45 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
46 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
47 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
48 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
49 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
50 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
51 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
52 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
53 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
54 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
64 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
66 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
67 3300031010 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
68 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
69 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
70 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
71 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
72 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
73 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
74 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
75 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
76 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
77 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
78 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
79 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
80 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
81 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
82 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
83 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
84 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
85 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
86 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
87 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
88 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
89 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
90 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
91 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
92 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
93 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
94 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
95 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
96 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
97 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
98 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
99 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
100 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
101 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
102 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
103 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
104 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
105 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
106 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
107 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
108 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
109 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
110 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
111 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
112 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
113 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
114 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
115 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
116 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
117 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
118 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
119 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
120 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
121 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
122 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
123 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
124 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
125 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
126 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
127 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
128 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
129 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
130 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
131 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
132 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
133 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
134 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
135 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
136 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
139 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
140 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
141 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
142 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
143 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
144 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
145 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
146 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
147 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
148 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
149 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
150 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
151 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
152 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
153 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
154 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
155 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
156 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
157 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
158 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
159 2510917028 Rhizobium sp. CF122 Isolate Rhizosphere
160 2513237144 Rhizobium sullae WSM1592 Isolate Nodule
161 2513237146 Rhizobium mongolense USDA 1844 (Illumina) Isolate Nodule
162 2534681796 Rhizobium grahamii CCGE 502 Isolate Nodule
163 2540341094 Bacillus subtilis XF-1 Isolate Rhizosphere
164 2554235469 Sporolactobacillus laevolacticus DSM 442 Isolate Rhizosphere
165 2576861424 Paenibacillus sabinae T27 Isolate Rhizosphere
166 2579778775 Paenibacillus durus P3L-5 Isolate Unclassified
167 2582581294 Rhizobium sp. CF394 Isolate Rhizosphere
168 2599185170 Rhizobium mongolense USDA 1844 (PacBio) Isolate Nodule
169 2619619294 Paenibacillus durus ATCC 35681 Isolate Unclassified
170 2643221599 Rhizobium sp. Root708 Isolate Unclassified
171 2643221618 Ensifer sp. Root231 Isolate Unclassified
172 2643221626 Ensifer sp. Root31 Isolate Unclassified
173 2643221637 Rhizobium sp. Root1212 Isolate Unclassified
174 2643221655 Ensifer sp. Root1252 Isolate Unclassified
175 2643221659 Ensifer sp. Root127 Isolate Unclassified
176 2643221688 Rhizobium sp. Root482 Isolate Unclassified
177 2643221698 Ensifer sp. Root142 Isolate Unclassified
178 2643221712 Ensifer sp. Root258 Isolate Unclassified
179 2643221718 Rhizobium sp. Root268 Isolate Unclassified
180 2711768088 Sporolactobacillus terrae DSM 11697 Isolate Rhizosphere
181 2791355091 Sinorhizobium sp. FG01 Isolate Nodule
182 2791355094 Sinorhizobium sp. BJ1 Isolate Nodule
183 2791355256 Rhizobium sp. M10 Isolate Nodule
184 2791355261 Rhizobium sp. J15 Isolate Nodule
185 2791355262 Rhizobium sp. M1 Isolate Nodule
186 2791355265 Rhizobium sp. H4 Isolate Nodule
187 2802429605 Rhizobium sophoriradicis L101 Isolate Nodule
188 2808606399 Bacillus sp. SJZ110 Isolate Rhizosphere
189 2816332295 Bacillus paralicheniformis MDJK30 Isolate Rhizosphere
190 2838035591 Rhizobium mongolense SEMIA 4087 Isolate Nodule
191 2838661181 Rhizobium mongolense SEMIA 402 Isolate Nodule
192 2838668709 Rhizobium sophoriradicis SEMIA 403 Isolate Nodule
193 2838701080 Rhizobium aethiopicum SEMIA 428 Isolate Nodule
194 2842146304 Rhizobium sophoriradicis SEMIA 454 Isolate Nodule
195 2842192696 Rhizobium esperanzae SEMIA 468 Isolate Nodule
196 2842205361 Rhizobium etli SEMIA 471 Isolate Nodule
197 2842250916 Rhizobium etli SEMIA 484 Isolate Nodule
198 2842278818 Rhizobium etli SEMIA 489 Isolate Nodule
199 2842285085 Rhizobium lentis SEMIA 490 Isolate Nodule
200 2842402390 Rhizobium lentis SEMIA 4033 Isolate Nodule
201 2842409023 Rhizobium lentis SEMIA 4034 Isolate Nodule
202 2842415677 Rhizobium lentis SEMIA 4036 Isolate Nodule
203 2842489311 Rhizobium sophoriradicis SEMIA 4061 Isolate Nodule
204 2848992105 Sinorhizobium fredii CCBAU 25509 Isolate Unclassified
205 2854911287 Brucella lupini LUP21 Isolate Unclassified
206 2855872281 Sinorhizobium fredii PCH1 Isolate Nodule
207 2860837431 Bacillus sp. WR11 Isolate Unclassified
208 2881636855 Paenibacillus sp. 7197 Isolate Rhizosphere
209 2891373044 Shinella sp. AETb1-6 Isolate Rhizosphere
210 2906626472 Bradyrhizobium hipponense aSej3 Isolate Unclassified
211 2923556063 Rhizobium tibeticum 3740 Isolate Unclassified
212 2933016740 Rhizobium sp. SEMIA 4085 Isolate Nodule
213 2935630451 Bradyrhizobium sp. I1.14.4 Isolate Nodule
214 2941499720 Ensifer sp. 4252 Isolate Rhizosphere
215 2941507105 Bradyrhizobium sp. i1.12.3 Isolate Nodule
216 2941515067 Bradyrhizobium sp. i1.14.1 Isolate Nodule
217 2941523033 Bradyrhizobium sp. i1.8.4 Isolate Nodule
218 2962290636 Bacillus subtilis TLO3 Isolate Rhizosphere
219 2969136845 Bacillus subtilis TLO3 Isolate Rhizosphere
220 2969765954 Bacillus intestinalis GM2 Isolate Rhizosphere
221 2969770375 Bacillus subtilis GM5 Isolate Rhizosphere
222 2971511577 Paenibacillus apii 7124 Isolate Rhizosphere
223 2980176882 Paenibacillus apii 7028 Isolate Rhizosphere
224 2980492589 Bacillus subtilis GQJK2 Isolate Rhizosphere
225 2989349275 Shinella kummerowiae CCBAU 25048 Isolate Unclassified
226 2996893221 Rhizobium sp. R635 Isolate Nodule
227 3003930520 Sinorhizobium sp. BG8 Isolate Unclassified
228 3006858327 Bacillus paralicheniformis SUBG0010 Isolate Unclassified
229 3006879489 Bacillus atrophaeus UCMB-5137 Isolate Rhizosphere
230 643692032 Sinorhizobium fredii NGR234 Isolate Nodule
231 8005289223 Rhizobium bangladeshense 1002 Isolate Nodule
232 8005382845 Rhizobium sp. R634 Isolate Nodule
233 8005395548 Rhizobium sp. R339 Isolate Nodule
234 8005542996 Rhizobium grahamii CCGM3 Isolate Unclassified
235 8022653035 Bacillus sp. Rc4 Isolate Unclassified
236 8024501048 Rhizobium sp. H4 Isolate Nodule
237 8056382006 Rhizobium croatiense 13T Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 77.75
Metatranscriptomes 0.55
Isolates 21.7

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.04
Nodule 10.44
Rhizoplane 3.02
Rhizosphere 64.56
Stem 0
Stem Tuber 0
Unclassified 1.37

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070706_100338263 3300005467 Bacteria 1403
2 JGI25152J39213_1006421 3300002773 Bacteria 3214
3 JGI25160J50197_1014823 3300003354 Bacteria 2588
4 Ga0006562J51391_1050073 3300003578 Bacteria 2216
5 JGI25404J52841_10000421 3300003659 Bacteria 5930
6 Ga0055524_1002440 3300003775 Bacteria 9582
7 Ga0055528_1006633 3300003790 Bacteria 5224
8 Ga0070671_100102321 3300005355 Bacteria 2404
9 Ga0070703_10017070 3300005406 Bacteria 2089
10 Ga0070713_100056511 3300005436 Unclassified 3264
11 Ga0070710_10225990 3300005437 Bacteria 1193
12 Ga0070700_100148992 3300005441 Bacteria 1598
13 Ga0070708_100016385 3300005445 Bacteria 6148
14 Ga0070708_100022490 3300005445 Bacteria 5348
15 Ga0070708_100032103 3300005445 Bacteria 4551
16 Ga0070708_100045821 3300005445 Bacteria 3855
17 Ga0070681_10129450 3300005458 Bacteria 2456
18 Ga0070706_100022158 3300005467 Bacteria 5849
19 Ga0070706_100026355 3300005467 Bacteria 5349
20 Ga0070706_100047160 3300005467 Bacteria 3976
21 Ga0070706_100083279 3300005467 Bacteria 2963
22 Ga0070706_100175014 3300005467 Bacteria 2004
23 Ga0070706_100473385 3300005467 Bacteria 1165
24 Ga0070707_100001406 3300005468 Bacteria 23624
25 Ga0070707_100004517 3300005468 Bacteria 13028
26 Ga0070707_100118876 3300005468 Bacteria 2565
27 Ga0070707_100201001 3300005468 Bacteria 1942
28 Ga0070698_100012796 3300005471 Bacteria 8887
29 Ga0070698_100019568 3300005471 Bacteria 7103
30 Ga0070698_100068972 3300005471 Bacteria 3552
31 Ga0070699_100014160 3300005518 Bacteria 6861
32 Ga0070699_100133110 3300005518 Bacteria 2192
33 Ga0070697_100005391 3300005536 Bacteria 9844
34 Ga0070697_100008888 3300005536 Bacteria 7845
35 Ga0070697_100112828 3300005536 Bacteria 2267
36 Ga0070697_100153595 3300005536 Bacteria 1942
37 Ga0070695_100008956 3300005545 Bacteria 5947
38 Ga0070696_100263404 3300005546 Bacteria 1308
39 Ga0070696_100280932 3300005546 Bacteria 1269
40 Ga0070665_100007067 3300005548 Bacteria 11409
41 Ga0070704_100056848 3300005549 Bacteria 2779
42 Ga0068860_100141241 3300005843 Bacteria 2315
43 Ga0081455_10001874 3300005937 Bacteria 25305
44 Ga0081455_10002992 3300005937 Bacteria 19712
45 Ga0081540_1000727 3300005983 Bacteria 30338
46 Ga0081540_1038013 3300005983 Bacteria 2543
47 Ga0075365_10006979 3300006038 Bacteria 6277
48 Ga0075363_100162740 3300006048 Bacteria 1264
49 Ga0070712_100170677 3300006175 Bacteria 1687
50 Ga0075362_10000315 3300006177 Bacteria 13734
51 Ga0075369_10015557 3300006186 Bacteria 3056
52 Ga0075428_100014694 3300006844 Bacteria 8696
53 Ga0075428_100030902 3300006844 Bacteria 5922
54 Ga0075428_100072331 3300006844 Bacteria 3767
55 Ga0075428_100424470 3300006844 Bacteria 1424
56 Ga0075430_100006039 3300006846 Bacteria 10214
57 Ga0075430_100027209 3300006846 Bacteria 4862
58 Ga0075431_100009314 3300006847 Bacteria 9852
59 Ga0075431_100037457 3300006847 Bacteria 4996
60 Ga0075431_100132127 3300006847 Bacteria 2574
61 Ga0075433_10001538 3300006852 Bacteria 17045
62 Ga0075433_10015576 3300006852 Bacteria 6243
63 Ga0075433_10051653 3300006852 Bacteria 3580
64 Ga0075433_10101231 3300006852 Bacteria 2551
65 Ga0075434_100003160 3300006871 Bacteria 14687
66 Ga0075434_100016642 3300006871 Bacteria 7071
67 Ga0075434_100051417 3300006871 Bacteria 4095
68 Ga0075434_100623600 3300006871 Bacteria 1097
69 Ga0075429_100003716 3300006880 Bacteria 13012
70 Ga0075429_100011403 3300006880 Bacteria 7699
71 Ga0075436_100000863 3300006914 Bacteria 20151
72 Ga0075436_100003267 3300006914 Bacteria 11107
73 Ga0075436_100014790 3300006914 Bacteria 5347
74 Ga0075436_100048869 3300006914 Bacteria 2919
75 Ga0075436_100065225 3300006914 Bacteria 2517
76 Ga0075436_100081794 3300006914 Bacteria 2239
77 Ga0075436_100238600 3300006914 Bacteria 1292
78 Ga0075435_100018625 3300007076 Bacteria 5288
79 Ga0075435_100076261 3300007076 Bacteria 2747
80 Ga0075435_100100399 3300007076 Bacteria 2397
81 Ga0075435_100169916 3300007076 Bacteria 1839
82 Ga0075435_100220217 3300007076 Bacteria 1612
83 Ga0099794_10000385 3300007265 Bacteria 15053
84 Ga0099794_10001693 3300007265 Bacteria 7795
85 Ga0099794_10003049 3300007265 Bacteria 6328
86 Ga0111539_10010440 3300009094 Bacteria 11689
87 Ga0111539_10016053 3300009094 Bacteria 9293
88 Ga0114129_10020989 3300009147 Bacteria 9277
89 Ga0114129_10109951 3300009147 Bacteria 3804
90 Ga0114129_10121632 3300009147 Bacteria 3592
91 Ga0105248_10100685 3300009177 Bacteria 3256
92 Ga0105248_10447143 3300009177 Bacteria 1456
93 Ga0105238_10027316 3300009551 Bacteria 5814
94 Ga0105249_10200484 3300009553 Bacteria 1953
95 Ga0105239_10154498 3300010375 Bacteria 2562
96 Ga0163162_10032926 3300013306 Bacteria 5148
97 Ga0163162_10402773 3300013306 Bacteria 1501
98 Ga0157379_10169374 3300014968 Bacteria 1971
99 Ga0163161_10121780 3300017792 Bacteria 1961
100 Ga0209129_1001050 3300025258 Bacteria 16310
101 Ga0209673_1002725 3300025273 Bacteria 11655
102 Ga0209025_1000416 3300025294 Bacteria 85510
103 Ga0209564_1039392 3300025295 Bacteria 1299
104 Ga0207426_1001246 3300025302 Bacteria 22365
105 Ga0207653_10006222 3300025885 Bacteria 3723
106 Ga0207699_10056191 3300025906 Unclassified 2345
107 Ga0207684_10000548 3300025910 Bacteria 46219
108 Ga0207684_10017453 3300025910 Bacteria 6156
109 Ga0207684_10033991 3300025910 Bacteria 4335
110 Ga0207684_10039162 3300025910 Bacteria 4022
111 Ga0207684_10043650 3300025910 Bacteria 3801
112 Ga0207684_10055744 3300025910 Bacteria 3353
113 Ga0207684_10095449 3300025910 Bacteria 2537
114 Ga0207693_10006734 3300025915 Bacteria 9487
115 Ga0207693_10162584 3300025915 Bacteria 1757
116 Ga0207646_10000165 3300025922 Bacteria 89540
117 Ga0207646_10001143 3300025922 Bacteria 33797
118 Ga0207646_10013899 3300025922 Bacteria 7677
119 Ga0207646_10020060 3300025922 Bacteria 6199
120 Ga0207646_10030932 3300025922 Bacteria 4849
121 Ga0207646_10064594 3300025922 Bacteria 3267
122 Ga0207646_10136466 3300025922 Bacteria 2209
123 Ga0207646_10378994 3300025922 Bacteria 1278
124 Ga0207700_10247522 3300025928 Bacteria 1521
125 Ga0207665_10041003 3300025939 Bacteria 3090
126 Ga0207665_10090223 3300025939 Bacteria 2124
127 Ga0207665_10261713 3300025939 Bacteria 1282
128 Ga0207641_10154661 3300026088 Bacteria 2080
129 Ga0209588_1015604 3300027671 Bacteria 2337
130 Ga0207428_10002129 3300027907 Bacteria 19919
131 Ga0207428_10075534 3300027907 Bacteria 2640
132 Ga0207428_10251219 3300027907 Bacteria 1318
133 Ga0268266_10018378 3300028379 Bacteria 5957
134 Ga0265338_10152417 3300028800 Bacteria 1794
135 Ga0307511_10000452 3300030521 Bacteria 44212
136 Ga0307511_10002304 3300030521 Bacteria 19935
137 Ga0307511_10014391 3300030521 Bacteria 7705
138 Ga0265771_1000542 3300031010 Bacteria 1437
139 Ga0265330_10056009 3300031235 Bacteria 1721
140 Ga0265339_10012257 3300031249 Bacteria 5241
141 Ga0265331_10092481 3300031250 Bacteria 1397
142 Ga0307513_10024897 3300031456 Bacteria 6952
143 Ga0307508_10328529 3300031616 Bacteria 1121
144 Ga0373926_0128970 3300035083 Bacteria 957
145 Ga0373936_0004223 3300035113 Bacteria 5421
146 Ga0373936_0006775 3300035113 Bacteria 4312
147 Ga0373936_0055413 3300035113 Bacteria 1610
148 Ga0373924_0077897 3300035410 Bacteria 1406
149 Ga0373935_0180640 3300035692 Bacteria 1449
150 Ga0373947_0091676 3300035725 Bacteria 1896
151 Ga0316582_0129806 3300036647 Bacteria 1692
152 Ga0373925_0015126 3300037068 Bacteria 5578
153 Ga0395900_0008616 3300037418 Bacteria 10484
154 Ga0395898_0036969 3300037466 Bacteria 4846
155 Ga0395905_0019982 3300037471 Bacteria 6347
156 Ga0436364_0271009 3300037853 Bacteria 4367
157 Ga0395901_0019835 3300038443 Bacteria 6877
158 Ga0436365_0763619 3300039437 Bacteria 54172
159 Ga0436365_1800666 3300039437 Bacteria 1268
160 Ga0436361_0046615 3300039447 Bacteria 4233
161 Ga0436361_0310364 3300039447 Unclassified 3117
162 Ga0436361_0713233 3300039447 Unclassified 2524
163 Ga0436362_1057687 3300039453 Bacteria 1412
164 Ga0436362_1087513 3300039453 Bacteria 1434
165 Ga0439439_0030409 3300041406 Bacteria 1373
166 Ga0439466_0018147 3300041411 Bacteria 2527
167 Ga0439465_0001249 3300041413 Bacteria 8208
168 Ga0439465_0013026 3300041413 Bacteria 2598
169 Ga0439465_0047122 3300041413 Bacteria 1404
170 Ga0451807_0478408 3300041486 Bacteria 1671
171 Ga0439432_023042 3300042006 Bacteria 2053
172 Ga0439449_0048076 3300042007 Bacteria 1580
173 Ga0439462_0024317 3300042015 Bacteria 1591
174 Ga0451577_0254648 3300042876 Bacteria 1589
175 Ga0453683_0241611 3300044673 Bacteria 1150
176 Ga0453684_0022068 3300044712 Bacteria 9468
177 Ga0495629_0000047 3300046459 Bacteria 109814
178 Ga0495629_0117481 3300046459 Bacteria 1853
179 Ga0495651_0087650 3300046462 Bacteria 2340
180 Ga0495653_0134493 3300046463 Bacteria 1746
181 Ga0495582_0002543 3300046473 Bacteria 10154
182 Ga0495639_0039181 3300046475 Bacteria 2130
183 Ga0495662_0075432 3300046476 Bacteria 1636
184 Ga0495585_0178589 3300046492 Bacteria 1093
185 Ga0495630_0095846 3300046517 Bacteria 2243
186 Ga0495630_0131004 3300046517 Bacteria 1905
187 Ga0495652_0057665 3300046529 Bacteria 3292
188 Ga0495640_0107038 3300046533 Bacteria 1830
189 Ga0495656_0066858 3300046615 Bacteria 1585
190 Ga0495635_0013607 3300046663 Bacteria 5693
191 Ga0495635_0107691 3300046663 Bacteria 1904
192 Ga0495658_0022986 3300046683 Bacteria 3305
193 Ga0495670_0094902 3300046691 Bacteria 1530
194 Ga0495600_0180598 3300046809 Bacteria 1360
195 Ga0495674_0164387 3300047319 Bacteria 1855
196 Ga0495674_0216966 3300047319 Bacteria 1583
197 Ga0495676_0036996 3300047321 Bacteria 4069
198 Ga0495684_0003077 3300047471 Bacteria 13110
199 Ga0496103_0050138 3300048906 Bacteria 2582
200 Ga0496104_0004530 3300048907 Bacteria 12108
201 Ga0496105_0137314 3300048908 Bacteria 2014
202 Ga0496107_0060781 3300048910 Bacteria 2735
203 Ga0496108_0408574 3300048911 Bacteria 1186
204 Ga0496109_0132773 3300048912 Bacteria 2325
205 Ga0496110_0011171 3300048913 Bacteria 7339
206 Ga0496111_0043628 3300048914 Bacteria 3223
207 Ga0496113_0081936 3300048916 Bacteria 2474
208 Ga0496113_0302135 3300048916 Bacteria 1282
209 Ga0496116_0001823 3300048919 Bacteria 23070
210 Ga0496116_0020434 3300048919 Bacteria 5028
211 Ga0496116_0044910 3300048919 Bacteria 2995
212 Ga0496116_0062007 3300048919 Bacteria 2417
213 Ga0496117_0001252 3300048920 Bacteria 37812
214 Ga0496117_0199202 3300048920 Bacteria 1133
215 Ga0496118_0022802 3300048921 Bacteria 5458
216 Ga0496118_0173110 3300048921 Bacteria 1316
217 Ga0496119_0013000 3300048922 Bacteria 6688
218 Ga0496120_0093632 3300048923 Bacteria 1601
219 Ga0496121_0008702 3300048924 Bacteria 11852
220 Ga0496121_0077863 3300048924 Bacteria 2638
221 Ga0496122_0000770 3300048925 Bacteria 61729
222 Ga0496122_0023194 3300048925 Bacteria 5482
223 Ga0496122_0138423 3300048925 Bacteria 1528
224 Ga0496123_0000018 3300048926 Bacteria 404553
225 Ga0496123_0004684 3300048926 Bacteria 14173
226 Ga0496123_0053127 3300048926 Bacteria 2681
227 Ga0496124_0001082 3300048927 Bacteria 43057
228 Ga0496124_0020485 3300048927 Bacteria 6108
229 Ga0496124_0349030 3300048927 Bacteria 1047
230 Ga0496125_0005889 3300048928 Bacteria 13437
231 Ga0496125_0010849 3300048928 Bacteria 9171
232 Ga0496125_0110141 3300048928 Bacteria 1997
233 Ga0496126_0000207 3300048929 Bacteria 131816
234 Ga0496126_0061378 3300048929 Bacteria 3377
235 Ga0496126_0190158 3300048929 Bacteria 1739
236 Ga0501034_0019701 3300049571 Bacteria 6897
237 Ga0501048_0085508 3300049582 Bacteria 2224
238 Ga0501071_0373845 3300049587 Bacteria 1086
239 nmdc:mga03683_84_c1 3300050489 Bacteria 34650
240 nmdc:mga03n38_101968_c1 3300050490 Bacteria 1385
241 nmdc:mga05p37_454479_c1 3300050507 Bacteria 1482
242 nmdc:mga05p37_5493_c1 3300050507 Bacteria 14891
243 nmdc:mga05p37_59841_c1 3300050507 Bacteria 4691
244 nmdc:mga05p37_8315_c1 3300050507 Bacteria 12271
245 nmdc:mga09592_2214_c1 3300050508 Bacteria 15651
246 nmdc:mga09592_27844_c1 3300050508 Bacteria 4691
247 nmdc:mga09592_3801_c1 3300050508 Bacteria 12153
248 nmdc:mga0qj67_1410_c1 3300050509 Bacteria 16811
249 nmdc:mga0qj67_9434_c1 3300050509 Bacteria 7264
250 nmdc:mga06r32_5011_c1 3300050510 Bacteria 11923
251 nmdc:mga06r32_9464_c1 3300050510 Bacteria 8796
252 nmdc:mga08y16_6016_c1 3300050511 Bacteria 12717
253 nmdc:mga08y16_63127_c1 3300050511 Bacteria 3868
254 nmdc:mga08y16_8631_c1 3300050511 Bacteria 10687
255 nmdc:mga0n895_103831_c1 3300050512 Unclassified 2854
256 nmdc:mga0n895_18186_c1 3300050512 Bacteria 6498
257 nmdc:mga0n895_190801_c1 3300050512 Bacteria 2080
258 nmdc:mga0n895_2985_c1 3300050512 Bacteria 13424
259 nmdc:mga0n895_607_c1 3300050512 Bacteria 24823
260 nmdc:mga0n895_61144_c1 3300050512 Bacteria 3718
261 nmdc:mga0rr50_184755_c1 3300050513 Bacteria 1706
262 nmdc:mga0rr50_246653_c1 3300050513 Bacteria 1482
263 nmdc:mga0rr50_26322_c1 3300050513 Bacteria 4056
264 nmdc:mga0rr50_27801_c1 3300050513 Bacteria 3967
265 nmdc:mga0rr50_29247_c1 3300050513 Bacteria 3883
266 nmdc:mga0rr50_93940_c1 3300050513 Bacteria 2341
267 nmdc:mga08x19_103584_c1 3300050514 Bacteria 1890
268 nmdc:mga08x19_266031_c1 3300050514 Bacteria 1186
269 nmdc:mga08x19_2996_c1 3300050514 Bacteria 10144
270 nmdc:mga08x19_42981_c1 3300050514 Bacteria 2882
271 nmdc:mga08x19_59329_c1 3300050514 Bacteria 2477
272 nmdc:mga08x19_867_c1 3300050514 Bacteria 19193
273 nmdc:mga0a205_116692_c1 3300050515 Bacteria 2568
274 nmdc:mga0a205_19322_c1 3300050515 Bacteria 6423
275 nmdc:mga0a205_3815_c1 3300050515 Bacteria 13507
276 nmdc:mga0a205_699_c1 3300050515 Bacteria 26913
277 nmdc:mga0sz30_12201_c1 3300050516 Bacteria 3337
278 Ga0495601_0099480 3300053077 Bacteria 1877
279 Ga0495612_0035319 3300053078 Bacteria 2026
280 Ga0500555_000154 3300053103 Bacteria 32869
281 Ga0500556_0000410 3300053104 Bacteria 31324
282 Ga0500595_015234 3300053119 Bacteria 2891
283 Ga0500652_128789 3300053131 Bacteria 1056
284 Ga0500616_0001251 3300053153 Bacteria 25463
285 Ga0500637_0063937 3300053178 Bacteria 2110
286 2511182029 2510917028 Bacteria 6185411
287 2513909391 2513237144 Bacteria 7530820
288 2513925059 2513237146 Bacteria 7166346
289 2535514373 2534681796 Bacteria 7146037
290 2540606091 2540341094 Bacteria 4061186
291 2556063058 2554235469 Bacteria 3590176
292 2578336579 2576861424 Bacteria 5270569
293 2580935393 2579778775 Bacteria 5360914
294 2585201458 2582581294 Bacteria 6626667
295 2599416633 2599185170 Bacteria 7295545
296 2621274782 2619619294 Bacteria 5575484
297 2644002814 2643221599 Bacteria 6292121
298 2644104039 2643221618 Bacteria 7717186
299 2644149415 2643221626 Bacteria 8069654
300 2644208530 2643221637 Bacteria 5345260
301 2644306912 2643221655 Bacteria 7722067
302 2644337259 2643221659 Bacteria 7890716
303 2644494881 2643221688 Bacteria 5260751
304 2644540431 2643221698 Bacteria 7756764
305 2644619151 2643221712 Bacteria 7729434
306 2644652061 2643221718 Bacteria 5345506
307 2712199202 2711768088 Bacteria 3195027
308 2792623575 2791355091 Bacteria 6135441
309 2792641264 2791355094 Bacteria 7011481
310 2793297766 2791355256 Bacteria 6798008
311 2793328618 2791355261 Bacteria 6661293
312 2793336536 2791355262 Bacteria 6774204
313 2793356297 2791355265 Bacteria 6539969
314 2805932084 2802429605 Bacteria 6875453
315 2809054294 2808606399 Bacteria 4021018
316 2817479142 2816332295 Bacteria 4352468
317 2838036742 2838035591 Bacteria 7166484
318 2838662224 2838661181 Bacteria 7385261
319 2838668858 2838668709 Bacteria 6671819
320 2838701482 2838701080 Bacteria 6669771
321 2842146453 2842146304 Bacteria 5957337
322 2842194156 2842192696 Bacteria 6147454
323 2842210617 2842205361 Bacteria 6340321
324 2842251317 2842250916 Bacteria 6579627
325 2842284223 2842278818 Bacteria 6340002
326 2842288149 2842285085 Bacteria 6011953
327 2842405415 2842402390 Bacteria 6681310
328 2842411828 2842409023 Bacteria 6687331
329 2842418645 2842415677 Bacteria 6596907
330 2842490915 2842489311 Bacteria 6620893
331 2848996851 2848992105 Bacteria 6810864
332 2854915018 2854911287 Bacteria 5582813
333 2855875549 2855872281 Bacteria 6964271
334 2860838468 2860837431 Bacteria 4202080
335 2881641221 2881636855 Bacteria 5205297
336 2891376860 2891373044 Bacteria 5202277
337 2906629571 2906626472 Bacteria 8826946
338 2923561690 2923556063 Bacteria 6793593
339 2933016946 2933016740 Bacteria 6355406
340 2935636346 2935630451 Bacteria 8169952
341 2941502547 2941499720 Bacteria 7599444
342 2941512977 2941507105 Bacteria 8166816
343 2941520721 2941515067 Bacteria 8166720
344 2941528736 2941523033 Bacteria 8169134
345 2962291825 2962290636 Bacteria 4072939
346 2969137875 2969136845 Bacteria 3923176
347 2969768346 2969765954 Bacteria 4216713
348 2969771659 2969770375 Bacteria 4271280
349 2971515789 2971511577 Bacteria 5404012
350 2980181682 2980176882 Bacteria 5397533
351 2980493650 2980492589 Bacteria 4072961
352 2989352548 2989349275 Bacteria 6349068
353 2996895461 2996893221 Bacteria 5823108
354 3003935869 3003930520 Bacteria 5667563
355 3006859469 3006858327 Bacteria 4317835
356 3006880116 3006879489 Bacteria 4064221
357 643822615 643692032 Bacteria 6891900
358 8005290181 8005289223 Bacteria 6634003
359 8005384310 8005382845 Bacteria 6732062
360 8005401493 8005395548 Bacteria 6806915
361 8005543004 8005542996 Bacteria 7077758
362 8022655040 8022653035 Bacteria 4035078
363 8024501799 8024501048 Bacteria 6427847
364 8056383691 8056382006 Bacteria 6408074
365 Ga0070706_100338263
366 JGI25152J39213_1006421
367 JGI25160J50197_1014823
368 Ga0006562J51391_1050073
369 JGI25404J52841_10000421
370 Ga0055524_1002440
371 Ga0055528_1006633
372 Ga0070671_100102321
373 Ga0070703_10017070
374 Ga0070713_100056511
375 Ga0070710_10225990
376 Ga0070700_100148992
377 Ga0070708_100016385
378 Ga0070708_100022490
379 Ga0070708_100032103
380 Ga0070708_100045821
381 Ga0070681_10129450
382 Ga0070706_100022158
383 Ga0070706_100026355
384 Ga0070706_100047160
385 Ga0070706_100083279
386 Ga0070706_100175014
387 Ga0070706_100473385
388 Ga0070707_100001406
389 Ga0070707_100004517
390 Ga0070707_100118876
391 Ga0070707_100201001
392 Ga0070698_100012796
393 Ga0070698_100019568
394 Ga0070698_100068972
395 Ga0070699_100014160
396 Ga0070699_100133110
397 Ga0070697_100005391
398 Ga0070697_100008888
399 Ga0070697_100112828
400 Ga0070697_100153595
401 Ga0070695_100008956
402 Ga0070696_100263404
403 Ga0070696_100280932
404 Ga0070665_100007067
405 Ga0070704_100056848
406 Ga0068860_100141241
407 Ga0081455_10001874
408 Ga0081455_10002992
409 Ga0081540_1000727
410 Ga0081540_1038013
411 Ga0075365_10006979
412 Ga0075363_100162740
413 Ga0070712_100170677
414 Ga0075362_10000315
415 Ga0075369_10015557
416 Ga0075428_100014694
417 Ga0075428_100030902
418 Ga0075428_100072331
419 Ga0075428_100424470
420 Ga0075430_100006039
421 Ga0075430_100027209
422 Ga0075431_100009314
423 Ga0075431_100037457
424 Ga0075431_100132127
425 Ga0075433_10001538
426 Ga0075433_10015576
427 Ga0075433_10051653
428 Ga0075433_10101231
429 Ga0075434_100003160
430 Ga0075434_100016642
431 Ga0075434_100051417
432 Ga0075434_100623600
433 Ga0075429_100003716
434 Ga0075429_100011403
435 Ga0075436_100000863
436 Ga0075436_100003267
437 Ga0075436_100014790
438 Ga0075436_100048869
439 Ga0075436_100065225
440 Ga0075436_100081794
441 Ga0075436_100238600
442 Ga0075435_100018625
443 Ga0075435_100076261
444 Ga0075435_100100399
445 Ga0075435_100169916
446 Ga0075435_100220217
447 Ga0099794_10000385
448 Ga0099794_10001693
449 Ga0099794_10003049
450 Ga0111539_10010440
451 Ga0111539_10016053
452 Ga0114129_10020989
453 Ga0114129_10109951
454 Ga0114129_10121632
455 Ga0105248_10100685
456 Ga0105248_10447143
457 Ga0105238_10027316
458 Ga0105249_10200484
459 Ga0105239_10154498
460 Ga0163162_10032926
461 Ga0163162_10402773
462 Ga0157379_10169374
463 Ga0163161_10121780
464 Ga0209129_1001050
465 Ga0209673_1002725
466 Ga0209025_1000416
467 Ga0209564_1039392
468 Ga0207426_1001246
469 Ga0207653_10006222
470 Ga0207699_10056191
471 Ga0207684_10000548
472 Ga0207684_10017453
473 Ga0207684_10033991
474 Ga0207684_10039162
475 Ga0207684_10043650
476 Ga0207684_10055744
477 Ga0207684_10095449
478 Ga0207693_10006734
479 Ga0207693_10162584
480 Ga0207646_10000165
481 Ga0207646_10001143
482 Ga0207646_10013899
483 Ga0207646_10020060
484 Ga0207646_10030932
485 Ga0207646_10064594
486 Ga0207646_10136466
487 Ga0207646_10378994
488 Ga0207700_10247522
489 Ga0207665_10041003
490 Ga0207665_10090223
491 Ga0207665_10261713
492 Ga0207641_10154661
493 Ga0209588_1015604
494 Ga0207428_10002129
495 Ga0207428_10075534
496 Ga0207428_10251219
497 Ga0268266_10018378
498 Ga0265338_10152417
499 Ga0307511_10000452
500 Ga0307511_10002304
501 Ga0307511_10014391
502 Ga0265771_1000542
503 Ga0265330_10056009
504 Ga0265339_10012257
505 Ga0265331_10092481
506 Ga0307513_10024897
507 Ga0307508_10328529
508 Ga0373926_0128970
509 Ga0373936_0004223
510 Ga0373936_0006775
511 Ga0373936_0055413
512 Ga0373924_0077897
513 Ga0373935_0180640
514 Ga0373947_0091676
515 Ga0316582_0129806
516 Ga0373925_0015126
517 Ga0395900_0008616
518 Ga0395898_0036969
519 Ga0395905_0019982
520 Ga0436364_0271009
521 Ga0395901_0019835
522 Ga0436365_0763619
523 Ga0436365_1800666
524 Ga0436361_0046615
525 Ga0436361_0310364
526 Ga0436361_0713233
527 Ga0436362_1057687
528 Ga0436362_1087513
529 Ga0439439_0030409
530 Ga0439466_0018147
531 Ga0439465_0001249
532 Ga0439465_0013026
533 Ga0439465_0047122
534 Ga0451807_0478408
535 Ga0439432_023042
536 Ga0439449_0048076
537 Ga0439462_0024317
538 Ga0451577_0254648
539 Ga0453683_0241611
540 Ga0453684_0022068
541 Ga0495629_0000047
542 Ga0495629_0117481
543 Ga0495651_0087650
544 Ga0495653_0134493
545 Ga0495582_0002543
546 Ga0495639_0039181
547 Ga0495662_0075432
548 Ga0495585_0178589
549 Ga0495630_0095846
550 Ga0495630_0131004
551 Ga0495652_0057665
552 Ga0495640_0107038
553 Ga0495656_0066858
554 Ga0495635_0013607
555 Ga0495635_0107691
556 Ga0495658_0022986
557 Ga0495670_0094902
558 Ga0495600_0180598
559 Ga0495674_0164387
560 Ga0495674_0216966
561 Ga0495676_0036996
562 Ga0495684_0003077
563 Ga0496103_0050138
564 Ga0496104_0004530
565 Ga0496105_0137314
566 Ga0496107_0060781
567 Ga0496108_0408574
568 Ga0496109_0132773
569 Ga0496110_0011171
570 Ga0496111_0043628
571 Ga0496113_0081936
572 Ga0496113_0302135
573 Ga0496116_0001823
574 Ga0496116_0020434
575 Ga0496116_0044910
576 Ga0496116_0062007
577 Ga0496117_0001252
578 Ga0496117_0199202
579 Ga0496118_0022802
580 Ga0496118_0173110
581 Ga0496119_0013000
582 Ga0496120_0093632
583 Ga0496121_0008702
584 Ga0496121_0077863
585 Ga0496122_0000770
586 Ga0496122_0023194
587 Ga0496122_0138423
588 Ga0496123_0000018
589 Ga0496123_0004684
590 Ga0496123_0053127
591 Ga0496124_0001082
592 Ga0496124_0020485
593 Ga0496124_0349030
594 Ga0496125_0005889
595 Ga0496125_0010849
596 Ga0496125_0110141
597 Ga0496126_0000207
598 Ga0496126_0061378
599 Ga0496126_0190158
600 Ga0501034_0019701
601 Ga0501048_0085508
602 Ga0501071_0373845
603 nmdc:mga03683_84_c1
604 nmdc:mga03n38_101968_c1
605 nmdc:mga05p37_454479_c1
606 nmdc:mga05p37_5493_c1
607 nmdc:mga05p37_59841_c1
608 nmdc:mga05p37_8315_c1
609 nmdc:mga09592_2214_c1
610 nmdc:mga09592_27844_c1
611 nmdc:mga09592_3801_c1
612 nmdc:mga0qj67_1410_c1
613 nmdc:mga0qj67_9434_c1
614 nmdc:mga06r32_5011_c1
615 nmdc:mga06r32_9464_c1
616 nmdc:mga08y16_6016_c1
617 nmdc:mga08y16_63127_c1
618 nmdc:mga08y16_8631_c1
619 nmdc:mga0n895_103831_c1
620 nmdc:mga0n895_18186_c1
621 nmdc:mga0n895_190801_c1
622 nmdc:mga0n895_2985_c1
623 nmdc:mga0n895_607_c1
624 nmdc:mga0n895_61144_c1
625 nmdc:mga0rr50_184755_c1
626 nmdc:mga0rr50_246653_c1
627 nmdc:mga0rr50_26322_c1
628 nmdc:mga0rr50_27801_c1
629 nmdc:mga0rr50_29247_c1
630 nmdc:mga0rr50_93940_c1
631 nmdc:mga08x19_103584_c1
632 nmdc:mga08x19_266031_c1
633 nmdc:mga08x19_2996_c1
634 nmdc:mga08x19_42981_c1
635 nmdc:mga08x19_59329_c1
636 nmdc:mga08x19_867_c1
637 nmdc:mga0a205_116692_c1
638 nmdc:mga0a205_19322_c1
639 nmdc:mga0a205_3815_c1
640 nmdc:mga0a205_699_c1
641 nmdc:mga0sz30_12201_c1
642 Ga0495601_0099480
643 Ga0495612_0035319
644 Ga0500555_000154
645 Ga0500556_0000410
646 Ga0500595_015234
647 Ga0500652_128789
648 Ga0500616_0001251
649 Ga0500637_0063937
650 2511182029
651 2513909391
652 2513925059
653 2535514373
654 2540606091
655 2556063058
656 2578336579
657 2580935393
658 2585201458
659 2599416633
660 2621274782
661 2644002814
662 2644104039
663 2644149415
664 2644208530
665 2644306912
666 2644337259
667 2644494881
668 2644540431
669 2644619151
670 2644652061
671 2712199202
672 2792623575
673 2792641264
674 2793297766
675 2793328618
676 2793336536
677 2793356297
678 2805932084
679 2809054294
680 2817479142
681 2838036742
682 2838662224
683 2838668858
684 2838701482
685 2842146453
686 2842194156
687 2842210617
688 2842251317
689 2842284223
690 2842288149
691 2842405415
692 2842411828
693 2842418645
694 2842490915
695 2848996851
696 2854915018
697 2855875549
698 2860838468
699 2881641221
700 2891376860
701 2906629571
702 2923561690
703 2933016946
704 2935636346
705 2941502547
706 2941512977
707 2941520721
708 2941528736
709 2962291825
710 2969137875
711 2969768346
712 2969771659
713 2971515789
714 2980181682
715 2980493650
716 2989352548
717 2996895461
718 3003935869
719 3006859469
720 3006880116
721 643822615
722 8005290181
723 8005384310
724 8005401493
725 8005543004
726 8022655040
727 8024501799
728 8056383691

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00248

Aldo_ket_red

Aldo/keto reductase family

15

310

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
1pz0-assembly1.cif.gz_A structure of nadph-dependent family 11 aldo-keto reductase akr11a(holo) 0.9236 6 322
1pz0-assembly1.cif.gz_A structure of nadph-dependent family 11 aldo-keto reductase akr11a(holo) 0.9122 6 322
3v0u-assembly1.cif.gz_A crystal structure of perakine reductase, founder member of a novel akr subfamily with unique conformational changes during nadph binding 0.9095 4 321
6ovx-assembly1.cif.gz_A crystal structure of mithramycin 3-side chain keto-reductase mtmw in complex with nad+, p422 form 0.8984 6 328
1pz1-assembly2.cif.gz_B structure of nadph-dependent family 11 aldo-keto reductase akr11b(holo) 0.8973 6 331
ID Description Score Start End Superfamily
af_Q2G0G6_3_309_3.20.20.100 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;NADP-dependent oxidoreductase domain 0.9506 6 322 3.20.20.100
af_Q2G0G6_3_309_3.20.20.100 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;NADP-dependent oxidoreductase domain 0.9446 6 322 3.20.20.100
af_A0A0R0ETH2_7_234_3.20.20.100 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;NADP-dependent oxidoreductase domain 0.9156 6 239 3.20.20.100
3v0uA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;NADP-dependent oxidoreductase domain 0.9095 4 321 3.20.20.100
af_F4HPY8_8_325_3.20.20.100 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;NADP-dependent oxidoreductase domain 0.9091 6 322 3.20.20.100
ID Description Score Start End GO Terms
AF-A0A7W5MFI9-F1-model_v4 deleted 0.9619 1 331
AF-A0A828ZIE1-F1-model_v4 deleted 0.9615 130 235
AF-A0A0T6ZXK7-F1-model_v4 Aldo/keto reductase 0.9605 8 331 GO:0005829
AF-A0A1V3R3T8-F1-model_v4 deleted 0.9586 1 331
AF-A0A0T6ZXK7-F1-model_v4 Aldo/keto reductase 0.9547 8 331 GO:0005829

Map