F419457

General Info

Members Datasets Scaffolds Average Seq Length
353 249 281 878

Family's Representative Sequence

Representative Sequence 3300037466|Ga0395898_0039540|Ga0395898_0039540_836_3592
Length 918
Sequence VSEISRVALFGKLNPIAYKGIEGATVFCKLRGNPYVELVHWLHQLIQASDSDLHRIFKHFSLDASRLAADITTALDALPRGATSISDFSPVIEKMVQEGWLYGTLQYGESAVRTGLLMVGAVKTQTLRNALYAISAEFRKVKPDDLFDDFAKIVAGSPEDTLAARDGSNVGGGAAPGEASGAIAPAQMGKQEALKKFTVDLTAQARSGKMDPIVGRDDEIRQVVDILMRRRQNNPILVGEAGVGKTAVVEGFAQRIVRGDVPPSLKEVQLLALDVGLLQAGASMKGEFEQRLRSVIDEVQASPKPIILFIDETHTLVGAGGAAGTGDAANLLKPALARGQLRTIGATTWAEYKKHIEKDPALTRRFQNVQVDEPSEAKAILMMRGVASTMEKHHKVQILDEALEAAVKLSHRYIPARQLPDKSVSLLDTASARVAISLHAVPAEVDDSQRRIEALETEIGIIAREAAIGIPTAEREEAVNALLATEKDRLATLTKRWNDEKRLVDRLLSLRAKLRDGVNPVEGTGSALEASAEKAAEASQATLSEGGSAPKLTAGERADVMTELRGVQDELTKLQGESPLMLPTVDFQAVASVVGDWTGIPVGRMAANEIDTVLKLPSLLGKRVIGQDHAMEMISKRIQTSRAGLDNPNKPIGVFMLAGTSGVGKTETALALAEALYGGEQNLITINMSEYQEAHTVSSLKGAPPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHSDVHELFFQVFDKGWMEDGEGRQIDFKNTLILLTTNAGTEMIANLCKDPDLMPDPEGMAKAIREPLLKIFPPALLGRLVTIPYYPLSDEMLGKIVELQLDRIKKRVEARYKMPFNVDADVVKLVVGRCTESESGGRMIDAILTNTMLPEISREFLERMMKGEAIKGVKVGIKDNEFSYSFD

Samples

Sample ID Description Type Environment
1 2508501071 Serratia proteamaculans S4 Isolate Rhizosphere
2 2508501125 Burkholderia sp. WSM2232 Isolate Nodule
3 2537561728 Pectobacterium wasabiae CFBP 3304 Isolate Rhizoplane
4 2547132181 Kosakonia sacchari SP1 Isolate Stem
5 2561511199 Enterobacter sp. R4-368 Isolate Nodule
6 2585428057 Methylibium sp. YR605 Isolate Rhizosphere
7 2585428058 Methylibium sp. CF468 Isolate Rhizosphere
8 2588253510 Rhizobacter sp. OV335 Isolate Rhizosphere
9 2599185299 Pantoea ananatis NFR11 Isolate Rhizoplane
10 2600255256 Enterobacter sp. NFIX08 Isolate Rhizoplane
11 2600255257 Enterobacter sp. NFIX03 Isolate Rhizoplane
12 2600255310 Enterobacter sp. NFIX06 Isolate Rhizoplane
13 2600255311 Enterobacter sp. NFIX04 Isolate Rhizoplane
14 2602042046 Enterobacter sp. NFIX09 Isolate Rhizoplane
15 2602042047 Enterobacter sp. NFIX59 Isolate Rhizoplane
16 2602042066 Enterobacter sp. NFIX45 Isolate Rhizoplane
17 2602042067 Enterobacter sp. NFIX58 Isolate Rhizoplane
18 2602042109 Klebsiella aerogenes NFIX39 Isolate Rhizoplane
19 2608642108 Pantoea agglomerans NFPP29 Isolate Rhizoplane
20 2609459761 Enterobacter sp. NFR05 Isolate Rhizoplane
21 2643221592 Rhizobacter sp. Root16D2 Isolate Unclassified
22 2643221625 Rhizobacter sp. Root29 Isolate Unclassified
23 2643221648 Rhizobacter sp. Root1238 Isolate Unclassified
24 2648501693 Pantoea ananatis B1-9 Isolate Rhizosphere
25 2667528172 Enterobacteriaceae bacterium NFIX31 Isolate Rhizoplane
26 2681812866 Enterobacter asburiae NFIX55 Isolate Rhizoplane
27 2681812869 Enterobacter ludwigii NFPP41 Isolate Rhizoplane
28 2684622997 Pantoea ananatis NFIX48 Isolate Rhizoplane
29 2747842501 Xanthomonas sp. WCS2014-23 Isolate Unclassified
30 2751185917 Enterobacter sp. HK169 Isolate Unclassified
31 2765235842 Enterobacter ludwigii AA4 Isolate Unclassified
32 2775506706 Enterobacter asburiae 1216 Isolate Unclassified
33 2791354903 Mangrovibacter phragmitis MP23 Isolate Unclassified
34 2791355010 Kosakonia pseudosacchari NN143 Isolate Unclassified
35 2806310673 Serratia quinivorans NCTC 13189 Isolate Rhizosphere
36 2808606384 Burkholderia sp. SJZ089 Isolate Rhizosphere
37 2808606390 Burkholderia sp. SJZ115 Isolate Rhizosphere
38 2808606391 Burkholderia sp. SJZ091 Isolate Rhizosphere
39 2808606414 Pantoea sp. SJZ147 Isolate Rhizosphere
40 2811995292 Kosakonia oryzae Ola 51 Isolate Unclassified
41 2814123068 Kosakonia radicincitans GXGL-4A Isolate Rhizosphere
42 2821118458 Enterobacter asburiae 609 Isolate Unclassified
43 2823373977 Enterobacter ludwigii NCR3 Isolate Rhizosphere
44 2844425489 Enterobacter cloacae SBP-8 Isolate Rhizosphere
45 2844528606 Pantoea sp. R-72498 v. 2 Isolate Unclassified
46 2847797336 Pantoea ananatis NN08200 Isolate Unclassified
47 2865014394 Pantoea sp. R-71966 Isolate Unclassified
48 2871282230 Pectobacterium parmentieri SS90 Isolate Stem Tuber
49 2881609920 Pantoea sp. ARC607 Isolate Rhizosphere
50 2900051742 Pectobacterium zantedeschiae 2M Isolate Stem Tuber
51 2923634449 Enterobacter kobei SLBN-76 Isolate Rhizosphere
52 2927833300 Enterobacter sp. SLBN-59 Isolate Rhizosphere
53 2932406140 Serratia sp. 2723 Isolate Rhizosphere
54 2935625433 Kosakonia sp. 1610 Isolate Rhizosphere
55 2937539931 Pantoea sp. LS15 Isolate Unclassified
56 2939577877 Serratia sp. 509 Isolate Rhizosphere
57 2939602548 Pantoea dispersa 1175 Isolate Rhizosphere
58 2939617950 Kosakonia cowanii 2056 Isolate Rhizosphere
59 2945874760 Phytobacter diazotrophicus UAEU22 Isolate Rhizosphere
60 2945951305 Pantoea agglomerans W2I1 Isolate Rhizosphere
61 2974310843 Enterobacter sp. SORGH_AS 287 Isolate Unclassified
62 2974435778 Kosakonia cowanii SORGH_AS 304 Isolate Unclassified
63 2978975091 Pantoea anthophila SORGH_AS 797 Isolate Unclassified
64 2984494565 Pantoea ananatis SORGH_AS197 Isolate Aerial Root
65 2990261002 Pantoea ananatis SORGH_AS213 Isolate Aerial Root
66 3000376612 Enterobacteriaceae bacterium 4M9 Isolate Rhizosphere
67 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
68 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
69 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
70 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
71 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
72 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
73 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
74 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
75 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
76 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
77 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
78 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
79 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
80 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
81 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
82 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
83 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
84 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
85 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
86 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
87 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
88 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
89 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
90 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
91 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
92 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
93 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
94 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
95 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
96 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
97 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
98 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
99 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
100 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
101 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
102 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
103 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
104 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
105 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
106 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
107 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
108 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
109 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
110 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
111 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
112 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
113 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
114 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
115 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
116 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
117 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
118 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
119 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
120 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
121 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
122 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
123 3300015679 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.4_F08 Metagenome Unclassified
124 3300015680 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.2_H03 Metagenome Rhizosphere
125 3300015685 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.5_G12 Metagenome Unclassified
126 3300015687 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 002.1_G08 Metagenome Rhizosphere
127 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
128 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
129 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
130 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
131 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
132 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
133 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
134 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
135 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
136 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
137 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
138 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
139 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
140 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
141 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
142 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
143 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
144 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
145 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
146 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
147 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
148 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
149 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
150 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
151 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
152 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
153 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
154 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
155 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
156 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
157 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
158 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
159 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
160 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
161 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
162 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
163 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
164 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
165 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
166 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
167 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
168 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
169 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
170 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
171 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
172 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
173 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
174 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
175 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
176 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
177 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
178 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
179 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
180 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
181 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
182 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
183 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
184 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
185 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
186 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
187 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
188 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
189 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
190 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
191 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
192 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
193 3300044669 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2E Metagenome Unclassified
194 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
195 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
196 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
197 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
198 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
199 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
200 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
201 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
202 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
203 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
204 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
205 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
206 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
207 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
208 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
209 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
210 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
211 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
212 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
213 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
214 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
215 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
216 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
217 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
218 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
219 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
220 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
221 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
222 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
223 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
224 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
225 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
226 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
227 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
228 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
229 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
230 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
231 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
232 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
233 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
234 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
235 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
236 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
237 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
238 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
239 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
240 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
241 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
242 3300053126 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 endosphere Metagenome Endosphere
243 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
244 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
245 640753048 Serratia proteamaculans 568 Isolate Endosphere
246 643348564 Methylobacterium nodulans ORS 2060 Isolate Nodule
247 8018221730 Enterobacter sp. CM29 Isolate Unclassified
248 8018405270 Enterobacter sp. 198 Isolate Rhizosphere
249 8019504834 Atlantibacter hermannii 1903 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 79.32
Metatranscriptomes 0.28
Isolates 20.4

Biome Distribution

Category Percentage (%)
Aerial Root 0.57
Bulb 0
Endosphere 7.37
Nodule 2.83
Rhizoplane 5.95
Rhizosphere 58.36
Stem 0.28
Stem Tuber 0.57
Unclassified 24.08

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25156J39149_1000484 3300002705 Bacteria 23873
2 JGI25157J39369_1000018 3300002741 Bacteria 177410
3 JGI25152J39213_1000279 3300002773 Bacteria 34124
4 rootH1_10008217 3300003323 Bacteria 4809
5 Ga0006562J51391_1106572 3300003578 Bacteria 4440
6 Ga0055539_1000409 3300003752 Bacteria 16463
7 Ga0055533_1000011 3300003756 Bacteria 467893
8 Ga0055535_1000107 3300003761 Bacteria 89840
9 Ga0055529_1000111 3300003763 Bacteria 118734
10 Ga0055526_1000924 3300003771 Bacteria 21812
11 Ga0058692_1000341 3300003856 Bacteria 22814
12 Ga0058692_1000671 3300003856 Bacteria 14094
13 Ga0058692_1002491 3300003856 Bacteria 6140
14 Ga0058692_1002997 3300003856 Bacteria 5410
15 Ga0065165_1003922 3300005262 Bacteria 9808
16 Ga0065704_10000283 3300005289 Bacteria 60422
17 Ga0070676_10018669 3300005328 Bacteria 3846
18 Ga0070690_100004139 3300005330 Bacteria 8023
19 Ga0068869_100006362 3300005334 Bacteria 7484
20 Ga0070689_100000261 3300005340 Bacteria 30349
21 Ga0070687_100000663 3300005343 Bacteria 11468
22 Ga0070673_100013041 3300005364 Bacteria 5733
23 Ga0070701_10007144 3300005438 Bacteria 4748
24 Ga0070705_100000190 3300005440 Bacteria 35979
25 Ga0068867_100000726 3300005459 Bacteria 22047
26 Ga0068867_100000854 3300005459 Bacteria 20571
27 Ga0068867_100017816 3300005459 Bacteria 5044
28 Ga0070696_100000902 3300005546 Bacteria 19284
29 Ga0070693_100000551 3300005547 Bacteria 16692
30 Ga0070665_100002103 3300005548 Bacteria 22299
31 Ga0068854_100005542 3300005578 Bacteria 7976
32 Ga0070702_100000025 3300005615 Bacteria 43492
33 Ga0068859_100001957 3300005617 Bacteria 21008
34 Ga0068864_100030750 3300005618 Bacteria 4553
35 Ga0068866_10000192 3300005718 Bacteria 28591
36 Ga0068861_100000170 3300005719 Bacteria 34422
37 Ga0068861_100001815 3300005719 Bacteria 13750
38 Ga0068861_100012687 3300005719 Bacteria 5880
39 Ga0068858_100001021 3300005842 Bacteria 28873
40 Ga0068860_100000602 3300005843 Bacteria 42928
41 Ga0068860_100002018 3300005843 Bacteria 21421
42 Ga0068862_100000867 3300005844 Bacteria 29583
43 Ga0097621_100004355 3300006237 Bacteria 9844
44 Ga0097621_100004453 3300006237 Bacteria 9753
45 Ga0068871_100000960 3300006358 Bacteria 19285
46 Ga0075428_100001630 3300006844 Bacteria 23946
47 Ga0075430_100000716 3300006846 Bacteria 25364
48 Ga0075431_100028942 3300006847 Bacteria 5697
49 Ga0075429_100001594 3300006880 Bacteria 18685
50 Ga0068865_100001129 3300006881 Bacteria 15462
51 Ga0097620_100001957 3300006931 Bacteria 21008
52 Ga0079104_1000039 3300006946 Bacteria 188434
53 Ga0079104_1001273 3300006946 Bacteria 17481
54 Ga0079104_1005356 3300006946 Bacteria 5149
55 Ga0075435_100000235 3300007076 Bacteria 33986
56 Ga0075435_100049234 3300007076 Bacteria 3388
57 Ga0105251_10003440 3300009011 Bacteria 11484
58 Ga0105251_10010074 3300009011 Bacteria 5518
59 Ga0105251_10013487 3300009011 Bacteria 4570
60 Ga0105244_10000079 3300009036 Bacteria 107070
61 Ga0105244_10000200 3300009036 Bacteria 61029
62 Ga0105244_10009468 3300009036 Bacteria 5988
63 Ga0105245_10001347 3300009098 Bacteria 22267
64 Ga0114129_10009086 3300009147 Bacteria 14162
65 Ga0105243_10001047 3300009148 Bacteria 25331
66 Ga0105242_10000503 3300009176 Bacteria 30867
67 Ga0105242_10004746 3300009176 Bacteria 10524
68 Ga0105248_10043047 3300009177 Bacteria 5064
69 Ga0157371_10002959 3300013102 Bacteria 15798
70 Ga0157370_10001735 3300013104 Bacteria 26842
71 Ga0157370_10016914 3300013104 Bacteria 7373
72 Ga0157369_10011322 3300013105 Bacteria 10132
73 Ga0157378_10000348 3300013297 Bacteria 45594
74 Ga0163162_10003947 3300013306 Bacteria 14226
75 Ga0183366_1001 3300015679 Bacteria 2743932
76 Ga0183370_1001 3300015680 Bacteria 2743932
77 Ga0183369_1001 3300015685 Bacteria 2743932
78 Ga0183368_1001 3300015687 Bacteria 2743932
79 Ga0163161_10020207 3300017792 Bacteria 4672
80 Ga0213872_10000187 3300021361 Bacteria 55101
81 Ga0213872_10002430 3300021361 Bacteria 10975
82 Ga0213876_10000016 3300021384 Bacteria 300175
83 Ga0213876_10000155 3300021384 Bacteria 72486
84 Ga0209674_100003 3300025226 Bacteria 2196646
85 Ga0209563_100010 3300025230 Bacteria 1337457
86 Ga0207427_100392 3300025231 Bacteria 26004
87 Ga0209437_100035 3300025233 Bacteria 481110
88 Ga0209258_100267 3300025242 Bacteria 89896
89 Ga0209258_101147 3300025242 Bacteria 10870
90 Ga0209646_1000188 3300025246 Bacteria 76972
91 Ga0209026_1000033 3300025250 Bacteria 318512
92 Ga0209677_100068 3300025253 Bacteria 146135
93 Ga0209677_100159 3300025253 Bacteria 61322
94 Ga0209759_1000024 3300025256 Bacteria 318512
95 Ga0209759_1001433 3300025256 Bacteria 13486
96 Ga0209759_1001545 3300025256 Bacteria 12611
97 Ga0209129_1000004 3300025258 Bacteria 884499
98 Ga0209455_1000158 3300025272 Bacteria 118973
99 Ga0209673_1006251 3300025273 Bacteria 5802
100 Ga0209564_1000005 3300025295 Bacteria 1147192
101 Ga0209758_1001020 3300025297 Bacteria 37059
102 Ga0209050_1000143 3300025298 Bacteria 171806
103 Ga0209051_1002211 3300025303 Bacteria 14368
104 Ga0207655_1000188 3300025728 Bacteria 109393
105 Ga0207655_1000198 3300025728 Bacteria 106261
106 Ga0207655_1006457 3300025728 Bacteria 7764
107 Ga0207655_1008770 3300025728 Bacteria 6366
108 Ga0207713_1000001 3300025735 Bacteria 2295391
109 Ga0207713_1000191 3300025735 Bacteria 85634
110 Ga0207653_10000577 3300025885 Bacteria 13135
111 Ga0207642_10004326 3300025899 Bacteria 4578
112 Ga0207660_10050495 3300025917 Bacteria 2953
113 Ga0207662_10000248 3300025918 Bacteria 24985
114 Ga0207657_10013224 3300025919 Bacteria 8100
115 Ga0207652_10010203 3300025921 Bacteria 7560
116 Ga0207686_10002114 3300025934 Bacteria 10943
117 Ga0207670_10008360 3300025936 Bacteria 5837
118 Ga0207704_10003588 3300025938 Bacteria 7045
119 Ga0207689_10000189 3300025942 Bacteria 53499
120 Ga0207651_10009827 3300025960 Bacteria 5265
121 Ga0207708_10017743 3300026075 Bacteria 5358
122 Ga0207702_10010579 3300026078 Bacteria 7711
123 Ga0207648_10000301 3300026089 Bacteria 53771
124 Ga0207648_10000582 3300026089 Bacteria 40973
125 Ga0207674_10001989 3300026116 Bacteria 25903
126 Ga0207675_100000161 3300026118 Bacteria 59262
127 Ga0207675_100000601 3300026118 Bacteria 35110
128 Ga0207675_100009930 3300026118 Bacteria 8911
129 Ga0209281_1000133 3300027111 Bacteria 188455
130 Ga0209281_1000345 3300027111 Bacteria 77851
131 Ga0209281_1000444 3300027111 Bacteria 59309
132 Ga0209281_1002848 3300027111 Bacteria 6323
133 Ga0209371_1000001 3300027312 Bacteria 2771503
134 Ga0209371_1000002 3300027312 Bacteria 1551985
135 Ga0209371_1000052 3300027312 Bacteria 274444
136 Ga0209371_1000057 3300027312 Bacteria 238850
137 Ga0209371_1000489 3300027312 Bacteria 38581
138 Ga0209371_1000595 3300027312 Bacteria 32392
139 Ga0209371_1001031 3300027312 Bacteria 21056
140 Ga0209371_1001566 3300027312 Bacteria 15049
141 Ga0209371_1002432 3300027312 Bacteria 10441
142 Ga0209371_1002472 3300027312 Bacteria 10291
143 Ga0209371_1003178 3300027312 Bacteria 8310
144 Ga0209371_1007079 3300027312 Bacteria 3992
145 Ga0209371_1011238 3300027312 Bacteria 2673
146 Ga0207428_10002606 3300027907 Bacteria 18005
147 Ga0268266_10000869 3300028379 Bacteria 39317
148 Ga0268265_10002660 3300028380 Bacteria 13249
149 Ga0268264_10004388 3300028381 Bacteria 12038
150 Ga0268264_10015554 3300028381 Bacteria 6237
151 Ga0265336_10000008 3300028666 Bacteria 336082
152 Ga0307515_10000085 3300028794 Bacteria 220502
153 Ga0307515_10000705 3300028794 Bacteria 77144
154 Ga0265324_10000232 3300029957 Bacteria 42039
155 Ga0268256_1000001 3300030500 Bacteria 2771065
156 Ga0268256_1000002 3300030500 Bacteria 1535763
157 Ga0268256_1000061 3300030500 Bacteria 216116
158 Ga0268256_1000414 3300030500 Bacteria 38582
159 Ga0268256_1001302 3300030500 Bacteria 15374
160 Ga0268256_1001856 3300030500 Bacteria 11723
161 Ga0268256_1003566 3300030500 Bacteria 6951
162 Ga0268256_1007233 3300030500 Bacteria 3992
163 Ga0268256_1012196 3300030500 Bacteria 2672
164 Ga0307508_10000215 3300031616 Bacteria 70109
165 Ga0307514_10001733 3300031649 Bacteria 24980
166 Ga0307516_10000517 3300031730 Bacteria 51613
167 Ga0307412_10000226 3300031911 Bacteria 37690
168 Ga0373926_0000254 3300035083 Bacteria 12825
169 Ga0373924_0006620 3300035410 Bacteria 4156
170 Ga0373931_0014119 3300035691 Bacteria 3900
171 Ga0395898_0039540 3300037466 Bacteria 4669
172 Ga0395905_0072612 3300037471 Bacteria 3226
173 Ga0395901_0007959 3300038443 Bacteria 10696
174 Ga0436365_1190722 3300039437 Bacteria 68726
175 Ga0436365_1910565 3300039437 Bacteria 475219
176 Ga0436361_0471302 3300039447 Bacteria 5935
177 Ga0436361_1024184 3300039447 Bacteria 85708
178 Ga0439438_000908 3300041405 Bacteria 13156
179 Ga0439438_005718 3300041405 Bacteria 4524
180 Ga0439447_000216 3300041407 Bacteria 20361
181 Ga0439447_007739 3300041407 Bacteria 3381
182 Ga0439466_0000023 3300041411 Bacteria 84850
183 Ga0439432_005463 3300042006 Bacteria 4573
184 Ga0439452_000001 3300042010 Bacteria 1725439
185 Ga0439452_000022 3300042010 Bacteria 267565
186 Ga0439452_000025 3300042010 Bacteria 228862
187 Ga0439452_000264 3300042010 Bacteria 34844
188 Ga0439452_000342 3300042010 Bacteria 28865
189 Ga0450907_000087 3300042146 Bacteria 36820
190 Ga0451577_0011713 3300042876 Bacteria 8280
191 Ga0466981_0000012 3300044669 Bacteria 130373
192 Ga0453684_0010420 3300044712 Bacteria 15902
193 Ga0451576_0001542 3300045051 Bacteria 38781
194 Ga0495603_0003140 3300046455 Bacteria 9820
195 Ga0495591_002114 3300046458 Bacteria 11433
196 Ga0495650_0000088 3300046471 Bacteria 234769
197 Ga0495650_0000139 3300046471 Bacteria 170659
198 Ga0495580_0003753 3300046472 Bacteria 12862
199 Ga0495583_0000558 3300046506 Bacteria 51961
200 Ga0495606_0000217 3300046507 Bacteria 101671
201 Ga0495648_0004145 3300046524 Bacteria 12465
202 Ga0495654_0000395 3300046530 Bacteria 37242
203 Ga0495656_0005166 3300046615 Bacteria 4502
204 Ga0495671_0005593 3300046692 Bacteria 7334
205 Ga0495649_0006333 3300046694 Bacteria 7368
206 Ga0495589_0000187 3300046794 Bacteria 54899
207 Ga0495589_0003907 3300046794 Bacteria 8000
208 Ga0495660_0000034 3300046810 Bacteria 201261
209 Ga0495672_0000043 3300047320 Bacteria 266893
210 Ga0495672_0000047 3300047320 Bacteria 246926
211 Ga0495676_0021195 3300047321 Bacteria 5683
212 Ga0495679_001327 3300047446 Bacteria 14355
213 Ga0495673_0000162 3300047469 Bacteria 114710
214 Ga0496102_0020604 3300048905 Bacteria 5827
215 Ga0496104_0001541 3300048907 Bacteria 19899
216 Ga0496105_0008542 3300048908 Bacteria 7957
217 Ga0496113_0028393 3300048916 Bacteria 4024
218 Ga0496116_0000181 3300048919 Bacteria 126124
219 Ga0496116_0000372 3300048919 Bacteria 67435
220 Ga0496116_0001210 3300048919 Bacteria 30124
221 Ga0496116_0008346 3300048919 Bacteria 9001
222 Ga0496117_0000004 3300048920 Bacteria 877131
223 Ga0496117_0000602 3300048920 Bacteria 58964
224 Ga0496117_0000957 3300048920 Bacteria 44158
225 Ga0496117_0002106 3300048920 Bacteria 26181
226 Ga0496118_0000232 3300048921 Bacteria 97818
227 Ga0496118_0000422 3300048921 Bacteria 70289
228 Ga0496118_0002566 3300048921 Bacteria 24270
229 Ga0496118_0008663 3300048921 Bacteria 10462
230 Ga0496118_0011450 3300048921 Bacteria 8655
231 Ga0496119_0000001 3300048922 Bacteria 789520
232 Ga0496119_0000064 3300048922 Bacteria 167571
233 Ga0496119_0000391 3300048922 Bacteria 60498
234 Ga0496119_0019782 3300048922 Bacteria 4938
235 Ga0496120_0000038 3300048923 Bacteria 204168
236 Ga0496120_0000067 3300048923 Bacteria 167571
237 Ga0496120_0000317 3300048923 Bacteria 79762
238 Ga0496120_0000507 3300048923 Bacteria 60644
239 Ga0496120_0002874 3300048923 Bacteria 16517
240 Ga0496120_0003802 3300048923 Bacteria 13301
241 Ga0496120_0005175 3300048923 Bacteria 10533
242 Ga0496120_0006818 3300048923 Bacteria 8653
243 Ga0496121_0000047 3300048924 Bacteria 335768
244 Ga0496121_0000617 3300048924 Bacteria 66238
245 Ga0496121_0008254 3300048924 Bacteria 12325
246 Ga0496121_0010318 3300048924 Bacteria 10561
247 Ga0496122_0000187 3300048925 Bacteria 143921
248 Ga0496122_0003982 3300048925 Bacteria 18842
249 Ga0496122_0004774 3300048925 Bacteria 16587
250 Ga0496122_0029937 3300048925 Bacteria 4574
251 Ga0496123_0000095 3300048926 Bacteria 176621
252 Ga0496123_0000620 3300048926 Bacteria 59624
253 Ga0496123_0002357 3300048926 Bacteria 23687
254 Ga0496123_0006569 3300048926 Bacteria 11239
255 Ga0496123_0025028 3300048926 Bacteria 4513
256 Ga0496124_0005725 3300048927 Bacteria 13843
257 Ga0496124_0010096 3300048927 Bacteria 9625
258 Ga0496125_0000562 3300048928 Bacteria 63936
259 Ga0496125_0004819 3300048928 Bacteria 15336
260 Ga0496126_0000699 3300048929 Bacteria 61279
261 Ga0496126_0025346 3300048929 Bacteria 5706
262 Ga0495682_0000003 3300049460 Bacteria 515787
263 Ga0501032_0000307 3300049569 Bacteria 41251
264 Ga0501046_0012704 3300049580 Bacteria 7161
265 Ga0501046_0016220 3300049580 Bacteria 6245
266 Ga0501047_0013974 3300049581 Bacteria 7630
267 Ga0501047_0127381 3300049581 Bacteria 2426
268 Ga0501035_0002251 3300049822 Bacteria 19101
269 Ga0501044_0000450 3300049823 Bacteria 50131
270 nmdc:mga00v17_904_c1 3300050491 Bacteria 16029
271 nmdc:mga05p37_671_c1 3300050507 Bacteria 37800
272 nmdc:mga09592_3045_c1 3300050508 Bacteria 13601
273 nmdc:mga09592_454_c1 3300050508 Bacteria 30435
274 nmdc:mga0qj67_8356_c1 3300050509 Bacteria 7677
275 nmdc:mga06r32_15226_c1 3300050510 Bacteria 6985
276 nmdc:mga08y16_7746_c1 3300050511 Bacteria 11251
277 nmdc:mga0n895_9182_c1 3300050512 Bacteria 8638
278 nmdc:mga0rr50_944_c1 3300050513 Bacteria 15720
279 Ga0500621_000008 3300053126 Bacteria 174056
280 Ga0500622_0000671 3300053156 Bacteria 30240
281 Ga0590071_000019 3300059421 Bacteria 42395

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300021384 Ga0213876_10000016 Ga0213876_1000001617 709
2 3300049581 Ga0501047_0127381 Ga0501047_0127381_234_2396 709
3 3300009177 Ga0105248_10043047 Ga0105248_100430473 777
4 3300003578 Ga0006562J51391_1106572 Ga0006562J51391_11065722 834
5 3300041407 Ga0439447_000216 Ga0439447_000216_3585_6194 834
6 3300046524 Ga0495648_0004145 Ga0495648_0004145_1651_4260 834
7 3300048908 Ga0496105_0008542 Ga0496105_0008542_2180_4789 834
8 3300048923 Ga0496120_0005175 Ga0496120_0005175_1726_4335 834
9 3300041411 Ga0439466_0000023 Ga0439466_0000023_2877_5486 835
10 3300042146 Ga0450907_000087 Ga0450907_000087_30546_33155 835
11 3300047320 Ga0495672_0000043 Ga0495672_0000043_256418_259027 835
12 3300047446 Ga0495679_001327 Ga0495679_001327_6477_9086 835
13 3300048922 Ga0496119_0000064 Ga0496119_0000064_103253_105862 835
14 3300048923 Ga0496120_0000067 Ga0496120_0000067_61711_64320 835
15 3300048924 Ga0496121_0000047 Ga0496121_0000047_9533_12142 835
16 3300003856 Ga0058692_1002997 Ga0058692_10029972 837
17 3300027312 Ga0209371_1002432 Ga0209371_10024326 837
18 3300030500 Ga0268256_1003566 Ga0268256_10035663 837
19 3300003856 Ga0058692_1000671 Ga0058692_100067110 839
20 3300027312 Ga0209371_1002472 Ga0209371_10024728 839
21 3300030500 Ga0268256_1001856 Ga0268256_10018568 839
22 3300048905 Ga0496102_0020604 Ga0496102_0020604_926_3535 840
23 3300048920 Ga0496117_0000004 Ga0496117_0000004_235512_238121 840
24 3300048921 Ga0496118_0000422 Ga0496118_0000422_14416_17025 840
25 3300048920 Ga0496117_0000602 Ga0496117_0000602_2790_5399 841
26 3300003856 Ga0058692_1000341 Ga0058692_100034115 842
27 3300027312 Ga0209371_1000002 Ga0209371_1000002932 842
28 3300027312 Ga0209371_1000057 Ga0209371_100005769 842
29 3300030500 Ga0268256_1000002 Ga0268256_1000002530 842
30 3300009011 Ga0105251_10013487 Ga0105251_100134873 846
31 3300025233 Ga0209437_100035 Ga0209437_100035471 846
32 3300025728 Ga0207655_1006457 Ga0207655_10064575 846
33 3300025735 Ga0207713_1000001 Ga0207713_1000001774 846
34 3300048921 Ga0496118_0000232 Ga0496118_0000232_50591_53200 846
35 3300048922 Ga0496119_0019782 Ga0496119_0019782_149_2758 846
36 3300048925 Ga0496122_0029937 Ga0496122_0029937_1905_4514 846
37 3300048926 Ga0496123_0000620 Ga0496123_0000620_54339_56948 846
38 3300037471 Ga0395905_0072612 Ga0395905_0072612_281_3028 852
39 3300049580 Ga0501046_0016220 Ga0501046_0016220_52_2775 852
40 3300049569 Ga0501032_0000307 Ga0501032_0000307_37481_40204 853
41 3300049580 Ga0501046_0012704 Ga0501046_0012704_968_3691 853
42 3300049581 Ga0501047_0013974 Ga0501047_0013974_3246_5969 853
43 3300049822 Ga0501035_0002251 Ga0501035_0002251_1077_3800 853
44 3300049823 Ga0501044_0000450 Ga0501044_0000450_37497_40220 853
45 3300009011 Ga0105251_10003440 Ga0105251_100034404 855
46 3300013102 Ga0157371_10002959 Ga0157371_1000295912 855
47 3300013104 Ga0157370_10001735 Ga0157370_100017357 855
48 3300025728 Ga0207655_1008770 Ga0207655_10087703 855
49 3300031911 Ga0307412_10000226 Ga0307412_1000022626 855
50 3300042006 Ga0439432_005463 Ga0439432_005463_507_3116 855
51 3300042010 Ga0439452_000001 Ga0439452_000001_1409796_1412405 855
52 3300048919 Ga0496116_0000372 Ga0496116_0000372_33760_36369 855
53 3300048927 Ga0496124_0010096 Ga0496124_0010096_2746_5355 855
54 3300027312 Ga0209371_1000489 Ga0209371_100048925 857
55 3300030500 Ga0268256_1000414 Ga0268256_100041412 857
56 3300048925 Ga0496122_0000187 Ga0496122_0000187_49087_51696 857
57 3300048926 Ga0496123_0000095 Ga0496123_0000095_92830_95439 857
58 3300039437 Ga0436365_1910565 Ga0436365_1910565_452778_455390 858
59 3300042010 Ga0439452_000264 Ga0439452_000264_4081_6696 858
60 3300005459 Ga0068867_100000726 Ga0068867_1000007267 860
61 3300005843 Ga0068860_100000602 Ga0068860_10000060215 860
62 3300013306 Ga0163162_10003947 Ga0163162_100039475 860
63 3300017792 Ga0163161_10020207 Ga0163161_100202072 860
64 3300025899 Ga0207642_10004326 Ga0207642_100043262 860
65 3300026089 Ga0207648_10000582 Ga0207648_100005828 860
66 3300028380 Ga0268265_10002660 Ga0268265_100026602 860
67 3300028381 Ga0268264_10004388 Ga0268264_100043889 860
68 3300048920 Ga0496117_0000957 Ga0496117_0000957_39891_42500 861
69 3300048921 Ga0496118_0008663 Ga0496118_0008663_1659_4268 861
70 3300002773 JGI25152J39213_1000279 JGI25152J39213_10002793 862
71 3300005719 Ga0068861_100001815 Ga0068861_1000018158 862
72 3300025258 Ga0209129_1000004 Ga0209129_1000004606 862
73 3300026118 Ga0207675_100000601 Ga0207675_1000006016 862
74 3300027312 Ga0209371_1000052 Ga0209371_1000052174 862
75 3300027312 Ga0209371_1011238 Ga0209371_10112381 862
76 3300030500 Ga0268256_1000061 Ga0268256_1000061140 862
77 3300030500 Ga0268256_1012196 Ga0268256_10121961 862
78 3300042010 Ga0439452_000022 Ga0439452_000022_227181_229811 862
79 3300048922 Ga0496119_0000001 Ga0496119_0000001_218225_220855 862
80 3300048926 Ga0496123_0025028 Ga0496123_0025028_1705_4335 862
81 3300048928 Ga0496125_0004819 Ga0496125_0004819_11349_13979 862
82 3300042010 Ga0439452_000342 Ga0439452_000342_16281_18908 863
83 3300003771 Ga0055526_1000924 Ga0055526_10009247 864
84 3300021384 Ga0213876_10000155 Ga0213876_1000015529 864
85 3300025295 Ga0209564_1000005 Ga0209564_1000005652 864
86 3300039437 Ga0436365_1190722 Ga0436365_1190722_41862_44558 864
87 iso_pu_bacteria 2537561728 2538427534 864
88 iso_pu_bacteria 2599185299 2599926216 864
89 iso_pu_bacteria 2608642108 2608669162 864
90 iso_pu_bacteria 2648501693 2650896981 864
91 iso_pu_bacteria 2684622997 2686353875 864
92 iso_pu_bacteria 2808606414 2809125439 864
93 iso_pu_bacteria 2844528606 2844530661 864
94 iso_pu_bacteria 2847797336 2847799272 864
95 iso_pu_bacteria 2865014394 2865018911 864
96 iso_pu_bacteria 2871282230 2871286076 864
97 iso_pu_bacteria 2881609920 2881612977 864
98 iso_pu_bacteria 2900051742 2900051822 864
99 iso_pu_bacteria 2939602548 2939606597 864
100 iso_pu_bacteria 2945951305 2945953300 864
101 iso_pu_bacteria 2978975091 2978975830 864
102 iso_pu_bacteria 2984494565 2984497182 864
103 iso_pu_bacteria 2990261002 2990261136 864
104 iso_pu_bacteria 2600255256 2601533486 865
105 iso_pu_bacteria 2600255257 2601541132 865
106 iso_pu_bacteria 2600255310 2601759630 865
107 iso_pu_bacteria 2600255311 2601763543 865
108 iso_pu_bacteria 2602042046 2603637419 865
109 iso_pu_bacteria 2602042109 2603866854 865
110 iso_pu_bacteria 2609459761 2609910508 865
111 iso_pu_bacteria 2811995292 2813728469 865
112 iso_pu_bacteria 2814123068 2814695975 865
113 iso_pu_bacteria 2945874760 2945878406 865
114 iso_pu_bacteria 2602042047 2603645313 866
115 iso_pu_bacteria 2602042066 2603698858 866
116 iso_pu_bacteria 2602042067 2603702502 866
117 iso_pu_bacteria 2667528172 2671101669 866
118 iso_pu_bacteria 2681812866 2681998349 866
119 iso_pu_bacteria 2681812869 2682005893 866
120 iso_pu_bacteria 2751185917 2753856427 866
121 iso_pu_bacteria 2765235842 2765589464 866
122 iso_pu_bacteria 2775506706 2775539467 866
123 iso_pu_bacteria 2821118458 2821121852 866
124 iso_pu_bacteria 2823373977 2823375187 866
125 iso_pu_bacteria 2844425489 2844427900 866
126 iso_pu_bacteria 2923634449 2923635350 866
127 iso_pu_bacteria 2927833300 2927833684 866
128 iso_pu_bacteria 2937539931 2937541260 866
129 iso_pu_bacteria 2974310843 2974311609 866
130 iso_pu_bacteria 3000376612 3000377669 866
131 iso_pu_bacteria 8018221730 8018222875 866
132 iso_pu_bacteria 8018405270 8018409817 866
133 3300046794 Ga0495589_0000187 Ga0495589_0000187_45003_47666 867
134 iso_pu_bacteria 2547132181 2547695642 867
135 iso_pu_bacteria 2791355010 2792310647 867
136 iso_pu_bacteria 2935625433 2935626302 867
137 iso_pu_bacteria 2939617950 2939618004 867
138 iso_pu_bacteria 2974435778 2974438778 867
139 iso_pu_bacteria 8019504834 8019505659 867
140 3300046458 Ga0495591_002114 Ga0495591_002114_343_2955 869
141 3300046471 Ga0495650_0000088 Ga0495650_0000088_1713_4325 869
142 3300046507 Ga0495606_0000217 Ga0495606_0000217_49887_52499 869
143 3300046530 Ga0495654_0000395 Ga0495654_0000395_8960_11572 869
144 3300046692 Ga0495671_0005593 Ga0495671_0005593_2504_5116 869
145 3300046694 Ga0495649_0006333 Ga0495649_0006333_3148_5760 869
146 3300046794 Ga0495589_0003907 Ga0495589_0003907_3761_6373 869
147 3300046810 Ga0495660_0000034 Ga0495660_0000034_177993_180605 869
148 3300047320 Ga0495672_0000047 Ga0495672_0000047_230726_233338 869
149 3300047469 Ga0495673_0000162 Ga0495673_0000162_93801_96413 869
150 3300049460 Ga0495682_0000003 Ga0495682_0000003_295688_298300 869
151 3300053126 Ga0500621_000008 Ga0500621_000008_169504_172116 869
152 3300003856 Ga0058692_1002491 Ga0058692_10024911 870
153 3300005289 Ga0065704_10000283 Ga0065704_1000028347 870
154 3300005548 Ga0070665_100002103 Ga0070665_1000021038 870
155 3300006946 Ga0079104_1000039 Ga0079104_100003957 870
156 3300006946 Ga0079104_1001273 Ga0079104_10012731 870
157 3300006946 Ga0079104_1005356 Ga0079104_10053561 870
158 3300009011 Ga0105251_10010074 Ga0105251_100100743 870
159 3300009036 Ga0105244_10009468 Ga0105244_100094683 870
160 3300013104 Ga0157370_10016914 Ga0157370_100169142 870
161 3300015679 Ga0183366_1001 Ga0183366_10011873 870
162 3300015680 Ga0183370_1001 Ga0183370_10011873 870
163 3300015685 Ga0183369_1001 Ga0183369_10011873 870
164 3300015687 Ga0183368_1001 Ga0183368_10011873 870
165 3300026116 Ga0207674_10001989 Ga0207674_1000198921 870
166 3300027111 Ga0209281_1000133 Ga0209281_100013358 870
167 3300027111 Ga0209281_1000345 Ga0209281_100034557 870
168 3300027111 Ga0209281_1000444 Ga0209281_100044445 870
169 3300027111 Ga0209281_1002848 Ga0209281_10028485 870
170 3300027312 Ga0209371_1000001 Ga0209371_10000011862 870
171 3300027312 Ga0209371_1000595 Ga0209371_100059515 870
172 3300027312 Ga0209371_1001031 Ga0209371_100103115 870
173 3300027312 Ga0209371_1003178 Ga0209371_10031782 870
174 3300027312 Ga0209371_1007079 Ga0209371_10070791 870
175 3300028379 Ga0268266_10000869 Ga0268266_1000086919 870
176 3300030500 Ga0268256_1000001 Ga0268256_1000001779 870
177 3300030500 Ga0268256_1007233 Ga0268256_10072333 870
178 3300042010 Ga0439452_000025 Ga0439452_000025_69029_71710 870
179 3300044669 Ga0466981_0000012 Ga0466981_0000012_54554_57181 870
180 3300046471 Ga0495650_0000139 Ga0495650_0000139_116702_119317 870
181 3300048907 Ga0496104_0001541 Ga0496104_0001541_2595_5222 870
182 3300048916 Ga0496113_0028393 Ga0496113_0028393_1192_3819 870
183 3300048919 Ga0496116_0001210 Ga0496116_0001210_9956_12571 870
184 3300048919 Ga0496116_0008346 Ga0496116_0008346_787_3414 870
185 3300048920 Ga0496117_0002106 Ga0496117_0002106_11294_13909 870
186 3300048921 Ga0496118_0002566 Ga0496118_0002566_9383_11998 870
187 3300048921 Ga0496118_0011450 Ga0496118_0011450_1415_4042 870
188 3300048922 Ga0496119_0000391 Ga0496119_0000391_26491_29103 870
189 3300048923 Ga0496120_0000317 Ga0496120_0000317_50558_53170 870
190 3300048923 Ga0496120_0000507 Ga0496120_0000507_41792_44419 870
191 3300048923 Ga0496120_0002874 Ga0496120_0002874_4188_6803 870
192 3300048923 Ga0496120_0003802 Ga0496120_0003802_4492_7107 870
193 3300048923 Ga0496120_0006818 Ga0496120_0006818_3005_5620 870
194 3300048924 Ga0496121_0000617 Ga0496121_0000617_17611_20238 870
195 3300048924 Ga0496121_0008254 Ga0496121_0008254_1826_4453 870
196 3300048924 Ga0496121_0010318 Ga0496121_0010318_3482_6163 870
197 3300048925 Ga0496122_0003982 Ga0496122_0003982_10601_13228 870
198 3300048925 Ga0496122_0004774 Ga0496122_0004774_4378_6993 870
199 3300048926 Ga0496123_0002357 Ga0496123_0002357_15446_18073 870
200 3300048926 Ga0496123_0006569 Ga0496123_0006569_648_3263 870
201 3300048927 Ga0496124_0005725 Ga0496124_0005725_7632_10247 870
202 3300048928 Ga0496125_0000562 Ga0496125_0000562_14020_16647 870
203 3300048929 Ga0496126_0000699 Ga0496126_0000699_43180_45807 870
204 3300048929 Ga0496126_0025346 Ga0496126_0025346_2588_5215 870
205 3300006847 Ga0075431_100028942 Ga0075431_1000289422 871
206 3300009036 Ga0105244_10000200 Ga0105244_1000020023 871
207 3300013105 Ga0157369_10011322 Ga0157369_100113224 871
208 3300025728 Ga0207655_1000198 Ga0207655_100019862 871
209 3300041405 Ga0439438_000908 Ga0439438_000908_5553_8228 871
210 3300050491 nmdc:mga00v17_904_c1 nmdc:mga00v17_904_c1_9013_11748 871
211 3300050510 nmdc:mga06r32_15226_c1 nmdc:mga06r32_15226_c1_429_3188 871
212 iso_pu_bacteria 2561511199 2562462307 871
213 iso_pu_bacteria 2791354903 2791923430 872
214 3300009036 Ga0105244_10000079 Ga0105244_1000007955 873
215 3300025728 Ga0207655_1000188 Ga0207655_100018882 873
216 3300028794 Ga0307515_10000085 Ga0307515_10000085175 876
217 iso_pu_bacteria 643348564 643600735 876
218 3300027312 Ga0209371_1001566 Ga0209371_10015662 878
219 3300030500 Ga0268256_1001302 Ga0268256_10013023 878
220 3300041405 Ga0439438_005718 Ga0439438_005718_1247_3976 878
221 3300041407 Ga0439447_007739 Ga0439447_007739_344_3073 878
222 iso_pu_bacteria 2508501071 2508853062 878
223 iso_pu_bacteria 2806310673 2807178936 878
224 iso_pu_bacteria 640753048 640938554 878
225 3300021361 Ga0213872_10002430 Ga0213872_100024306 880
226 3300039447 Ga0436361_0471302 Ga0436361_0471302_3048_5705 880
227 3300005719 Ga0068861_100012687 Ga0068861_1000126873 881
228 3300006844 Ga0075428_100001630 Ga0075428_1000016303 881
229 3300006846 Ga0075430_100000716 Ga0075430_10000071611 881
230 3300050508 nmdc:mga09592_454_c1 nmdc:mga09592_454_c1_13612_16338 881
231 3300050509 nmdc:mga0qj67_8356_c1 nmdc:mga0qj67_8356_c1_3950_6676 881
232 iso_pu_bacteria 2932406140 2932408028 881
233 iso_pu_bacteria 2939577877 2939578485 881
234 3300031649 Ga0307514_10001733 Ga0307514_1000173317 883
235 3300005618 Ga0068864_100030750 Ga0068864_1000307503 884
236 3300007076 Ga0075435_100000235 Ga0075435_10000023519 884
237 3300025297 Ga0209758_1001020 Ga0209758_100102016 884
238 3300050512 nmdc:mga0n895_9182_c1 nmdc:mga0n895_9182_c1_3939_6677 884
239 3300050513 nmdc:mga0rr50_944_c1 nmdc:mga0rr50_944_c1_675_3413 884
240 3300025298 Ga0209050_1000143 Ga0209050_100014379 885
241 3300048919 Ga0496116_0000181 Ga0496116_0000181_105483_108179 885
242 3300048923 Ga0496120_0000038 Ga0496120_0000038_98768_101464 885
243 3300005328 Ga0070676_10018669 Ga0070676_100186692 886
244 3300005459 Ga0068867_100017816 Ga0068867_1000178162 886
245 3300025735 Ga0207713_1000191 Ga0207713_100019121 886
246 3300026118 Ga0207675_100009930 Ga0207675_1000099303 887
247 3300044712 Ga0453684_0010420 Ga0453684_0010420_6630_9305 889
248 3300003323 rootH1_10008217 rootH1_100082172 890
249 3300021361 Ga0213872_10000187 Ga0213872_1000018734 891
250 3300039447 Ga0436361_1024184 Ga0436361_1024184_45997_48672 891
251 3300059421 Ga0590071_000019 Ga0590071_000019_32079_34811 891
252 iso_pu_bacteria 2747842501 2748016296 893
253 3300005262 Ga0065165_1003922 Ga0065165_10039223 896
254 3300025273 Ga0209673_1006251 Ga0209673_10062512 896
255 iso_pu_bacteria 2585428057 2587726612 897
256 iso_pu_bacteria 2585428058 2587733329 897
257 iso_pu_bacteria 2588253510 2588290927 897
258 iso_pu_bacteria 2643221592 2643972132 897
259 iso_pu_bacteria 2643221625 2644142331 897
260 iso_pu_bacteria 2643221648 2644276025 897
261 3300006237 Ga0097621_100004453 Ga0097621_1000044538 898
262 3300006358 Ga0068871_100000960 Ga0068871_10000096013 898
263 3300053156 Ga0500622_0000671 Ga0500622_0000671_19550_22267 901
264 3300028794 Ga0307515_10000705 Ga0307515_1000070544 903
265 3300031616 Ga0307508_10000215 Ga0307508_1000021521 903
266 3300007076 Ga0075435_100049234 Ga0075435_1000492341 904
267 iso_pu_bacteria 2508501125 2509126996 904
268 iso_pu_bacteria 2747842501 2748017705 904
269 iso_pu_bacteria 2808606384 2808969080 904
270 iso_pu_bacteria 2808606390 2809003911 904
271 iso_pu_bacteria 2808606391 2809011188 904
272 3300009176 Ga0105242_10004746 Ga0105242_100047468 905
273 3300025934 Ga0207686_10002114 Ga0207686_100021149 905
274 3300005330 Ga0070690_100004139 Ga0070690_1000041397 907
275 3300005334 Ga0068869_100006362 Ga0068869_1000063627 907
276 3300005340 Ga0070689_100000261 Ga0070689_1000002612 907
277 3300005343 Ga0070687_100000663 Ga0070687_1000006638 907
278 3300005438 Ga0070701_10007144 Ga0070701_100071442 907
279 3300005440 Ga0070705_100000190 Ga0070705_10000019028 907
280 3300005459 Ga0068867_100000854 Ga0068867_10000085416 907
281 3300005546 Ga0070696_100000902 Ga0070696_1000009022 907
282 3300005547 Ga0070693_100000551 Ga0070693_10000055112 907
283 3300005578 Ga0068854_100005542 Ga0068854_1000055427 907
284 3300005615 Ga0070702_100000025 Ga0070702_10000002527 907
285 3300005617 Ga0068859_100001957 Ga0068859_10000195716 907
286 3300005718 Ga0068866_10000192 Ga0068866_1000019212 907
287 3300005719 Ga0068861_100000170 Ga0068861_10000017027 907
288 3300005842 Ga0068858_100001021 Ga0068858_10000102124 907
289 3300005843 Ga0068860_100002018 Ga0068860_10000201817 907
290 3300005844 Ga0068862_100000867 Ga0068862_10000086714 907
291 3300006237 Ga0097621_100004355 Ga0097621_1000043552 907
292 3300006881 Ga0068865_100001129 Ga0068865_1000011297 907
293 3300006931 Ga0097620_100001957 Ga0097620_10000195716 907
294 3300009098 Ga0105245_10001347 Ga0105245_1000134711 907
295 3300009148 Ga0105243_10001047 Ga0105243_1000104714 907
296 3300009176 Ga0105242_10000503 Ga0105242_1000050312 907
297 3300013297 Ga0157378_10000348 Ga0157378_1000034815 907
298 3300025885 Ga0207653_10000577 Ga0207653_100005777 907
299 3300025917 Ga0207660_10050495 Ga0207660_100504952 907
300 3300025918 Ga0207662_10000248 Ga0207662_1000024815 907
301 3300025921 Ga0207652_10010203 Ga0207652_100102032 907
302 3300025936 Ga0207670_10008360 Ga0207670_100083602 907
303 3300025938 Ga0207704_10003588 Ga0207704_100035882 907
304 3300025942 Ga0207689_10000189 Ga0207689_1000018912 907
305 3300026075 Ga0207708_10017743 Ga0207708_100177432 907
306 3300026089 Ga0207648_10000301 Ga0207648_1000030112 907
307 3300026118 Ga0207675_100000161 Ga0207675_10000016139 907
308 3300028381 Ga0268264_10015554 Ga0268264_100155542 907
309 3300035083 Ga0373926_0000254 Ga0373926_0000254_272_3004 907
310 3300035410 Ga0373924_0006620 Ga0373924_0006620_294_3026 907
311 3300045051 Ga0451576_0001542 Ga0451576_0001542_5944_8673 907
312 3300046455 Ga0495603_0003140 Ga0495603_0003140_3656_6388 907
313 3300046472 Ga0495580_0003753 Ga0495580_0003753_1376_4108 907
314 3300046615 Ga0495656_0005166 Ga0495656_0005166_1515_4247 907
315 3300047321 Ga0495676_0021195 Ga0495676_0021195_2448_5180 907
316 3300002705 JGI25156J39149_1000484 JGI25156J39149_10004848 908
317 3300002741 JGI25157J39369_1000018 JGI25157J39369_10000189 908
318 3300003752 Ga0055539_1000409 Ga0055539_100040917 908
319 3300003756 Ga0055533_1000011 Ga0055533_100001148 908
320 3300003761 Ga0055535_1000107 Ga0055535_10001077 908
321 3300003763 Ga0055529_1000111 Ga0055529_100011170 908
322 3300005364 Ga0070673_100013041 Ga0070673_1000130412 908
323 3300006880 Ga0075429_100001594 Ga0075429_1000015945 908
324 3300009147 Ga0114129_10009086 Ga0114129_1000908613 908
325 3300025226 Ga0209674_100003 Ga0209674_100003349 908
326 3300025230 Ga0209563_100010 Ga0209563_10001078 908
327 3300025231 Ga0207427_100392 Ga0207427_10039210 908
328 3300025242 Ga0209258_100267 Ga0209258_1002677 908
329 3300025242 Ga0209258_101147 Ga0209258_1011477 908
330 3300025246 Ga0209646_1000188 Ga0209646_10001888 908
331 3300025250 Ga0209026_1000033 Ga0209026_1000033286 908
332 3300025253 Ga0209677_100068 Ga0209677_10006844 908
333 3300025253 Ga0209677_100159 Ga0209677_10015942 908
334 3300025256 Ga0209759_1000024 Ga0209759_1000024286 908
335 3300025256 Ga0209759_1001433 Ga0209759_10014337 908
336 3300025256 Ga0209759_1001545 Ga0209759_10015454 908
337 3300025272 Ga0209455_1000158 Ga0209455_100015825 908
338 3300025303 Ga0209051_1002211 Ga0209051_100221112 908
339 3300025919 Ga0207657_10013224 Ga0207657_100132245 908
340 3300025960 Ga0207651_10009827 Ga0207651_100098273 908
341 3300026078 Ga0207702_10010579 Ga0207702_100105794 908
342 3300027907 Ga0207428_10002606 Ga0207428_100026065 908
343 3300028666 Ga0265336_10000008 Ga0265336_10000008300 908
344 3300029957 Ga0265324_10000232 Ga0265324_1000023222 908
345 3300031730 Ga0307516_10000517 Ga0307516_1000051721 908
346 3300035691 Ga0373931_0014119 Ga0373931_0014119_542_3274 908
347 3300037466 Ga0395898_0039540 Ga0395898_0039540_836_3592 908
348 3300038443 Ga0395901_0007959 Ga0395901_0007959_5335_8091 908
349 3300042876 Ga0451577_0011713 Ga0451577_0011713_5348_8086 908
350 3300046506 Ga0495583_0000558 Ga0495583_0000558_11714_14440 908
351 3300050507 nmdc:mga05p37_671_c1 nmdc:mga05p37_671_c1_11629_14367 908
352 3300050508 nmdc:mga09592_3045_c1 nmdc:mga09592_3045_c1_5593_8331 908
353 3300050511 nmdc:mga08y16_7746_c1 nmdc:mga08y16_7746_c1_6327_9065 908

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07724

AAA_2

AAA domain (Cdc48 subfamily)

650

818

0.98

PF10431

ClpB_D2-small

C-terminal, D2-small domain, of ClpB protein

823

906

0.93

PF17871

AAA_lid_9

AAA lid domain

375

481

0.93

PF07728

AAA_5

AAA domain (dynein-related subfamily)

654

784

0.8

PF00004

AAA

ATPase family associated with various cellular activities (AAA)

655

784

0.78

PF00158

Sigma54_activat

Sigma-54 interaction domain

624

788

0.78

PF00004

AAA

ATPase family associated with various cellular activities (AAA)

235

371

0.76

PF13191

AAA_16

AAA ATPase domain

212

340

0.7

Structural Annotation

Top 5 Hits

ID Description Score Start End
4uqw-assembly1.cif.gz_A coevolution of the atpase clpv, the tssb-tssc sheath and the accessory hsie protein distinguishes two type vi secretion classes 0.9614 1 159
4uqw-assembly2.cif.gz_B coevolution of the atpase clpv, the tssb-tssc sheath and the accessory hsie protein distinguishes two type vi secretion classes 0.9604 1 159
4uqw-assembly2.cif.gz_B coevolution of the atpase clpv, the tssb-tssc sheath and the accessory hsie protein distinguishes two type vi secretion classes 0.9485 1 159
4uqw-assembly1.cif.gz_A coevolution of the atpase clpv, the tssb-tssc sheath and the accessory hsie protein distinguishes two type vi secretion classes 0.9383 1 159
1jbk-assembly1.cif.gz_A crystal structure of the first nucelotide binding domain of clpb 0.936 192 381
ID Description Score Start End Superfamily
af_P0ABH9_351_438_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9855 376 434 1.10.8.60
1r6bX03 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9736 376 435 1.10.8.60
1ksfX03 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9711 376 435 1.10.8.60
4uqwB00 Mainly Alpha;Orthogonal Bundle;Double Clp-N motif;Clp, N-terminal domain 0.9604 1 159 1.10.1780.10
af_P9WPD1_147_343_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.957 190 374 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A1X7MKJ3-F1-model_v4 deleted 0.9767 1 132
AF-A0A435GN22-F1-model_v4 AAA family ATPase 0.9698 225 404 GO:0005524
GO:0005737
GO:0016887
GO:0034605
AF-D0X0J6-F1-model_v4 deleted 0.9636 592 907
AF-A0A380B8J5-F1-model_v4 Type VI secretion ATPase, ClpV1 family 0.9627 1 168
AF-A0A1X7MKJ3-F1-model_v4 deleted 0.9623 1 132

Feature Viewer

pLDDT pTM Quality
82.15 0.6 Medium
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Predicted Structure (AlphaFold2)

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