F419526

General Info

Members Datasets Scaffolds Average Seq Length
353 178 706 237

Family's Representative Sequence

Representative Sequence 3300048925|Ga0496122_0000372|Ga0496122_0000372_27805_28680
Length 291
Sequence MSKNPMESVIRAEGLGKTYAEGKMHTPVFDGLDLDVKPGETVAIVGASGAGKSTLLHLLGGLDVPTAGEVYVAGHRMSALSDTERGRLRNRSLGFVYQFHHLLPEFTALENVMMPVMLDEKSPVPGRRWVATSIATVCFATLASVRTGHWIFLWLALGLWLAGLFGVGVISYWSGRKKVVAARQRATEILEAVGLGHRVHHKPGELSGGERQRAAVARALVNNPACILGDEPTGNLDDKTAGTVFELMLALNRRYQTSLVLVTHDRSLARKLDRVLELREGRLHQLERSEV

Samples

Sample ID Description Type Environment
1 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
2 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
3 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
4 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
5 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
6 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
7 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
8 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
9 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
10 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
11 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
12 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
13 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
14 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
15 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
16 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
17 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
18 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
19 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
20 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
21 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
22 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
23 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
24 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
29 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
30 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
31 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
34 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
35 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
36 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
37 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
38 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
41 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
42 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
43 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
44 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
49 3300009993 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_106 metaG Metagenome Rhizosphere
50 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
51 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
52 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
53 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
54 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
55 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
56 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
57 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
58 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
59 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
60 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
61 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
62 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
63 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
94 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
96 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
97 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
98 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
99 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
100 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
101 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
102 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
103 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
104 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
105 3300033529 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
106 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
107 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
108 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
109 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
110 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
111 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
112 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
113 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
114 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
115 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
116 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
117 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
118 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
119 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
120 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
121 3300042142 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913L_E14_072516_1610 Metagenome Rhizosphere
122 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
123 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
124 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
125 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
126 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
127 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
128 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
129 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
130 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
131 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
132 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
133 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
134 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
147 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
148 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
149 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
150 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
151 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
152 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
153 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
154 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
155 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
156 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
157 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
158 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
159 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
162 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
163 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
164 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
165 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
166 2526164512 Azovibrio restrictus DSM 23866 Isolate Unclassified
167 2643221559 Lysobacter sp. Root559 Isolate Unclassified
168 2643221586 Lysobacter sp. Root667 Isolate Unclassified
169 2643221612 Lysobacter sp. Root76 Isolate Unclassified
170 2643221727 Lysobacter sp. Root96 Isolate Unclassified
171 2738541276 Cellvibrio sp. YR554 Isolate Unclassified
172 2747842501 Xanthomonas sp. WCS2014-23 Isolate Unclassified
173 2895498888 Pseudoxanthomonas sp. SGD-10 Isolate Rhizosphere
174 2895511927 Pseudoxanthomonas sp. SGD-5-1 Isolate Rhizosphere
175 2895522137 Pseudoxanthomonas sp. SGNA-20 Isolate Rhizosphere
176 2895525241 Pseudoxanthomonas sp. SGT-18 Isolate Rhizosphere
177 2987605356 Stenotrophomonas sp. ATCM1_4 Isolate Unclassified
178 8001522603 Methylomicrobium sp. RS1 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 94.62
Metatranscriptomes 1.7
Isolates 3.68

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.12
Nodule 0
Rhizoplane 0.57
Rhizosphere 91.22
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496122_0000372 3300048925 Bacteria 96314
2 JGI24741J21665_1000903 3300001915 Bacteria 8943
3 JGI24741J21665_1001852 3300001915 Bacteria 5768
4 JGI24741J21665_1007523 3300001915 Bacteria 2111
5 JGI24741J21665_1010716 3300001915 Bacteria 1628
6 JGI24740J21852_10000088 3300001979 Bacteria 31765
7 JGI24740J21852_10001703 3300001979 Bacteria 10094
8 JGI25152J39213_1000035 3300002773 Bacteria 93806
9 JGI25150J39212_1000236 3300002774 Bacteria 30024
10 JGI25151J46595_10000057 3300003187 Bacteria 151052
11 JGI25153J46596_10000041 3300003215 Bacteria 162103
12 rootH1_10028139 3300003323 Bacteria 25168
13 rootH1_10067827 3300003323 Bacteria 16910
14 Ga0058692_1000002 3300003856 Bacteria 508401
15 Ga0070658_10084394 3300005327 Bacteria 2611
16 Ga0070658_10412086 3300005327 Bacteria 1161
17 Ga0070683_100088814 3300005329 Bacteria 2900
18 Ga0070683_100354327 3300005329 Bacteria 1397
19 Ga0068869_100198474 3300005334 Bacteria 1581
20 Ga0070680_100000138 3300005336 Bacteria 44481
21 Ga0070680_100004807 3300005336 Bacteria 10169
22 Ga0070680_100008622 3300005336 Bacteria 7815
23 Ga0070680_100091690 3300005336 Bacteria 2515
24 Ga0070680_100177203 3300005336 Bacteria 1795
25 Ga0070680_100213675 3300005336 Bacteria 1627
26 Ga0070680_100243103 3300005336 Bacteria 1521
27 Ga0070680_100285829 3300005336 Bacteria 1398
28 Ga0070682_100001670 3300005337 Bacteria 12348
29 Ga0070682_100009298 3300005337 Bacteria 5563
30 Ga0070682_100120481 3300005337 Bacteria 1761
31 Ga0070660_100008801 3300005339 Bacteria 7072
32 Ga0070660_100446624 3300005339 Bacteria 1072
33 Ga0070660_100711004 3300005339 Bacteria 843
34 Ga0070689_100052463 3300005340 Bacteria 3154
35 Ga0070691_10003502 3300005341 Bacteria 7076
36 Ga0070691_10004590 3300005341 Bacteria 6275
37 Ga0070691_10013088 3300005341 Bacteria 3799
38 Ga0070661_100011681 3300005344 Bacteria 6123
39 Ga0070661_100015272 3300005344 Bacteria 5419
40 Ga0070661_100021905 3300005344 Bacteria 4571
41 Ga0070661_100091798 3300005344 Bacteria 2249
42 Ga0070692_10000052 3300005345 Bacteria 22247
43 Ga0070692_10009339 3300005345 Bacteria 4420
44 Ga0070692_10090415 3300005345 Bacteria 1663
45 Ga0070692_10101979 3300005345 Bacteria 1575
46 Ga0070675_100017909 3300005354 Bacteria 5635
47 Ga0070675_100806807 3300005354 Bacteria 858
48 Ga0070671_100138420 3300005355 Bacteria 2053
49 Ga0070674_100057084 3300005356 Bacteria 2709
50 Ga0070659_100027228 3300005366 Bacteria 4402
51 Ga0070659_100280375 3300005366 Bacteria 1386
52 Ga0070663_100002503 3300005455 Bacteria 10363
53 Ga0070663_100021325 3300005455 Bacteria 4308
54 Ga0070663_100036104 3300005455 Bacteria 3433
55 Ga0070662_100060469 3300005457 Bacteria 2763
56 Ga0070681_10000076 3300005458 Bacteria 73378
57 Ga0070681_10000659 3300005458 Bacteria 28494
58 Ga0070681_10002191 3300005458 Bacteria 17787
59 Ga0070681_10007385 3300005458 Bacteria 10742
60 Ga0070681_10123618 3300005458 Bacteria 2520
61 Ga0070679_100000504 3300005530 Bacteria 33271
62 Ga0070679_100002148 3300005530 Bacteria 17775
63 Ga0070679_100002491 3300005530 Bacteria 16690
64 Ga0070679_100142729 3300005530 Bacteria 2373
65 Ga0070684_100111052 3300005535 Bacteria 2458
66 Ga0070684_100257326 3300005535 Bacteria 1596
67 Ga0068853_100031776 3300005539 Bacteria 4467
68 Ga0068853_100122805 3300005539 Bacteria 2318
69 Ga0068853_100202575 3300005539 Bacteria 1806
70 Ga0070696_100009116 3300005546 Bacteria 6646
71 Ga0070696_100102720 3300005546 Bacteria 2050
72 Ga0070693_100013696 3300005547 Bacteria 4138
73 Ga0070665_100306978 3300005548 Bacteria 1590
74 Ga0068855_100026753 3300005563 Bacteria 6902
75 Ga0068855_100180750 3300005563 Bacteria 2385
76 Ga0068855_100478677 3300005563 Bacteria 1355
77 Ga0068855_100623078 3300005563 Bacteria 1161
78 Ga0070664_100067120 3300005564 Bacteria 3065
79 Ga0068854_100004867 3300005578 Bacteria 8472
80 Ga0068854_100008112 3300005578 Bacteria 6737
81 Ga0068854_100224945 3300005578 Bacteria 1486
82 Ga0068854_100257724 3300005578 Bacteria 1395
83 Ga0068856_100466478 3300005614 Bacteria 1283
84 Ga0068852_100137718 3300005616 Bacteria 2255
85 Ga0068851_10007874 3300005834 Bacteria 4905
86 Ga0068860_100889926 3300005843 Bacteria 906
87 Ga0068862_100037735 3300005844 Bacteria 4096
88 Ga0075364_10000141 3300006051 Bacteria 31242
89 Ga0075364_10026229 3300006051 Bacteria 3715
90 Ga0075428_100000614 3300006844 Bacteria 36424
91 Ga0075428_100595551 3300006844 Bacteria 1181
92 Ga0075429_100035993 3300006880 Bacteria 4306
93 Ga0075435_100363984 3300007076 Bacteria 1241
94 Ga0105240_10121522 3300009093 Bacteria 3144
95 Ga0105240_10169886 3300009093 Bacteria 2584
96 Ga0111539_10148114 3300009094 Bacteria 2748
97 Ga0111539_10162629 3300009094 Bacteria 2610
98 Ga0111539_11131895 3300009094 Bacteria 909
99 Ga0105245_10072828 3300009098 Bacteria 3122
100 Ga0105238_10500174 3300009551 Bacteria 1216
101 Ga0105028_111436 3300009993 Bacteria 935
102 Ga0157373_10010745 3300013100 Bacteria 6736
103 Ga0157373_10018339 3300013100 Bacteria 5097
104 Ga0157373_10214214 3300013100 Bacteria 1358
105 Ga0157373_10509465 3300013100 Bacteria 870
106 Ga0157373_10693677 3300013100 Bacteria 746
107 Ga0157371_10043167 3300013102 Bacteria 3213
108 Ga0157371_10117878 3300013102 Bacteria 1887
109 Ga0157370_10004947 3300013104 Bacteria 15084
110 Ga0157370_10005521 3300013104 Bacteria 14178
111 Ga0157370_10037989 3300013104 Bacteria 4660
112 Ga0157370_10118609 3300013104 Bacteria 2471
113 Ga0157370_10260201 3300013104 Bacteria 1604
114 Ga0157369_10012834 3300013105 Bacteria 9500
115 Ga0157369_10380733 3300013105 Bacteria 1464
116 Ga0157372_10113677 3300013307 Bacteria 3103
117 Ga0182006_1058203 3300015261 Bacteria 1466
118 Ga0206356_11531219 3300020070 Bacteria 1081
119 Ga0206354_10606333 3300020081 Bacteria 12250
120 Ga0206353_10256666 3300020082 Bacteria 2610
121 Ga0206353_10358202 3300020082 Bacteria 14438
122 Ga0206353_10409696 3300020082 Bacteria 1742
123 Ga0207425_1000044 3300025245 Bacteria 195202
124 Ga0209129_1000044 3300025258 Bacteria 298971
125 Ga0209025_1000012 3300025294 Bacteria 924362
126 Ga0209758_1000018 3300025297 Bacteria 753320
127 Ga0207656_10026412 3300025321 Bacteria 2367
128 Ga0207647_10002058 3300025904 Bacteria 15371
129 Ga0207647_10009668 3300025904 Bacteria 6845
130 Ga0207705_10000146 3300025909 Bacteria 75353
131 Ga0207705_10000373 3300025909 Bacteria 40446
132 Ga0207705_10000788 3300025909 Bacteria 26019
133 Ga0207705_10004997 3300025909 Bacteria 9952
134 Ga0207705_10012657 3300025909 Bacteria 6088
135 Ga0207707_10000018 3300025912 Bacteria 215518
136 Ga0207707_10000036 3300025912 Bacteria 146159
137 Ga0207707_10000333 3300025912 Bacteria 49777
138 Ga0207707_10000725 3300025912 Bacteria 32573
139 Ga0207707_10000844 3300025912 Bacteria 30022
140 Ga0207707_10001158 3300025912 Bacteria 25008
141 Ga0207707_10002702 3300025912 Bacteria 15852
142 Ga0207707_10024357 3300025912 Bacteria 5297
143 Ga0207707_10079205 3300025912 Bacteria 2869
144 Ga0207695_10002127 3300025913 Bacteria 30005
145 Ga0207695_10002823 3300025913 Bacteria 25242
146 Ga0207695_10006716 3300025913 Bacteria 14851
147 Ga0207695_10045916 3300025913 Bacteria 4633
148 Ga0207695_10112034 3300025913 Bacteria 2707
149 Ga0207671_10069608 3300025914 Bacteria 2622
150 Ga0207660_10001193 3300025917 Bacteria 17439
151 Ga0207660_10002549 3300025917 Bacteria 11973
152 Ga0207660_10003487 3300025917 Bacteria 10260
153 Ga0207660_10004764 3300025917 Bacteria 8836
154 Ga0207660_10009318 3300025917 Bacteria 6356
155 Ga0207660_10011789 3300025917 Bacteria 5698
156 Ga0207660_10054932 3300025917 Bacteria 2844
157 Ga0207660_10057847 3300025917 Bacteria 2778
158 Ga0207657_10010671 3300025919 Bacteria 9148
159 Ga0207657_10020911 3300025919 Bacteria 6175
160 Ga0207657_10034979 3300025919 Bacteria 4509
161 Ga0207657_10035284 3300025919 Bacteria 4486
162 Ga0207649_10002055 3300025920 Bacteria 11443
163 Ga0207649_10014217 3300025920 Bacteria 4453
164 Ga0207652_10000409 3300025921 Bacteria 44486
165 Ga0207652_10000492 3300025921 Bacteria 40163
166 Ga0207652_10001049 3300025921 Bacteria 25253
167 Ga0207652_10001843 3300025921 Bacteria 18382
168 Ga0207652_10010990 3300025921 Bacteria 7299
169 Ga0207652_10090391 3300025921 Bacteria 2690
170 Ga0207652_10090800 3300025921 Bacteria 2685
171 Ga0207694_10006155 3300025924 Bacteria 9170
172 Ga0207659_10656917 3300025926 Bacteria 896
173 Ga0207687_10435231 3300025927 Bacteria 1085
174 Ga0207690_10004199 3300025932 Bacteria 8515
175 Ga0207690_10018814 3300025932 Bacteria 4241
176 Ga0207690_10062683 3300025932 Bacteria 2532
177 Ga0207706_10006462 3300025933 Bacteria 10884
178 Ga0207706_10480364 3300025933 Bacteria 1074
179 Ga0207670_10070899 3300025936 Bacteria 2408
180 Ga0207691_10156529 3300025940 Bacteria 2001
181 Ga0207689_10181711 3300025942 Bacteria 1734
182 Ga0207661_10012843 3300025944 Bacteria 6103
183 Ga0207661_10529228 3300025944 Bacteria 1078
184 Ga0207679_10089245 3300025945 Bacteria 2379
185 Ga0207667_10000493 3300025949 Bacteria 52083
186 Ga0207667_10000947 3300025949 Bacteria 37022
187 Ga0207667_10013506 3300025949 Bacteria 9337
188 Ga0207667_10015946 3300025949 Bacteria 8510
189 Ga0207667_10220237 3300025949 Bacteria 1944
190 Ga0207640_10001251 3300025981 Bacteria 13848
191 Ga0207640_10002435 3300025981 Bacteria 9952
192 Ga0207640_10003568 3300025981 Bacteria 8389
193 Ga0207640_10010905 3300025981 Bacteria 5127
194 Ga0207640_10078168 3300025981 Bacteria 2251
195 Ga0207639_10001482 3300026041 Bacteria 15784
196 Ga0207639_10439741 3300026041 Bacteria 1182
197 Ga0207678_10006217 3300026067 Bacteria 10611
198 Ga0207678_10006373 3300026067 Bacteria 10476
199 Ga0207678_10048218 3300026067 Bacteria 3682
200 Ga0207678_10264062 3300026067 Bacteria 1476
201 Ga0207708_10183152 3300026075 Bacteria 1663
202 Ga0207702_10005859 3300026078 Bacteria 10689
203 Ga0207702_10090465 3300026078 Bacteria 2678
204 Ga0207702_10103074 3300026078 Bacteria 2523
205 Ga0207674_10008704 3300026116 Bacteria 11683
206 Ga0207674_10010526 3300026116 Bacteria 10470
207 Ga0207698_10000617 3300026142 Bacteria 20707
208 Ga0207698_10000910 3300026142 Bacteria 17198
209 Ga0209371_1000004 3300027312 Bacteria 1098197
210 Ga0209974_10006856 3300027876 Bacteria 3952
211 Ga0207428_10005761 3300027907 Bacteria 11500
212 Ga0268265_10103837 3300028380 Bacteria 2302
213 Ga0268256_1000005 3300030500 Bacteria 1082342
214 Ga0307408_100002164 3300031548 Bacteria 14056
215 Ga0307408_100030606 3300031548 Bacteria 3739
216 Ga0316575_10049366 3300031665 Bacteria 1674
217 Ga0316577_10024881 3300031733 Bacteria 3330
218 Ga0307410_10167193 3300031852 Bacteria 1654
219 Ga0307407_10125328 3300031903 Bacteria 1635
220 Ga0307416_100093427 3300032002 Bacteria 2591
221 Ga0307414_10348762 3300032004 Bacteria 1270
222 Ga0307414_10477796 3300032004 Bacteria 1098
223 Ga0307411_10501485 3300032005 Bacteria 1026
224 Ga0316583_10005790 3300032133 Bacteria 4443
225 Ga0316587_1003774 3300033529 Bacteria 2149
226 Ga0373952_0000972 3300035092 Bacteria 5215
227 Ga0373960_0033530 3300035121 Bacteria 1448
228 Ga0316574_0158154 3300035398 Bacteria 1460
229 Ga0316582_0051664 3300036647 Bacteria 2609
230 Ga0316584_0042271 3300036712 Bacteria 3399
231 Ga0395899_0021178 3300037312 Bacteria 4932
232 Ga0395899_0031346 3300037312 Bacteria 3995
233 Ga0395899_0223274 3300037312 Bacteria 1304
234 Ga0395900_0000033 3300037418 Bacteria 260271
235 Ga0395900_0001828 3300037418 Bacteria 24288
236 Ga0395900_0034366 3300037418 Bacteria 5220
237 Ga0395900_0037620 3300037418 Bacteria 4988
238 Ga0395900_0093539 3300037418 Bacteria 3088
239 Ga0395900_0485603 3300037418 Bacteria 1187
240 Ga0395898_0063131 3300037466 Bacteria 3595
241 Ga0395898_0267895 3300037466 Bacteria 1629
242 Ga0395898_0299013 3300037466 Bacteria 1535
243 Ga0395905_0002534 3300037471 Bacteria 20158
244 Ga0395905_0027770 3300037471 Bacteria 5336
245 Ga0395905_0051239 3300037471 Bacteria 3866
246 Ga0395905_0225020 3300037471 Bacteria 1755
247 Ga0395901_0019774 3300038443 Bacteria 6886
248 Ga0395901_0388421 3300038443 Bacteria 1435
249 Ga0237819_00943 3300038705 Bacteria 8882
250 Ga0400490_19582 3300038726 Bacteria 22173
251 Ga0400488_63605 3300038741 Bacteria 1350
252 Ga0400483_102854 3300039062 Bacteria 3517
253 Ga0400489_09548 3300039093 Bacteria 1628
254 Ga0450905_016417 3300042142 Bacteria 1068
255 Ga0453683_0138540 3300044673 Bacteria 1535
256 Ga0451576_0008876 3300045051 Bacteria 11739
257 Ga0451576_0031848 3300045051 Bacteria 5620
258 Ga0495648_0001042 3300046524 Bacteria 28141
259 Ga0495672_0000396 3300047320 Bacteria 53092
260 Ga0495683_0000827 3300047323 Bacteria 22065
261 Ga0495683_0074455 3300047323 Bacteria 1664
262 Ga0495673_0000002 3300047469 Bacteria 1499170
263 Ga0495681_0057856 3300047470 Bacteria 1799
264 Ga0495686_0005748 3300047472 Bacteria 9694
265 Ga0496100_0147248 3300048903 Bacteria 1676
266 Ga0496113_0027766 3300048916 Bacteria 4062
267 Ga0496123_0003662 3300048926 Bacteria 16955
268 Ga0495682_0011887 3300049460 Bacteria 3346
269 Ga0495682_0012537 3300049460 Bacteria 3247
270 Ga0501032_0406445 3300049569 Bacteria 874
271 Ga0501033_0128975 3300049570 Bacteria 1833
272 Ga0501036_0393017 3300049572 Bacteria 1157
273 Ga0501036_0412434 3300049572 Bacteria 1126
274 Ga0501037_0072888 3300049573 Bacteria 2497
275 Ga0501037_0098235 3300049573 Bacteria 2115
276 Ga0501038_0073194 3300049574 Bacteria 2902
277 Ga0501039_0018139 3300049575 Bacteria 5401
278 Ga0501039_0061232 3300049575 Bacteria 2915
279 Ga0501041_0010443 3300049577 Bacteria 5471
280 Ga0501042_0157514 3300049578 Bacteria 1638
281 Ga0501043_0017272 3300049579 Bacteria 5660
282 Ga0501043_0375128 3300049579 Bacteria 1078
283 Ga0501046_0022428 3300049580 Bacteria 5202
284 Ga0501046_0061726 3300049580 Bacteria 2929
285 Ga0501047_0023500 3300049581 Bacteria 5916
286 Ga0501048_0167386 3300049582 Bacteria 1556
287 Ga0501069_0003711 3300049585 Bacteria 7849
288 Ga0501069_0009668 3300049585 Bacteria 5095
289 Ga0501069_0013405 3300049585 Bacteria 4371
290 Ga0501069_0040567 3300049585 Bacteria 2573
291 Ga0501069_0106887 3300049585 Bacteria 1591
292 Ga0501069_0161249 3300049585 Bacteria 1291
293 Ga0501070_0000553 3300049586 Bacteria 34119
294 Ga0501070_0002909 3300049586 Bacteria 14911
295 Ga0501070_0009236 3300049586 Bacteria 8337
296 Ga0501070_0009845 3300049586 Bacteria 8083
297 Ga0501070_0013614 3300049586 Bacteria 6855
298 Ga0501070_0026957 3300049586 Bacteria 4819
299 Ga0501070_0075993 3300049586 Bacteria 2780
300 Ga0501070_0083616 3300049586 Bacteria 2642
301 Ga0501070_0188476 3300049586 Bacteria 1696
302 Ga0501070_0202370 3300049586 Bacteria 1630
303 Ga0501070_0333222 3300049586 Bacteria 1233
304 Ga0501070_0714917 3300049586 Bacteria 791
305 Ga0501071_0010172 3300049587 Bacteria 6294
306 Ga0501071_0016174 3300049587 Bacteria 5128
307 Ga0501072_0143912 3300049588 Bacteria 1901
308 Ga0501073_0000408 3300049589 Bacteria 29377
309 Ga0501073_0027494 3300049589 Bacteria 4067
310 Ga0501074_0001149 3300049590 Bacteria 17309
311 Ga0501074_0002304 3300049590 Bacteria 13293
312 Ga0501074_0003215 3300049590 Bacteria 11533
313 Ga0501075_0018254 3300049591 Bacteria 5074
314 Ga0501075_0058557 3300049591 Bacteria 2902
315 Ga0501076_0001354 3300049592 Bacteria 16395
316 Ga0501077_0002638 3300049593 Bacteria 10737
317 Ga0501198_015396 3300049649 Bacteria 1173
318 Ga0501079_0001927 3300049741 Bacteria 14865
319 Ga0501079_0160185 3300049741 Bacteria 1755
320 Ga0501079_0357398 3300049741 Bacteria 1145
321 Ga0501080_0008660 3300049742 Bacteria 9237
322 Ga0501080_0011008 3300049742 Bacteria 8281
323 Ga0501080_0016247 3300049742 Bacteria 6873
324 Ga0501080_0103264 3300049742 Bacteria 2643
325 Ga0501080_0147133 3300049742 Bacteria 2178
326 Ga0501081_0002347 3300049743 Bacteria 11916
327 Ga0501035_0003972 3300049822 Bacteria 14094
328 Ga0501035_0017239 3300049822 Bacteria 6658
329 Ga0501035_0041426 3300049822 Bacteria 4158
330 Ga0501035_0134055 3300049822 Bacteria 2157
331 Ga0501044_0011190 3300049823 Bacteria 9730
332 Ga0501044_0021092 3300049823 Bacteria 6956
333 Ga0501044_0046766 3300049823 Bacteria 4479
334 Ga0501044_0092364 3300049823 Bacteria 3052
335 Ga0501045_0373189 3300049824 Bacteria 1062
336 nmdc:mga00v17_88_c1 3300050491 Bacteria 56091
337 nmdc:mga09592_9001_c1 3300050508 Bacteria 8116
338 nmdc:mga08y16_242717_c1 3300050511 Bacteria 1862
339 nmdc:mga08y16_5452_c1 3300050511 Bacteria 13299
340 Ga0501082_0016920 3300060353 Bacteria 6279
341 2526210716 2526164512 Bacteria 4025691
342 2643817570 2643221559 Bacteria 4424915
343 2643940224 2643221586 Bacteria 4446529
344 2644079352 2643221612 Bacteria 4361984
345 2644694796 2643221727 Bacteria 4415595
346 2738714994 2738541276 Bacteria 4690596
347 2748016163 2747842501 Bacteria 5293829
348 2895504014 2895498888 Bacteria 5283788
349 2895515362 2895511927 Bacteria 6802080
350 2895523487 2895522137 Bacteria 3284416
351 2895527858 2895525241 Bacteria 3388457
352 2987606290 2987605356 Bacteria 4187822
353 8001524684 8001522603 Bacteria 4726425
354 Ga0496122_0000372
355 JGI24741J21665_1000903
356 JGI24741J21665_1001852
357 JGI24741J21665_1007523
358 JGI24741J21665_1010716
359 JGI24740J21852_10000088
360 JGI24740J21852_10001703
361 JGI25152J39213_1000035
362 JGI25150J39212_1000236
363 JGI25151J46595_10000057
364 JGI25153J46596_10000041
365 rootH1_10028139
366 rootH1_10067827
367 Ga0058692_1000002
368 Ga0070658_10084394
369 Ga0070658_10412086
370 Ga0070683_100088814
371 Ga0070683_100354327
372 Ga0068869_100198474
373 Ga0070680_100000138
374 Ga0070680_100004807
375 Ga0070680_100008622
376 Ga0070680_100091690
377 Ga0070680_100177203
378 Ga0070680_100213675
379 Ga0070680_100243103
380 Ga0070680_100285829
381 Ga0070682_100001670
382 Ga0070682_100009298
383 Ga0070682_100120481
384 Ga0070660_100008801
385 Ga0070660_100446624
386 Ga0070660_100711004
387 Ga0070689_100052463
388 Ga0070691_10003502
389 Ga0070691_10004590
390 Ga0070691_10013088
391 Ga0070661_100011681
392 Ga0070661_100015272
393 Ga0070661_100021905
394 Ga0070661_100091798
395 Ga0070692_10000052
396 Ga0070692_10009339
397 Ga0070692_10090415
398 Ga0070692_10101979
399 Ga0070675_100017909
400 Ga0070675_100806807
401 Ga0070671_100138420
402 Ga0070674_100057084
403 Ga0070659_100027228
404 Ga0070659_100280375
405 Ga0070663_100002503
406 Ga0070663_100021325
407 Ga0070663_100036104
408 Ga0070662_100060469
409 Ga0070681_10000076
410 Ga0070681_10000659
411 Ga0070681_10002191
412 Ga0070681_10007385
413 Ga0070681_10123618
414 Ga0070679_100000504
415 Ga0070679_100002148
416 Ga0070679_100002491
417 Ga0070679_100142729
418 Ga0070684_100111052
419 Ga0070684_100257326
420 Ga0068853_100031776
421 Ga0068853_100122805
422 Ga0068853_100202575
423 Ga0070696_100009116
424 Ga0070696_100102720
425 Ga0070693_100013696
426 Ga0070665_100306978
427 Ga0068855_100026753
428 Ga0068855_100180750
429 Ga0068855_100478677
430 Ga0068855_100623078
431 Ga0070664_100067120
432 Ga0068854_100004867
433 Ga0068854_100008112
434 Ga0068854_100224945
435 Ga0068854_100257724
436 Ga0068856_100466478
437 Ga0068852_100137718
438 Ga0068851_10007874
439 Ga0068860_100889926
440 Ga0068862_100037735
441 Ga0075364_10000141
442 Ga0075364_10026229
443 Ga0075428_100000614
444 Ga0075428_100595551
445 Ga0075429_100035993
446 Ga0075435_100363984
447 Ga0105240_10121522
448 Ga0105240_10169886
449 Ga0111539_10148114
450 Ga0111539_10162629
451 Ga0111539_11131895
452 Ga0105245_10072828
453 Ga0105238_10500174
454 Ga0105028_111436
455 Ga0157373_10010745
456 Ga0157373_10018339
457 Ga0157373_10214214
458 Ga0157373_10509465
459 Ga0157373_10693677
460 Ga0157371_10043167
461 Ga0157371_10117878
462 Ga0157370_10004947
463 Ga0157370_10005521
464 Ga0157370_10037989
465 Ga0157370_10118609
466 Ga0157370_10260201
467 Ga0157369_10012834
468 Ga0157369_10380733
469 Ga0157372_10113677
470 Ga0182006_1058203
471 Ga0206356_11531219
472 Ga0206354_10606333
473 Ga0206353_10256666
474 Ga0206353_10358202
475 Ga0206353_10409696
476 Ga0207425_1000044
477 Ga0209129_1000044
478 Ga0209025_1000012
479 Ga0209758_1000018
480 Ga0207656_10026412
481 Ga0207647_10002058
482 Ga0207647_10009668
483 Ga0207705_10000146
484 Ga0207705_10000373
485 Ga0207705_10000788
486 Ga0207705_10004997
487 Ga0207705_10012657
488 Ga0207707_10000018
489 Ga0207707_10000036
490 Ga0207707_10000333
491 Ga0207707_10000725
492 Ga0207707_10000844
493 Ga0207707_10001158
494 Ga0207707_10002702
495 Ga0207707_10024357
496 Ga0207707_10079205
497 Ga0207695_10002127
498 Ga0207695_10002823
499 Ga0207695_10006716
500 Ga0207695_10045916
501 Ga0207695_10112034
502 Ga0207671_10069608
503 Ga0207660_10001193
504 Ga0207660_10002549
505 Ga0207660_10003487
506 Ga0207660_10004764
507 Ga0207660_10009318
508 Ga0207660_10011789
509 Ga0207660_10054932
510 Ga0207660_10057847
511 Ga0207657_10010671
512 Ga0207657_10020911
513 Ga0207657_10034979
514 Ga0207657_10035284
515 Ga0207649_10002055
516 Ga0207649_10014217
517 Ga0207652_10000409
518 Ga0207652_10000492
519 Ga0207652_10001049
520 Ga0207652_10001843
521 Ga0207652_10010990
522 Ga0207652_10090391
523 Ga0207652_10090800
524 Ga0207694_10006155
525 Ga0207659_10656917
526 Ga0207687_10435231
527 Ga0207690_10004199
528 Ga0207690_10018814
529 Ga0207690_10062683
530 Ga0207706_10006462
531 Ga0207706_10480364
532 Ga0207670_10070899
533 Ga0207691_10156529
534 Ga0207689_10181711
535 Ga0207661_10012843
536 Ga0207661_10529228
537 Ga0207679_10089245
538 Ga0207667_10000493
539 Ga0207667_10000947
540 Ga0207667_10013506
541 Ga0207667_10015946
542 Ga0207667_10220237
543 Ga0207640_10001251
544 Ga0207640_10002435
545 Ga0207640_10003568
546 Ga0207640_10010905
547 Ga0207640_10078168
548 Ga0207639_10001482
549 Ga0207639_10439741
550 Ga0207678_10006217
551 Ga0207678_10006373
552 Ga0207678_10048218
553 Ga0207678_10264062
554 Ga0207708_10183152
555 Ga0207702_10005859
556 Ga0207702_10090465
557 Ga0207702_10103074
558 Ga0207674_10008704
559 Ga0207674_10010526
560 Ga0207698_10000617
561 Ga0207698_10000910
562 Ga0209371_1000004
563 Ga0209974_10006856
564 Ga0207428_10005761
565 Ga0268265_10103837
566 Ga0268256_1000005
567 Ga0307408_100002164
568 Ga0307408_100030606
569 Ga0316575_10049366
570 Ga0316577_10024881
571 Ga0307410_10167193
572 Ga0307407_10125328
573 Ga0307416_100093427
574 Ga0307414_10348762
575 Ga0307414_10477796
576 Ga0307411_10501485
577 Ga0316583_10005790
578 Ga0316587_1003774
579 Ga0373952_0000972
580 Ga0373960_0033530
581 Ga0316574_0158154
582 Ga0316582_0051664
583 Ga0316584_0042271
584 Ga0395899_0021178
585 Ga0395899_0031346
586 Ga0395899_0223274
587 Ga0395900_0000033
588 Ga0395900_0001828
589 Ga0395900_0034366
590 Ga0395900_0037620
591 Ga0395900_0093539
592 Ga0395900_0485603
593 Ga0395898_0063131
594 Ga0395898_0267895
595 Ga0395898_0299013
596 Ga0395905_0002534
597 Ga0395905_0027770
598 Ga0395905_0051239
599 Ga0395905_0225020
600 Ga0395901_0019774
601 Ga0395901_0388421
602 Ga0237819_00943
603 Ga0400490_19582
604 Ga0400488_63605
605 Ga0400483_102854
606 Ga0400489_09548
607 Ga0450905_016417
608 Ga0453683_0138540
609 Ga0451576_0008876
610 Ga0451576_0031848
611 Ga0495648_0001042
612 Ga0495672_0000396
613 Ga0495683_0000827
614 Ga0495683_0074455
615 Ga0495673_0000002
616 Ga0495681_0057856
617 Ga0495686_0005748
618 Ga0496100_0147248
619 Ga0496113_0027766
620 Ga0496123_0003662
621 Ga0495682_0011887
622 Ga0495682_0012537
623 Ga0501032_0406445
624 Ga0501033_0128975
625 Ga0501036_0393017
626 Ga0501036_0412434
627 Ga0501037_0072888
628 Ga0501037_0098235
629 Ga0501038_0073194
630 Ga0501039_0018139
631 Ga0501039_0061232
632 Ga0501041_0010443
633 Ga0501042_0157514
634 Ga0501043_0017272
635 Ga0501043_0375128
636 Ga0501046_0022428
637 Ga0501046_0061726
638 Ga0501047_0023500
639 Ga0501048_0167386
640 Ga0501069_0003711
641 Ga0501069_0009668
642 Ga0501069_0013405
643 Ga0501069_0040567
644 Ga0501069_0106887
645 Ga0501069_0161249
646 Ga0501070_0000553
647 Ga0501070_0002909
648 Ga0501070_0009236
649 Ga0501070_0009845
650 Ga0501070_0013614
651 Ga0501070_0026957
652 Ga0501070_0075993
653 Ga0501070_0083616
654 Ga0501070_0188476
655 Ga0501070_0202370
656 Ga0501070_0333222
657 Ga0501070_0714917
658 Ga0501071_0010172
659 Ga0501071_0016174
660 Ga0501072_0143912
661 Ga0501073_0000408
662 Ga0501073_0027494
663 Ga0501074_0001149
664 Ga0501074_0002304
665 Ga0501074_0003215
666 Ga0501075_0018254
667 Ga0501075_0058557
668 Ga0501076_0001354
669 Ga0501077_0002638
670 Ga0501198_015396
671 Ga0501079_0001927
672 Ga0501079_0160185
673 Ga0501079_0357398
674 Ga0501080_0008660
675 Ga0501080_0011008
676 Ga0501080_0016247
677 Ga0501080_0103264
678 Ga0501080_0147133
679 Ga0501081_0002347
680 Ga0501035_0003972
681 Ga0501035_0017239
682 Ga0501035_0041426
683 Ga0501035_0134055
684 Ga0501044_0011190
685 Ga0501044_0021092
686 Ga0501044_0046766
687 Ga0501044_0092364
688 Ga0501045_0373189
689 nmdc:mga00v17_88_c1
690 nmdc:mga09592_9001_c1
691 nmdc:mga08y16_242717_c1
692 nmdc:mga08y16_5452_c1
693 Ga0501082_0016920
694 2526210716
695 2643817570
696 2643940224
697 2644079352
698 2644694796
699 2738714994
700 2748016163
701 2895504014
702 2895515362
703 2895523487
704 2895527858
705 2987606290
706 8001524684

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

29

234

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
7w7a-assembly2.cif.gz_E heme exporter in complex with mn-containing protoporphyrin ix, mn-anomalous data 0.9522 19 236
5xu1-assembly1.cif.gz_B structure of a non-canonical abc transporter from streptococcus pneumoniae r6 0.9471 18 238
8fee-assembly1.cif.gz_H structure of mce1 transporter from mycobacterium smegmatis in the absence of lucb (map2) 0.9457 20 239
5xu1-assembly1.cif.gz_A structure of a non-canonical abc transporter from streptococcus pneumoniae r6 0.9429 18 238
5ws4-assembly1.cif.gz_B crystal structure of tripartite-type abc transporter macb from acinetobacter baumannii 0.9418 18 244
ID Description Score Start End Superfamily
af_P0A9T8_2_228_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9727 18 241 3.40.50.300
af_P9WQK1_1_231_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9621 15 244 3.40.50.300
af_P14175_33_289_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9613 38 239 3.40.50.300
af_Q2FUZ1_1_243_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9601 19 238 3.40.50.300
af_P75957_1_229_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9584 18 243 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A2D4VMT8-F1-model_v4 ABC transporter 0.975 18 240 GO:0005524
GO:0005886
GO:0016887
GO:0022857
GO:0044874
GO:0089705
AF-A0A3B9DJY8-F1-model_v4 deleted 0.9604 16 189
AF-A0A136QMT0-F1-model_v4 deleted 0.9592 18 120
AF-A0A534G8T3-F1-model_v4 ATP-binding cassette domain-containing protein 0.9575 18 126 GO:0005524
GO:0016887
AF-A0A3D3VDK4-F1-model_v4 Cell division ATP-binding protein FtsE 0.9561 18 173 GO:0005524
GO:0005886
GO:0016887
GO:0022857
GO:0051301

Map