F421281

General Info

Members Datasets Scaffolds Average Seq Length
358 236 308 250

Family's Representative Sequence

Representative Sequence 3300046512|Ga0495610_0000210|Ga0495610_0000210_44561_45397
Length 278
Sequence MDVRVYPVLRATQIMDVRSVVKGVAMSTVLITGCSSGFGLETAELFLARGWNVVATMRTPRADVLPPSDRLRVLALDVTDPESIARAIAEAGPIDALVNNAGFGAPVPVELTPMDTARALFETNTLGTLAVTQAVLPQLRERGAGVVVNVTSSVTLKALPLVGVYSASKAAVNAFTESLAIEVEPFGVRVRLVLPGRAPTTRFGANAGVHLGGMDHPAYEPLVNGVIASFRDTSGPVTHAPDVAKAVWRAVTDPATPMRIAAGADAEAWMAQGHQLKL

Samples

Sample ID Description Type Environment
1 2501025502 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
2 2508501125 Burkholderia sp. WSM2232 Isolate Nodule
3 2510917013 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
4 2513237082 Paraburkholderia mimosarum STM3621 Isolate Nodule
5 2513237083 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
6 2513237151 Burkholderia sp. WSM2230 Isolate Nodule
7 2515154189 Paraburkholderia nodosa DSM 21604 Isolate Unclassified
8 2547132181 Kosakonia sacchari SP1 Isolate Stem
9 2561511199 Enterobacter sp. R4-368 Isolate Nodule
10 2599185239 Burkholderia sp. NFACC38-1 Isolate Rhizoplane
11 2600255256 Enterobacter sp. NFIX08 Isolate Rhizoplane
12 2600255257 Enterobacter sp. NFIX03 Isolate Rhizoplane
13 2600255310 Enterobacter sp. NFIX06 Isolate Rhizoplane
14 2600255311 Enterobacter sp. NFIX04 Isolate Rhizoplane
15 2602042046 Enterobacter sp. NFIX09 Isolate Rhizoplane
16 2609459761 Enterobacter sp. NFR05 Isolate Rhizoplane
17 2687453130 Dyella thiooxydans ATSB10 Isolate Unclassified
18 2744054900 Paraburkholderia ginsengiterrae DCY85-1 Isolate Unclassified
19 2744054901 Paraburkholderia ginsengiterrae DCY85 Isolate Unclassified
20 2747842428 Stenotrophomonas sp. WCS2014-113 Isolate Unclassified
21 2765235840 Stenotrophomonas maltophilia AA1 Isolate Unclassified
22 2808606384 Burkholderia sp. SJZ089 Isolate Rhizosphere
23 2808606390 Burkholderia sp. SJZ115 Isolate Rhizosphere
24 2808606391 Burkholderia sp. SJZ091 Isolate Rhizosphere
25 2811995292 Kosakonia oryzae Ola 51 Isolate Unclassified
26 2814123068 Kosakonia radicincitans GXGL-4A Isolate Rhizosphere
27 2824617872 Bradyrhizobium sp. HAMBI 2133 Isolate Unclassified
28 2824626560 Bradyrhizobium sp. HAMBI 2149 Isolate Unclassified
29 2824635225 Bradyrhizobium sp. HAMBI 2136 Isolate Unclassified
30 2824644064 Bradyrhizobium sp. HAMBI 2137 Isolate Unclassified
31 2824714736 Bradyrhizobium sp. HAMBI 2151 Isolate Unclassified
32 2824723954 Bradyrhizobium sp. HAMBI 2152 Isolate Unclassified
33 2842757796 Stenotrophomonas sp. R-72406 Isolate Unclassified
34 2863421361 Burkholderia cenocepacia CACua-24 Isolate Rhizosphere
35 2883087390 Paraburkholderia guartelaensis CNPSo 3008 Isolate Unclassified
36 2904483920 Paraburkholderia caledonica 575 Isolate Unclassified
37 2904564687 Burkholderia sp. 571 Isolate Unclassified
38 2904571731 Burkholderia cenocepacia 574 Isolate Unclassified
39 2919527303 Paraburkholderia strydomiana 3827 Isolate Unclassified
40 2928536128 Burkholderia sola 565 Isolate Unclassified
41 2945874760 Phytobacter diazotrophicus UAEU22 Isolate Rhizosphere
42 2996336353 Mesorhizobium sp. YM1C-6-2 Isolate Unclassified
43 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
44 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
45 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
46 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
47 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
48 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
49 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
50 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
51 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
52 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
53 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
54 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
55 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
56 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
57 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
58 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
59 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
60 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
61 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
62 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
63 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
64 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
65 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
66 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
67 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
68 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
69 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
70 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
71 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
72 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
73 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
74 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
75 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
76 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
77 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
78 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
79 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
80 3300015685 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.5_G12 Metagenome Unclassified
81 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
82 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
83 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
88 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
89 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
91 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
92 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
93 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
94 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
95 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
96 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
97 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
98 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
99 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
100 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
101 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
102 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
103 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
104 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
105 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
106 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
114 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
117 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
118 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
119 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
120 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
121 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
122 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
123 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
124 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
125 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
126 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
127 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
128 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
129 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
130 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
131 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
132 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
133 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
134 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
135 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
136 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
137 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
138 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
139 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
140 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
141 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
142 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
143 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
144 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
145 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
146 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
147 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
148 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
149 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
150 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
151 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
152 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
153 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
154 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
155 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
156 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
157 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
158 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
159 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
160 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
161 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
162 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
163 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
164 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
165 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
166 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
167 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
168 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
169 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
170 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
171 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
172 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
173 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
174 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
175 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
176 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
177 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
178 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
179 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
180 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
181 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
182 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
183 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
184 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
185 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
186 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
187 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
188 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
189 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
190 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
191 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
192 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
193 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
194 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
195 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
196 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
197 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
198 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
199 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
200 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
201 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
202 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
203 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
204 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
205 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
206 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
207 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
208 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
209 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
210 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
211 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
212 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
213 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
214 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
215 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
216 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
217 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
218 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
219 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
220 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
221 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
222 3300053127 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 endosphere Metagenome Endosphere
223 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
224 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
225 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
226 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
227 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
228 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
229 642555113 Paraburkholderia phytofirmans PsJN Isolate Unclassified
230 8003955200 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
231 8005682033 Rhizobium dioscoreae S-93 Isolate Unclassified
232 8018845410 Burkholderia reimsis BE51 Isolate Rhizosphere
233 8020938398 Burkholderia sp. BE12 Isolate Rhizosphere
234 8020953355 Burkholderia sp. BE24 Isolate Rhizosphere
235 8021120328 Burkholderia sp. LS-044 Isolate Rhizosphere
236 8055301274 Paraburkholderia kirstenboschensis LMG 28727 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 86.03
Metatranscriptomes 0
Isolates 13.97

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 18.72
Nodule 1.96
Rhizoplane 2.79
Rhizosphere 58.66
Stem 0.28
Stem Tuber 0
Unclassified 17.6

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25162J39368_1000662 3300002737 Bacteria 24367
2 JGI25162J39368_1000845 3300002737 Bacteria 20225
3 JGI25164J39214_1000117 3300002772 Bacteria 76695
4 JGI25165J46597_1000235 3300003214 Bacteria 76684
5 rootH1_10036958 3300003316 Bacteria 5466
6 rootH2_10054390 3300003320 Bacteria 7960
7 rootH2_10253298 3300003320 Bacteria 2875
8 rootL2_10270448 3300003322 Bacteria 2145
9 Ga0055533_1000104 3300003756 Bacteria 106505
10 Ga0055532_1000621 3300003758 Bacteria 13968
11 Ga0055532_1000651 3300003758 Bacteria 13364
12 Ga0055527_1000006 3300003760 Bacteria 494004
13 Ga0055527_1000152 3300003760 Bacteria 49107
14 Ga0055527_1001258 3300003760 Bacteria 5572
15 Ga0055535_1000003 3300003761 Bacteria 494004
16 Ga0055535_1000314 3300003761 Bacteria 49107
17 Ga0055542_1000007 3300003762 Bacteria 494004
18 Ga0055542_1000185 3300003762 Bacteria 76944
19 Ga0055542_1000342 3300003762 Bacteria 49268
20 Ga0055529_1000003 3300003763 Bacteria 494004
21 Ga0055529_1000210 3300003763 Bacteria 76948
22 Ga0055529_1000252 3300003763 Bacteria 65454
23 Ga0055524_1016485 3300003775 Bacteria 2650
24 Ga0055528_1000688 3300003790 Bacteria 24140
25 Ga0058692_1015040 3300003856 Bacteria 1755
26 Ga0065165_1000001 3300005262 Bacteria 494087
27 Ga0065704_10079013 3300005289 Bacteria 4281
28 Ga0065707_10195598 3300005295 Bacteria 1314
29 Ga0070687_100443194 3300005343 Bacteria 862
30 Ga0068859_100055340 3300005617 Bacteria 3992
31 Ga0068864_100304208 3300005618 Bacteria 1493
32 Ga0068863_100574932 3300005841 Bacteria 1114
33 Ga0068860_100254094 3300005843 Bacteria 1712
34 Ga0075369_10082865 3300006186 Bacteria 1424
35 Ga0075370_10064143 3300006353 Bacteria 2095
36 Ga0097620_100055336 3300006931 Bacteria 3992
37 Ga0105240_10000005 3300009093 Bacteria 702630
38 Ga0105240_10000639 3300009093 Bacteria 64584
39 Ga0105240_10001311 3300009093 Bacteria 42926
40 Ga0105240_10323009 3300009093 Bacteria 1758
41 Ga0105243_10021717 3300009148 Bacteria 4874
42 Ga0105248_10489630 3300009177 Bacteria 1386
43 Ga0105249_10027841 3300009553 Bacteria 5100
44 Ga0105239_10002635 3300010375 Bacteria 22658
45 Ga0105239_10027598 3300010375 Bacteria 6247
46 Ga0157370_10000163 3300013104 Bacteria 81428
47 Ga0157369_10244999 3300013105 Bacteria 1871
48 Ga0163162_10222024 3300013306 Bacteria 2019
49 Ga0163163_10108876 3300014325 Bacteria 2798
50 Ga0182006_1062028 3300015261 Bacteria 1408
51 Ga0182007_10007105 3300015262 Bacteria 4736
52 Ga0183369_1003 3300015685 Bacteria 726443
53 Ga0213872_10021500 3300021361 Bacteria 2971
54 Ga0213876_10000136 3300021384 Bacteria 80323
55 Ga0209674_100025 3300025226 Bacteria 515942
56 Ga0209672_100002 3300025228 Bacteria 1733325
57 Ga0209672_100032 3300025228 Bacteria 324684
58 Ga0209672_100089 3300025228 Bacteria 120658
59 Ga0209147_100003 3300025229 Bacteria 1733325
60 Ga0209147_100012 3300025229 Bacteria 681990
61 Ga0209147_100063 3300025229 Bacteria 241980
62 Ga0209563_101417 3300025230 Bacteria 6397
63 Ga0207427_100051 3300025231 Bacteria 218792
64 Ga0207427_106440 3300025231 Bacteria 1489
65 Ga0209437_100152 3300025233 Bacteria 154551
66 Ga0209258_100005 3300025242 Bacteria 1087938
67 Ga0209258_100030 3300025242 Bacteria 470208
68 Ga0209258_100101 3300025242 Bacteria 210252
69 Ga0209646_1023817 3300025246 Bacteria 866
70 Ga0209026_1000572 3300025250 Bacteria 24538
71 Ga0209677_101839 3300025253 Bacteria 8647
72 Ga0209148_1000006 3300025254 Bacteria 1733325
73 Ga0209148_1000022 3300025254 Bacteria 681990
74 Ga0209148_1000079 3300025254 Bacteria 288992
75 Ga0209148_1000291 3300025254 Bacteria 75215
76 Ga0209759_1000014 3300025256 Bacteria 396291
77 Ga0209759_1000028 3300025256 Bacteria 298755
78 Ga0209759_1000667 3300025256 Bacteria 31811
79 Ga0209759_1002343 3300025256 Bacteria 8464
80 Ga0209233_1000018 3300025261 Bacteria 886857
81 Ga0209233_1000099 3300025261 Bacteria 293995
82 Ga0209565_1010327 3300025263 Bacteria 2318
83 Ga0209455_1000003 3300025272 Bacteria 1471893
84 Ga0209455_1000016 3300025272 Bacteria 753097
85 Ga0209455_1000024 3300025272 Bacteria 676133
86 Ga0209673_1000056 3300025273 Bacteria 271069
87 Ga0209676_1000225 3300025292 Bacteria 124018
88 Ga0209025_1016132 3300025294 Bacteria 4441
89 Ga0209564_1014508 3300025295 Bacteria 3272
90 Ga0209050_1019685 3300025298 Bacteria 2550
91 Ga0209256_1000200 3300025299 Bacteria 112931
92 Ga0207426_1025563 3300025302 Bacteria 1987
93 Ga0209051_1020001 3300025303 Bacteria 2903
94 Ga0207647_10011609 3300025904 Bacteria 6169
95 Ga0207695_10000011 3300025913 Bacteria 910221
96 Ga0207695_10000591 3300025913 Bacteria 73179
97 Ga0207695_10000840 3300025913 Bacteria 56353
98 Ga0207659_10163541 3300025926 Bacteria 1750
99 Ga0207709_10017999 3300025935 Bacteria 3952
100 Ga0207711_10341448 3300025941 Bacteria 1386
101 Ga0207702_10369074 3300026078 Bacteria 1377
102 Ga0207674_10066563 3300026116 Bacteria 3628
103 Ga0209371_1000076 3300027312 Bacteria 195166
104 Ga0209371_1000161 3300027312 Bacteria 103536
105 Ga0268265_10183072 3300028380 Bacteria 1802
106 Ga0268264_10742598 3300028381 Bacteria 977
107 Ga0268256_1000012 3300030500 Bacteria 794553
108 Ga0268256_1000087 3300030500 Bacteria 157659
109 Ga0268256_1005429 3300030500 Bacteria 5002
110 Ga0316176_1081342 3300030732 Bacteria 1550
111 Ga0307410_10197401 3300031852 Bacteria 1534
112 Ga0307406_10126308 3300031901 Bacteria 1788
113 Ga0307412_10084778 3300031911 Bacteria 2200
114 Ga0307414_10360233 3300032004 Bacteria 1251
115 Ga0307414_10419265 3300032004 Bacteria 1167
116 Ga0307411_10028235 3300032005 Bacteria 3409
117 Ga0307411_10354964 3300032005 Bacteria 1197
118 Ga0395900_0009399 3300037418 Bacteria 10025
119 Ga0395901_0013738 3300038443 Bacteria 8229
120 Ga0237819_11759 3300038705 Bacteria 1100
121 Ga0436365_0368505 3300039437 Bacteria 454216
122 Ga0436361_0080210 3300039447 Bacteria 6585
123 Ga0466969_0045530 3300044656 Bacteria 2178
124 Ga0466966_0045366 3300044684 Bacteria 2810
125 Ga0466961_0025874 3300044693 Bacteria 3772
126 Ga0466957_0115105 3300044842 Bacteria 1709
127 Ga0495592_0007194 3300046454 Bacteria 8343
128 Ga0495590_0021347 3300046457 Bacteria 2295
129 Ga0495591_004866 3300046458 Bacteria 6398
130 Ga0495629_0010729 3300046459 Bacteria 6664
131 Ga0495629_0011441 3300046459 Bacteria 6446
132 Ga0495629_0024763 3300046459 Bacteria 4272
133 Ga0495638_0035246 3300046460 Bacteria 3191
134 Ga0495641_0009869 3300046461 Bacteria 5621
135 Ga0495641_0035321 3300046461 Bacteria 2358
136 Ga0495651_0032280 3300046462 Bacteria 4085
137 Ga0495651_0071281 3300046462 Bacteria 2642
138 Ga0495653_0008715 3300046463 Bacteria 8308
139 Ga0495653_0018248 3300046463 Bacteria 5701
140 Ga0495650_0081718 3300046471 Bacteria 1244
141 Ga0495580_0000691 3300046472 Bacteria 28764
142 Ga0495580_0005811 3300046472 Bacteria 10127
143 Ga0495580_0007091 3300046472 Bacteria 9030
144 Ga0495580_0084547 3300046472 Bacteria 2210
145 Ga0495580_0117373 3300046472 Bacteria 1848
146 Ga0495582_0002984 3300046473 Bacteria 9481
147 Ga0495662_0019046 3300046476 Bacteria 3321
148 Ga0495664_0002682 3300046477 Bacteria 9576
149 Ga0495664_0010786 3300046477 Bacteria 5137
150 Ga0495596_0002466 3300046500 Bacteria 9944
151 Ga0495583_0000276 3300046506 Bacteria 82963
152 Ga0495606_0000487 3300046507 Bacteria 64941
153 Ga0495608_0001973 3300046511 Bacteria 14703
154 Ga0495610_0000210 3300046512 Bacteria 64154
155 Ga0495618_0003481 3300046514 Bacteria 9769
156 Ga0495618_0017410 3300046514 Bacteria 4408
157 Ga0495620_0131454 3300046515 Bacteria 982
158 Ga0495628_0005223 3300046516 Bacteria 11398
159 Ga0495628_0017413 3300046516 Bacteria 5983
160 Ga0495628_0030020 3300046516 Bacteria 4403
161 Ga0495628_0169747 3300046516 Bacteria 1654
162 Ga0495628_0274785 3300046516 Bacteria 1252
163 Ga0495630_0005440 3300046517 Bacteria 8991
164 Ga0495630_0033417 3300046517 Bacteria 3836
165 Ga0495631_0000076 3300046518 Bacteria 63613
166 Ga0495648_0006327 3300046524 Bacteria 9685
167 Ga0495648_0006415 3300046524 Bacteria 9604
168 Ga0495663_0003636 3300046525 Bacteria 4419
169 Ga0495666_0002710 3300046526 Bacteria 8847
170 Ga0495666_0006300 3300046526 Bacteria 5977
171 Ga0495666_0006302 3300046526 Bacteria 5977
172 Ga0495642_0000477 3300046528 Bacteria 20542
173 Ga0495652_0013882 3300046529 Bacteria 7245
174 Ga0495652_0014630 3300046529 Bacteria 7035
175 Ga0495665_0004185 3300046531 Bacteria 7785
176 Ga0495665_0008869 3300046531 Bacteria 5456
177 Ga0495640_0015353 3300046533 Bacteria 5765
178 Ga0495640_0022599 3300046533 Bacteria 4593
179 Ga0495640_0044129 3300046533 Bacteria 3101
180 Ga0495586_0005638 3300046535 Bacteria 6689
181 Ga0495587_0001963 3300046536 Bacteria 13708
182 Ga0495597_0134951 3300046542 Bacteria 1021
183 Ga0495645_0015669 3300046543 Bacteria 5393
184 Ga0495645_0019038 3300046543 Bacteria 4942
185 Ga0495633_0000328 3300046558 Bacteria 53654
186 Ga0495667_0105015 3300046559 Bacteria 1826
187 Ga0495634_0005066 3300046642 Bacteria 10177
188 Ga0495634_0009679 3300046642 Bacteria 7094
189 Ga0495634_0190484 3300046642 Bacteria 1279
190 Ga0495611_0073025 3300046648 Bacteria 1570
191 Ga0495625_0002958 3300046660 Bacteria 17693
192 Ga0495625_0028739 3300046660 Bacteria 4165
193 Ga0495625_0283365 3300046660 Bacteria 1065
194 Ga0495635_0001124 3300046663 Bacteria 17796
195 Ga0495635_0070910 3300046663 Bacteria 2388
196 Ga0495661_0001867 3300046665 Bacteria 16830
197 Ga0495661_0005690 3300046665 Bacteria 8826
198 Ga0495661_0189916 3300046665 Bacteria 1082
199 Ga0495588_0048484 3300046674 Bacteria 2182
200 Ga0495599_0013644 3300046678 Bacteria 5021
201 Ga0495599_0342487 3300046678 Bacteria 897
202 Ga0495623_0012497 3300046679 Bacteria 5493
203 Ga0495646_0002854 3300046680 Bacteria 10695
204 Ga0495646_0003279 3300046680 Bacteria 10074
205 Ga0495646_0054172 3300046680 Bacteria 2414
206 Ga0495613_0004014 3300046689 Bacteria 11015
207 Ga0495613_0090400 3300046689 Bacteria 2217
208 Ga0495624_0000143 3300046690 Bacteria 51520
209 Ga0495624_0001622 3300046690 Bacteria 17246
210 Ga0495624_0015610 3300046690 Bacteria 5122
211 Ga0495624_0035764 3300046690 Bacteria 3205
212 Ga0495671_0052017 3300046692 Bacteria 2036
213 Ga0495649_0000651 3300046694 Bacteria 28258
214 Ga0495649_0006108 3300046694 Bacteria 7529
215 Ga0495649_0017166 3300046694 Bacteria 4088
216 Ga0495649_0154407 3300046694 Bacteria 1205
217 Ga0495589_0020066 3300046794 Bacteria 3418
218 Ga0495589_0079202 3300046794 Bacteria 1599
219 Ga0495589_0099257 3300046794 Bacteria 1409
220 Ga0495600_0063010 3300046809 Bacteria 2423
221 Ga0495600_0127517 3300046809 Bacteria 1655
222 Ga0495660_0004038 3300046810 Bacteria 8958
223 Ga0495581_0011034 3300047315 Bacteria 5221
224 Ga0495581_0028502 3300047315 Bacteria 3236
225 Ga0495604_0000321 3300047317 Bacteria 43022
226 Ga0495604_0004786 3300047317 Bacteria 10728
227 Ga0495604_0011027 3300047317 Bacteria 7173
228 Ga0495604_0064820 3300047317 Bacteria 2782
229 Ga0495674_0006553 3300047319 Bacteria 11171
230 Ga0495672_0001726 3300047320 Bacteria 21137
231 Ga0495672_0036776 3300047320 Bacteria 3003
232 Ga0495676_0006496 3300047321 Bacteria 10776
233 Ga0495676_0164831 3300047321 Bacteria 1564
234 Ga0495680_0005562 3300047322 Bacteria 11828
235 Ga0495680_0011825 3300047322 Bacteria 7707
236 Ga0495680_0017296 3300047322 Bacteria 6161
237 Ga0495680_0034473 3300047322 Bacteria 4086
238 Ga0495683_0000990 3300047323 Bacteria 19873
239 Ga0495683_0029290 3300047323 Bacteria 2814
240 Ga0495675_0016056 3300047444 Bacteria 4735
241 Ga0495675_0031472 3300047444 Bacteria 3387
242 Ga0495675_0040042 3300047444 Bacteria 2985
243 Ga0495675_0059424 3300047444 Bacteria 2423
244 Ga0495679_001373 3300047446 Bacteria 13976
245 Ga0495679_003270 3300047446 Bacteria 7851
246 Ga0495681_0021333 3300047470 Bacteria 3494
247 Ga0495684_0049641 3300047471 Bacteria 3205
248 Ga0495684_0082676 3300047471 Bacteria 2436
249 Ga0495686_0000548 3300047472 Bacteria 53688
250 Ga0495686_0006682 3300047472 Bacteria 8777
251 Ga0495686_0023385 3300047472 Bacteria 4076
252 Ga0495593_0024411 3300047673 Bacteria 3350
253 Ga0495593_0026673 3300047673 Bacteria 3187
254 Ga0495593_0049797 3300047673 Bacteria 2221
255 Ga0495602_0001405 3300048088 Bacteria 23808
256 Ga0495602_0006361 3300048088 Bacteria 12386
257 Ga0495602_0024194 3300048088 Bacteria 5896
258 Ga0495602_0051575 3300048088 Bacteria 3662
259 Ga0495602_0066537 3300048088 Bacteria 3103
260 Ga0495614_0002758 3300048089 Bacteria 7804
261 Ga0495626_0029415 3300048091 Bacteria 2659
262 Ga0496102_0012559 3300048905 Bacteria 7336
263 Ga0496102_0403869 3300048905 Bacteria 1284
264 Ga0496103_0180572 3300048906 Bacteria 1356
265 Ga0496116_0008043 3300048919 Bacteria 9225
266 Ga0496117_0000195 3300048920 Bacteria 123331
267 Ga0496118_0000016 3300048921 Bacteria 549586
268 Ga0496118_0002064 3300048921 Bacteria 28295
269 Ga0496119_0003548 3300048922 Bacteria 16103
270 Ga0496119_0015111 3300048922 Bacteria 5974
271 Ga0496120_0000015 3300048923 Bacteria 310795
272 Ga0496120_0003855 3300048923 Bacteria 13173
273 Ga0496120_0059294 3300048923 Bacteria 2145
274 Ga0496121_0043806 3300048924 Bacteria 3869
275 Ga0496121_0145470 3300048924 Bacteria 1752
276 Ga0496122_0000595 3300048925 Bacteria 74359
277 Ga0496122_0018449 3300048925 Bacteria 6443
278 Ga0496122_0187862 3300048925 Bacteria 1223
279 Ga0496123_0000211 3300048926 Bacteria 118697
280 Ga0496123_0014187 3300048926 Bacteria 6622
281 Ga0496124_0002131 3300048927 Bacteria 26592
282 Ga0496124_0005614 3300048927 Bacteria 14035
283 Ga0496125_0005713 3300048928 Bacteria 13710
284 Ga0496125_0007565 3300048928 Bacteria 11535
285 Ga0496126_0000164 3300048929 Bacteria 152791
286 Ga0496126_0000272 3300048929 Bacteria 110072
287 Ga0496126_0027098 3300048929 Bacteria 5482
288 Ga0496126_0036398 3300048929 Bacteria 4603
289 Ga0496126_0120711 3300048929 Bacteria 2273
290 Ga0496126_0223082 3300048929 Bacteria 1582
291 Ga0501038_0252668 3300049574 Bacteria 1396
292 Ga0501043_0097214 3300049579 Bacteria 2315
293 Ga0501043_0305611 3300049579 Bacteria 1215
294 Ga0501070_0499476 3300049586 Bacteria 977
295 Ga0501080_0507711 3300049742 Bacteria 1077
296 Ga0501035_0307891 3300049822 Bacteria 1333
297 Ga0501035_0481039 3300049822 Bacteria 1024
298 nmdc:mga07m45_200161_c1 3300050496 Bacteria 1162
299 nmdc:mga0sz30_25764_c1 3300050516 Bacteria 1415
300 Ga0500646_0006681 3300053090 Bacteria 2934
301 Ga0500651_0035973 3300053093 Bacteria 3120
302 Ga0500623_124207 3300053127 Bacteria 1123
303 Ga0500642_0000739 3300053130 Bacteria 9646
304 Ga0500652_000678 3300053131 Bacteria 11565
305 Ga0500577_0115907 3300053142 Bacteria 1110
306 Ga0500589_099796 3300053147 Bacteria 1263
307 Ga0500604_0047207 3300053151 Bacteria 1319
308 Ga0500622_0000689 3300053156 Bacteria 29849

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300037418 Ga0395900_0009399 Ga0395900_0009399_9319_9990 219
2 3300046459 Ga0495629_0010729 Ga0495629_0010729_1087_1911 231
3 3300046461 Ga0495641_0009869 Ga0495641_0009869_2170_2994 231
4 3300046463 Ga0495653_0008715 Ga0495653_0008715_3147_3971 231
5 3300046472 Ga0495580_0000691 Ga0495580_0000691_993_1817 231
6 3300046473 Ga0495582_0002984 Ga0495582_0002984_2988_3812 231
7 3300046476 Ga0495662_0019046 Ga0495662_0019046_134_958 231
8 3300046477 Ga0495664_0002682 Ga0495664_0002682_1080_1904 231
9 3300046514 Ga0495618_0003481 Ga0495618_0003481_3365_4189 231
10 3300046516 Ga0495628_0017413 Ga0495628_0017413_993_1817 231
11 3300046517 Ga0495630_0005440 Ga0495630_0005440_311_1135 231
12 3300046524 Ga0495648_0006415 Ga0495648_0006415_835_1659 231
13 3300046526 Ga0495666_0006300 Ga0495666_0006300_1116_1940 231
14 3300046533 Ga0495640_0022599 Ga0495640_0022599_3063_3887 231
15 3300046535 Ga0495586_0005638 Ga0495586_0005638_1870_2694 231
16 3300046536 Ga0495587_0001963 Ga0495587_0001963_1080_1904 231
17 3300046543 Ga0495645_0015669 Ga0495645_0015669_707_1531 231
18 3300046642 Ga0495634_0005066 Ga0495634_0005066_6047_6871 231
19 3300046648 Ga0495611_0073025 Ga0495611_0073025_487_1311 231
20 3300046663 Ga0495635_0001124 Ga0495635_0001124_15939_16763 231
21 3300046665 Ga0495661_0005690 Ga0495661_0005690_3144_3968 231
22 3300046674 Ga0495588_0048484 Ga0495588_0048484_486_1310 231
23 3300046678 Ga0495599_0013644 Ga0495599_0013644_1116_1940 231
24 3300046680 Ga0495646_0002854 Ga0495646_0002854_1121_1945 231
25 3300046689 Ga0495613_0004014 Ga0495613_0004014_2448_3272 231
26 3300046690 Ga0495624_0015610 Ga0495624_0015610_4039_4863 231
27 3300046809 Ga0495600_0063010 Ga0495600_0063010_788_1612 231
28 3300047315 Ga0495581_0011034 Ga0495581_0011034_4010_4834 231
29 3300047317 Ga0495604_0011027 Ga0495604_0011027_5962_6786 231
30 3300047321 Ga0495676_0006496 Ga0495676_0006496_5633_6457 231
31 3300047322 Ga0495680_0011825 Ga0495680_0011825_4039_4863 231
32 3300047444 Ga0495675_0016056 Ga0495675_0016056_1615_2439 231
33 3300047446 Ga0495679_003270 Ga0495679_003270_3165_3989 231
34 3300047470 Ga0495681_0021333 Ga0495681_0021333_1634_2383 231
35 3300047471 Ga0495684_0049641 Ga0495684_0049641_1313_2137 231
36 3300047472 Ga0495686_0006682 Ga0495686_0006682_6206_6967 231
37 3300047673 Ga0495593_0049797 Ga0495593_0049797_1104_1928 231
38 3300048088 Ga0495602_0024194 Ga0495602_0024194_1210_2034 231
39 3300046660 Ga0495625_0028739 Ga0495625_0028739_2664_3437 232
40 3300049586 Ga0501070_0499476 Ga0501070_0499476_23_787 233
41 3300049742 Ga0501080_0507711 Ga0501080_0507711_38_802 233
42 3300048929 Ga0496126_0223082 Ga0496126_0223082_628_1377 237
43 3300048905 Ga0496102_0012559 Ga0496102_0012559_3650_4414 238
44 3300048905 Ga0496102_0403869 Ga0496102_0403869_239_997 238
45 3300048906 Ga0496103_0180572 Ga0496103_0180572_534_1298 238
46 3300048919 Ga0496116_0008043 Ga0496116_0008043_5241_6005 238
47 3300048920 Ga0496117_0000195 Ga0496117_0000195_72788_73552 238
48 3300048921 Ga0496118_0000016 Ga0496118_0000016_315075_315839 238
49 3300048923 Ga0496120_0059294 Ga0496120_0059294_304_1068 238
50 3300048924 Ga0496121_0043806 Ga0496121_0043806_1366_2130 238
51 3300048929 Ga0496126_0120711 Ga0496126_0120711_826_1590 238
52 3300005262 Ga0065165_1000001 Ga0065165_1000001231 239
53 3300025302 Ga0207426_1025563 Ga0207426_10255632 239
54 3300048922 Ga0496119_0015111 Ga0496119_0015111_3472_4236 240
55 3300048923 Ga0496120_0003855 Ga0496120_0003855_3156_3920 240
56 3300048925 Ga0496122_0018449 Ga0496122_0018449_1304_2074 240
57 3300048926 Ga0496123_0014187 Ga0496123_0014187_1315_2085 240
58 3300048928 Ga0496125_0005713 Ga0496125_0005713_11984_12748 240
59 3300003322 rootL2_10270448 rootL2_102704482 242
60 iso_pu_bacteria 2687453130 2687581754 242
61 iso_pu_bacteria 2996336353 2996337608 242
62 iso_pu_bacteria 2508501125 2509127329 243
63 iso_pu_bacteria 2513237151 2513962100 243
64 iso_pu_bacteria 2824617872 2824625314 243
65 iso_pu_bacteria 2824626560 2824634113 243
66 iso_pu_bacteria 2824635225 2824641281 243
67 iso_pu_bacteria 2824644064 2824648457 243
68 iso_pu_bacteria 2824714736 2824718315 243
69 iso_pu_bacteria 2824723954 2824728587 243
70 iso_pu_bacteria 8005682033 8005686902 243
71 3300028380 Ga0268265_10183072 Ga0268265_101830723 244
72 3300046694 Ga0495649_0154407 Ga0495649_0154407_24_785 245
73 iso_pu_bacteria 2501025502 2501082872 245
74 iso_pu_bacteria 2510917013 2511091138 245
75 iso_pu_bacteria 2513237082 2513555066 245
76 iso_pu_bacteria 2513237083 2513562431 245
77 iso_pu_bacteria 2515154189 2516020975 245
78 iso_pu_bacteria 2547132181 2547694918 245
79 iso_pu_bacteria 2561511199 2562466938 245
80 iso_pu_bacteria 2599185239 2599739764 245
81 iso_pu_bacteria 2600255256 2601533799 245
82 iso_pu_bacteria 2600255257 2601540980 245
83 iso_pu_bacteria 2600255310 2601759379 245
84 iso_pu_bacteria 2600255311 2601762601 245
85 iso_pu_bacteria 2602042046 2603640439 245
86 iso_pu_bacteria 2609459761 2609910423 245
87 iso_pu_bacteria 2744054900 2746084753 245
88 iso_pu_bacteria 2744054901 2746093096 245
89 iso_pu_bacteria 2747842428 2747949532 245
90 iso_pu_bacteria 2765235840 2765578060 245
91 iso_pu_bacteria 2811995292 2813730791 245
92 iso_pu_bacteria 2814123068 2814698407 245
93 iso_pu_bacteria 2842757796 2842759911 245
94 iso_pu_bacteria 2863421361 2863424295 245
95 iso_pu_bacteria 2883087390 2883090245 245
96 iso_pu_bacteria 2904483920 2904487053 245
97 iso_pu_bacteria 2904564687 2904567460 245
98 iso_pu_bacteria 2904571731 2904574505 245
99 iso_pu_bacteria 2919527303 2919528365 245
100 iso_pu_bacteria 2928536128 2928540376 245
101 iso_pu_bacteria 2945874760 2945878324 245
102 iso_pu_bacteria 642555113 642617386 245
103 iso_pu_bacteria 8003955200 8003956041 245
104 iso_pu_bacteria 8018845410 8018852769 245
105 iso_pu_bacteria 8020938398 8020942919 245
106 iso_pu_bacteria 8020953355 8020959599 245
107 iso_pu_bacteria 8021120328 8021123985 245
108 iso_pu_bacteria 8055301274 8055306755 245
109 3300006186 Ga0075369_10082865 Ga0075369_100828652 246
110 3300015685 Ga0183369_1003 Ga0183369_100344 246
111 3300038443 Ga0395901_0013738 Ga0395901_0013738_5192_5944 246
112 3300046665 Ga0495661_0001867 Ga0495661_0001867_15817_16557 246
113 3300046665 Ga0495661_0189916 Ga0495661_0189916_69_809 246
114 3300049574 Ga0501038_0252668 Ga0501038_0252668_87_830 246
115 3300049579 Ga0501043_0097214 Ga0501043_0097214_416_1156 246
116 3300049579 Ga0501043_0305611 Ga0501043_0305611_22_762 246
117 3300049822 Ga0501035_0307891 Ga0501035_0307891_562_1302 246
118 3300050516 nmdc:mga0sz30_25764_c1 nmdc:mga0sz30_25764_c1_426_1169 246
119 3300006353 Ga0075370_10064143 Ga0075370_100641432 247
120 3300009093 Ga0105240_10000005 Ga0105240_10000005182 247
121 3300009093 Ga0105240_10000639 Ga0105240_1000063958 247
122 3300009177 Ga0105248_10489630 Ga0105248_104896302 247
123 3300010375 Ga0105239_10002635 Ga0105239_1000263515 247
124 3300013104 Ga0157370_10000163 Ga0157370_1000016344 247
125 3300013105 Ga0157369_10244999 Ga0157369_102449992 247
126 3300025913 Ga0207695_10000011 Ga0207695_10000011732 247
127 3300025913 Ga0207695_10000591 Ga0207695_1000059155 247
128 3300025941 Ga0207711_10341448 Ga0207711_103414482 247
129 3300030500 Ga0268256_1005429 Ga0268256_10054293 247
130 3300031911 Ga0307412_10084778 Ga0307412_100847782 247
131 3300032005 Ga0307411_10354964 Ga0307411_103549641 247
132 3300046460 Ga0495638_0035246 Ga0495638_0035246_1258_2031 247
133 3300046515 Ga0495620_0131454 Ga0495620_0131454_148_921 247
134 3300048924 Ga0496121_0145470 Ga0496121_0145470_565_1308 247
135 3300048925 Ga0496122_0000595 Ga0496122_0000595_6921_7664 247
136 3300048926 Ga0496123_0000211 Ga0496123_0000211_40948_41691 247
137 3300048927 Ga0496124_0002131 Ga0496124_0002131_5804_6547 247
138 3300048928 Ga0496125_0007565 Ga0496125_0007565_3947_4690 247
139 3300050496 nmdc:mga07m45_200161_c1 nmdc:mga07m45_200161_c1_169_921 247
140 3300053090 Ga0500646_0006681 Ga0500646_0006681_995_1768 247
141 3300053093 Ga0500651_0035973 Ga0500651_0035973_1343_2116 247
142 3300053127 Ga0500623_124207 Ga0500623_124207_262_1035 247
143 3300053130 Ga0500642_0000739 Ga0500642_0000739_1182_1955 247
144 3300053131 Ga0500652_000678 Ga0500652_000678_1190_1963 247
145 3300053142 Ga0500577_0115907 Ga0500577_0115907_27_800 247
146 3300053151 Ga0500604_0047207 Ga0500604_0047207_303_1076 247
147 3300053156 Ga0500622_0000689 Ga0500622_0000689_27721_28494 247
148 3300003775 Ga0055524_1016485 Ga0055524_10164852 248
149 3300005289 Ga0065704_10079013 Ga0065704_100790131 248
150 3300005843 Ga0068860_100254094 Ga0068860_1002540941 248
151 3300025294 Ga0209025_1016132 Ga0209025_10161324 248
152 3300025299 Ga0209256_1000200 Ga0209256_1000200108 248
153 3300026116 Ga0207674_10066563 Ga0207674_100665632 248
154 3300028381 Ga0268264_10742598 Ga0268264_107425981 248
155 3300031901 Ga0307406_10126308 Ga0307406_101263082 248
156 3300044656 Ga0466969_0045530 Ga0466969_0045530_236_982 248
157 3300046528 Ga0495642_0000477 Ga0495642_0000477_18919_19698 248
158 3300047320 Ga0495672_0001726 Ga0495672_0001726_5020_5766 248
159 3300048922 Ga0496119_0003548 Ga0496119_0003548_9417_10163 248
160 3300048923 Ga0496120_0000015 Ga0496120_0000015_69419_70165 248
161 3300048927 Ga0496124_0005614 Ga0496124_0005614_12770_13516 248
162 3300048929 Ga0496126_0036398 Ga0496126_0036398_946_1692 248
163 iso_pu_bacteria 2808606384 2808967685 248
164 iso_pu_bacteria 2808606390 2809002516 248
165 iso_pu_bacteria 2808606391 2809009794 248
166 3300002737 JGI25162J39368_1000662 JGI25162J39368_100066223 249
167 3300002737 JGI25162J39368_1000845 JGI25162J39368_100084514 249
168 3300002772 JGI25164J39214_1000117 JGI25164J39214_100011715 249
169 3300003214 JGI25165J46597_1000235 JGI25165J46597_100023514 249
170 3300003316 rootH1_10036958 rootH1_100369584 249
171 3300003320 rootH2_10054390 rootH2_100543902 249
172 3300003320 rootH2_10253298 rootH2_102532984 249
173 3300003756 Ga0055533_1000104 Ga0055533_100010477 249
174 3300003758 Ga0055532_1000621 Ga0055532_10006217 249
175 3300003758 Ga0055532_1000651 Ga0055532_10006517 249
176 3300003760 Ga0055527_1000006 Ga0055527_100000678 249
177 3300003760 Ga0055527_1000152 Ga0055527_100015233 249
178 3300003760 Ga0055527_1001258 Ga0055527_10012584 249
179 3300003761 Ga0055535_1000003 Ga0055535_1000003379 249
180 3300003761 Ga0055535_1000314 Ga0055535_100031410 249
181 3300003762 Ga0055542_1000007 Ga0055542_1000007379 249
182 3300003762 Ga0055542_1000185 Ga0055542_10001854 249
183 3300003762 Ga0055542_1000342 Ga0055542_100034210 249
184 3300003763 Ga0055529_1000003 Ga0055529_100000378 249
185 3300003763 Ga0055529_1000210 Ga0055529_10002104 249
186 3300003763 Ga0055529_1000252 Ga0055529_100025246 249
187 3300003790 Ga0055528_1000688 Ga0055528_100068820 249
188 3300003856 Ga0058692_1015040 Ga0058692_10150402 249
189 3300005295 Ga0065707_10195598 Ga0065707_101955982 249
190 3300005343 Ga0070687_100443194 Ga0070687_1004431941 249
191 3300005617 Ga0068859_100055340 Ga0068859_1000553406 249
192 3300005618 Ga0068864_100304208 Ga0068864_1003042082 249
193 3300005841 Ga0068863_100574932 Ga0068863_1005749322 249
194 3300006931 Ga0097620_100055336 Ga0097620_1000553362 249
195 3300009093 Ga0105240_10001311 Ga0105240_100013113 249
196 3300009093 Ga0105240_10323009 Ga0105240_103230092 249
197 3300009148 Ga0105243_10021717 Ga0105243_100217172 249
198 3300009553 Ga0105249_10027841 Ga0105249_100278412 249
199 3300010375 Ga0105239_10027598 Ga0105239_100275984 249
200 3300013306 Ga0163162_10222024 Ga0163162_102220243 249
201 3300014325 Ga0163163_10108876 Ga0163163_101088762 249
202 3300015261 Ga0182006_1062028 Ga0182006_10620282 249
203 3300015262 Ga0182007_10007105 Ga0182007_100071056 249
204 3300021361 Ga0213872_10021500 Ga0213872_100215002 249
205 3300021384 Ga0213876_10000136 Ga0213876_1000013684 249
206 3300025226 Ga0209674_100025 Ga0209674_100025378 249
207 3300025228 Ga0209672_100002 Ga0209672_1000021270 249
208 3300025228 Ga0209672_100032 Ga0209672_100032275 249
209 3300025228 Ga0209672_100089 Ga0209672_1000894 249
210 3300025229 Ga0209147_100003 Ga0209147_1000031270 249
211 3300025229 Ga0209147_100012 Ga0209147_10001215 249
212 3300025229 Ga0209147_100063 Ga0209147_10006393 249
213 3300025230 Ga0209563_101417 Ga0209563_1014173 249
214 3300025231 Ga0207427_100051 Ga0207427_10005166 249
215 3300025231 Ga0207427_106440 Ga0207427_1064402 249
216 3300025233 Ga0209437_100152 Ga0209437_10015213 249
217 3300025242 Ga0209258_100005 Ga0209258_100005911 249
218 3300025242 Ga0209258_100030 Ga0209258_10003012 249
219 3300025242 Ga0209258_100101 Ga0209258_10010159 249
220 3300025246 Ga0209646_1023817 Ga0209646_10238171 249
221 3300025250 Ga0209026_1000572 Ga0209026_100057230 249
222 3300025253 Ga0209677_101839 Ga0209677_1018393 249
223 3300025254 Ga0209148_1000006 Ga0209148_10000061270 249
224 3300025254 Ga0209148_1000022 Ga0209148_1000022610 249
225 3300025254 Ga0209148_1000079 Ga0209148_1000079127 249
226 3300025254 Ga0209148_1000291 Ga0209148_100029151 249
227 3300025256 Ga0209759_1000014 Ga0209759_100001477 249
228 3300025256 Ga0209759_1000028 Ga0209759_100002817 249
229 3300025256 Ga0209759_1000667 Ga0209759_100066730 249
230 3300025256 Ga0209759_1002343 Ga0209759_10023439 249
231 3300025261 Ga0209233_1000018 Ga0209233_100001876 249
232 3300025261 Ga0209233_1000099 Ga0209233_1000099130 249
233 3300025263 Ga0209565_1010327 Ga0209565_10103272 249
234 3300025272 Ga0209455_1000003 Ga0209455_10000031270 249
235 3300025272 Ga0209455_1000016 Ga0209455_1000016128 249
236 3300025272 Ga0209455_1000024 Ga0209455_100002411 249
237 3300025273 Ga0209673_1000056 Ga0209673_100005651 249
238 3300025292 Ga0209676_1000225 Ga0209676_10002252 249
239 3300025295 Ga0209564_1014508 Ga0209564_10145082 249
240 3300025298 Ga0209050_1019685 Ga0209050_10196853 249
241 3300025303 Ga0209051_1020001 Ga0209051_10200012 249
242 3300025904 Ga0207647_10011609 Ga0207647_100116094 249
243 3300025913 Ga0207695_10000840 Ga0207695_100008403 249
244 3300025926 Ga0207659_10163541 Ga0207659_101635413 249
245 3300025935 Ga0207709_10017999 Ga0207709_100179994 249
246 3300026078 Ga0207702_10369074 Ga0207702_103690741 249
247 3300027312 Ga0209371_1000076 Ga0209371_100007689 249
248 3300027312 Ga0209371_1000161 Ga0209371_100016133 249
249 3300030500 Ga0268256_1000012 Ga0268256_1000012423 249
250 3300030500 Ga0268256_1000087 Ga0268256_100008749 249
251 3300030732 Ga0316176_1081342 Ga0316176_10813422 249
252 3300031852 Ga0307410_10197401 Ga0307410_101974011 249
253 3300032004 Ga0307414_10360233 Ga0307414_103602331 249
254 3300032004 Ga0307414_10419265 Ga0307414_104192652 249
255 3300032005 Ga0307411_10028235 Ga0307411_100282352 249
256 3300038705 Ga0237819_11759 Ga0237819_11759_21_770 249
257 3300039437 Ga0436365_0368505 Ga0436365_0368505_370691_371461 249
258 3300039447 Ga0436361_0080210 Ga0436361_0080210_3054_3803 249
259 3300044684 Ga0466966_0045366 Ga0466966_0045366_338_1087 249
260 3300044693 Ga0466961_0025874 Ga0466961_0025874_891_1640 249
261 3300044842 Ga0466957_0115105 Ga0466957_0115105_92_844 249
262 3300046454 Ga0495592_0007194 Ga0495592_0007194_5851_6600 249
263 3300046457 Ga0495590_0021347 Ga0495590_0021347_661_1410 249
264 3300046458 Ga0495591_004866 Ga0495591_004866_5421_6170 249
265 3300046459 Ga0495629_0011441 Ga0495629_0011441_1075_1824 249
266 3300046459 Ga0495629_0024763 Ga0495629_0024763_1037_1786 249
267 3300046461 Ga0495641_0035321 Ga0495641_0035321_88_837 249
268 3300046462 Ga0495651_0032280 Ga0495651_0032280_937_1686 249
269 3300046462 Ga0495651_0071281 Ga0495651_0071281_1443_2192 249
270 3300046463 Ga0495653_0018248 Ga0495653_0018248_4082_4831 249
271 3300046471 Ga0495650_0081718 Ga0495650_0081718_173_922 249
272 3300046472 Ga0495580_0005811 Ga0495580_0005811_4082_4831 249
273 3300046472 Ga0495580_0007091 Ga0495580_0007091_2890_3639 249
274 3300046472 Ga0495580_0084547 Ga0495580_0084547_431_1180 249
275 3300046472 Ga0495580_0117373 Ga0495580_0117373_14_763 249
276 3300046477 Ga0495664_0010786 Ga0495664_0010786_2465_3214 249
277 3300046500 Ga0495596_0002466 Ga0495596_0002466_4279_5028 249
278 3300046506 Ga0495583_0000276 Ga0495583_0000276_63296_64045 249
279 3300046507 Ga0495606_0000487 Ga0495606_0000487_16412_17161 249
280 3300046511 Ga0495608_0001973 Ga0495608_0001973_6073_6822 249
281 3300046512 Ga0495610_0000210 Ga0495610_0000210_44561_45397 249
282 3300046514 Ga0495618_0017410 Ga0495618_0017410_989_1738 249
283 3300046516 Ga0495628_0005223 Ga0495628_0005223_4930_5679 249
284 3300046516 Ga0495628_0030020 Ga0495628_0030020_209_958 249
285 3300046516 Ga0495628_0169747 Ga0495628_0169747_633_1382 249
286 3300046516 Ga0495628_0274785 Ga0495628_0274785_360_1109 249
287 3300046517 Ga0495630_0033417 Ga0495630_0033417_340_1089 249
288 3300046518 Ga0495631_0000076 Ga0495631_0000076_18541_19377 249
289 3300046524 Ga0495648_0006327 Ga0495648_0006327_4007_4756 249
290 3300046525 Ga0495663_0003636 Ga0495663_0003636_2293_3042 249
291 3300046526 Ga0495666_0002710 Ga0495666_0002710_1218_1967 249
292 3300046526 Ga0495666_0006302 Ga0495666_0006302_286_1035 249
293 3300046529 Ga0495652_0013882 Ga0495652_0013882_4215_4964 249
294 3300046529 Ga0495652_0014630 Ga0495652_0014630_1209_1958 249
295 3300046531 Ga0495665_0004185 Ga0495665_0004185_4766_5515 249
296 3300046531 Ga0495665_0008869 Ga0495665_0008869_3323_4072 249
297 3300046533 Ga0495640_0015353 Ga0495640_0015353_2880_3629 249
298 3300046533 Ga0495640_0044129 Ga0495640_0044129_1904_2653 249
299 3300046542 Ga0495597_0134951 Ga0495597_0134951_100_849 249
300 3300046543 Ga0495645_0019038 Ga0495645_0019038_226_975 249
301 3300046558 Ga0495633_0000328 Ga0495633_0000328_18851_19600 249
302 3300046559 Ga0495667_0105015 Ga0495667_0105015_37_786 249
303 3300046642 Ga0495634_0009679 Ga0495634_0009679_1209_1958 249
304 3300046642 Ga0495634_0190484 Ga0495634_0190484_46_795 249
305 3300046660 Ga0495625_0002958 Ga0495625_0002958_16748_17497 249
306 3300046660 Ga0495625_0283365 Ga0495625_0283365_82_855 249
307 3300046663 Ga0495635_0070910 Ga0495635_0070910_553_1302 249
308 3300046678 Ga0495599_0342487 Ga0495599_0342487_94_861 249
309 3300046679 Ga0495623_0012497 Ga0495623_0012497_2812_3561 249
310 3300046680 Ga0495646_0003279 Ga0495646_0003279_5015_5764 249
311 3300046680 Ga0495646_0054172 Ga0495646_0054172_1131_1898 249
312 3300046689 Ga0495613_0090400 Ga0495613_0090400_1284_2033 249
313 3300046690 Ga0495624_0000143 Ga0495624_0000143_4679_5428 249
314 3300046690 Ga0495624_0001622 Ga0495624_0001622_6259_7008 249
315 3300046690 Ga0495624_0035764 Ga0495624_0035764_761_1510 249
316 3300046692 Ga0495671_0052017 Ga0495671_0052017_997_1746 249
317 3300046694 Ga0495649_0000651 Ga0495649_0000651_16735_17484 249
318 3300046694 Ga0495649_0006108 Ga0495649_0006108_395_1144 249
319 3300046694 Ga0495649_0017166 Ga0495649_0017166_3316_4065 249
320 3300046794 Ga0495589_0020066 Ga0495589_0020066_1391_2140 249
321 3300046794 Ga0495589_0079202 Ga0495589_0079202_310_1059 249
322 3300046794 Ga0495589_0099257 Ga0495589_0099257_362_1111 249
323 3300046809 Ga0495600_0127517 Ga0495600_0127517_344_1093 249
324 3300046810 Ga0495660_0004038 Ga0495660_0004038_4648_5484 249
325 3300047315 Ga0495581_0028502 Ga0495581_0028502_761_1510 249
326 3300047317 Ga0495604_0000321 Ga0495604_0000321_17397_18146 249
327 3300047317 Ga0495604_0004786 Ga0495604_0004786_4612_5361 249
328 3300047317 Ga0495604_0064820 Ga0495604_0064820_944_1693 249
329 3300047319 Ga0495674_0006553 Ga0495674_0006553_5228_5977 249
330 3300047320 Ga0495672_0036776 Ga0495672_0036776_970_1719 249
331 3300047321 Ga0495676_0164831 Ga0495676_0164831_183_932 249
332 3300047322 Ga0495680_0005562 Ga0495680_0005562_5087_5836 249
333 3300047322 Ga0495680_0017296 Ga0495680_0017296_4469_5218 249
334 3300047322 Ga0495680_0034473 Ga0495680_0034473_2204_2953 249
335 3300047323 Ga0495683_0000990 Ga0495683_0000990_15631_16380 249
336 3300047323 Ga0495683_0029290 Ga0495683_0029290_1218_1967 249
337 3300047444 Ga0495675_0031472 Ga0495675_0031472_1208_1957 249
338 3300047444 Ga0495675_0040042 Ga0495675_0040042_1883_2632 249
339 3300047444 Ga0495675_0059424 Ga0495675_0059424_731_1480 249
340 3300047446 Ga0495679_001373 Ga0495679_001373_3883_4632 249
341 3300047471 Ga0495684_0082676 Ga0495684_0082676_1658_2407 249
342 3300047472 Ga0495686_0000548 Ga0495686_0000548_42461_43210 249
343 3300047472 Ga0495686_0023385 Ga0495686_0023385_1372_2130 249
344 3300047673 Ga0495593_0024411 Ga0495593_0024411_1871_2620 249
345 3300047673 Ga0495593_0026673 Ga0495593_0026673_1152_1901 249
346 3300048088 Ga0495602_0001405 Ga0495602_0001405_5120_5887 249
347 3300048088 Ga0495602_0006361 Ga0495602_0006361_4917_5666 249
348 3300048088 Ga0495602_0051575 Ga0495602_0051575_482_1231 249
349 3300048088 Ga0495602_0066537 Ga0495602_0066537_89_838 249
350 3300048089 Ga0495614_0002758 Ga0495614_0002758_5541_6290 249
351 3300048091 Ga0495626_0029415 Ga0495626_0029415_1048_1797 249
352 3300048921 Ga0496118_0002064 Ga0496118_0002064_12275_13024 249
353 3300048925 Ga0496122_0187862 Ga0496122_0187862_335_1084 249
354 3300048929 Ga0496126_0000164 Ga0496126_0000164_46575_47324 249
355 3300048929 Ga0496126_0000272 Ga0496126_0000272_79882_80631 249
356 3300048929 Ga0496126_0027098 Ga0496126_0027098_2834_3583 249
357 3300049822 Ga0501035_0481039 Ga0501035_0481039_116_868 249
358 3300053147 Ga0500589_099796 Ga0500589_099796_338_1087 249

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

27

208

0.93

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

33

211

0.91

PF08659

KR

KR domain

27

186

0.88

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

29

195

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
8g93-assembly1.cif.gz_A crystal structures of 17-beta-hydroxysteroid dehydrogenase 13 0.9227 2 171
5u4s-assembly1.cif.gz_A crystal structure of a short chain dehydrogenase from burkholderia cenocepacia j2315 in complex with nadp. 0.915 2 246
1w8d-assembly1.cif.gz_D binary structure of human decr. 0.9046 2 171
1w6u-assembly1.cif.gz_D structure of human decr ternary complex 0.9046 2 171
5u4s-assembly1.cif.gz_B crystal structure of a short chain dehydrogenase from burkholderia cenocepacia j2315 in complex with nadp. 0.9031 2 247
ID Description Score Start End Superfamily
af_F4J128_251_373_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9673 76 174 3.40.50.720
af_Q2QLP7_18_222_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9456 2 174 3.40.50.720
af_Q54WA9_4_295_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9111 2 247 3.40.50.720
af_Q09486_28_272_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9107 1 172 3.40.50.720
5xtfA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9107 1 173 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A436QX60-F1-model_v4 SDR family NAD(P)-dependent oxidoreductase 0.9973 1 164 GO:0000140
GO:0004806
GO:0005811
GO:0006654
GO:0019433
AF-A0A2I8QSY0-F1-model_v4 deleted 0.9929 1 248
AF-A0A7Y9YS30-F1-model_v4 deleted 0.9927 1 248
AF-V5TZ21-F1-model_v4 Short-chain dehydrogenase/reductase 0.9903 29 248 GO:0016491
AF-A0A829XTV3-F1-model_v4 deleted 0.9889 32 249

Feature Viewer

pLDDT pTM Quality
93.22 0.92 High
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Predicted Structure (AlphaFold2)

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