F419145

General Info

Members Datasets Scaffolds Average Seq Length
352 226 704 316

Family's Representative Sequence

Representative Sequence 3300046664|Ga0495659_0046879|Ga0495659_0046879_57_1151
Length 364
Sequence VSADDQNGANDPLRTLRKPHATCSISEETPPSAVTPSDAQSPLVSHSREPNMHYVNDAEVTRALTFPMLISALEEAHRRPKIEVLDGYLGSEKEQYVIRSAVDRGRYMASKMFTSFPANLAGGKMPAVQAVCMLFDGSNGRPLAVMDGTEITHWRTAADSALGAKFLAPPNPETILVVGAGGMSRWLVRAHRAVRPSLQRVLIWNRSMERASDLAKRLAQEGIDAETMTDLDAATRVADVITTCTRSHEPLIKGANLRPGVHLDLVGGYTPQTREADDEAARRALVFVDRRESAFDGVGDILQPIASGAIKETDVLGDLYDLAGGTLEGRRSSADITYFKNAGGGHLDLMTCEVVFRQLGAKLT

Samples

Sample ID Description Type Environment
1 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
4 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
5 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
11 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
12 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
13 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
14 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
15 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
18 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
19 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
20 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
21 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
22 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
23 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
24 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
25 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
28 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
29 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
30 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
31 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300006943 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW Metagenome Nodule
33 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
34 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
37 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
38 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
39 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
40 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
41 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
42 3300021324 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS4 Metagenome Nodule
43 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
44 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
45 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
47 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
48 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
49 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
50 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
51 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
52 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300027357 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) Metagenome Nodule
59 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
60 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
61 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
63 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
64 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
67 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
68 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
69 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
70 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
71 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
72 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
73 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
74 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
75 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
76 3300033442 Root nodule microbial communities collected in Santa Monica, California, United States - Edamame nodules 1 Metagenome Nodule
77 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
78 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
79 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
80 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
81 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
82 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
83 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
84 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
85 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
86 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
87 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
88 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
89 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
90 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
91 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
92 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
93 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
94 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
95 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
96 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
97 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
98 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
99 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
100 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
101 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
102 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
103 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
104 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
105 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
106 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
107 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
108 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
124 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
125 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
126 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
127 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
128 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
129 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
130 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
131 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
132 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
133 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
134 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
135 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
136 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
137 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
138 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
141 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
142 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
143 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
144 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
145 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
146 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
147 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
148 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
149 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
150 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
151 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
152 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
153 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
154 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
155 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
156 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
157 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
158 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
159 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
160 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
161 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
162 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
163 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
164 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
165 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
166 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
167 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
168 3300053737 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 endosphere Metagenome Endosphere
169 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
170 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
171 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
172 2513237092 Bradyrhizobium sp. WSM1743 Isolate Nodule
173 2513237096 Bradyrhizobium pachyrhizi USDA 3259 Isolate Nodule
174 2513237102 Bradyrhizobium japonicum USDA 135 Isolate Nodule
175 2513237137 Bradyrhizobium elkanii USDA 94 Isolate Nodule
176 2513237145 Bradyrhizobium elkanii USDA 3254 Isolate Nodule
177 2517093001 Bradyrhizobium japonicum USDA 124 Isolate Nodule
178 2517572143 Bradyrhizobium elkanii USDA 76 Isolate Nodule
179 2524023228 Bradyrhizobium sp. Th.b2 Isolate Nodule
180 2617270741 Bradyrhizobium yuanmingense CCBAU 10071 Isolate Nodule
181 2667528175 Rhizobium tropici NFR14 Isolate Rhizoplane
182 2728368998 Bradyrhizobium macuxiense BR 10303 Isolate Nodule
183 2791355197 Bradyrhizobium sp. C9 Isolate Nodule
184 2821443989 Inquilinus ginsengisoli 584 Isolate Unclassified
185 2824600985 Bradyrhizobium sp.HAMBI 2135 Isolate Unclassified
186 2824609381 Bradyrhizobium sp. HAMBI 2134 Isolate Unclassified
187 2824617872 Bradyrhizobium sp. HAMBI 2133 Isolate Unclassified
188 2824626560 Bradyrhizobium sp. HAMBI 2149 Isolate Unclassified
189 2824635225 Bradyrhizobium sp. HAMBI 2136 Isolate Unclassified
190 2824644064 Bradyrhizobium sp. HAMBI 2137 Isolate Unclassified
191 2824653114 Bradyrhizobium sp. HAMBI 2142 Isolate Unclassified
192 2824714736 Bradyrhizobium sp. HAMBI 2151 Isolate Unclassified
193 2824723954 Bradyrhizobium sp. HAMBI 2152 Isolate Unclassified
194 2824732956 Bradyrhizobium sp. HAMBI 2153 Isolate Unclassified
195 2824746037 Bradyrhizobium sp. HAMBI 2299 Isolate Unclassified
196 2841957949 Bradyrhizobium sp. CIR1 Isolate Nodule
197 2844533157 Inquilinus sp. R-72501 v. 2 Isolate Unclassified
198 2857509624 Bradyrhizobium sp. R-73088 Isolate Unclassified
199 2874612657 Bradyrhizobium forestalis INPA54B Isolate Nodule
200 2874628541 Bradyrhizobium betae Opo-243 Isolate Unclassified
201 2881364244 Bradyrhizobium sp. RP6 Isolate Unclassified
202 2885374607 Bradyrhizobium sp. NAS96.2 Isolate Unclassified
203 2885409591 Bradyrhizobium sp. NAS80.1 Isolate Unclassified
204 2888388044 Bradyrhizobium cosmicum 58S1 Isolate Unclassified
205 2888419890 Bradyrhizobium sp. 1(2017) 63S1MB Isolate Unclassified
206 2904699407
207 2906610324
208 2906635258 Bradyrhizobium sp. USDA 3458 Isolate Unclassified
209 2906660503 Bradyrhizobium brasilense UFLA 03-321 Isolate Unclassified
210 2908739725 Bradyrhizobium sp. UFLA03-84 Isolate Nodule
211 2908756301 Bradyrhizobium ivorense CI-41S Isolate Nodule
212 2908775508 Bradyrhizobium sp. SUTN9-2 Isolate Unclassified
213 2922425934
214 2929615660 Bradyrhizobium japonicum TXVA Isolate Nodule
215 2929624759 Bradyrhizobium japonicum TXEA Isolate Nodule
216 2933577622 Bradyrhizobium japonicum SEMIA 417 Isolate Nodule
217 2935630451 Bradyrhizobium sp. I1.14.4 Isolate Nodule
218 2941507105 Bradyrhizobium sp. i1.12.3 Isolate Nodule
219 2941515067 Bradyrhizobium sp. i1.14.1 Isolate Nodule
220 2941523033 Bradyrhizobium sp. i1.8.4 Isolate Nodule
221 3005474847 Bradyrhizobium sp. CCBAU 53421 Isolate Nodule
222 8006933436 Bradyrhizobium septentrionale 7(2017) Isolate Unclassified
223 8006973647 Bradyrhizobium septentrionale 162S2 Isolate Nodule
224 8019555841 Bradyrhizobium sp. JR6.1 Isolate Nodule
225 8019565922 Bradyrhizobium sp. JR3.5 Isolate Nodule
226 8055742211 Bradyrhizobium japonicum 5038 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 85.1
Metatranscriptomes 0
Isolates 14.9

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.93
Nodule 10.23
Rhizoplane 5.68
Rhizosphere 60.23
Stem 0
Stem Tuber 0
Unclassified 2.27

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495659_0046879 3300046664 Bacteria 1561
2 JGI25151J46595_10000760 3300003187 Bacteria 26137
3 JGI25160J50197_1035693 3300003354 Bacteria 1216
4 JGI25405J52794_10028156 3300003911 Bacteria 1159
5 Ga0065165_1001402 3300005262 Bacteria 26305
6 Ga0070670_100198271 3300005331 Bacteria 1744
7 Ga0070689_100409787 3300005340 Unclassified 1147
8 Ga0070675_100317369 3300005354 Bacteria 1376
9 Ga0070671_100031885 3300005355 Bacteria 4356
10 Ga0070674_100007421 3300005356 Bacteria 6468
11 Ga0070663_100337828 3300005455 Bacteria 1216
12 Ga0070678_100199427 3300005456 Bacteria 1651
13 Ga0068867_100138582 3300005459 Bacteria 1899
14 Ga0070706_100139685 3300005467 Bacteria 2261
15 Ga0070672_100296895 3300005543 Bacteria 1369
16 Ga0070665_100101537 3300005548 Bacteria 2880
17 Ga0068859_100449831 3300005617 Bacteria 1384
18 Ga0081455_10000306 3300005937 Bacteria 64656
19 Ga0081455_10036844 3300005937 Bacteria 4349
20 Ga0075365_10066548 3300006038 Bacteria 2418
21 Ga0075368_10004150 3300006042 Bacteria 4881
22 Ga0075368_10012972 3300006042 Bacteria 3056
23 Ga0075363_100002777 3300006048 Bacteria 7265
24 Ga0075363_100022260 3300006048 Bacteria 3203
25 Ga0075369_10048036 3300006186 Bacteria 1841
26 Ga0075370_10163994 3300006353 Bacteria 1305
27 Ga0075428_100015216 3300006844 Bacteria 8534
28 Ga0075430_100036889 3300006846 Bacteria 4143
29 Ga0075431_100000965 3300006847 Bacteria 25537
30 Ga0075433_10004354 3300006852 Bacteria 11004
31 Ga0075434_100002095 3300006871 Bacteria 17343
32 Ga0075434_100069150 3300006871 Bacteria 3520
33 Ga0075429_100031426 3300006880 Bacteria 4614
34 Ga0075436_100047672 3300006914 Bacteria 2955
35 Ga0097620_100449881 3300006931 Bacteria 1384
36 Ga0099822_1000676 3300006943 Bacteria 34395
37 Ga0075435_100006279 3300007076 Bacteria 8390
38 Ga0075435_100161122 3300007076 Bacteria 1890
39 Ga0111539_10002318 3300009094 Bacteria 25335
40 Ga0111539_10201703 3300009094 Unclassified 2319
41 Ga0111539_10431162 3300009094 Bacteria 1535
42 Ga0114129_10000124 3300009147 Bacteria 77871
43 Ga0114129_10069773 3300009147 Bacteria 4899
44 Ga0105237_10135686 3300009545 Bacteria 2455
45 Ga0105238_10563136 3300009551 Bacteria 1145
46 Ga0105239_10098601 3300010375 Bacteria 3230
47 Ga0105239_10342760 3300010375 Bacteria 1687
48 Ga0163163_10178984 3300014325 Bacteria 2167
49 Ga0214544_1000004 3300021320 Bacteria 455869
50 Ga0214542_1000001 3300021321 Bacteria 1018696
51 Ga0214545_1000001 3300021324 Bacteria 1092817
52 Ga0214543_1000006 3300021327 Bacteria 443395
53 Ga0213875_10045363 3300021388 Bacteria 2063
54 Ga0213875_10130955 3300021388 Bacteria 1173
55 Ga0209563_101959 3300025230 Bacteria 4967
56 Ga0209233_1006216 3300025261 Bacteria 3870
57 Ga0209130_1000791 3300025284 Bacteria 27138
58 Ga0209025_1000263 3300025294 Bacteria 123578
59 Ga0209564_1005322 3300025295 Bacteria 7409
60 Ga0209758_1003721 3300025297 Bacteria 13522
61 Ga0209758_1005149 3300025297 Bacteria 10297
62 Ga0207426_1000141 3300025302 Bacteria 194453
63 Ga0207426_1000400 3300025302 Bacteria 73493
64 Ga0207426_1000402 3300025302 Bacteria 72738
65 Ga0207684_10126362 3300025910 Bacteria 2194
66 Ga0207684_10312642 3300025910 Bacteria 1354
67 Ga0207650_10179035 3300025925 Bacteria 1689
68 Ga0207644_10043448 3300025931 Bacteria 3189
69 Ga0207669_10272764 3300025937 Unclassified 1271
70 Ga0207668_10350851 3300025972 Bacteria 1234
71 Ga0207683_10040135 3300026121 Bacteria 4083
72 Ga0209589_1000009 3300027357 Bacteria 252104
73 Ga0209489_100010 3300027361 Bacteria 252139
74 Ga0209700_100017 3300027363 Bacteria 252104
75 Ga0209588_1010219 3300027671 Bacteria 2818
76 Ga0209813_10000756 3300027866 Bacteria 7389
77 Ga0207428_10011674 3300027907 Bacteria 7747
78 Ga0207428_10020633 3300027907 Bacteria 5592
79 Ga0268266_10186148 3300028379 Bacteria 1893
80 Ga0268265_10223793 3300028380 Bacteria 1648
81 Ga0265338_10168418 3300028800 Bacteria 1683
82 Ga0307405_10069407 3300031731 Bacteria 2259
83 Ga0307410_10038165 3300031852 Bacteria 3144
84 Ga0307406_10113848 3300031901 Bacteria 1867
85 Ga0307407_10022190 3300031903 Bacteria 3289
86 Ga0307412_10033199 3300031911 Bacteria 3278
87 Ga0307416_100477427 3300032002 Bacteria 1306
88 Ga0307414_10169693 3300032004 Bacteria 1743
89 Ga0307414_10317810 3300032004 Bacteria 1324
90 Ga0307411_10010741 3300032005 Bacteria 4899
91 Ga0307510_10031771 3300033180 Bacteria 5956
92 Ga0307510_10051621 3300033180 Bacteria 4347
93 Ga0315911_1000009 3300033442 Bacteria 379354
94 Ga0373950_0016480 3300034818 Bacteria 1264
95 Ga0373960_0007295 3300035121 Bacteria 2617
96 Ga0373935_0201554 3300035692 Bacteria 1375
97 Ga0395900_0053746 3300037418 Bacteria 4146
98 Ga0395898_0032455 3300037466 Bacteria 5212
99 Ga0395898_0068996 3300037466 Bacteria 3421
100 Ga0395905_0002238 3300037471 Bacteria 21782
101 Ga0436364_0549234 3300037853 Bacteria 1196
102 Ga0436364_0652544 3300037853 Bacteria 11793
103 Ga0395901_0088747 3300038443 Bacteria 3234
104 Ga0395901_0622052 3300038443 Bacteria 1086
105 Ga0436361_1142803 3300039447 Bacteria 1132
106 Ga0439431_0023043 3300041997 Bacteria 1505
107 Ga0495638_0003239 3300046460 Bacteria 12873
108 Ga0495638_0007648 3300046460 Bacteria 7725
109 Ga0495610_0026366 3300046512 Bacteria 3104
110 Ga0495610_0045909 3300046512 Bacteria 2159
111 Ga0495648_0093127 3300046524 Bacteria 1681
112 Ga0495581_0050532 3300047315 Bacteria 2401
113 Ga0496101_0138780 3300048904 Bacteria 1851
114 Ga0496104_0001376 3300048907 Bacteria 21033
115 Ga0496104_0003975 3300048907 Bacteria 12800
116 Ga0496104_0004529 3300048907 Bacteria 12111
117 Ga0496105_0009910 3300048908 Bacteria 7472
118 Ga0496105_0011192 3300048908 Bacteria 7078
119 Ga0496105_0014695 3300048908 Bacteria 6232
120 Ga0496106_0205606 3300048909 Bacteria 1568
121 Ga0496108_0001475 3300048911 Bacteria 18572
122 Ga0496108_0043910 3300048911 Bacteria 3733
123 Ga0496109_0001571 3300048912 Bacteria 19043
124 Ga0496109_0008448 3300048912 Bacteria 8755
125 Ga0496109_0124691 3300048912 Bacteria 2401
126 Ga0496110_0005849 3300048913 Bacteria 9668
127 Ga0496111_0138063 3300048914 Bacteria 1806
128 Ga0496111_0180808 3300048914 Bacteria 1567
129 Ga0496112_0062279 3300048915 Bacteria 3679
130 Ga0496113_0005395 3300048916 Bacteria 7970
131 Ga0496115_0133277 3300048918 Bacteria 2048
132 Ga0496116_0084683 3300048919 Bacteria 1952
133 Ga0496118_0026513 3300048921 Bacteria 4934
134 Ga0496120_0036260 3300048923 Bacteria 2937
135 Ga0496121_0089663 3300048924 Bacteria 2406
136 Ga0496121_0174261 3300048924 Bacteria 1559
137 Ga0496121_0211122 3300048924 Bacteria 1375
138 Ga0496125_0056432 3300048928 Bacteria 3189
139 Ga0496126_0230282 3300048929 Bacteria 1553
140 Ga0496126_0251841 3300048929 Bacteria 1471
141 Ga0501031_0016704 3300049568 Bacteria 4768
142 Ga0501031_0102626 3300049568 Bacteria 1866
143 Ga0501032_0060205 3300049569 Bacteria 2546
144 Ga0501032_0127344 3300049569 Bacteria 1681
145 Ga0501032_0199081 3300049569 Bacteria 1307
146 Ga0501033_0070219 3300049570 Bacteria 2573
147 Ga0501033_0140972 3300049570 Bacteria 1742
148 Ga0501033_0219074 3300049570 Bacteria 1355
149 Ga0501034_0001164 3300049571 Bacteria 36430
150 Ga0501034_0003034 3300049571 Bacteria 19413
151 Ga0501034_0135079 3300049571 Bacteria 2447
152 Ga0501034_0153661 3300049571 Bacteria 2276
153 Ga0501034_0334072 3300049571 Bacteria 1446
154 Ga0501036_0000612 3300049572 Bacteria 25923
155 Ga0501036_0010791 3300049572 Bacteria 7550
156 Ga0501036_0079100 3300049572 Bacteria 2781
157 Ga0501036_0166250 3300049572 Bacteria 1859
158 Ga0501036_0314422 3300049572 Bacteria 1309
159 Ga0501036_0374055 3300049572 Bacteria 1189
160 Ga0501037_0009073 3300049573 Bacteria 7289
161 Ga0501037_0034639 3300049573 Bacteria 3725
162 Ga0501037_0086875 3300049573 Bacteria 2263
163 Ga0501038_0011355 3300049574 Bacteria 8129
164 Ga0501038_0063376 3300049574 Bacteria 3155
165 Ga0501038_0132720 3300049574 Bacteria 2043
166 Ga0501038_0141583 3300049574 Bacteria 1967
167 Ga0501039_0003897 3300049575 Bacteria 11205
168 Ga0501039_0033251 3300049575 Bacteria 3977
169 Ga0501039_0038984 3300049575 Unclassified 3670
170 Ga0501039_0119085 3300049575 Bacteria 2068
171 Ga0501040_0003299 3300049576 Bacteria 10431
172 Ga0501040_0097540 3300049576 Unclassified 2048
173 Ga0501041_0091586 3300049577 Bacteria 1877
174 Ga0501042_0002578 3300049578 Bacteria 11146
175 Ga0501042_0169463 3300049578 Bacteria 1576
176 Ga0501043_0015105 3300049579 Bacteria 6043
177 Ga0501043_0017931 3300049579 Bacteria 5551
178 Ga0501043_0047296 3300049579 Bacteria 3382
179 Ga0501043_0059627 3300049579 Bacteria 2995
180 Ga0501043_0062687 3300049579 Bacteria 2919
181 Ga0501043_0096011 3300049579 Bacteria 2330
182 Ga0501043_0125546 3300049579 Bacteria 2012
183 Ga0501046_0032754 3300049580 Bacteria 4206
184 Ga0501046_0140034 3300049580 Bacteria 1831
185 Ga0501047_0000459 3300049581 Bacteria 44977
186 Ga0501047_0094280 3300049581 Bacteria 2872
187 Ga0501047_0112662 3300049581 Bacteria 2602
188 Ga0501048_0002910 3300049582 Bacteria 13070
189 Ga0501048_0009956 3300049582 Bacteria 7118
190 Ga0501048_0016698 3300049582 Bacteria 5411
191 Ga0501048_0039180 3300049582 Bacteria 3400
192 Ga0501067_0088143 3300049583 Bacteria 1722
193 Ga0501068_0021465 3300049584 Bacteria 3770
194 Ga0501068_0032268 3300049584 Bacteria 3114
195 Ga0501068_0175307 3300049584 Bacteria 1354
196 Ga0501069_0009390 3300049585 Bacteria 5163
197 Ga0501069_0018856 3300049585 Bacteria 3724
198 Ga0501070_0003584 3300049586 Bacteria 13417
199 Ga0501070_0026758 3300049586 Bacteria 4838
200 Ga0501070_0180264 3300049586 Bacteria 1738
201 Ga0501070_0201561 3300049586 Bacteria 1634
202 Ga0501070_0248282 3300049586 Bacteria 1456
203 Ga0501070_0267186 3300049586 Bacteria 1397
204 Ga0501070_0323185 3300049586 Unclassified 1255
205 Ga0501071_0000244 3300049587 Bacteria 25138
206 Ga0501071_0031522 3300049587 Bacteria 3758
207 Ga0501071_0063091 3300049587 Bacteria 2686
208 Ga0501072_0002603 3300049588 Bacteria 13517
209 Ga0501073_0046746 3300049589 Bacteria 3043
210 Ga0501073_0080718 3300049589 Bacteria 2262
211 Ga0501074_0033603 3300049590 Bacteria 3717
212 Ga0501074_0145750 3300049590 Bacteria 1693
213 Ga0501074_0207077 3300049590 Bacteria 1397
214 Ga0501075_0004621 3300049591 Bacteria 9342
215 Ga0501075_0084528 3300049591 Bacteria 2404
216 Ga0501075_0152365 3300049591 Bacteria 1762
217 Ga0501076_0001068 3300049592 Bacteria 17988
218 Ga0501076_0032948 3300049592 Bacteria 4046
219 Ga0501077_0001148 3300049593 Bacteria 16004
220 Ga0501079_0018054 3300049741 Bacteria 5388
221 Ga0501079_0057337 3300049741 Bacteria 3005
222 Ga0501079_0078323 3300049741 Bacteria 2556
223 Ga0501079_0201942 3300049741 Bacteria 1553
224 Ga0501079_0217175 3300049741 Bacteria 1494
225 Ga0501080_0000417 3300049742 Bacteria 32655
226 Ga0501080_0003304 3300049742 Bacteria 14254
227 Ga0501080_0021302 3300049742 Bacteria 6000
228 Ga0501080_0032102 3300049742 Bacteria 4896
229 Ga0501080_0156937 3300049742 Bacteria 2101
230 Ga0501081_0002460 3300049743 Bacteria 11684
231 Ga0501081_0018841 3300049743 Bacteria 4585
232 Ga0501083_0004937 3300049744 Bacteria 9442
233 Ga0501083_0037694 3300049744 Bacteria 3291
234 Ga0501083_0051073 3300049744 Bacteria 2781
235 Ga0501083_0064734 3300049744 Bacteria 2436
236 Ga0501083_0069022 3300049744 Bacteria 2352
237 Ga0501083_0121016 3300049744 Bacteria 1717
238 Ga0501035_0042657 3300049822 Bacteria 4091
239 Ga0501035_0047684 3300049822 Bacteria 3844
240 Ga0501035_0057445 3300049822 Bacteria 3469
241 Ga0501035_0058091 3300049822 Bacteria 3448
242 Ga0501044_0001239 3300049823 Bacteria 30325
243 Ga0501044_0018840 3300049823 Bacteria 7391
244 Ga0501044_0042774 3300049823 Bacteria 4710
245 Ga0501044_0044581 3300049823 Bacteria 4601
246 Ga0501044_0154887 3300049823 Bacteria 2271
247 Ga0501044_0194473 3300049823 Bacteria 1989
248 Ga0501044_0252368 3300049823 Bacteria 1704
249 Ga0501045_0001177 3300049824 Bacteria 17367
250 Ga0501045_0081974 3300049824 Bacteria 2379
251 Ga0501045_0180503 3300049824 Bacteria 1573
252 nmdc:mga03n38_5707_c1 3300050490 Bacteria 4264
253 nmdc:mga0yw44_40017_c1 3300050492 Bacteria 2782
254 nmdc:mga04h51_223_c1 3300050495 Bacteria 15123
255 nmdc:mga05p37_274_c1 3300050507 Bacteria 53645
256 nmdc:mga05p37_337132_c1 3300050507 Bacteria 1779
257 nmdc:mga05p37_63650_c1 3300050507 Bacteria 4539
258 nmdc:mga09592_28494_c1 3300050508 Bacteria 4640
259 nmdc:mga06r32_1692_c1 3300050510 Bacteria 19862
260 nmdc:mga06r32_588997_c1 3300050510 Unclassified 1084
261 nmdc:mga08y16_204_c1 3300050511 Bacteria 42613
262 nmdc:mga08y16_59854_c1 3300050511 Bacteria 3978
263 nmdc:mga0n895_3158_c1 3300050512 Bacteria 13161
264 nmdc:mga0n895_51293_c1 3300050512 Bacteria 4047
265 nmdc:mga0rr50_30727_c1 3300050513 Bacteria 3807
266 nmdc:mga0rr50_751_c1 3300050513 Bacteria 17465
267 nmdc:mga0rr50_81814_c1 3300050513 Bacteria 2493
268 nmdc:mga08x19_35919_c1 3300050514 Bacteria 3137
269 nmdc:mga0a205_84258_c1 3300050515 Bacteria 3071
270 nmdc:mga0a205_8819_c1 3300050515 Bacteria 9185
271 nmdc:mga0sz30_43635_c1 3300050516 Bacteria 1888
272 Ga0500643_000046 3300053087 Bacteria 150388
273 Ga0500566_0000381 3300053094 Bacteria 24461
274 Ga0500641_0053426 3300053096 Bacteria 1668
275 Ga0500555_001255 3300053103 Bacteria 8133
276 Ga0500562_009759 3300053108 Bacteria 2428
277 Ga0500569_009986 3300053109 Bacteria 2221
278 Ga0500595_009177 3300053119 Bacteria 4004
279 Ga0500608_084318 3300053122 Bacteria 1495
280 Ga0500568_0013548 3300053139 Bacteria 3714
281 Ga0500568_0017532 3300053139 Bacteria 3160
282 Ga0500588_0070664 3300053146 Bacteria 1144
283 Ga0500589_046435 3300053147 Bacteria 2023
284 Ga0500616_0000028 3300053153 Bacteria 435722
285 Ga0500620_002173 3300053155 Bacteria 3869
286 Ga0500622_0032062 3300053156 Bacteria 2755
287 Ga0500636_0000796 3300053177 Bacteria 16965
288 Ga0500601_000183 3300053737 Bacteria 12959
289 Ga0501084_0000224 3300054114 Bacteria 42957
290 Ga0501084_0006093 3300054114 Bacteria 9916
291 Ga0501084_0321247 3300054114 Bacteria 1308
292 Ga0501082_0002209 3300060353 Bacteria 17017
293 Ga0501082_0093574 3300060353 Bacteria 2597
294 Ga0501082_0405819 3300060353 Bacteria 1189
295 Ga0530510_0002646 3300061734 Bacteria 12307
296 Ga0530510_0024011 3300061734 Bacteria 4349
297 Ga0530510_0256431 3300061734 Unclassified 1304
298 2513622486 2513237092 Bacteria 8341956
299 2513659324 2513237096 Bacteria 8722461
300 2513700102 2513237102 Bacteria 7703324
301 2513861756 2513237137 Bacteria 9558895
302 2513921414 2513237145 Bacteria 8979722
303 2517103892 2517093001 Bacteria 9002274
304 2517893732 2517572143 Bacteria 9484767
305 2524535868 2524023228 Bacteria 10118060
306 2617372463 2617270741 Bacteria 8201522
307 2671124227 2667528175 Bacteria 7532676
308 2728752884 2728368998 Bacteria 8720350
309 2793070767 2791355197 Bacteria 8420563
310 2821449541 2821443989 Bacteria 7658172
311 2824607044 2824600985 Bacteria 8488197
312 2824613481 2824609381 Bacteria 8672835
313 2824622900 2824617872 Bacteria 8814715
314 2824631949 2824626560 Bacteria 8813858
315 2824638528 2824635225 Bacteria 8785348
316 2824650683 2824644064 Bacteria 8743947
317 2824658238 2824653114 Bacteria 8493680
318 2824716182 2824714736 Bacteria 8717648
319 2824730763 2824723954 Bacteria 8758240
320 2824738594 2824732956 Bacteria 7810675
321 2824747105 2824746037 Bacteria 7911610
322 2841959954 2841957949 Bacteria 8652217
323 2844534498 2844533157 Bacteria 7517899
324 2857513015 2857509624 Bacteria 7472071
325 2874614826 2874612657 Bacteria 8252029
326 2874635251 2874628541 Bacteria 8630250
327 2881364694 2881364244 Bacteria 7710352
328 2885377714 2885374607 Bacteria 8927485
329 2885409781 2885409591 Bacteria 9235467
330 2888393024 2888388044 Bacteria 7304136
331 2888425358 2888419890 Bacteria 7857137
332 2904701367
333 2906610609
334 2906641929 2906635258 Bacteria 8601019
335 2906666120 2906660503 Bacteria 8595048
336 2908744133 2908739725 Bacteria 8628932
337 2908761686 2908756301 Bacteria 8864324
338 2908780909 2908775508 Bacteria 8092255
339 2922428715
340 2929620491 2929615660 Bacteria 9193770
341 2929626384 2929624759 Bacteria 9339455
342 2933582409 2933577622 Bacteria 9116884
343 2935634687 2935630451 Bacteria 8169952
344 2941509173 2941507105 Bacteria 8166816
345 2941517002 2941515067 Bacteria 8166720
346 2941524903 2941523033 Bacteria 8169134
347 3005478848 3005474847 Bacteria 9259049
348 8006942499 8006933436 Bacteria 10410654
349 8006982224 8006973647 Bacteria 10679141
350 8019558258 8019555841 Bacteria 9642137
351 8019567038 8019565922 Bacteria 9639779
352 8055745353 8055742211 Bacteria 9226248
353 Ga0495659_0046879
354 JGI25151J46595_10000760
355 JGI25160J50197_1035693
356 JGI25405J52794_10028156
357 Ga0065165_1001402
358 Ga0070670_100198271
359 Ga0070689_100409787
360 Ga0070675_100317369
361 Ga0070671_100031885
362 Ga0070674_100007421
363 Ga0070663_100337828
364 Ga0070678_100199427
365 Ga0068867_100138582
366 Ga0070706_100139685
367 Ga0070672_100296895
368 Ga0070665_100101537
369 Ga0068859_100449831
370 Ga0081455_10000306
371 Ga0081455_10036844
372 Ga0075365_10066548
373 Ga0075368_10004150
374 Ga0075368_10012972
375 Ga0075363_100002777
376 Ga0075363_100022260
377 Ga0075369_10048036
378 Ga0075370_10163994
379 Ga0075428_100015216
380 Ga0075430_100036889
381 Ga0075431_100000965
382 Ga0075433_10004354
383 Ga0075434_100002095
384 Ga0075434_100069150
385 Ga0075429_100031426
386 Ga0075436_100047672
387 Ga0097620_100449881
388 Ga0099822_1000676
389 Ga0075435_100006279
390 Ga0075435_100161122
391 Ga0111539_10002318
392 Ga0111539_10201703
393 Ga0111539_10431162
394 Ga0114129_10000124
395 Ga0114129_10069773
396 Ga0105237_10135686
397 Ga0105238_10563136
398 Ga0105239_10098601
399 Ga0105239_10342760
400 Ga0163163_10178984
401 Ga0214544_1000004
402 Ga0214542_1000001
403 Ga0214545_1000001
404 Ga0214543_1000006
405 Ga0213875_10045363
406 Ga0213875_10130955
407 Ga0209563_101959
408 Ga0209233_1006216
409 Ga0209130_1000791
410 Ga0209025_1000263
411 Ga0209564_1005322
412 Ga0209758_1003721
413 Ga0209758_1005149
414 Ga0207426_1000141
415 Ga0207426_1000400
416 Ga0207426_1000402
417 Ga0207684_10126362
418 Ga0207684_10312642
419 Ga0207650_10179035
420 Ga0207644_10043448
421 Ga0207669_10272764
422 Ga0207668_10350851
423 Ga0207683_10040135
424 Ga0209589_1000009
425 Ga0209489_100010
426 Ga0209700_100017
427 Ga0209588_1010219
428 Ga0209813_10000756
429 Ga0207428_10011674
430 Ga0207428_10020633
431 Ga0268266_10186148
432 Ga0268265_10223793
433 Ga0265338_10168418
434 Ga0307405_10069407
435 Ga0307410_10038165
436 Ga0307406_10113848
437 Ga0307407_10022190
438 Ga0307412_10033199
439 Ga0307416_100477427
440 Ga0307414_10169693
441 Ga0307414_10317810
442 Ga0307411_10010741
443 Ga0307510_10031771
444 Ga0307510_10051621
445 Ga0315911_1000009
446 Ga0373950_0016480
447 Ga0373960_0007295
448 Ga0373935_0201554
449 Ga0395900_0053746
450 Ga0395898_0032455
451 Ga0395898_0068996
452 Ga0395905_0002238
453 Ga0436364_0549234
454 Ga0436364_0652544
455 Ga0395901_0088747
456 Ga0395901_0622052
457 Ga0436361_1142803
458 Ga0439431_0023043
459 Ga0495638_0003239
460 Ga0495638_0007648
461 Ga0495610_0026366
462 Ga0495610_0045909
463 Ga0495648_0093127
464 Ga0495581_0050532
465 Ga0496101_0138780
466 Ga0496104_0001376
467 Ga0496104_0003975
468 Ga0496104_0004529
469 Ga0496105_0009910
470 Ga0496105_0011192
471 Ga0496105_0014695
472 Ga0496106_0205606
473 Ga0496108_0001475
474 Ga0496108_0043910
475 Ga0496109_0001571
476 Ga0496109_0008448
477 Ga0496109_0124691
478 Ga0496110_0005849
479 Ga0496111_0138063
480 Ga0496111_0180808
481 Ga0496112_0062279
482 Ga0496113_0005395
483 Ga0496115_0133277
484 Ga0496116_0084683
485 Ga0496118_0026513
486 Ga0496120_0036260
487 Ga0496121_0089663
488 Ga0496121_0174261
489 Ga0496121_0211122
490 Ga0496125_0056432
491 Ga0496126_0230282
492 Ga0496126_0251841
493 Ga0501031_0016704
494 Ga0501031_0102626
495 Ga0501032_0060205
496 Ga0501032_0127344
497 Ga0501032_0199081
498 Ga0501033_0070219
499 Ga0501033_0140972
500 Ga0501033_0219074
501 Ga0501034_0001164
502 Ga0501034_0003034
503 Ga0501034_0135079
504 Ga0501034_0153661
505 Ga0501034_0334072
506 Ga0501036_0000612
507 Ga0501036_0010791
508 Ga0501036_0079100
509 Ga0501036_0166250
510 Ga0501036_0314422
511 Ga0501036_0374055
512 Ga0501037_0009073
513 Ga0501037_0034639
514 Ga0501037_0086875
515 Ga0501038_0011355
516 Ga0501038_0063376
517 Ga0501038_0132720
518 Ga0501038_0141583
519 Ga0501039_0003897
520 Ga0501039_0033251
521 Ga0501039_0038984
522 Ga0501039_0119085
523 Ga0501040_0003299
524 Ga0501040_0097540
525 Ga0501041_0091586
526 Ga0501042_0002578
527 Ga0501042_0169463
528 Ga0501043_0015105
529 Ga0501043_0017931
530 Ga0501043_0047296
531 Ga0501043_0059627
532 Ga0501043_0062687
533 Ga0501043_0096011
534 Ga0501043_0125546
535 Ga0501046_0032754
536 Ga0501046_0140034
537 Ga0501047_0000459
538 Ga0501047_0094280
539 Ga0501047_0112662
540 Ga0501048_0002910
541 Ga0501048_0009956
542 Ga0501048_0016698
543 Ga0501048_0039180
544 Ga0501067_0088143
545 Ga0501068_0021465
546 Ga0501068_0032268
547 Ga0501068_0175307
548 Ga0501069_0009390
549 Ga0501069_0018856
550 Ga0501070_0003584
551 Ga0501070_0026758
552 Ga0501070_0180264
553 Ga0501070_0201561
554 Ga0501070_0248282
555 Ga0501070_0267186
556 Ga0501070_0323185
557 Ga0501071_0000244
558 Ga0501071_0031522
559 Ga0501071_0063091
560 Ga0501072_0002603
561 Ga0501073_0046746
562 Ga0501073_0080718
563 Ga0501074_0033603
564 Ga0501074_0145750
565 Ga0501074_0207077
566 Ga0501075_0004621
567 Ga0501075_0084528
568 Ga0501075_0152365
569 Ga0501076_0001068
570 Ga0501076_0032948
571 Ga0501077_0001148
572 Ga0501079_0018054
573 Ga0501079_0057337
574 Ga0501079_0078323
575 Ga0501079_0201942
576 Ga0501079_0217175
577 Ga0501080_0000417
578 Ga0501080_0003304
579 Ga0501080_0021302
580 Ga0501080_0032102
581 Ga0501080_0156937
582 Ga0501081_0002460
583 Ga0501081_0018841
584 Ga0501083_0004937
585 Ga0501083_0037694
586 Ga0501083_0051073
587 Ga0501083_0064734
588 Ga0501083_0069022
589 Ga0501083_0121016
590 Ga0501035_0042657
591 Ga0501035_0047684
592 Ga0501035_0057445
593 Ga0501035_0058091
594 Ga0501044_0001239
595 Ga0501044_0018840
596 Ga0501044_0042774
597 Ga0501044_0044581
598 Ga0501044_0154887
599 Ga0501044_0194473
600 Ga0501044_0252368
601 Ga0501045_0001177
602 Ga0501045_0081974
603 Ga0501045_0180503
604 nmdc:mga03n38_5707_c1
605 nmdc:mga0yw44_40017_c1
606 nmdc:mga04h51_223_c1
607 nmdc:mga05p37_274_c1
608 nmdc:mga05p37_337132_c1
609 nmdc:mga05p37_63650_c1
610 nmdc:mga09592_28494_c1
611 nmdc:mga06r32_1692_c1
612 nmdc:mga06r32_588997_c1
613 nmdc:mga08y16_204_c1
614 nmdc:mga08y16_59854_c1
615 nmdc:mga0n895_3158_c1
616 nmdc:mga0n895_51293_c1
617 nmdc:mga0rr50_30727_c1
618 nmdc:mga0rr50_751_c1
619 nmdc:mga0rr50_81814_c1
620 nmdc:mga08x19_35919_c1
621 nmdc:mga0a205_84258_c1
622 nmdc:mga0a205_8819_c1
623 nmdc:mga0sz30_43635_c1
624 Ga0500643_000046
625 Ga0500566_0000381
626 Ga0500641_0053426
627 Ga0500555_001255
628 Ga0500562_009759
629 Ga0500569_009986
630 Ga0500595_009177
631 Ga0500608_084318
632 Ga0500568_0013548
633 Ga0500568_0017532
634 Ga0500588_0070664
635 Ga0500589_046435
636 Ga0500616_0000028
637 Ga0500620_002173
638 Ga0500622_0032062
639 Ga0500636_0000796
640 Ga0500601_000183
641 Ga0501084_0000224
642 Ga0501084_0006093
643 Ga0501084_0321247
644 Ga0501082_0002209
645 Ga0501082_0093574
646 Ga0501082_0405819
647 Ga0530510_0002646
648 Ga0530510_0024011
649 Ga0530510_0256431
650 2513622486
651 2513659324
652 2513700102
653 2513861756
654 2513921414
655 2517103892
656 2517893732
657 2524535868
658 2617372463
659 2671124227
660 2728752884
661 2793070767
662 2821449541
663 2824607044
664 2824613481
665 2824622900
666 2824631949
667 2824638528
668 2824650683
669 2824658238
670 2824716182
671 2824730763
672 2824738594
673 2824747105
674 2841959954
675 2844534498
676 2857513015
677 2874614826
678 2874635251
679 2881364694
680 2885377714
681 2885409781
682 2888393024
683 2888425358
684 2904701367
685 2906610609
686 2906641929
687 2906666120
688 2908744133
689 2908761686
690 2908780909
691 2922428715
692 2929620491
693 2929626384
694 2933582409
695 2935634687
696 2941509173
697 2941517002
698 2941524903
699 3005478848
700 8006942499
701 8006982224
702 8019558258
703 8019567038
704 8055745353

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02423

OCD_Mu_crystall

Ornithine cyclodeaminase/mu-crystallin family

56

362

0.93

PF01488

Shikimate_DH

Shikimate / quinate 5-dehydrogenase

162

264

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
6t3e-assembly1.cif.gz_A structure of thermococcus litoralis delta(1)-pyrroline-2-carboxylate reductase in complex with nadh and l-proline 0.9461 4 311
6t3e-assembly1.cif.gz_A structure of thermococcus litoralis delta(1)-pyrroline-2-carboxylate reductase in complex with nadh and l-proline 0.9315 4 311
1omo-assembly1.cif.gz_B alanine dehydrogenase dimer w/bound nad (archaeal) 0.9222 4 311
7rbp-assembly1.cif.gz_A medicago truncatula d-1-piperideine-2-carboxylic acid reductase 0.9127 1 312
7rbp-assembly1.cif.gz_A medicago truncatula d-1-piperideine-2-carboxylic acid reductase 0.9099 1 312
ID Description Score Start End Superfamily
af_Q9FLY0_138_305_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9813 129 292 3.40.50.720
af_Q9HDZ0_133_310_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9611 124 292 3.40.50.720
af_Q9FLY0_138_305_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9525 129 292 3.40.50.720
1vllA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9461 119 292 3.40.50.720
1vllA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9407 119 292 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A7J6VQT7-F1-model_v4 5'-AMP-activated protein kinase subunit gamma-1 0.9831 100 297 GO:0009507
GO:0016301
AF-A0A382Q9T1-F1-model_v4 Ornithine cyclodeaminase 0.9745 182 311 GO:0005737
AF-A0A1F7NAA5-F1-model_v4 Ornithine cyclodeaminase 0.9698 83 311 GO:0005737
AF-A0A699QYS0-F1-model_v4 Delta(1)-pyrroline-2-carboxylate reductase 0.9697 132 308 GO:0005737
AF-A0A7C6BB85-F1-model_v4 Ornithine cyclodeaminase 0.9676 50 310 GO:0005737

Map