F422042

General Info

Members Datasets Scaffolds Average Seq Length
360 237 334 461

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2511231221|2512031949
Length 519
Sequence VSLDQQWARIRGRLKEEVGEIAYRSWLQPLSVASLVGGEVCIVVPTRFMRDWVLTHYADRIRALWSGENPEVQSIDVIVASTNPPAALVADNDDRDDDRAPPAPRSADSRLDPRGFESRPAPRPSRPSDAGSSAEPASYYGNGSQAHQAPSTVYTSASYGGASDESPNAVPAILEDRSDLSAALDPRFTFENFVVGKPNELAHAAARRVADATTVTFNPLFLYGGVGLGKTHLMHALAWQIRKNDPNRKVLYLSAEKFMYQFIRALRFKDTMAFKQQFRSVDVLMIDDVQFISGKDSTQEEFFHTFNALVDQNRQVIISADKSPSDLEGMEERLRSRLGWGLVADIHPTTYELRLGILQAKADALQASIPLKVLEFLAHKITSNVRELEGALNRIVAHAELVGRAITLETTQEVLHDLLRANDRRVTIDEIQKRVAEHYNIRVADMHSARRARAVARPRQIAMYLAKQLTARSLPEIGRKFGGRDHTTVMHAVKKVDELRATDPSFAEDVELLRRMLES

Samples

Sample ID Description Type Environment
1 2511231221 Azospirillum lipoferum 4B Isolate Rhizosphere
2 2522572158 Azospirillum halopraeferens DSM 3675 Isolate Unclassified
3 2524023250 Niveispirillum irakense DSM 11586 Isolate Unclassified
4 2597490356 Azospirillum brasilense sp7 Isolate Unclassified
5 2713897090 Paracoccus sphaerophysae HAMBI 3106 Isolate Nodule
6 2821443989 Inquilinus ginsengisoli 584 Isolate Unclassified
7 2834578030 Paracoccus thiocyanatus SST Isolate Unclassified
8 2836160341 Unclassified Planctomycetes Bin 134 Isolate Unclassified
9 2840878972 Albibacillus kandeliae J95 Isolate Rhizosphere
10 2842333319 Skermanella aerolata SEMIA 4010 Isolate Nodule
11 2844533157 Inquilinus sp. R-72501 v. 2 Isolate Unclassified
12 2846952575 Azospirillum brasilense sp7 Isolate Unclassified
13 2848858292 Azospirillum brasilense Az39 Isolate Unclassified
14 2854681122 Luteovulum sphaeroides SCJ Isolate Unclassified
15 2855020534 Paracoccus endophyticus SYSUP0003 Isolate Stem Tuber
16 2883291878 Hypericibacter terrae R5913 Isolate Rhizosphere
17 2883354860 Hypericibacter adhaerens R5959 Isolate Rhizosphere
18 2897803580 Azospirillum doebereinerae GSF71 Isolate Unclassified
19 2898795034 Rhodobacter sp. SGA-6-6 Isolate Rhizosphere
20 2899259804 Paracoccus aeridis JC501 Isolate Rhizosphere
21 2899275550 Paracoccus hibiscisoli CCTCC AB2016182 Isolate Rhizosphere
22 2919679072 Pseudotabrizicola sp. 4114 Isolate Unclassified
23 3000017691 Rhodobacteraceae bacterium GH2-2 Isolate Rhizosphere
24 3000405567 Rhodobacteraceae bacterium LNNU 3342 Isolate Rhizosphere
25 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
26 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
27 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
28 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
29 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
30 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
31 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
32 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
33 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
34 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
35 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
36 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
37 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
38 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
39 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
40 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
41 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
42 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
43 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
44 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
45 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
46 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
47 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
48 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
49 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
50 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
51 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
52 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
53 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
54 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
55 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
56 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
57 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
58 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
59 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
60 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
61 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
62 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
63 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
64 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
65 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
66 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
67 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
68 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
69 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
70 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
71 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
72 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
73 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
74 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
75 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
76 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
77 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
78 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
79 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
80 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
81 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
82 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
83 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
84 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
85 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
86 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
87 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
88 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
89 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
90 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
91 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
92 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
93 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
94 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
95 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
96 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
97 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
98 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
99 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
100 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
101 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
102 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
103 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
104 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
105 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
106 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
107 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
108 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
109 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
134 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
135 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
137 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
138 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
139 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
140 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
141 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
142 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
143 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
144 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
145 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
146 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
147 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
148 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
149 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
150 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
151 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
152 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
153 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
154 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
155 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
156 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
157 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
158 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
159 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
160 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
161 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
162 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
163 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
164 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
165 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
166 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
167 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
168 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
169 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
170 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
171 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
172 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
173 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
174 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
175 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
176 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
177 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
178 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
179 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
180 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
181 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
182 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
183 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
184 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
185 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
186 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
187 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
188 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
189 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
190 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
191 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
192 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
193 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
194 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
195 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
196 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
197 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
198 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
199 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
200 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
201 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
202 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
203 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
204 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
205 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
206 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
207 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
208 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
209 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
210 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
211 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
212 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
213 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
214 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
215 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
216 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
217 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
218 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
219 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
220 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
221 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
222 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
223 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
224 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
225 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
226 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
227 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
228 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
229 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
230 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
231 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
232 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
233 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
234 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
235 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
236 8054002106 Azospirillum lipoferum 59b Isolate Unclassified
237 8057132660 Paracoccus rhizosphaerae LMG 21293 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.78
Metatranscriptomes 0
Isolates 7.22

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.89
Nodule 0.56
Rhizoplane 0.83
Rhizosphere 76.11
Stem 0
Stem Tuber 0.28
Unclassified 13.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25151J46595_10000672 3300003187 Bacteria 28951
2 JGI25153J46596_10000054 3300003215 Bacteria 136806
3 JGI25160J50197_1005150 3300003354 Bacteria 5494
4 Ga0055536_1006233 3300003781 Bacteria 5623
5 Ga0065712_10008517 3300005290 Bacteria 2415
6 Ga0065715_10014199 3300005293 Bacteria 2676
7 Ga0070683_100212427 3300005329 Bacteria 1838
8 Ga0070670_100008313 3300005331 Bacteria 8843
9 Ga0068869_100075747 3300005334 Bacteria 2500
10 Ga0070666_10027378 3300005335 Bacteria 3733
11 Ga0070680_100015408 3300005336 Bacteria 5993
12 Ga0070661_100018887 3300005344 Bacteria 4908
13 Ga0070692_10086858 3300005345 Unclassified 1694
14 Ga0070671_100107979 3300005355 Unclassified 2337
15 Ga0070671_100167742 3300005355 Bacteria 1856
16 Ga0070674_100015238 3300005356 Bacteria 4796
17 Ga0070673_100054639 3300005364 Bacteria 3142
18 Ga0070709_10018103 3300005434 Bacteria 4051
19 Ga0070714_100000391 3300005435 Bacteria 32619
20 Ga0070714_100036583 3300005435 Bacteria 4118
21 Ga0070714_100116071 3300005435 Bacteria 2376
22 Ga0070714_100178231 3300005435 Bacteria 1932
23 Ga0070713_100103512 3300005436 Bacteria 2470
24 Ga0070713_100108106 3300005436 Bacteria 2421
25 Ga0070710_10011041 3300005437 Bacteria 4452
26 Ga0070711_100153358 3300005439 Bacteria 1739
27 Ga0070705_100032790 3300005440 Bacteria 2889
28 Ga0070705_100092538 3300005440 Bacteria 1888
29 Ga0070694_100027315 3300005444 Bacteria 3705
30 Ga0070663_100003195 3300005455 Bacteria 9408
31 Ga0070678_100016138 3300005456 Bacteria 4767
32 Ga0070681_10000975 3300005458 Bacteria 24199
33 Ga0070681_10003722 3300005458 Bacteria 14312
34 Ga0070681_10042259 3300005458 Bacteria 4568
35 Ga0068867_100009220 3300005459 Bacteria 6967
36 Ga0070706_100038946 3300005467 Bacteria 4387
37 Ga0070706_100068654 3300005467 Bacteria 3278
38 Ga0070707_100026405 3300005468 Bacteria 5513
39 Ga0070698_100001199 3300005471 Bacteria 28742
40 Ga0070698_100220602 3300005471 Bacteria 1830
41 Ga0070699_100028407 3300005518 Bacteria 4824
42 Ga0070679_100002977 3300005530 Bacteria 15456
43 Ga0070679_100025787 3300005530 Bacteria 5769
44 Ga0070679_100045397 3300005530 Bacteria 4378
45 Ga0070684_100055471 3300005535 Bacteria 3455
46 Ga0070697_100133369 3300005536 Bacteria 2084
47 Ga0068853_100021159 3300005539 Bacteria 5417
48 Ga0070672_100013237 3300005543 Bacteria 5818
49 Ga0070686_100005316 3300005544 Bacteria 7121
50 Ga0070695_100020607 3300005545 Bacteria 4026
51 Ga0070696_100033807 3300005546 Bacteria 3515
52 Ga0070693_100067888 3300005547 Bacteria 2091
53 Ga0070665_100005173 3300005548 Bacteria 13498
54 Ga0068855_100050723 3300005563 Bacteria 4889
55 Ga0068855_100051551 3300005563 Bacteria 4848
56 Ga0068857_100106978 3300005577 Bacteria 2512
57 Ga0068861_100111660 3300005719 Bacteria 2191
58 Ga0068862_100018087 3300005844 Bacteria 5870
59 Ga0081455_10029194 3300005937 Bacteria 5030
60 Ga0081455_10126287 3300005937 Bacteria 2007
61 Ga0081538_10002289 3300005981 Bacteria 18916
62 Ga0081540_1016254 3300005983 Bacteria 4666
63 Ga0070717_10000864 3300006028 Bacteria 20037
64 Ga0070717_10136983 3300006028 Bacteria 2109
65 Ga0070712_100045421 3300006175 Bacteria 3033
66 Ga0075366_10007227 3300006195 Bacteria 6119
67 Ga0097621_100217766 3300006237 Bacteria 1663
68 Ga0075433_10017236 3300006852 Bacteria 5977
69 Ga0075433_10133132 3300006852 Bacteria 2209
70 Ga0075434_100039508 3300006871 Bacteria 4676
71 Ga0068865_100064841 3300006881 Bacteria 2571
72 Ga0099795_10002309 3300007788 Bacteria 4450
73 Ga0105240_10034511 3300009093 Bacteria 6524
74 Ga0105240_10101538 3300009093 Bacteria 3498
75 Ga0105240_10107686 3300009093 Bacteria 3379
76 Ga0111539_10012197 3300009094 Bacteria 10780
77 Ga0111539_10229809 3300009094 Bacteria 2160
78 Ga0111539_10433205 3300009094 Bacteria 1531
79 Ga0114129_10166655 3300009147 Bacteria 3006
80 Ga0105241_10047751 3300009174 Bacteria 3256
81 Ga0105242_10030396 3300009176 Bacteria 4313
82 Ga0105248_10149801 3300009177 Bacteria 2632
83 Ga0105237_10091752 3300009545 Bacteria 3027
84 Ga0105238_10001468 3300009551 Bacteria 23685
85 Ga0105238_10025948 3300009551 Bacteria 5973
86 Ga0105249_10144013 3300009553 Bacteria 2288
87 Ga0105239_10026496 3300010375 Bacteria 6379
88 Ga0157370_10007018 3300013104 Bacteria 12300
89 Ga0157370_10136515 3300013104 Bacteria 2286
90 Ga0157374_10152550 3300013296 Bacteria 2247
91 Ga0157372_10033067 3300013307 Bacteria 5677
92 Ga0157372_10044741 3300013307 Bacteria 4907
93 Ga0182008_10038903 3300014497 Bacteria 2378
94 Ga0157377_10024232 3300014745 Bacteria 3224
95 Ga0157376_10022559 3300014969 Bacteria 4910
96 Ga0213872_10000285 3300021361 Bacteria 43243
97 Ga0213872_10000422 3300021361 Bacteria 34673
98 Ga0213872_10000461 3300021361 Bacteria 33198
99 Ga0213872_10002920 3300021361 Bacteria 9706
100 Ga0213872_10053499 3300021361 Bacteria 1831
101 Ga0213875_10000509 3300021388 Bacteria 32555
102 Ga0213875_10001077 3300021388 Bacteria 19082
103 Ga0213875_10001222 3300021388 Bacteria 17398
104 Ga0213875_10018589 3300021388 Bacteria 3349
105 Ga0213875_10023015 3300021388 Bacteria 2979
106 Ga0213875_10071068 3300021388 Bacteria 1625
107 Ga0209148_1000437 3300025254 Bacteria 45737
108 Ga0209455_1001264 3300025272 Bacteria 11858
109 Ga0209130_1001605 3300025284 Bacteria 14074
110 Ga0209676_1000049 3300025292 Bacteria 403210
111 Ga0209025_1000636 3300025294 Bacteria 62083
112 Ga0209758_1000048 3300025297 Bacteria 358400
113 Ga0209758_1017023 3300025297 Bacteria 3650
114 Ga0209050_1006594 3300025298 Bacteria 6816
115 Ga0207426_1000088 3300025302 Bacteria 287526
116 Ga0209051_1018529 3300025303 Bacteria 3076
117 Ga0209257_1000562 3300025304 Bacteria 63202
118 Ga0207697_10006512 3300025315 Bacteria 5278
119 Ga0207645_10001329 3300025907 Bacteria 20324
120 Ga0207707_10003461 3300025912 Bacteria 13985
121 Ga0207707_10166995 3300025912 Bacteria 1923
122 Ga0207695_10077268 3300025913 Bacteria 3382
123 Ga0207695_10092300 3300025913 Bacteria 3038
124 Ga0207695_10094983 3300025913 Bacteria 2987
125 Ga0207695_10118590 3300025913 Bacteria 2617
126 Ga0207671_10141127 3300025914 Bacteria 1856
127 Ga0207693_10002175 3300025915 Bacteria 17088
128 Ga0207663_10047405 3300025916 Bacteria 2653
129 Ga0207660_10016538 3300025917 Bacteria 4884
130 Ga0207660_10024671 3300025917 Bacteria 4073
131 Ga0207657_10018859 3300025919 Bacteria 6569
132 Ga0207652_10007991 3300025921 Bacteria 8490
133 Ga0207652_10023760 3300025921 Bacteria 5081
134 Ga0207652_10072282 3300025921 Bacteria 2999
135 Ga0207646_10052030 3300025922 Bacteria 3664
136 Ga0207694_10000494 3300025924 Bacteria 35746
137 Ga0207650_10000306 3300025925 Bacteria 48372
138 Ga0207664_10004216 3300025929 Bacteria 9713
139 Ga0207664_10020525 3300025929 Bacteria 4898
140 Ga0207706_10014194 3300025933 Bacteria 7221
141 Ga0207665_10009502 3300025939 Bacteria 6386
142 Ga0207691_10024439 3300025940 Bacteria 5683
143 Ga0207661_10192427 3300025944 Bacteria 1789
144 Ga0207679_10003045 3300025945 Bacteria 10376
145 Ga0207667_10044430 3300025949 Bacteria 4707
146 Ga0207703_10116540 3300026035 Bacteria 2287
147 Ga0207639_10064035 3300026041 Bacteria 2849
148 Ga0207678_10005517 3300026067 Bacteria 11305
149 Ga0207674_10031835 3300026116 Bacteria 5536
150 Ga0207675_100100899 3300026118 Bacteria 2719
151 Ga0207428_10006811 3300027907 Bacteria 10480
152 Ga0268266_10003139 3300028379 Bacteria 16791
153 Ga0265338_10054969 3300028800 Bacteria 3545
154 Ga0265324_10002894 3300029957 Bacteria 8430
155 Ga0265328_10007080 3300031239 Bacteria 4699
156 Ga0265328_10011717 3300031239 Bacteria 3499
157 Ga0265320_10001416 3300031240 Bacteria 17431
158 Ga0265331_10000657 3300031250 Bacteria 29926
159 Ga0265331_10003753 3300031250 Bacteria 9651
160 Ga0265331_10006537 3300031250 Bacteria 6878
161 Ga0265327_10000553 3300031251 Bacteria 64026
162 Ga0265327_10004521 3300031251 Bacteria 12273
163 Ga0265327_10006327 3300031251 Bacteria 9509
164 Ga0265316_10103721 3300031344 Bacteria 2159
165 Ga0307513_10172836 3300031456 Bacteria 2036
166 Ga0307408_100018313 3300031548 Bacteria 4700
167 Ga0265313_10002864 3300031595 Bacteria 14481
168 Ga0265313_10003659 3300031595 Bacteria 12300
169 Ga0265313_10007622 3300031595 Bacteria 7346
170 Ga0307508_10134758 3300031616 Bacteria 2073
171 Ga0265314_10025050 3300031711 Bacteria 4509
172 Ga0265314_10033963 3300031711 Bacteria 3732
173 Ga0265342_10031355 3300031712 Bacteria 3286
174 Ga0316576_10028181 3300031727 Bacteria 3956
175 Ga0307406_10058522 3300031901 Bacteria 2477
176 Ga0307407_10043188 3300031903 Bacteria 2533
177 Ga0307407_10077845 3300031903 Bacteria 1996
178 Ga0373954_0001037 3300035118 Bacteria 11033
179 Ga0373955_0027777 3300035172 Bacteria 2929
180 Ga0373961_0018469 3300035241 Bacteria 1822
181 Ga0373935_0035098 3300035692 Bacteria 3129
182 Ga0373927_0012481 3300035695 Bacteria 5658
183 Ga0373927_0036677 3300035695 Bacteria 3188
184 Ga0373937_0021227 3300036401 Bacteria 5827
185 Ga0373937_0063763 3300036401 Bacteria 3389
186 Ga0373925_0091404 3300037068 Bacteria 2327
187 Ga0395899_0006769 3300037312 Bacteria 8879
188 Ga0395899_0026221 3300037312 Bacteria 4398
189 Ga0395900_0028256 3300037418 Bacteria 5746
190 Ga0395900_0104503 3300037418 Bacteria 2910
191 Ga0395898_0011387 3300037466 Bacteria 9236
192 Ga0395898_0031412 3300037466 Bacteria 5306
193 Ga0395898_0134954 3300037466 Bacteria 2363
194 Ga0436364_0266134 3300037853 Bacteria 37308
195 Ga0436364_0356416 3300037853 Bacteria 3669
196 Ga0436364_0596708 3300037853 Bacteria 2535
197 Ga0436364_0598026 3300037853 Bacteria 33441
198 Ga0436364_0601668 3300037853 Bacteria 4765
199 Ga0395901_0027473 3300038443 Bacteria 5847
200 Ga0395901_0075270 3300038443 Bacteria 3522
201 Ga0395901_0102837 3300038443 Bacteria 2998
202 Ga0237819_00303 3300038705 Bacteria 18154
203 Ga0400483_022671 3300039062 Bacteria 2744
204 Ga0400483_027420 3300039062 Bacteria 2759
205 Ga0400483_030014 3300039062 Bacteria 5386
206 Ga0400483_030976 3300039062 Bacteria 10375
207 Ga0400483_108758 3300039062 Bacteria 4723
208 Ga0400483_120856 3300039062 Bacteria 19505
209 Ga0400483_128277 3300039062 Bacteria 37786
210 Ga0400483_147462 3300039062 Bacteria 8185
211 Ga0400483_150830 3300039062 Bacteria 5772
212 Ga0400483_202987 3300039062 Bacteria 2238
213 Ga0436365_0000981 3300039437 Bacteria 2618
214 Ga0436365_0221100 3300039437 Bacteria 5784
215 Ga0436365_1013130 3300039437 Bacteria 4489
216 Ga0436365_1184163 3300039437 Bacteria 2388
217 Ga0436365_1541194 3300039437 Bacteria 2762
218 Ga0436360_0072285 3300039438 Bacteria 4371
219 Ga0436360_0622281 3300039438 Bacteria 3288
220 Ga0436360_1065945 3300039438 Bacteria 7672
221 Ga0436360_1126133 3300039438 Bacteria 3689
222 Ga0436361_0062779 3300039447 Bacteria 24580
223 Ga0436361_0230098 3300039447 Bacteria 2392
224 Ga0436361_0255274 3300039447 Bacteria 1858
225 Ga0436361_0286295 3300039447 Bacteria 4458
226 Ga0436361_0520341 3300039447 Bacteria 2296
227 Ga0436361_0549845 3300039447 Bacteria 2455
228 Ga0436361_0656423 3300039447 Bacteria 7056
229 Ga0436361_0694695 3300039447 Bacteria 38381
230 Ga0436361_1104026 3300039447 Bacteria 2295
231 Ga0436361_1132019 3300039447 Bacteria 4090
232 Ga0436361_1206774 3300039447 Bacteria 11532
233 Ga0436363_0085120 3300039450 Bacteria 3315
234 Ga0436363_1261707 3300039450 Bacteria 4636
235 Ga0436362_0208353 3300039453 Bacteria 2924
236 Ga0436362_0360900 3300039453 Bacteria 8435
237 Ga0436362_0764586 3300039453 Bacteria 2481
238 Ga0436362_1022129 3300039453 Bacteria 2393
239 Ga0451577_0066156 3300042876 Bacteria 3224
240 Ga0453684_0000048 3300044712 Bacteria 559743
241 Ga0453684_0000072 3300044712 Bacteria 442457
242 Ga0453684_0000077 3300044712 Bacteria 435536
243 Ga0453684_0022066 3300044712 Bacteria 9469
244 Ga0453684_0025257 3300044712 Bacteria 8634
245 Ga0451576_0000478 3300045051 Bacteria 89734
246 Ga0451576_0000922 3300045051 Bacteria 55478
247 Ga0451576_0002130 3300045051 Bacteria 30724
248 Ga0451576_0280709 3300045051 Bacteria 1741
249 Ga0466958_0000152 3300045836 Bacteria 24247
250 Ga0466967_0063056 3300045976 Bacteria 3292
251 Ga0466967_0086435 3300045976 Bacteria 2841
252 Ga0495592_0050694 3300046454 Bacteria 3084
253 Ga0495580_0055143 3300046472 Bacteria 2801
254 Ga0495610_0039803 3300046512 Bacteria 2374
255 Ga0495586_0046580 3300046535 Bacteria 2338
256 Ga0495667_0041436 3300046559 Bacteria 3054
257 Ga0496102_0023737 3300048905 Bacteria 5450
258 Ga0496102_0059845 3300048905 Bacteria 3484
259 Ga0496112_0074497 3300048915 Bacteria 3356
260 Ga0496116_0000092 3300048919 Bacteria 206620
261 Ga0496117_0005156 3300048920 Bacteria 13942
262 Ga0496118_0025529 3300048921 Bacteria 5062
263 Ga0496124_0041065 3300048927 Bacteria 3996
264 Ga0501031_0058439 3300049568 Bacteria 2513
265 Ga0501032_0024851 3300049569 Bacteria 4133
266 Ga0501032_0028784 3300049569 Bacteria 3815
267 Ga0501033_0004812 3300049570 Bacteria 10785
268 Ga0501033_0063491 3300049570 Bacteria 2718
269 Ga0501034_0126618 3300049571 Bacteria 2539
270 Ga0501036_0008831 3300049572 Bacteria 8273
271 Ga0501037_0012884 3300049573 Bacteria 6163
272 Ga0501038_0001056 3300049574 Bacteria 24828
273 Ga0501039_0002213 3300049575 Bacteria 14381
274 Ga0501042_0074657 3300049578 Bacteria 2427
275 Ga0501043_0073019 3300049579 Bacteria 2695
276 Ga0501046_0023888 3300049580 Bacteria 5021
277 Ga0501047_0010500 3300049581 Bacteria 8762
278 Ga0501047_0022030 3300049581 Bacteria 6120
279 Ga0501047_0055867 3300049581 Bacteria 3817
280 Ga0501047_0109225 3300049581 Bacteria 2649
281 Ga0501047_0225026 3300049581 Bacteria 1731
282 Ga0501067_0027185 3300049583 Bacteria 3169
283 Ga0501068_0096058 3300049584 Bacteria 1833
284 Ga0501070_0015621 3300049586 Bacteria 6383
285 Ga0501070_0019463 3300049586 Bacteria 5694
286 Ga0501070_0045493 3300049586 Bacteria 3650
287 Ga0501073_0000989 3300049589 Bacteria 20525
288 Ga0501073_0023437 3300049589 Bacteria 4432
289 Ga0501074_0006628 3300049590 Bacteria 8372
290 Ga0501074_0086223 3300049590 Bacteria 2250
291 Ga0501075_0121015 3300049591 Bacteria 1992
292 Ga0501076_0006451 3300049592 Bacteria 8513
293 Ga0501076_0205166 3300049592 Bacteria 1610
294 Ga0501079_0007901 3300049741 Bacteria 8062
295 Ga0501079_0030189 3300049741 Bacteria 4165
296 Ga0501080_0001730 3300049742 Bacteria 18676
297 Ga0501080_0044935 3300049742 Bacteria 4111
298 Ga0501080_0170193 3300049742 Bacteria 2009
299 Ga0501080_0276422 3300049742 Bacteria 1528
300 Ga0501081_0020116 3300049743 Bacteria 4449
301 Ga0501083_0012008 3300049744 Bacteria 6067
302 Ga0501083_0031345 3300049744 Bacteria 3649
303 Ga0501035_0017560 3300049822 Bacteria 6602
304 Ga0501044_0013707 3300049823 Bacteria 8761
305 Ga0501044_0032170 3300049823 Bacteria 5514
306 nmdc:mga05p37_180522_c1 3300050507 Bacteria 2568
307 nmdc:mga08y16_179876_c1 3300050511 Bacteria 2196
308 nmdc:mga08y16_811_c1 3300050511 Bacteria 29902
309 nmdc:mga0n895_36953_c1 3300050512 Bacteria 4720
310 nmdc:mga0rr50_5779_c1 3300050513 Bacteria 7427
311 nmdc:mga0a205_222004_c1 3300050515 Bacteria 1775
312 Ga0495601_0005144 3300053077 Bacteria 7603
313 Ga0495595_0014531 3300053084 Bacteria 3343
314 Ga0495619_0058368 3300053085 Bacteria 2561
315 Ga0500643_001414 3300053087 Bacteria 13869
316 Ga0500643_002547 3300053087 Bacteria 9301
317 Ga0500651_0003808 3300053093 Bacteria 8330
318 Ga0500641_0000234 3300053096 Bacteria 20827
319 Ga0500650_0053986 3300053098 Bacteria 1870
320 Ga0500595_000493 3300053119 Bacteria 24059
321 Ga0500595_003503 3300053119 Bacteria 7305
322 Ga0500618_003039 3300053125 Bacteria 5961
323 Ga0500642_0007418 3300053130 Bacteria 3683
324 Ga0500652_011990 3300053131 Bacteria 3025
325 Ga0500658_0009435 3300053134 Bacteria 3600
326 Ga0500658_0029124 3300053134 Bacteria 2146
327 Ga0500568_0007785 3300053139 Bacteria 5220
328 Ga0500577_0047732 3300053142 Bacteria 1593
329 Ga0500588_0000549 3300053146 Bacteria 6121
330 Ga0500616_0000806 3300053153 Bacteria 35829
331 Ga0501084_0085256 3300054114 Bacteria 2652
332 Ga0501082_0002664 3300060353 Bacteria 15601
333 Ga0501082_0032450 3300060353 Bacteria 4504
334 Ga0530510_0067137 3300061734 Bacteria 2601

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300013296 Ga0157374_10152550 Ga0157374_101525502 353
2 3300005937 Ga0081455_10029194 Ga0081455_100291942 381
3 3300045976 Ga0466967_0063056 Ga0466967_0063056_1263_2651 390
4 3300021361 Ga0213872_10000422 Ga0213872_1000042233 399
5 3300049581 Ga0501047_0109225 Ga0501047_0109225_257_1558 403
6 3300035695 Ga0373927_0012481 Ga0373927_0012481_1639_2955 404
7 3300031595 Ga0265313_10007622 Ga0265313_100076223 405
8 3300005983 Ga0081540_1016254 Ga0081540_10162542 410
9 iso_pu_bacteria 2897803580 2897808883 412
10 3300025913 Ga0207695_10118590 Ga0207695_101185903 413
11 3300037418 Ga0395900_0104503 Ga0395900_0104503_40_1449 413
12 3300038443 Ga0395901_0102837 Ga0395901_0102837_1509_2918 413
13 3300036401 Ga0373937_0021227 Ga0373937_0021227_2117_3472 415
14 3300037466 Ga0395898_0011387 Ga0395898_0011387_564_1895 415
15 3300045836 Ga0466958_0000152 Ga0466958_0000152_13611_14951 415
16 3300049584 Ga0501068_0096058 Ga0501068_0096058_397_1719 415
17 3300049592 Ga0501076_0205166 Ga0501076_0205166_196_1542 415
18 3300049742 Ga0501080_0276422 Ga0501080_0276422_30_1403 415
19 3300005290 Ga0065712_10008517 Ga0065712_100085172 416
20 3300005293 Ga0065715_10014199 Ga0065715_100141992 416
21 3300005329 Ga0070683_100212427 Ga0070683_1002124272 416
22 3300005331 Ga0070670_100008313 Ga0070670_1000083135 416
23 3300005334 Ga0068869_100075747 Ga0068869_1000757472 416
24 3300005335 Ga0070666_10027378 Ga0070666_100273782 416
25 3300005344 Ga0070661_100018887 Ga0070661_1000188875 416
26 3300005345 Ga0070692_10086858 Ga0070692_100868581 416
27 3300005355 Ga0070671_100107979 Ga0070671_1001079792 416
28 3300005356 Ga0070674_100015238 Ga0070674_1000152382 416
29 3300005364 Ga0070673_100054639 Ga0070673_1000546393 416
30 3300005440 Ga0070705_100092538 Ga0070705_1000925381 416
31 3300005455 Ga0070663_100003195 Ga0070663_10000319511 416
32 3300005456 Ga0070678_100016138 Ga0070678_1000161382 416
33 3300005458 Ga0070681_10042259 Ga0070681_100422592 416
34 3300005459 Ga0068867_100009220 Ga0068867_1000092202 416
35 3300005530 Ga0070679_100045397 Ga0070679_1000453973 416
36 3300005539 Ga0068853_100021159 Ga0068853_1000211594 416
37 3300005543 Ga0070672_100013237 Ga0070672_1000132372 416
38 3300005544 Ga0070686_100005316 Ga0070686_1000053165 416
39 3300005545 Ga0070695_100020607 Ga0070695_1000206074 416
40 3300005547 Ga0070693_100067888 Ga0070693_1000678881 416
41 3300005548 Ga0070665_100005173 Ga0070665_1000051733 416
42 3300005719 Ga0068861_100111660 Ga0068861_1001116602 416
43 3300006237 Ga0097621_100217766 Ga0097621_1002177662 416
44 3300009093 Ga0105240_10101538 Ga0105240_101015382 416
45 3300009174 Ga0105241_10047751 Ga0105241_100477513 416
46 3300009176 Ga0105242_10030396 Ga0105242_100303963 416
47 3300009177 Ga0105248_10149801 Ga0105248_101498012 416
48 3300009551 Ga0105238_10001468 Ga0105238_1000146815 416
49 3300009553 Ga0105249_10144013 Ga0105249_101440133 416
50 3300013307 Ga0157372_10033067 Ga0157372_100330676 416
51 3300014745 Ga0157377_10024232 Ga0157377_100242322 416
52 3300014969 Ga0157376_10022559 Ga0157376_100225593 416
53 3300025315 Ga0207697_10006512 Ga0207697_100065122 416
54 3300025907 Ga0207645_10001329 Ga0207645_100013292 416
55 3300025917 Ga0207660_10016538 Ga0207660_100165384 416
56 3300025919 Ga0207657_10018859 Ga0207657_100188592 416
57 3300025921 Ga0207652_10072282 Ga0207652_100722822 416
58 3300025924 Ga0207694_10000494 Ga0207694_1000049415 416
59 3300025925 Ga0207650_10000306 Ga0207650_1000030625 416
60 3300025933 Ga0207706_10014194 Ga0207706_100141942 416
61 3300025940 Ga0207691_10024439 Ga0207691_100244392 416
62 3300025945 Ga0207679_10003045 Ga0207679_100030453 416
63 3300026035 Ga0207703_10116540 Ga0207703_101165403 416
64 3300026041 Ga0207639_10064035 Ga0207639_100640353 416
65 3300026067 Ga0207678_10005517 Ga0207678_100055172 416
66 3300028379 Ga0268266_10003139 Ga0268266_1000313912 416
67 3300045051 Ga0451576_0280709 Ga0451576_0280709_347_1681 416
68 3300048905 Ga0496102_0059845 Ga0496102_0059845_1731_3065 416
69 3300048915 Ga0496112_0074497 Ga0496112_0074497_1964_3298 416
70 3300006852 Ga0075433_10017236 Ga0075433_100172363 417
71 3300009094 Ga0111539_10229809 Ga0111539_102298091 417
72 3300039062 Ga0400483_022671 Ga0400483_022671_243_1592 417
73 3300046454 Ga0495592_0050694 Ga0495592_0050694_392_1789 417
74 3300046535 Ga0495586_0046580 Ga0495586_0046580_928_2325 417
75 3300046559 Ga0495667_0041436 Ga0495667_0041436_1539_2936 417
76 3300050511 nmdc:mga08y16_179876_c1 nmdc:mga08y16_179876_c1_54_1391 417
77 3300050513 nmdc:mga0rr50_5779_c1 nmdc:mga0rr50_5779_c1_168_1505 417
78 3300053077 Ga0495601_0005144 Ga0495601_0005144_3734_5131 417
79 3300053084 Ga0495595_0014531 Ga0495595_0014531_57_1454 417
80 3300009094 Ga0111539_10433205 Ga0111539_104332051 418
81 3300037853 Ga0436364_0596708 Ga0436364_0596708_1009_2361 418
82 iso_pu_bacteria 2713897090 2715500444 418
83 iso_pu_bacteria 2855020534 2855023050 418
84 3300029957 Ga0265324_10002894 Ga0265324_1000289412 419
85 3300031239 Ga0265328_10011717 Ga0265328_100117174 419
86 3300031240 Ga0265320_10001416 Ga0265320_100014166 419
87 3300031250 Ga0265331_10000657 Ga0265331_100006571 419
88 3300031251 Ga0265327_10004521 Ga0265327_100045214 419
89 3300031595 Ga0265313_10003659 Ga0265313_1000365912 419
90 3300039062 Ga0400483_030976 Ga0400483_030976_6657_8090 419
91 3300039062 Ga0400483_128277 Ga0400483_128277_3325_4758 419
92 3300044712 Ga0453684_0000072 Ga0453684_0000072_327549_328910 419
93 iso_pu_bacteria 2899259804 2899262817 419
94 3300053119 Ga0500595_003503 Ga0500595_003503_3005_4489 420
95 iso_pu_bacteria 2834578030 2834578535 420
96 iso_pu_bacteria 2898795034 2898795508 420
97 iso_pu_bacteria 2899275550 2899276916 420
98 iso_pu_bacteria 2919679072 2919682756 420
99 iso_pu_bacteria 3000405567 3000408164 420
100 iso_pu_bacteria 8057132660 8057135141 420
101 3300010375 Ga0105239_10026496 Ga0105239_100264964 421
102 3300037312 Ga0395899_0026221 Ga0395899_0026221_1988_3382 421
103 3300039062 Ga0400483_120856 Ga0400483_120856_2047_3471 421
104 3300039062 Ga0400483_147462 Ga0400483_147462_4293_5717 421
105 3300039453 Ga0436362_0208353 Ga0436362_0208353_793_2181 421
106 3300039453 Ga0436362_1022129 Ga0436362_1022129_701_2161 421
107 3300044712 Ga0453684_0022066 Ga0453684_0022066_980_2386 421
108 3300021388 Ga0213875_10000509 Ga0213875_1000050911 422
109 3300037853 Ga0436364_0598026 Ga0436364_0598026_18542_19912 422
110 3300045051 Ga0451576_0000922 Ga0451576_0000922_6507_7913 422
111 iso_pu_bacteria 2854681122 2854684330 422
112 3300031727 Ga0316576_10028181 Ga0316576_100281812 423
113 3300039062 Ga0400483_030014 Ga0400483_030014_2552_3958 423
114 3300045051 Ga0451576_0002130 Ga0451576_0002130_12281_13645 423
115 iso_pu_bacteria 2840878972 2840882079 423
116 3300045976 Ga0466967_0086435 Ga0466967_0086435_1128_2570 424
117 iso_pu_bacteria 2836160341 2836162207 424
118 3300005563 Ga0068855_100050723 Ga0068855_1000507232 425
119 3300009093 Ga0105240_10034511 Ga0105240_100345114 425
120 3300025913 Ga0207695_10094983 Ga0207695_100949834 425
121 3300025949 Ga0207667_10044430 Ga0207667_100444302 425
122 3300039062 Ga0400483_027420 Ga0400483_027420_1347_2705 425
123 3300049591 Ga0501075_0121015 Ga0501075_0121015_319_1692 425
124 iso_pu_bacteria 2883291878 2883291878 425
125 iso_pu_bacteria 2883354860 2883354860 425
126 3300021388 Ga0213875_10023015 Ga0213875_100230153 426
127 3300037853 Ga0436364_0356416 Ga0436364_0356416_309_1790 426
128 3300049743 Ga0501081_0020116 Ga0501081_0020116_2533_3909 426
129 3300014497 Ga0182008_10038903 Ga0182008_100389032 427
130 3300031616 Ga0307508_10134758 Ga0307508_101347582 427
131 3300049569 Ga0501032_0024851 Ga0501032_0024851_226_1641 427
132 3300049579 Ga0501043_0073019 Ga0501043_0073019_78_1484 427
133 3300049580 Ga0501046_0023888 Ga0501046_0023888_2356_3771 427
134 3300049581 Ga0501047_0010500 Ga0501047_0010500_2743_4158 427
135 3300049742 Ga0501080_0170193 Ga0501080_0170193_331_1746 427
136 3300049744 Ga0501083_0031345 Ga0501083_0031345_807_2222 427
137 3300049823 Ga0501044_0013707 Ga0501044_0013707_3550_4965 427
138 3300053096 Ga0500641_0000234 Ga0500641_0000234_11908_13329 427
139 3300053098 Ga0500650_0053986 Ga0500650_0053986_39_1454 427
140 3300053153 Ga0500616_0000806 Ga0500616_0000806_3980_5401 427
141 3300054114 Ga0501084_0085256 Ga0501084_0085256_281_1696 427
142 iso_pu_bacteria 3000017691 3000019915 427
143 3300005563 Ga0068855_100051551 Ga0068855_1000515512 428
144 3300021361 Ga0213872_10053499 Ga0213872_100534991 428
145 3300025944 Ga0207661_10192427 Ga0207661_101924272 428
146 3300037312 Ga0395899_0006769 Ga0395899_0006769_3750_5129 428
147 3300037466 Ga0395898_0031412 Ga0395898_0031412_2654_4033 428
148 3300038443 Ga0395901_0027473 Ga0395901_0027473_143_1522 428
149 3300039437 Ga0436365_1013130 Ga0436365_1013130_2002_3441 428
150 3300039437 Ga0436365_1184163 Ga0436365_1184163_306_1706 428
151 3300039447 Ga0436361_0286295 Ga0436361_0286295_2788_4275 428
152 3300039450 Ga0436363_0085120 Ga0436363_0085120_744_2144 428
153 3300005336 Ga0070680_100015408 Ga0070680_1000154085 429
154 3300005435 Ga0070714_100036583 Ga0070714_1000365833 429
155 3300005458 Ga0070681_10003722 Ga0070681_100037227 429
156 3300005530 Ga0070679_100002977 Ga0070679_1000029777 429
157 3300005530 Ga0070679_100025787 Ga0070679_1000257877 429
158 3300005577 Ga0068857_100106978 Ga0068857_1001069783 429
159 3300009093 Ga0105240_10107686 Ga0105240_101076862 429
160 3300013104 Ga0157370_10007018 Ga0157370_100070187 429
161 3300013104 Ga0157370_10136515 Ga0157370_101365151 429
162 3300013307 Ga0157372_10044741 Ga0157372_100447413 429
163 3300025912 Ga0207707_10003461 Ga0207707_100034619 429
164 3300025913 Ga0207695_10077268 Ga0207695_100772682 429
165 3300025917 Ga0207660_10024671 Ga0207660_100246711 429
166 3300025921 Ga0207652_10007991 Ga0207652_100079913 429
167 3300025921 Ga0207652_10023760 Ga0207652_100237603 429
168 3300026116 Ga0207674_10031835 Ga0207674_100318357 429
169 3300037466 Ga0395898_0134954 Ga0395898_0134954_429_1883 429
170 3300038443 Ga0395901_0075270 Ga0395901_0075270_555_2009 429
171 3300039437 Ga0436365_0000981 Ga0436365_0000981_66_1535 429
172 3300039447 Ga0436361_0656423 Ga0436361_0656423_2730_4256 429
173 3300049568 Ga0501031_0058439 Ga0501031_0058439_809_2227 429
174 3300049569 Ga0501032_0028784 Ga0501032_0028784_783_2201 429
175 3300049570 Ga0501033_0004812 Ga0501033_0004812_7797_9215 429
176 3300049572 Ga0501036_0008831 Ga0501036_0008831_2779_4197 429
177 3300049573 Ga0501037_0012884 Ga0501037_0012884_1615_3033 429
178 3300049574 Ga0501038_0001056 Ga0501038_0001056_19840_21258 429
179 3300049575 Ga0501039_0002213 Ga0501039_0002213_8553_9971 429
180 3300049581 Ga0501047_0055867 Ga0501047_0055867_703_2121 429
181 3300049583 Ga0501067_0027185 Ga0501067_0027185_1279_2697 429
182 3300049586 Ga0501070_0015621 Ga0501070_0015621_627_2042 429
183 3300049586 Ga0501070_0045493 Ga0501070_0045493_135_1553 429
184 3300049589 Ga0501073_0000989 Ga0501073_0000989_14129_15547 429
185 3300049590 Ga0501074_0006628 Ga0501074_0006628_4858_6276 429
186 3300049741 Ga0501079_0030189 Ga0501079_0030189_1770_3188 429
187 3300049742 Ga0501080_0001730 Ga0501080_0001730_15132_16550 429
188 3300049742 Ga0501080_0044935 Ga0501080_0044935_2109_3497 429
189 3300049744 Ga0501083_0012008 Ga0501083_0012008_1595_2983 429
190 3300049822 Ga0501035_0017560 Ga0501035_0017560_206_1624 429
191 3300049823 Ga0501044_0032170 Ga0501044_0032170_1999_3417 429
192 3300060353 Ga0501082_0002664 Ga0501082_0002664_4979_6397 429
193 3300060353 Ga0501082_0032450 Ga0501082_0032450_1784_3172 429
194 3300006195 Ga0075366_10007227 Ga0075366_100072272 430
195 3300021361 Ga0213872_10000461 Ga0213872_100004618 430
196 3300021361 Ga0213872_10002920 Ga0213872_100029204 430
197 3300021388 Ga0213875_10018589 Ga0213875_100185892 430
198 3300031251 Ga0265327_10006327 Ga0265327_100063277 430
199 3300031344 Ga0265316_10103721 Ga0265316_101037211 430
200 3300039447 Ga0436361_0062779 Ga0436361_0062779_8932_10326 430
201 3300039447 Ga0436361_1206774 Ga0436361_1206774_7809_9236 430
202 3300045051 Ga0451576_0000478 Ga0451576_0000478_20817_22223 430
203 3300049586 Ga0501070_0019463 Ga0501070_0019463_1949_3346 430
204 3300053134 Ga0500658_0009435 Ga0500658_0009435_204_1625 430
205 3300005458 Ga0070681_10000975 Ga0070681_1000097523 431
206 3300006028 Ga0070717_10136983 Ga0070717_101369832 431
207 3300035241 Ga0373961_0018469 Ga0373961_0018469_343_1761 431
208 3300037418 Ga0395900_0028256 Ga0395900_0028256_3044_4450 431
209 3300037853 Ga0436364_0601668 Ga0436364_0601668_1337_2821 431
210 3300039447 Ga0436361_0520341 Ga0436361_0520341_18_1409 431
211 3300039447 Ga0436361_0549845 Ga0436361_0549845_230_1651 431
212 3300049570 Ga0501033_0063491 Ga0501033_0063491_23_1450 431
213 3300053093 Ga0500651_0003808 Ga0500651_0003808_4433_5860 431
214 3300053119 Ga0500595_000493 Ga0500595_000493_18351_19778 431
215 3300053130 Ga0500642_0007418 Ga0500642_0007418_1916_3331 431
216 3300053142 Ga0500577_0047732 Ga0500577_0047732_131_1546 431
217 3300005436 Ga0070713_100108106 Ga0070713_1001081062 432
218 3300005467 Ga0070706_100068654 Ga0070706_1000686543 432
219 3300005471 Ga0070698_100001199 Ga0070698_10000119925 432
220 3300005536 Ga0070697_100133369 Ga0070697_1001333691 432
221 3300006028 Ga0070717_10000864 Ga0070717_1000086413 432
222 3300009545 Ga0105237_10091752 Ga0105237_100917522 432
223 3300025914 Ga0207671_10141127 Ga0207671_101411272 432
224 3300025916 Ga0207663_10047405 Ga0207663_100474053 432
225 3300028800 Ga0265338_10054969 Ga0265338_100549693 432
226 3300039437 Ga0436365_0221100 Ga0436365_0221100_1022_2452 432
227 3300039447 Ga0436361_1104026 Ga0436361_1104026_887_2269 432
228 3300039453 Ga0436362_0764586 Ga0436362_0764586_911_2341 432
229 3300048919 Ga0496116_0000092 Ga0496116_0000092_43978_45378 432
230 3300048920 Ga0496117_0005156 Ga0496117_0005156_4237_5637 432
231 3300048921 Ga0496118_0025529 Ga0496118_0025529_1472_2872 432
232 3300048927 Ga0496124_0041065 Ga0496124_0041065_1842_3242 432
233 3300049578 Ga0501042_0074657 Ga0501042_0074657_337_1731 432
234 3300049581 Ga0501047_0225026 Ga0501047_0225026_202_1605 432
235 3300049589 Ga0501073_0023437 Ga0501073_0023437_2341_3744 432
236 3300049590 Ga0501074_0086223 Ga0501074_0086223_149_1552 432
237 3300049592 Ga0501076_0006451 Ga0501076_0006451_3616_5010 432
238 3300049741 Ga0501079_0007901 Ga0501079_0007901_3333_4727 432
239 3300061734 Ga0530510_0067137 Ga0530510_0067137_1107_2501 432
240 iso_pu_bacteria 2524023250 2524611198 432
241 iso_pu_bacteria 2597490356 2599102886 432
242 iso_pu_bacteria 2846952575 2846952760 432
243 iso_pu_bacteria 2848858292 2848858292 432
244 3300005435 Ga0070714_100000391 Ga0070714_10000039122 433
245 3300005440 Ga0070705_100032790 Ga0070705_1000327901 433
246 3300005444 Ga0070694_100027315 Ga0070694_1000273153 433
247 3300005467 Ga0070706_100038946 Ga0070706_1000389464 433
248 3300009551 Ga0105238_10025948 Ga0105238_100259484 433
249 3300025913 Ga0207695_10092300 Ga0207695_100923002 433
250 3300025929 Ga0207664_10004216 Ga0207664_100042166 433
251 3300031250 Ga0265331_10006537 Ga0265331_100065375 433
252 3300031456 Ga0307513_10172836 Ga0307513_101728362 433
253 3300031548 Ga0307408_100018313 Ga0307408_1000183132 433
254 3300031595 Ga0265313_10002864 Ga0265313_100028642 433
255 3300031711 Ga0265314_10033963 Ga0265314_100339632 433
256 3300031712 Ga0265342_10031355 Ga0265342_100313554 433
257 3300035695 Ga0373927_0036677 Ga0373927_0036677_233_1711 433
258 3300037068 Ga0373925_0091404 Ga0373925_0091404_883_2298 433
259 3300039062 Ga0400483_108758 Ga0400483_108758_863_2242 433
260 3300039062 Ga0400483_150830 Ga0400483_150830_1930_3309 433
261 3300039447 Ga0436361_0230098 Ga0436361_0230098_259_1677 433
262 3300044712 Ga0453684_0025257 Ga0453684_0025257_4683_6248 433
263 3300053125 Ga0500618_003039 Ga0500618_003039_1065_2483 433
264 3300053131 Ga0500652_011990 Ga0500652_011990_211_1734 433
265 3300053134 Ga0500658_0029124 Ga0500658_0029124_540_2018 433
266 3300053139 Ga0500568_0007785 Ga0500568_0007785_146_1624 433
267 3300053146 Ga0500588_0000549 Ga0500588_0000549_2800_4218 433
268 iso_pu_bacteria 2511231221 2512031949 433
269 iso_pu_bacteria 2522572158 2523106810 433
270 iso_pu_bacteria 8054002106 8054005850 433
271 3300003215 JGI25153J46596_10000054 JGI25153J46596_10000054105 434
272 3300005844 Ga0068862_100018087 Ga0068862_1000180875 434
273 3300025297 Ga0209758_1000048 Ga0209758_100004813 434
274 3300025298 Ga0209050_1006594 Ga0209050_10065947 434
275 3300025303 Ga0209051_1018529 Ga0209051_10185291 434
276 3300025304 Ga0209257_1000562 Ga0209257_100056218 434
277 3300039438 Ga0436360_0072285 Ga0436360_0072285_370_1815 434
278 3300039450 Ga0436363_1261707 Ga0436363_1261707_217_1653 434
279 iso_pu_bacteria 2844533157 2844534621 434
280 3300005434 Ga0070709_10018103 Ga0070709_100181033 435
281 3300005435 Ga0070714_100116071 Ga0070714_1001160711 435
282 3300005435 Ga0070714_100178231 Ga0070714_1001782311 435
283 3300005436 Ga0070713_100103512 Ga0070713_1001035121 435
284 3300005437 Ga0070710_10011041 Ga0070710_100110413 435
285 3300005439 Ga0070711_100153358 Ga0070711_1001533581 435
286 3300005468 Ga0070707_100026405 Ga0070707_1000264055 435
287 3300005471 Ga0070698_100220602 Ga0070698_1002206021 435
288 3300005518 Ga0070699_100028407 Ga0070699_1000284075 435
289 3300005535 Ga0070684_100055471 Ga0070684_1000554711 435
290 3300005546 Ga0070696_100033807 Ga0070696_1000338072 435
291 3300006175 Ga0070712_100045421 Ga0070712_1000454211 435
292 3300007788 Ga0099795_10002309 Ga0099795_100023093 435
293 3300009094 Ga0111539_10012197 Ga0111539_1001219710 435
294 3300025912 Ga0207707_10166995 Ga0207707_101669951 435
295 3300025915 Ga0207693_10002175 Ga0207693_1000217513 435
296 3300025922 Ga0207646_10052030 Ga0207646_100520302 435
297 3300025929 Ga0207664_10020525 Ga0207664_100205251 435
298 3300025939 Ga0207665_10009502 Ga0207665_100095023 435
299 3300031711 Ga0265314_10025050 Ga0265314_100250503 435
300 3300035118 Ga0373954_0001037 Ga0373954_0001037_3157_4608 435
301 3300035172 Ga0373955_0027777 Ga0373955_0027777_230_1681 435
302 3300036401 Ga0373937_0063763 Ga0373937_0063763_1817_3268 435
303 3300039062 Ga0400483_202987 Ga0400483_202987_277_1716 435
304 3300039438 Ga0436360_0622281 Ga0436360_0622281_1775_3229 435
305 3300039438 Ga0436360_1126133 Ga0436360_1126133_377_1822 435
306 3300039447 Ga0436361_0255274 Ga0436361_0255274_343_1788 435
307 3300039453 Ga0436362_0360900 Ga0436362_0360900_924_2375 435
308 3300046472 Ga0495580_0055143 Ga0495580_0055143_1075_2502 435
309 3300049571 Ga0501034_0126618 Ga0501034_0126618_940_2328 435
310 3300049581 Ga0501047_0022030 Ga0501047_0022030_1512_2900 435
311 3300050511 nmdc:mga08y16_811_c1 nmdc:mga08y16_811_c1_19689_21095 435
312 3300053085 Ga0495619_0058368 Ga0495619_0058368_50_1501 435
313 3300053087 Ga0500643_001414 Ga0500643_001414_11983_13347 435
314 3300053087 Ga0500643_002547 Ga0500643_002547_4743_6107 435
315 3300003781 Ga0055536_1006233 Ga0055536_10062334 436
316 3300005937 Ga0081455_10126287 Ga0081455_101262872 436
317 3300006852 Ga0075433_10133132 Ga0075433_101331322 436
318 3300006871 Ga0075434_100039508 Ga0075434_1000395086 436
319 3300009147 Ga0114129_10166655 Ga0114129_101666553 436
320 3300021361 Ga0213872_10000285 Ga0213872_1000028532 436
321 3300025292 Ga0209676_1000049 Ga0209676_1000049101 436
322 3300031251 Ga0265327_10000553 Ga0265327_1000055332 436
323 3300039437 Ga0436365_1541194 Ga0436365_1541194_954_2459 436
324 3300039447 Ga0436361_0694695 Ga0436361_0694695_23906_25330 436
325 3300039447 Ga0436361_1132019 Ga0436361_1132019_903_2423 436
326 3300048905 Ga0496102_0023737 Ga0496102_0023737_944_2383 436
327 3300050507 nmdc:mga05p37_180522_c1 nmdc:mga05p37_180522_c1_444_1883 436
328 3300050512 nmdc:mga0n895_36953_c1 nmdc:mga0n895_36953_c1_289_1728 436
329 3300050515 nmdc:mga0a205_222004_c1 nmdc:mga0a205_222004_c1_19_1458 436
330 3300025254 Ga0209148_1000437 Ga0209148_10004375 437
331 3300025272 Ga0209455_1001264 Ga0209455_10012647 437
332 3300031239 Ga0265328_10007080 Ga0265328_100070804 437
333 3300031250 Ga0265331_10003753 Ga0265331_100037537 437
334 3300031901 Ga0307406_10058522 Ga0307406_100585222 437
335 3300031903 Ga0307407_10043188 Ga0307407_100431881 437
336 3300031903 Ga0307407_10077845 Ga0307407_100778451 437
337 3300039438 Ga0436360_1065945 Ga0436360_1065945_2430_3935 437
338 3300005355 Ga0070671_100167742 Ga0070671_1001677421 438
339 3300005981 Ga0081538_10002289 Ga0081538_100022899 438
340 3300006881 Ga0068865_100064841 Ga0068865_1000648412 438
341 3300021388 Ga0213875_10001222 Ga0213875_1000122215 438
342 3300026118 Ga0207675_100100899 Ga0207675_1001008992 438
343 3300027907 Ga0207428_10006811 Ga0207428_100068113 438
344 3300035692 Ga0373935_0035098 Ga0373935_0035098_1402_2856 438
345 3300037853 Ga0436364_0266134 Ga0436364_0266134_34620_36110 438
346 3300042876 Ga0451577_0066156 Ga0451577_0066156_232_1722 438
347 3300044712 Ga0453684_0000048 Ga0453684_0000048_485483_486973 438
348 3300044712 Ga0453684_0000077 Ga0453684_0000077_248271_249734 438
349 iso_pu_bacteria 2821443989 2821445966 438
350 3300021388 Ga0213875_10001077 Ga0213875_100010774 439
351 3300021388 Ga0213875_10071068 Ga0213875_100710681 439
352 3300038705 Ga0237819_00303 Ga0237819_00303_2081_3481 440
353 3300003187 JGI25151J46595_10000672 JGI25151J46595_1000067224 441
354 3300003354 JGI25160J50197_1005150 JGI25160J50197_10051501 441
355 3300025284 Ga0209130_1001605 Ga0209130_10016058 441
356 3300025294 Ga0209025_1000636 Ga0209025_100063651 441
357 3300025297 Ga0209758_1017023 Ga0209758_10170232 441
358 3300025302 Ga0207426_1000088 Ga0207426_100008883 441
359 3300046512 Ga0495610_0039803 Ga0495610_0039803_683_2077 441
360 iso_pu_bacteria 2842333319 2842335747 441

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00308

Bac_DnaA

Bacterial DnaA ATPAse domain

184

345

0.99

PF08299

Bac_DnaA_C

Bacterial dnaA protein helix-turn-helix

428

496

0.99

PF11638

DnaA_N

DnaA N-terminal domain

4

67

0.96

PF01695

IstB_IS21

IstB-like ATP binding protein

180

328

0.82

PF00004

AAA

ATPase family associated with various cellular activities (AAA)

220

339

0.69

Structural Annotation

Top 5 Hits

ID Description Score Start End
1j1v-assembly1.cif.gz_A crystal structure of dnaa domainiv complexed with dnaabox dna 0.9911 349 441
3pvv-assembly2.cif.gz_B structure of mycobacterium tuberculosis dnaa-dbd in complex with box1 dna 0.9766 349 439
1j1v-assembly1.cif.gz_A crystal structure of dnaa domainiv complexed with dnaabox dna 0.9704 349 441
2z4r-assembly2.cif.gz_B crystal structure of domain iii from the thermotoga maritima replication initiation protein dnaa 0.9639 104 341
8bv3-assembly1.cif.gz_E bacillus subtilis dnaa domain iii structure 0.962 105 338
ID Description Score Start End Superfamily
af_P03004_374_467_1.10.1750.10 Mainly Alpha;Orthogonal Bundle;Chromosomal Replication Initiator Protein Dnaa; Chain: A;;DnaA protein, C-terminal DNA-binding domain 0.9915 349 441 1.10.1750.10
1j1vA00 Mainly Alpha;Orthogonal Bundle;Chromosomal Replication Initiator Protein Dnaa; Chain: A;;DnaA protein, C-terminal DNA-binding domain 0.9905 349 441 1.10.1750.10
af_Q2G2H5_351_453_1.10.1750.10 Mainly Alpha;Orthogonal Bundle;Chromosomal Replication Initiator Protein Dnaa; Chain: A;;DnaA protein, C-terminal DNA-binding domain 0.9873 347 440 1.10.1750.10
3pvvB00 Mainly Alpha;Orthogonal Bundle;Chromosomal Replication Initiator Protein Dnaa; Chain: A;;DnaA protein, C-terminal DNA-binding domain 0.9766 349 439 1.10.1750.10
2z4rA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9763 104 271 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A3D0UU51-F1-model_v4 Chromosomal replication initiator protein DnaA ATPAse domain-containing protein 0.9921 138 261 GO:0003688
GO:0005886
GO:0006270
AF-A0A4Q9W1X5-F1-model_v4 Chromosomal replication initiator protein DnaA 0.9892 347 440 GO:0003688
GO:0005524
GO:0005886
GO:0006270
GO:0006275
AF-A0A2N2FEJ6-F1-model_v4 Chromosomal replication initiator protein DnaA 0.9889 347 440 GO:0003688
GO:0005524
GO:0005886
GO:0006270
GO:0006275
AF-A0A1A9G0C5-F1-model_v4 Chromosomal replication initiator protein DnaA 0.9876 349 439 GO:0003688
GO:0005524
GO:0005886
GO:0006270
GO:0006275
AF-A0A351TBN2-F1-model_v4 Chromosomal replication initiator protein DnaA ATPAse domain-containing protein 0.9869 170 262 GO:0003688
GO:0005886
GO:0006270

Feature Viewer

pLDDT pTM Quality
88.76 0.59 Medium
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Predicted Structure (AlphaFold2)

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