F421046

General Info

Members Datasets Scaffolds Average Seq Length
358 245 322 411

Family's Representative Sequence

Representative Sequence 3300003187|JGI25151J46595_10000072|JGI25151J46595_1000007251
Length 454
Sequence MAHGRLDRLPRAPVKANPAVGISPAAAGRPQPPGLAANLAIAMNDMSAIARPRHGMGFYPFVGLTAALMATNALAIDSMLPALPQMAEALGIAEANQRQWIITAYLLGFGISQIFYGTISDRFGRRPVLITGLAVYVVASIAAAFAGSFEAMMAARVLQGIGAAATRVLVVSIVRDCYSGREMARVMSLAMIVFLAVPILAPSIGQAILWVAPWRWIFGVLTSFGAIVMIWVLLKLPETQHPEDRKPIEPASVLASFRTTLTSRIGVGYMLAMAFVLGGLFGFINSAQQVFVDVFHAPELFTTIFALIAMFMAASSLLNSRIVGKLGMRRVSHGALLGYIALTGIHALVALAGHESLWSFAILQGGAMFCFGLIGPNFGAMAMEPLGHVAGTASSVQGFVTTVIGALLGFYIGQHFNGTVVPLTLGFALCGLAALVVVLIVERGRLFHPAPGRS

Samples

Sample ID Description Type Environment
1 2162886006 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v1 Metagenome Rhizosphere
2 2510917020 Caulobacter sp. AP07 Isolate Rhizosphere
3 2582581279 Caulobacter henricii OK261 Isolate Rhizosphere
4 2582581280 Caulobacter henricii CF287 Isolate Rhizosphere
5 2582581293 Caulobacter henricii YR570 Isolate Rhizosphere
6 2585428106 Caulobacter sp. OV484 Isolate Rhizosphere
7 2600255279 Rhizobium sp. NFIX01 Isolate Rhizoplane
8 2600255308 Rhizobium sp. NFIX02 Isolate Rhizoplane
9 2643221545 Caulobacter sp. Root1455 Isolate Unclassified
10 2643221552 Caulobacter sp. Root1472 Isolate Unclassified
11 2643221583 Caulobacter sp. Root655 Isolate Unclassified
12 2643221584 Caulobacter sp. Root656 Isolate Unclassified
13 2643221640 Caulobacter sp. Root342 Isolate Unclassified
14 2643221642 Caulobacter sp. Root343 Isolate Unclassified
15 2643221691 Caulobacter sp. Root487D2Y Isolate Unclassified
16 2643221733 Bosea sp. Root381 Isolate Unclassified
17 2643221734 Bosea sp. Root670 Isolate Unclassified
18 2808606387 Rhizobium sp. SJZ105 Isolate Rhizosphere
19 2818991435 Caulobacter henricii 536 Isolate Unclassified
20 2818991454 Caulobacter rhizosphaerae 3260 Isolate Rhizosphere
21 2818991467 Bosea vestrisii 3192 Isolate Unclassified
22 2841911363 Bosea caraganae RCAM04685 Isolate Nodule
23 2841917233 Bosea caraganae RCAM04680 Isolate Nodule
24 2842775625 Roseomonas sp. R-71825 Isolate Unclassified
25 2857504554 Caulobacter sp. R-72291 Isolate Unclassified
26 2899845264 Agrobacterium fabacearum CNPSo 675 Isolate Unclassified
27 2917699015 Bosea sp. F3-2 Isolate Rhizosphere
28 2919450847 Ancylobacter sp. 3268 Isolate Rhizosphere
29 2926760298 Agrobacterium tumefaciens SLBN-170 Isolate Rhizosphere
30 2928531327 Caulobacter sp. 1776 Isolate Rhizosphere
31 2933594066 Agrobacterium fabrum 35/80 Isolate Nodule
32 2978969890 Agrobacterium sp. SORGH_AS 787 Isolate Unclassified
33 2979089926 Agrobacterium sp. SORGH_AS 745 Isolate Unclassified
34 2979095461 Agrobacterium tumefaciens SORGH_AS 749 Isolate Unclassified
35 2984587000 Agrobacterium larrymoorei SORGH_AS974 Isolate Aerial Root
36 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
37 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
38 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
39 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
40 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
41 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
42 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
43 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
44 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
45 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
46 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
47 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
48 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
49 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
50 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
51 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
52 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
53 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
54 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
55 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
56 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
57 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
58 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
59 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
60 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
61 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
62 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
63 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
64 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
65 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
66 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
67 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
68 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
69 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
70 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
71 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
72 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
73 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
74 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
75 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
76 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
77 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
78 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
79 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
80 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
81 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
82 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
83 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
84 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
85 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
86 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
87 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
88 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
89 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
90 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
91 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
92 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
93 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
94 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
95 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
96 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
97 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
98 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
99 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
100 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
101 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
102 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
103 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
104 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
105 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
106 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
107 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
108 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
109 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
110 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
111 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
112 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
113 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
114 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
115 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
116 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
117 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
118 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
119 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
120 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
121 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
122 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
138 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
139 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
140 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
141 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
142 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
143 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
144 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
145 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
146 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
147 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
148 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
149 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
150 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
151 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
152 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
153 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
154 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
155 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
156 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
157 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
158 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
159 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
160 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
161 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
162 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
163 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
164 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
165 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
166 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
167 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
168 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
169 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
170 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
171 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
172 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
173 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
174 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
175 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
176 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
177 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
178 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
179 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
180 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
181 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
182 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
183 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
184 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
185 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
186 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
187 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
188 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
189 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
190 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
191 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
192 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
193 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
194 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
195 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
196 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
197 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
198 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
199 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
200 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
201 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
202 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
203 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
204 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
205 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
206 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
207 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
208 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
209 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
210 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
211 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
212 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
213 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
214 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
215 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
216 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
217 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
218 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
219 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
220 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
221 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
222 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
223 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
224 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
225 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
226 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
227 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
228 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
229 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
230 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
231 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
232 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
233 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
234 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
235 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
236 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
237 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
238 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
239 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
240 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
241 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
242 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
243 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
244 650716007 Agrobacterium fabacearum H13-3 Isolate Rhizosphere
245 8001845381 Ancylobacter sonchi VKM B-3145 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 89.94
Metatranscriptomes 0
Isolates 10.06

Biome Distribution

Category Percentage (%)
Aerial Root 0.28
Bulb 0
Endosphere 20.67
Nodule 0.84
Rhizoplane 1.4
Rhizosphere 62.85
Stem 0
Stem Tuber 0
Unclassified 13.97

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL3b_contig_2096357 2162886006 Bacteria 2242
2 JGI24736J21556_1004012 3300001904 Bacteria 2532
3 JGI24739J22299_10000621 3300001989 Bacteria 12732
4 JGI24739J22299_10009934 3300001989 Bacteria 3538
5 JGI24739J22299_10012214 3300001989 Bacteria 3154
6 JGI24737J22298_10002321 3300001990 Bacteria 6780
7 JGI24737J22298_10003311 3300001990 Bacteria 5707
8 JGI24737J22298_10025635 3300001990 Bacteria 1863
9 JGI24735J21928_10002025 3300002067 Bacteria 7135
10 JGI24735J21928_10003266 3300002067 Bacteria 5548
11 JGI24735J21928_10006581 3300002067 Bacteria 3819
12 JGI24735J21928_10007889 3300002067 Bacteria 3459
13 JGI24735J21928_10018068 3300002067 Bacteria 2176
14 JGI24738J21930_10000144 3300002075 Bacteria 17491
15 JGI24738J21930_10002127 3300002075 Bacteria 5288
16 JGI25151J46595_10000072 3300003187 Bacteria 136769
17 JGI25165J46597_1000023 3300003214 Bacteria 338873
18 JGI25153J46596_10012526 3300003215 Bacteria 3651
19 Ga0055542_1002363 3300003762 Bacteria 6403
20 Ga0055526_1000090 3300003771 Bacteria 83051
21 Ga0055526_1002908 3300003771 Bacteria 11255
22 Ga0055537_1001160 3300003773 Bacteria 11272
23 Ga0055524_1000096 3300003775 Bacteria 108231
24 Ga0055524_1007001 3300003775 Bacteria 4844
25 Ga0055536_1002369 3300003781 Bacteria 10648
26 Ga0055528_1009490 3300003790 Bacteria 4057
27 Ga0055530_10002819 3300003791 Bacteria 10674
28 Ga0055530_10003296 3300003791 Bacteria 9357
29 Ga0055531_10003434 3300003794 Bacteria 10107
30 Ga0055531_10007638 3300003794 Bacteria 5854
31 Ga0065165_1001166 3300005262 Bacteria 30553
32 Ga0065707_10000499 3300005295 Bacteria 40457
33 Ga0070658_10000143 3300005327 Bacteria 63183
34 Ga0070676_10000104 3300005328 Bacteria 30258
35 Ga0070676_10052452 3300005328 Bacteria 2398
36 Ga0068869_100001148 3300005334 Bacteria 15451
37 Ga0068868_100000073 3300005338 Bacteria 58910
38 Ga0070660_100001899 3300005339 Bacteria 14398
39 Ga0070660_100002166 3300005339 Bacteria 13532
40 Ga0070660_100008686 3300005339 Bacteria 7113
41 Ga0070668_100000111 3300005347 Bacteria 50557
42 Ga0070668_100041477 3300005347 Bacteria 3526
43 Ga0070675_100002808 3300005354 Bacteria 13122
44 Ga0070671_100000130 3300005355 Bacteria 48553
45 Ga0070671_100061501 3300005355 Bacteria 3128
46 Ga0070673_100000047 3300005364 Bacteria 50070
47 Ga0070659_100115336 3300005366 Bacteria 2171
48 Ga0070663_100001168 3300005455 Bacteria 14462
49 Ga0070662_100002155 3300005457 Bacteria 12054
50 Ga0068867_100000119 3300005459 Bacteria 50149
51 Ga0068853_100036574 3300005539 Bacteria 4177
52 Ga0068853_100068567 3300005539 Bacteria 3084
53 Ga0070672_100019253 3300005543 Bacteria 4951
54 Ga0070665_100207311 3300005548 Bacteria 1961
55 Ga0068855_100000207 3300005563 Bacteria 75310
56 Ga0068855_100216471 3300005563 Bacteria 2150
57 Ga0068854_100000150 3300005578 Bacteria 48471
58 Ga0068856_100050074 3300005614 Bacteria 4117
59 Ga0068856_100065701 3300005614 Bacteria 3585
60 Ga0068852_100001402 3300005616 Bacteria 16223
61 Ga0068859_100058130 3300005617 Bacteria 3895
62 Ga0068863_100000171 3300005841 Bacteria 69589
63 Ga0068860_100024255 3300005843 Bacteria 5864
64 Ga0068862_100026403 3300005844 Bacteria 4881
65 Ga0068862_100040678 3300005844 Bacteria 3952
66 Ga0081455_10105352 3300005937 Bacteria 2254
67 Ga0075365_10151133 3300006038 Bacteria 1615
68 Ga0075369_10003655 3300006186 Bacteria 5618
69 Ga0075366_10045380 3300006195 Bacteria 2604
70 Ga0068865_100000005 3300006881 Bacteria 213248
71 Ga0097620_100058130 3300006931 Bacteria 3895
72 Ga0105240_10008063 3300009093 Bacteria 15149
73 Ga0105240_10152363 3300009093 Bacteria 2752
74 Ga0105245_10000281 3300009098 Bacteria 48386
75 Ga0105243_10000411 3300009148 Bacteria 44928
76 Ga0105242_10000752 3300009176 Bacteria 25259
77 Ga0105248_10029116 3300009177 Bacteria 6158
78 Ga0105237_10000873 3300009545 Bacteria 40910
79 Ga0105237_10225200 3300009545 Bacteria 1876
80 Ga0105238_10098985 3300009551 Bacteria 2899
81 Ga0105238_10290749 3300009551 Bacteria 1616
82 Ga0105249_10026176 3300009553 Bacteria 5254
83 Ga0105239_10039806 3300010375 Bacteria 5150
84 Ga0105239_10044756 3300010375 Bacteria 4851
85 Ga0105239_10210035 3300010375 Bacteria 2182
86 Ga0105246_10001218 3300011119 Bacteria 15076
87 Ga0157373_10104194 3300013100 Bacteria 1995
88 Ga0157370_10000611 3300013104 Bacteria 44454
89 Ga0157369_10034614 3300013105 Bacteria 5541
90 Ga0171462_1029 3300013250 Bacteria 110139
91 Ga0157374_10001017 3300013296 Bacteria 24339
92 Ga0157378_10001127 3300013297 Bacteria 24339
93 Ga0163162_10118914 3300013306 Bacteria 2745
94 Ga0157372_10089241 3300013307 Bacteria 3502
95 Ga0157372_10115946 3300013307 Bacteria 3071
96 Ga0157372_10367006 3300013307 Bacteria 1677
97 Ga0157375_10012062 3300013308 Bacteria 7655
98 Ga0157380_10013683 3300014326 Bacteria 5923
99 Ga0157377_10004026 3300014745 Bacteria 6703
100 Ga0157376_10002783 3300014969 Bacteria 11944
101 Ga0207427_101360 3300025231 Bacteria 9029
102 Ga0209026_1010216 3300025250 Bacteria 1768
103 Ga0209148_1000208 3300025254 Bacteria 103781
104 Ga0209148_1004363 3300025254 Bacteria 3507
105 Ga0209233_1000003 3300025261 Bacteria 1607366
106 Ga0209565_1000090 3300025263 Bacteria 146540
107 Ga0209455_1000467 3300025272 Bacteria 30363
108 Ga0209673_1001205 3300025273 Bacteria 27580
109 Ga0209675_1001067 3300025291 Bacteria 16975
110 Ga0209675_1009001 3300025291 Bacteria 3583
111 Ga0209676_1000272 3300025292 Bacteria 107765
112 Ga0209676_1001368 3300025292 Bacteria 23929
113 Ga0209025_1000187 3300025294 Bacteria 154788
114 Ga0209564_1000043 3300025295 Bacteria 388153
115 Ga0209564_1000052 3300025295 Bacteria 356578
116 Ga0209564_1001454 3300025295 Bacteria 24131
117 Ga0209758_1001797 3300025297 Bacteria 23679
118 Ga0209758_1005397 3300025297 Bacteria 9883
119 Ga0209050_1001189 3300025298 Bacteria 30604
120 Ga0209050_1024290 3300025298 Bacteria 2102
121 Ga0209256_1000099 3300025299 Bacteria 203782
122 Ga0209256_1000374 3300025299 Bacteria 71875
123 Ga0209256_1002546 3300025299 Bacteria 14592
124 Ga0209256_1003960 3300025299 Bacteria 9738
125 Ga0209051_1010450 3300025303 Bacteria 4682
126 Ga0209257_1000247 3300025304 Bacteria 125419
127 Ga0209257_1002611 3300025304 Bacteria 17440
128 Ga0209257_1033013 3300025304 Bacteria 1633
129 Ga0207688_10021428 3300025901 Bacteria 3530
130 Ga0207647_10001549 3300025904 Bacteria 17685
131 Ga0207647_10003064 3300025904 Bacteria 12561
132 Ga0207645_10001707 3300025907 Bacteria 17826
133 Ga0207645_10082813 3300025907 Bacteria 2057
134 Ga0207705_10000046 3300025909 Bacteria 177574
135 Ga0207705_10000299 3300025909 Bacteria 46209
136 Ga0207705_10004105 3300025909 Bacteria 11042
137 Ga0207695_10012729 3300025913 Bacteria 10073
138 Ga0207695_10097980 3300025913 Bacteria 2932
139 Ga0207671_10006357 3300025914 Bacteria 10537
140 Ga0207657_10002404 3300025919 Bacteria 20242
141 Ga0207657_10004579 3300025919 Bacteria 14613
142 Ga0207657_10009479 3300025919 Bacteria 9781
143 Ga0207657_10089173 3300025919 Bacteria 2577
144 Ga0207657_10177483 3300025919 Bacteria 1723
145 Ga0207694_10181861 3300025924 Bacteria 1705
146 Ga0207659_10006856 3300025926 Bacteria 7006
147 Ga0207687_10001504 3300025927 Bacteria 15964
148 Ga0207644_10001181 3300025931 Bacteria 16772
149 Ga0207690_10010446 3300025932 Bacteria 5518
150 Ga0207690_10016126 3300025932 Bacteria 4543
151 Ga0207706_10005434 3300025933 Bacteria 11875
152 Ga0207686_10003818 3300025934 Bacteria 8082
153 Ga0207709_10000051 3300025935 Bacteria 227968
154 Ga0207704_10000001 3300025938 Bacteria 716296
155 Ga0207691_10008322 3300025940 Bacteria 9963
156 Ga0207689_10001171 3300025942 Bacteria 25256
157 Ga0207667_10000024 3300025949 Bacteria 355874
158 Ga0207667_10055490 3300025949 Bacteria 4165
159 Ga0207651_10000006 3300025960 Bacteria 227893
160 Ga0207668_10000136 3300025972 Bacteria 50579
161 Ga0207668_10003623 3300025972 Bacteria 9070
162 Ga0207640_10001061 3300025981 Bacteria 15212
163 Ga0207677_10000156 3300026023 Bacteria 54081
164 Ga0207639_10004624 3300026041 Bacteria 9266
165 Ga0207639_10028805 3300026041 Bacteria 4059
166 Ga0207639_10038530 3300026041 Bacteria 3556
167 Ga0207639_10091973 3300026041 Bacteria 2430
168 Ga0207678_10002489 3300026067 Bacteria 16752
169 Ga0207702_10043661 3300026078 Bacteria 3765
170 Ga0207702_10161529 3300026078 Bacteria 2046
171 Ga0207641_10000001 3300026088 Bacteria 1180841
172 Ga0207648_10000363 3300026089 Bacteria 50049
173 Ga0207683_10011268 3300026121 Bacteria 7622
174 Ga0207698_10000590 3300026142 Bacteria 21162
175 Ga0268266_10166520 3300028379 Bacteria 1997
176 Ga0268265_10079463 3300028380 Bacteria 2583
177 Ga0268264_10006155 3300028381 Bacteria 10136
178 Ga0307515_10015479 3300028794 Bacteria 14050
179 Ga0307408_100008992 3300031548 Bacteria 6598
180 Ga0307405_10033833 3300031731 Bacteria 3036
181 Ga0307412_10005784 3300031911 Bacteria 6952
182 Ga0307416_100019305 3300032002 Bacteria 4829
183 Ga0307510_10182413 3300033180 Bacteria 1660
184 Ga0395899_0007362 3300037312 Bacteria 8512
185 Ga0395905_0234081 3300037471 Unclassified 1717
186 Ga0395901_0342900 3300038443 Bacteria 1543
187 Ga0436361_0175668 3300039447 Bacteria 5135
188 Ga0439441_005549 3300042001 Bacteria 1968
189 Ga0439448_0000540 3300042005 Bacteria 8806
190 Ga0439448_0002183 3300042005 Bacteria 5283
191 Ga0439446_0008678 3300042156 Bacteria 2706
192 Ga0439458_0000885 3300042157 Bacteria 7743
193 Ga0439458_0003514 3300042157 Bacteria 3660
194 Ga0439458_0013471 3300042157 Bacteria 1839
195 Ga0466972_0000694 3300044658 Bacteria 16120
196 Ga0466965_0012664 3300044683 Bacteria 3972
197 Ga0466966_0163641 3300044684 Bacteria 1354
198 Ga0466961_0002863 3300044693 Bacteria 10702
199 Ga0466963_0025503 3300044694 Bacteria 3771
200 Ga0466964_0008501 3300044706 Bacteria 3859
201 Ga0466970_0006258 3300044765 Bacteria 5941
202 Ga0466957_0025022 3300044842 Bacteria 3536
203 Ga0466957_0038103 3300044842 Bacteria 2896
204 Ga0466960_0015150 3300044901 Bacteria 3319
205 Ga0466959_0115792 3300045049 Bacteria 1909
206 Ga0466958_0045526 3300045836 Bacteria 2647
207 Ga0466967_0044741 3300045976 Bacteria 3842
208 Ga0495627_000293 3300046453 Bacteria 49472
209 Ga0495590_0003700 3300046457 Bacteria 6221
210 Ga0495638_0000293 3300046460 Bacteria 65718
211 Ga0495638_0000341 3300046460 Bacteria 58907
212 Ga0495638_0000607 3300046460 Bacteria 40083
213 Ga0495638_0002114 3300046460 Bacteria 16761
214 Ga0495638_0010899 3300046460 Bacteria 6286
215 Ga0495650_0000190 3300046471 Bacteria 133426
216 Ga0495583_0000003 3300046506 Bacteria 709273
217 Ga0495583_0000247 3300046506 Bacteria 89254
218 Ga0495606_0041589 3300046507 Bacteria 3081
219 Ga0495606_0042280 3300046507 Bacteria 3049
220 Ga0495610_0000179 3300046512 Bacteria 70587
221 Ga0495610_0000616 3300046512 Bacteria 35186
222 Ga0495616_0000078 3300046513 Bacteria 83372
223 Ga0495616_0076658 3300046513 Bacteria 1606
224 Ga0495620_0019881 3300046515 Bacteria 3290
225 Ga0495631_0001585 3300046518 Bacteria 13667
226 Ga0495632_0000274 3300046519 Bacteria 50637
227 Ga0495632_0053238 3300046519 Bacteria 1988
228 Ga0495648_0000317 3300046524 Bacteria 53355
229 Ga0495654_0000016 3300046530 Bacteria 306416
230 Ga0495654_0030721 3300046530 Bacteria 2732
231 Ga0495654_0112838 3300046530 Bacteria 1238
232 Ga0495597_0054005 3300046542 Bacteria 1765
233 Ga0495668_0016909 3300046616 Bacteria 4236
234 Ga0495668_0035688 3300046616 Bacteria 2786
235 Ga0495625_0000034 3300046660 Bacteria 225120
236 Ga0495625_0005077 3300046660 Bacteria 12177
237 Ga0495625_0005622 3300046660 Bacteria 11368
238 Ga0495625_0023546 3300046660 Bacteria 4702
239 Ga0495625_0046436 3300046660 Bacteria 3134
240 Ga0495661_0129262 3300046665 Bacteria 1386
241 Ga0495670_0021580 3300046691 Bacteria 3177
242 Ga0495670_0092197 3300046691 Bacteria 1551
243 Ga0495671_0023592 3300046692 Bacteria 3213
244 Ga0495589_0001954 3300046794 Bacteria 11676
245 Ga0495660_0032396 3300046810 Bacteria 2935
246 Ga0495660_0054927 3300046810 Bacteria 2157
247 Ga0495672_0000960 3300047320 Bacteria 29957
248 Ga0495683_0042716 3300047323 Bacteria 2285
249 Ga0495673_0000053 3300047469 Bacteria 254433
250 Ga0495673_0000370 3300047469 Bacteria 54131
251 Ga0495673_0001118 3300047469 Bacteria 23034
252 Ga0495686_0000199 3300047472 Bacteria 111876
253 Ga0495686_0000876 3300047472 Bacteria 38353
254 Ga0495686_0002699 3300047472 Bacteria 16263
255 Ga0495686_0003247 3300047472 Bacteria 14270
256 Ga0495686_0099457 3300047472 Bacteria 1756
257 Ga0496107_0000034 3300048910 Bacteria 91621
258 Ga0496115_0012054 3300048918 Bacteria 6500
259 Ga0496115_0267984 3300048918 Bacteria 1404
260 Ga0496117_0024677 3300048920 Bacteria 4745
261 Ga0496117_0024843 3300048920 Bacteria 4723
262 Ga0496117_0033438 3300048920 Bacteria 3887
263 Ga0496117_0033703 3300048920 Bacteria 3869
264 Ga0496117_0102017 3300048920 Bacteria 1812
265 Ga0496118_0008350 3300048921 Bacteria 10718
266 Ga0496118_0011610 3300048921 Bacteria 8574
267 Ga0496118_0023879 3300048921 Bacteria 5296
268 Ga0496119_0000083 3300048922 Bacteria 138403
269 Ga0496121_0000607 3300048924 Bacteria 67089
270 Ga0496121_0031775 3300048924 Bacteria 4815
271 Ga0496121_0086952 3300048924 Bacteria 2455
272 Ga0496122_0001683 3300048925 Bacteria 34269
273 Ga0496122_0003321 3300048925 Bacteria 21252
274 Ga0496122_0007143 3300048925 Bacteria 12523
275 Ga0496122_0025189 3300048925 Bacteria 5177
276 Ga0496122_0074107 3300048925 Bacteria 2410
277 Ga0496122_0076077 3300048925 Bacteria 2364
278 Ga0496123_0006206 3300048926 Bacteria 11665
279 Ga0496123_0035851 3300048926 Bacteria 3528
280 Ga0496123_0048488 3300048926 Bacteria 2857
281 Ga0496124_0050800 3300048927 Bacteria 3530
282 Ga0496124_0087715 3300048927 Bacteria 2545
283 Ga0496124_0102584 3300048927 Bacteria 2315
284 Ga0496124_0168738 3300048927 Bacteria 1698
285 Ga0496125_0003599 3300048928 Bacteria 18615
286 Ga0496126_0004394 3300048929 Bacteria 16902
287 Ga0496126_0066864 3300048929 Bacteria 3213
288 Ga0496126_0240200 3300048929 Bacteria 1514
289 Ga0495678_000397 3300049459 Bacteria 43960
290 Ga0501300_004042 3300049523 Bacteria 2181
291 Ga0501037_0003530 3300049573 Bacteria 11355
292 Ga0501047_0153445 3300049581 Bacteria 2178
293 Ga0501035_0255497 3300049822 Bacteria 1487
294 nmdc:mga0yw44_50960_c1 3300050492 Bacteria 2505
295 nmdc:mga0sz30_5987_c1 3300050516 Bacteria 4489
296 Ga0500578_0000168 3300053086 Bacteria 78140
297 Ga0500643_000366 3300053087 Bacteria 35720
298 Ga0500644_0000098 3300053088 Bacteria 54983
299 Ga0500644_0009203 3300053088 Bacteria 2635
300 Ga0500555_000542 3300053103 Bacteria 15099
301 Ga0500556_0000046 3300053104 Bacteria 130408
302 Ga0500556_0001272 3300053104 Bacteria 11512
303 Ga0500562_000719 3300053108 Bacteria 8026
304 Ga0500592_002076 3300053116 Bacteria 3228
305 Ga0500594_0000170 3300053118 Bacteria 16604
306 Ga0500608_000018 3300053122 Bacteria 76628
307 Ga0500618_013365 3300053125 Bacteria 2123
308 Ga0500658_0000955 3300053134 Bacteria 11805
309 Ga0500559_0000174 3300053136 Bacteria 50893
310 Ga0500559_0002115 3300053136 Bacteria 10572
311 Ga0500559_0002690 3300053136 Bacteria 9042
312 Ga0500564_000109 3300053138 Bacteria 21191
313 Ga0500616_0010126 3300053153 Bacteria 5665
314 Ga0500616_0032391 3300053153 Bacteria 2858
315 Ga0500622_0000949 3300053156 Bacteria 24653
316 Ga0500622_0004922 3300053156 Bacteria 8154
317 Ga0500622_0063497 3300053156 Bacteria 1879
318 Ga0500627_0000095 3300053158 Bacteria 29627
319 Ga0500634_0067439 3300053161 Bacteria 1882
320 Ga0500645_002159 3300053730 Bacteria 9011
321 Ga0500609_000360 3300053731 Bacteria 6747
322 Ga0466962_0003999 3300061719 Bacteria 7057

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300042156 Ga0439446_0008678 Ga0439446_0008678_1098_2321 330
2 3300053136 Ga0500559_0000174 Ga0500559_0000174_12566_13786 331
3 3300001990 JGI24737J22298_10025635 JGI24737J22298_100256351 335
4 3300003794 Ga0055531_10003434 Ga0055531_100034346 336
5 3300025304 Ga0209257_1000247 Ga0209257_100024772 336
6 3300046519 Ga0495632_0053238 Ga0495632_0053238_437_1660 338
7 3300047323 Ga0495683_0042716 Ga0495683_0042716_359_1582 338
8 3300042001 Ga0439441_005549 Ga0439441_005549_694_1914 344
9 3300046810 Ga0495660_0054927 Ga0495660_0054927_18_1238 347
10 3300013100 Ga0157373_10104194 Ga0157373_101041943 349
11 3300006038 Ga0075365_10151133 Ga0075365_101511332 350
12 3300050492 nmdc:mga0yw44_50960_c1 nmdc:mga0yw44_50960_c1_1114_2352 350
13 3300025298 Ga0209050_1024290 Ga0209050_10242902 352
14 3300046460 Ga0495638_0002114 Ga0495638_0002114_6350_7657 352
15 3300046513 Ga0495616_0000078 Ga0495616_0000078_11139_12446 352
16 3300046519 Ga0495632_0000274 Ga0495632_0000274_10471_11763 352
17 3300046691 Ga0495670_0021580 Ga0495670_0021580_146_1369 352
18 3300053731 Ga0500609_000360 Ga0500609_000360_4609_5916 352
19 3300042005 Ga0439448_0002183 Ga0439448_0002183_3305_4522 353
20 3300044684 Ga0466966_0163641 Ga0466966_0163641_33_1304 353
21 3300046530 Ga0495654_0112838 Ga0495654_0112838_84_1223 355
22 3300047469 Ga0495673_0000370 Ga0495673_0000370_19427_20629 356
23 3300005366 Ga0070659_100115336 Ga0070659_1001153362 358
24 3300006195 Ga0075366_10045380 Ga0075366_100453802 358
25 3300025932 Ga0207690_10016126 Ga0207690_100161264 358
26 3300042005 Ga0439448_0000540 Ga0439448_0000540_210_1481 358
27 3300042157 Ga0439458_0000885 Ga0439458_0000885_1030_2301 358
28 3300009545 Ga0105237_10225200 Ga0105237_102252002 360
29 3300039447 Ga0436361_0175668 Ga0436361_0175668_548_1813 360
30 3300053138 Ga0500564_000109 Ga0500564_000109_170_1408 362
31 3300044842 Ga0466957_0038103 Ga0466957_0038103_777_2045 365
32 3300045836 Ga0466958_0045526 Ga0466958_0045526_406_1674 365
33 3300046460 Ga0495638_0000607 Ga0495638_0000607_31012_32211 365
34 3300046524 Ga0495648_0000317 Ga0495648_0000317_32412_33614 365
35 3300046810 Ga0495660_0032396 Ga0495660_0032396_694_1932 365
36 3300001989 JGI24739J22299_10009934 JGI24739J22299_100099342 367
37 3300001989 JGI24739J22299_10012214 JGI24739J22299_100122142 367
38 3300002067 JGI24735J21928_10003266 JGI24735J21928_100032661 367
39 3300025299 Ga0209256_1000374 Ga0209256_100037438 367
40 3300025904 Ga0207647_10003064 Ga0207647_1000306410 367
41 3300042157 Ga0439458_0003514 Ga0439458_0003514_2193_3464 367
42 3300042157 Ga0439458_0013471 Ga0439458_0013471_301_1572 367
43 3300044658 Ga0466972_0000694 Ga0466972_0000694_13896_15167 367
44 3300044683 Ga0466965_0012664 Ga0466965_0012664_1270_2541 367
45 3300044694 Ga0466963_0025503 Ga0466963_0025503_1728_2996 367
46 3300044706 Ga0466964_0008501 Ga0466964_0008501_1651_2922 367
47 3300044765 Ga0466970_0006258 Ga0466970_0006258_458_1729 367
48 3300044901 Ga0466960_0015150 Ga0466960_0015150_33_1304 367
49 3300045976 Ga0466967_0044741 Ga0466967_0044741_1170_2438 367
50 3300061719 Ga0466962_0003999 Ga0466962_0003999_811_2079 367
51 3300005328 Ga0070676_10000104 Ga0070676_1000010415 368
52 3300005334 Ga0068869_100001148 Ga0068869_1000011488 368
53 3300005338 Ga0068868_100000073 Ga0068868_10000007338 368
54 3300005364 Ga0070673_100000047 Ga0070673_10000004723 368
55 3300005459 Ga0068867_100000119 Ga0068867_10000011929 368
56 3300006881 Ga0068865_100000005 Ga0068865_100000005202 368
57 3300025907 Ga0207645_10001707 Ga0207645_100017077 368
58 3300025927 Ga0207687_10001504 Ga0207687_100015046 368
59 3300025934 Ga0207686_10003818 Ga0207686_100038181 368
60 3300025935 Ga0207709_10000051 Ga0207709_1000005123 368
61 3300025938 Ga0207704_10000001 Ga0207704_10000001217 368
62 3300025942 Ga0207689_10001171 Ga0207689_100011716 368
63 3300025960 Ga0207651_10000006 Ga0207651_1000000622 368
64 3300026023 Ga0207677_10000156 Ga0207677_1000015622 368
65 3300026089 Ga0207648_10000363 Ga0207648_1000036329 368
66 3300053088 Ga0500644_0000098 Ga0500644_0000098_20139_21377 368
67 3300002067 JGI24735J21928_10018068 JGI24735J21928_100180682 369
68 3300025919 Ga0207657_10089173 Ga0207657_100891732 369
69 3300047469 Ga0495673_0001118 Ga0495673_0001118_15861_17138 370
70 iso_pu_bacteria 2510917020 2511120500 370
71 iso_pu_bacteria 2643221584 2643932088 370
72 iso_pu_bacteria 2818991435 2819538133 370
73 iso_pu_bacteria 2818991454 2819647297 370
74 3300044842 Ga0466957_0025022 Ga0466957_0025022_1625_2944 371
75 3300048925 Ga0496122_0074107 Ga0496122_0074107_695_1933 371
76 iso_pu_bacteria 2643221583 2643922555 371
77 3300046513 Ga0495616_0076658 Ga0495616_0076658_365_1564 372
78 3300049459 Ga0495678_000397 Ga0495678_000397_9495_10694 372
79 3300049581 Ga0501047_0153445 Ga0501047_0153445_825_2036 372
80 3300053086 Ga0500578_0000168 Ga0500578_0000168_58942_60141 372
81 3300053118 Ga0500594_0000170 Ga0500594_0000170_3510_4709 372
82 3300047472 Ga0495686_0099457 Ga0495686_0099457_109_1326 373
83 3300048918 Ga0496115_0267984 Ga0496115_0267984_165_1382 373
84 3300047472 Ga0495686_0003247 Ga0495686_0003247_7866_9068 374
85 3300048922 Ga0496119_0000083 Ga0496119_0000083_120020_121216 374
86 3300048925 Ga0496122_0003321 Ga0496122_0003321_15755_16951 374
87 3300053104 Ga0500556_0000046 Ga0500556_0000046_38920_40116 374
88 3300003773 Ga0055537_1001160 Ga0055537_10011606 375
89 3300003790 Ga0055528_1009490 Ga0055528_10094902 375
90 3300005262 Ga0065165_1001166 Ga0065165_100116623 375
91 3300025263 Ga0209565_1000090 Ga0209565_100009024 375
92 3300025273 Ga0209673_1001205 Ga0209673_100120526 375
93 3300025291 Ga0209675_1009001 Ga0209675_10090013 375
94 3300025295 Ga0209564_1001454 Ga0209564_100145412 375
95 3300025297 Ga0209758_1001797 Ga0209758_100179710 375
96 3300025297 Ga0209758_1005397 Ga0209758_10053976 375
97 3300025299 Ga0209256_1003960 Ga0209256_10039605 375
98 3300028794 Ga0307515_10015479 Ga0307515_100154795 375
99 3300046460 Ga0495638_0000341 Ga0495638_0000341_38468_39733 375
100 3300046512 Ga0495610_0000616 Ga0495610_0000616_1954_3174 375
101 3300046660 Ga0495625_0000034 Ga0495625_0000034_64549_65772 375
102 3300046794 Ga0495589_0001954 Ga0495589_0001954_5252_6475 375
103 3300048918 Ga0496115_0012054 Ga0496115_0012054_13_1239 375
104 3300048920 Ga0496117_0024843 Ga0496117_0024843_314_1531 375
105 3300048921 Ga0496118_0011610 Ga0496118_0011610_2234_3451 375
106 3300048924 Ga0496121_0031775 Ga0496121_0031775_2151_3368 375
107 3300048925 Ga0496122_0007143 Ga0496122_0007143_7029_8246 375
108 3300048926 Ga0496123_0035851 Ga0496123_0035851_108_1325 375
109 3300053136 Ga0500559_0002115 Ga0500559_0002115_4237_5460 375
110 3300009093 Ga0105240_10008063 Ga0105240_1000806313 377
111 3300009098 Ga0105245_10000281 Ga0105245_1000028120 377
112 3300009148 Ga0105243_10000411 Ga0105243_1000041121 377
113 3300009176 Ga0105242_10000752 Ga0105242_1000075220 377
114 3300009545 Ga0105237_10000873 Ga0105237_1000087322 377
115 3300009551 Ga0105238_10290749 Ga0105238_102907492 377
116 3300009553 Ga0105249_10026176 Ga0105249_100261763 377
117 3300010375 Ga0105239_10039806 Ga0105239_100398062 377
118 3300011119 Ga0105246_10001218 Ga0105246_1000121810 377
119 3300013296 Ga0157374_10001017 Ga0157374_1000101717 377
120 3300013297 Ga0157378_10001127 Ga0157378_1000112717 377
121 3300013308 Ga0157375_10012062 Ga0157375_100120623 377
122 3300014745 Ga0157377_10004026 Ga0157377_100040264 377
123 3300014969 Ga0157376_10002783 Ga0157376_100027834 377
124 3300025304 Ga0209257_1002611 Ga0209257_10026116 377
125 3300025924 Ga0207694_10181861 Ga0207694_101818612 377
126 3300048910 Ga0496107_0000034 Ga0496107_0000034_30273_31502 377
127 3300048924 Ga0496121_0000607 Ga0496121_0000607_30717_31946 377
128 3300005614 Ga0068856_100065701 Ga0068856_1000657014 378
129 3300005616 Ga0068852_100001402 Ga0068852_1000014024 378
130 3300026078 Ga0207702_10043661 Ga0207702_100436613 378
131 3300026142 Ga0207698_10000590 Ga0207698_1000059014 378
132 3300037471 Ga0395905_0234081 Ga0395905_0234081_387_1655 378
133 3300047472 Ga0495686_0000199 Ga0495686_0000199_44253_45494 378
134 3300010375 Ga0105239_10210035 Ga0105239_102100352 379
135 3300013306 Ga0163162_10118914 Ga0163162_101189142 379
136 3300046616 Ga0495668_0016909 Ga0495668_0016909_98_1333 379
137 3300053156 Ga0500622_0063497 Ga0500622_0063497_233_1453 379
138 3300053161 Ga0500634_0067439 Ga0500634_0067439_408_1652 379
139 3300005347 Ga0070668_100041477 Ga0070668_1000414772 380
140 3300005844 Ga0068862_100026403 Ga0068862_1000264033 380
141 3300009177 Ga0105248_10029116 Ga0105248_100291162 380
142 3300025972 Ga0207668_10003623 Ga0207668_100036238 380
143 3300048920 Ga0496117_0024677 Ga0496117_0024677_3108_4346 380
144 3300048921 Ga0496118_0008350 Ga0496118_0008350_878_2116 380
145 3300048924 Ga0496121_0086952 Ga0496121_0086952_847_2085 380
146 3300048927 Ga0496124_0102584 Ga0496124_0102584_681_1919 380
147 3300048929 Ga0496126_0066864 Ga0496126_0066864_1645_2913 380
148 iso_pu_bacteria 2582581279 2585149654 380
149 iso_pu_bacteria 2585428106 2587915674 380
150 iso_pu_bacteria 2643221552 2643780033 380
151 iso_pu_bacteria 2643221640 2644223223 380
152 iso_pu_bacteria 2643221642 2644236507 380
153 iso_pu_bacteria 2857504554 2857505594 380
154 iso_pu_bacteria 2928531327 2928532296 380
155 iso_pu_bacteria 2841911363 2841911646 383
156 iso_pu_bacteria 2841917233 2841917397 383
157 3300002067 JGI24735J21928_10007889 JGI24735J21928_100078894 384
158 3300003214 JGI25165J46597_1000023 JGI25165J46597_1000023264 384
159 3300003781 Ga0055536_1002369 Ga0055536_10023696 384
160 3300003791 Ga0055530_10002819 Ga0055530_100028196 384
161 3300005339 Ga0070660_100008686 Ga0070660_1000086868 384
162 3300005614 Ga0068856_100050074 Ga0068856_1000500744 384
163 3300006186 Ga0075369_10003655 Ga0075369_100036552 384
164 3300009093 Ga0105240_10152363 Ga0105240_101523632 384
165 3300013104 Ga0157370_10000611 Ga0157370_1000061128 384
166 3300013105 Ga0157369_10034614 Ga0157369_100346144 384
167 3300025231 Ga0207427_101360 Ga0207427_1013604 384
168 3300025250 Ga0209026_1010216 Ga0209026_10102161 384
169 3300025254 Ga0209148_1004363 Ga0209148_10043634 384
170 3300025261 Ga0209233_1000003 Ga0209233_10000031101 384
171 3300025272 Ga0209455_1000467 Ga0209455_100046728 384
172 3300025292 Ga0209676_1001368 Ga0209676_100136811 384
173 3300025298 Ga0209050_1001189 Ga0209050_100118912 384
174 3300025303 Ga0209051_1010450 Ga0209051_10104503 384
175 3300025909 Ga0207705_10004105 Ga0207705_100041057 384
176 3300025913 Ga0207695_10097980 Ga0207695_100979802 384
177 3300025919 Ga0207657_10009479 Ga0207657_100094794 384
178 3300026078 Ga0207702_10161529 Ga0207702_101615292 384
179 3300037312 Ga0395899_0007362 Ga0395899_0007362_1297_2571 384
180 3300046457 Ga0495590_0003700 Ga0495590_0003700_3172_4407 384
181 3300046507 Ga0495606_0042280 Ga0495606_0042280_563_1813 384
182 3300046518 Ga0495631_0001585 Ga0495631_0001585_7334_8569 384
183 3300046530 Ga0495654_0030721 Ga0495654_0030721_1279_2514 384
184 3300046542 Ga0495597_0054005 Ga0495597_0054005_425_1675 384
185 3300046616 Ga0495668_0035688 Ga0495668_0035688_1397_2647 384
186 3300046660 Ga0495625_0046436 Ga0495625_0046436_254_1504 384
187 3300046692 Ga0495671_0023592 Ga0495671_0023592_95_1330 384
188 3300047472 Ga0495686_0002699 Ga0495686_0002699_11994_13229 384
189 3300048925 Ga0496122_0001683 Ga0496122_0001683_21167_22459 384
190 3300048926 Ga0496123_0006206 Ga0496123_0006206_4377_5669 384
191 3300048927 Ga0496124_0050800 Ga0496124_0050800_43_1335 384
192 3300050516 nmdc:mga0sz30_5987_c1 nmdc:mga0sz30_5987_c1_624_1874 384
193 3300053088 Ga0500644_0009203 Ga0500644_0009203_1174_2409 384
194 3300053108 Ga0500562_000719 Ga0500562_000719_6679_7914 384
195 3300053122 Ga0500608_000018 Ga0500608_000018_72476_73723 384
196 3300053136 Ga0500559_0002690 Ga0500559_0002690_2922_4172 384
197 3300053156 Ga0500622_0000949 Ga0500622_0000949_20182_21417 384
198 3300053156 Ga0500622_0004922 Ga0500622_0004922_4764_6014 384
199 iso_pu_bacteria 2643221733 2644729594 384
200 iso_pu_bacteria 2643221734 2644737972 384
201 iso_pu_bacteria 2818991467 2819720663 384
202 iso_pu_bacteria 2917699015 2917702750 384
203 3300009551 Ga0105238_10098985 Ga0105238_100989853 385
204 3300025909 Ga0207705_10000046 Ga0207705_10000046140 385
205 3300046460 Ga0495638_0000293 Ga0495638_0000293_58028_59284 385
206 3300046512 Ga0495610_0000179 Ga0495610_0000179_59121_60377 385
207 3300046660 Ga0495625_0005622 Ga0495625_0005622_9337_10593 385
208 3300053134 Ga0500658_0000955 Ga0500658_0000955_9176_10432 385
209 iso_pu_bacteria 2899845264 2899848028 385
210 iso_pu_bacteria 2926760298 2926763047 385
211 iso_pu_bacteria 2978969890 2978971522 385
212 iso_pu_bacteria 2984587000 2984588666 385
213 iso_pu_bacteria 650716007 650740337 385
214 3300003791 Ga0055530_10003296 Ga0055530_100032966 386
215 3300003794 Ga0055531_10007638 Ga0055531_100076384 386
216 3300005563 Ga0068855_100000207 Ga0068855_10000020735 386
217 3300025292 Ga0209676_1000272 Ga0209676_1000272105 386
218 3300025949 Ga0207667_10000024 Ga0207667_10000024188 386
219 3300046515 Ga0495620_0019881 Ga0495620_0019881_1058_2314 386
220 3300046530 Ga0495654_0000016 Ga0495654_0000016_81551_82807 386
221 3300048928 Ga0496125_0003599 Ga0496125_0003599_11963_13219 386
222 3300048929 Ga0496126_0004394 Ga0496126_0004394_13092_14348 386
223 3300053153 Ga0500616_0010126 Ga0500616_0010126_1625_2881 386
224 3300053153 Ga0500616_0032391 Ga0500616_0032391_324_1598 386
225 iso_pu_bacteria 2582581280 2585151061 386
226 iso_pu_bacteria 2582581293 2585196279 386
227 iso_pu_bacteria 2600255279 2601612072 386
228 iso_pu_bacteria 2600255308 2601749144 386
229 iso_pu_bacteria 2808606387 2808985152 386
230 iso_pu_bacteria 2933594066 2933596839 386
231 iso_pu_bacteria 2979089926 2979094459 386
232 iso_pu_bacteria 2979095461 2979098158 386
233 3300005347 Ga0070668_100000111 Ga0070668_1000001115 387
234 3300005355 Ga0070671_100000130 Ga0070671_10000013010 387
235 3300005548 Ga0070665_100207311 Ga0070665_1002073112 387
236 3300005841 Ga0068863_100000171 Ga0068863_10000017146 387
237 3300005843 Ga0068860_100024255 Ga0068860_1000242554 387
238 3300005844 Ga0068862_100040678 Ga0068862_1000406782 387
239 3300025931 Ga0207644_10001181 Ga0207644_100011813 387
240 3300025972 Ga0207668_10000136 Ga0207668_100001365 387
241 3300026088 Ga0207641_10000001 Ga0207641_10000001299 387
242 3300028379 Ga0268266_10166520 Ga0268266_101665202 387
243 3300028380 Ga0268265_10079463 Ga0268265_100794632 387
244 3300028381 Ga0268264_10006155 Ga0268264_100061553 387
245 3300046453 Ga0495627_000293 Ga0495627_000293_18976_20307 387
246 3300046471 Ga0495650_0000190 Ga0495650_0000190_41965_43314 387
247 3300046506 Ga0495583_0000003 Ga0495583_0000003_654414_655685 387
248 3300046660 Ga0495625_0023546 Ga0495625_0023546_469_1818 387
249 3300047320 Ga0495672_0000960 Ga0495672_0000960_9843_11105 387
250 3300047469 Ga0495673_0000053 Ga0495673_0000053_80827_82158 387
251 3300048920 Ga0496117_0033703 Ga0496117_0033703_47_1309 387
252 3300048921 Ga0496118_0023879 Ga0496118_0023879_2139_3401 387
253 3300053104 Ga0500556_0001272 Ga0500556_0001272_9304_10566 387
254 3300053730 Ga0500645_002159 Ga0500645_002159_3953_5215 387
255 iso_pu_bacteria 2643221545 2643750247 387
256 iso_pu_bacteria 2643221691 2644507136 387
257 3300003187 JGI25151J46595_10000072 JGI25151J46595_1000007251 388
258 3300003215 JGI25153J46596_10012526 JGI25153J46596_100125263 388
259 3300003771 Ga0055526_1000090 Ga0055526_100009024 388
260 3300003771 Ga0055526_1002908 Ga0055526_10029086 388
261 3300003775 Ga0055524_1000096 Ga0055524_100009617 388
262 3300013250 Ga0171462_1029 Ga0171462_102956 388
263 3300025291 Ga0209675_1001067 Ga0209675_10010677 388
264 3300025294 Ga0209025_1000187 Ga0209025_100018716 388
265 3300025295 Ga0209564_1000043 Ga0209564_1000043280 388
266 3300025295 Ga0209564_1000052 Ga0209564_1000052223 388
267 3300025299 Ga0209256_1000099 Ga0209256_100009972 388
268 3300025304 Ga0209257_1033013 Ga0209257_10330132 388
269 3300046460 Ga0495638_0010899 Ga0495638_0010899_123_1403 388
270 3300046506 Ga0495583_0000247 Ga0495583_0000247_67132_68412 388
271 3300046507 Ga0495606_0041589 Ga0495606_0041589_1405_2685 388
272 3300046665 Ga0495661_0129262 Ga0495661_0129262_70_1350 388
273 3300046691 Ga0495670_0092197 Ga0495670_0092197_137_1417 388
274 3300047472 Ga0495686_0000876 Ga0495686_0000876_2065_3342 388
275 3300048920 Ga0496117_0033438 Ga0496117_0033438_2256_3494 388
276 3300048920 Ga0496117_0102017 Ga0496117_0102017_484_1764 388
277 3300048925 Ga0496122_0025189 Ga0496122_0025189_2179_3417 388
278 3300048925 Ga0496122_0076077 Ga0496122_0076077_340_1638 388
279 3300048926 Ga0496123_0048488 Ga0496123_0048488_1002_2300 388
280 3300048927 Ga0496124_0087715 Ga0496124_0087715_654_1892 388
281 3300048927 Ga0496124_0168738 Ga0496124_0168738_136_1374 388
282 3300048929 Ga0496126_0240200 Ga0496126_0240200_133_1371 388
283 3300049573 Ga0501037_0003530 Ga0501037_0003530_1761_3080 388
284 3300049822 Ga0501035_0255497 Ga0501035_0255497_157_1416 388
285 3300053103 Ga0500555_000542 Ga0500555_000542_13704_14984 388
286 3300053125 Ga0500618_013365 Ga0500618_013365_18_1298 388
287 3300003775 Ga0055524_1007001 Ga0055524_10070012 389
288 3300005355 Ga0070671_100061501 Ga0070671_1000615012 389
289 3300005617 Ga0068859_100058130 Ga0068859_1000581304 389
290 3300006931 Ga0097620_100058130 Ga0097620_1000581302 389
291 3300025299 Ga0209256_1002546 Ga0209256_100254613 389
292 3300046660 Ga0495625_0005077 Ga0495625_0005077_926_2191 389
293 iso_pu_bacteria 2842775625 2842778432 389
294 iso_pu_bacteria 2919450847 2919451779 389
295 3300005937 Ga0081455_10105352 Ga0081455_101053521 390
296 3300033180 Ga0307510_10182413 Ga0307510_101824131 390
297 3300001990 JGI24737J22298_10003311 JGI24737J22298_100033113 391
298 3300002067 JGI24735J21928_10006581 JGI24735J21928_100065813 391
299 3300002075 JGI24738J21930_10002127 JGI24738J21930_100021275 391
300 3300003762 Ga0055542_1002363 Ga0055542_10023633 391
301 3300005328 Ga0070676_10052452 Ga0070676_100524522 391
302 3300005354 Ga0070675_100002808 Ga0070675_1000028084 391
303 3300005455 Ga0070663_100001168 Ga0070663_1000011687 391
304 3300005539 Ga0068853_100036574 Ga0068853_1000365742 391
305 3300005539 Ga0068853_100068567 Ga0068853_1000685672 391
306 3300005543 Ga0070672_100019253 Ga0070672_1000192532 391
307 3300005578 Ga0068854_100000150 Ga0068854_1000001504 391
308 3300010375 Ga0105239_10044756 Ga0105239_100447564 391
309 3300013307 Ga0157372_10367006 Ga0157372_103670062 391
310 3300025254 Ga0209148_1000208 Ga0209148_10002086 391
311 3300025901 Ga0207688_10021428 Ga0207688_100214283 391
312 3300025907 Ga0207645_10082813 Ga0207645_100828131 391
313 3300025913 Ga0207695_10012729 Ga0207695_100127298 391
314 3300025914 Ga0207671_10006357 Ga0207671_100063576 391
315 3300025919 Ga0207657_10177483 Ga0207657_101774832 391
316 3300025926 Ga0207659_10006856 Ga0207659_100068567 391
317 3300025932 Ga0207690_10010446 Ga0207690_100104462 391
318 3300025940 Ga0207691_10008322 Ga0207691_100083224 391
319 3300025981 Ga0207640_10001061 Ga0207640_100010614 391
320 3300026041 Ga0207639_10004624 Ga0207639_100046244 391
321 3300026041 Ga0207639_10028805 Ga0207639_100288052 391
322 3300026041 Ga0207639_10091973 Ga0207639_100919732 391
323 3300026067 Ga0207678_10002489 Ga0207678_100024894 391
324 3300026121 Ga0207683_10011268 Ga0207683_100112685 391
325 3300001904 JGI24736J21556_1004012 JGI24736J21556_10040122 392
326 3300001989 JGI24739J22299_10000621 JGI24739J22299_100006219 392
327 3300001990 JGI24737J22298_10002321 JGI24737J22298_100023212 392
328 3300002067 JGI24735J21928_10002025 JGI24735J21928_100020252 392
329 3300002075 JGI24738J21930_10000144 JGI24738J21930_100001448 392
330 3300005327 Ga0070658_10000143 Ga0070658_1000014329 392
331 3300005339 Ga0070660_100001899 Ga0070660_1000018998 392
332 3300005457 Ga0070662_100002155 Ga0070662_1000021554 392
333 3300013307 Ga0157372_10089241 Ga0157372_100892412 392
334 3300013307 Ga0157372_10115946 Ga0157372_101159462 392
335 3300025904 Ga0207647_10001549 Ga0207647_100015499 392
336 3300025909 Ga0207705_10000299 Ga0207705_1000029929 392
337 3300025919 Ga0207657_10002404 Ga0207657_100024047 392
338 3300025933 Ga0207706_10005434 Ga0207706_100054348 392
339 3300026041 Ga0207639_10038530 Ga0207639_100385303 392
340 3300031548 Ga0307408_100008992 Ga0307408_1000089922 392
341 3300031731 Ga0307405_10033833 Ga0307405_100338333 392
342 3300031911 Ga0307412_10005784 Ga0307412_100057843 392
343 3300032002 Ga0307416_100019305 Ga0307416_1000193052 392
344 3300038443 Ga0395901_0342900 Ga0395901_0342900_234_1505 392
345 3300044693 Ga0466961_0002863 Ga0466961_0002863_8261_9532 392
346 3300045049 Ga0466959_0115792 Ga0466959_0115792_440_1711 392
347 3300049523 Ga0501300_004042 Ga0501300_004042_727_1980 392
348 3300053116 Ga0500592_002076 Ga0500592_002076_1908_3158 392
349 3300053158 Ga0500627_0000095 Ga0500627_0000095_24678_25928 392
350 iso_pu_bacteria 8001845381 8001850127 392
351 3300005339 Ga0070660_100002166 Ga0070660_1000021664 393
352 3300005563 Ga0068855_100216471 Ga0068855_1002164712 393
353 3300025919 Ga0207657_10004579 Ga0207657_1000457910 393
354 3300025949 Ga0207667_10055490 Ga0207667_100554904 393
355 3300053087 Ga0500643_000366 Ga0500643_000366_13161_14414 393
356 2162886006 SwRhRL3b_contig_2096357 SwRhRL3b_0661.00000080 394
357 3300005295 Ga0065707_10000499 Ga0065707_1000049910 394
358 3300014326 Ga0157380_10013683 Ga0157380_100136832 394

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

65

410

0.86

PF00083

Sugar_tr

Sugar (and other) transporter

85

242

0.84

PF06609

TRI12

Fungal trichothecene efflux pump (TRI12)

51

279

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
6gv1-assembly1.cif.gz_A crystal structure of e.coli multidrug/h+ antiporter mdfa in outward open conformation with bound fab fragment 0.8098 20 376
8hnc-assembly1.cif.gz_A cryo-em structure of human oatp1b1 in complex with bilirubin 0.7912 15 311
8hnb-assembly1.cif.gz_A cryo-em structure of human oatp1b1 in apo state 0.7892 15 309
8hnh-assembly1.cif.gz_A cryo-em structure of human oatp1b1 in complex with simeprevir 0.7848 15 309
6gv1-assembly1.cif.gz_A crystal structure of e.coli multidrug/h+ antiporter mdfa in outward open conformation with bound fab fragment 0.751 20 376
ID Description Score Start End Superfamily
af_Q59XM0_143_338_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9584 21 200 1.20.1250.20
af_Q86M88_601_814_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9379 20 193 1.20.1250.20
af_Q03263_69_259_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9364 20 196 1.20.1250.20
af_O69695_42_237_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9261 21 205 1.20.1250.20
af_P54219_107_289_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.92 55 192 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A1Q8JFS1-F1-model_v4 Putative transmembrane efflux protein 0.9223 18 185 GO:0016020
GO:0022857
AF-M2Y0D7-F1-model_v4 MFS transporter, SP family, sugar:H+ symporter 0.9146 18 198 GO:0016020
GO:0022857
AF-A0A767S6G8-F1-model_v4 Myo-inositol import MFS transporter IolT2 0.9067 18 198 GO:0005351
GO:0005886
AF-A0A091SSB4-F1-model_v4 Putative transporter SVOPL 0.905 18 198 GO:0016020
GO:0022857
AF-A0A7J9B999-F1-model_v4 Major facilitator superfamily (MFS) profile domain-containing protein 0.8999 21 198 GO:0015149
GO:0016020

Feature Viewer

pLDDT pTM Quality
78.86 0.7 High
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Predicted Structure (AlphaFold2)

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