F418663

General Info

Members Datasets Scaffolds Average Seq Length
351 233 341 443

Family's Representative Sequence

Representative Sequence 3300025986|Ga0207658_10119063|Ga0207658_101190632
Length 521
Sequence MRDTIAALATPPGRGGIGVIRVSGPLAASIAREILGELPRARRAVIRPFRDADGQTLDQGLALYFAAPASFTGEDVLELHGHGGPVVMDMLLARTLQLGARVAEAGEFSRRAFLNDKLDLAQAEAIADLIDSGSVEAARAALRSMQGEFSVAVNSLTEAVTETRMHVEAAIDFPEEEIDFLADTTLRARIDGAIELCAQIAAKARQGALLREGMTVVIAGRPNAGKSSLLNRLAGYDAAIVTAIPGTTRDVLRERIAIDGMPLHIADTAGLRDEADVVEAEGIRRARQEMTRADRILYVLDGELRADPAEVELANLPQDVPVTLVINKIDLLAMTSRYEQSQPPRLYVSAITGEGIDLLREHLKECMGFQGADSGTVSARRRHLDALTRADRHLQEARRQLLERRAGELMAEELRQAQRSLAEITGETEYFRASASASSELSSLVWPHPDRCPNLYKIACFLSKTVCRCADSAQVAAPSPGDGPGVDRARRRFPVGRSATRYGTYRYVPRSGCDPVVIFPQ

Samples

Sample ID Description Type Environment
1 2510065053 Pseudomonas sp. MOIL14HWK12:I1 Isolate Rhizosphere
2 2510065055 Pseudomonas sp. MOIL14HWK12:I2 Isolate Rhizosphere
3 2510065058 Pseudomonas oleovorans MOIL14HWK12 Isolate Rhizosphere
4 2773857672 Pseudomonas sp. 1766 Isolate Unclassified
5 2917832318 Pseudomonas rhizoryzae RY24 Isolate Unclassified
6 2919125081 Pseudomonas psychrotolerans 1545 Isolate Rhizosphere
7 2974298342 Pseudomonas sp. SORGH_AS 211 Isolate Unclassified
8 2984499530 Pseudomonas sp. SORGH_AS199 Isolate Aerial Root
9 2984504281 Pseudomonas psychrotolerans SORGH_AS201 Isolate Aerial Root
10 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
11 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
12 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
13 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
14 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
15 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
16 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
17 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
18 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
21 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
22 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
23 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
24 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
25 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
26 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
27 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
28 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
29 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
30 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
31 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
32 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
33 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
34 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
35 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
36 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
37 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
38 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
39 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
40 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
41 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
42 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
43 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
44 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
45 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
47 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
48 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
49 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
50 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
51 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
52 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
53 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
54 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
55 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
57 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
58 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
59 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
61 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
62 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
64 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
65 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
66 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
67 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
68 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
69 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
70 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
71 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
72 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
73 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
74 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
75 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
76 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
77 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
113 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
114 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
115 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
116 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
117 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
119 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
120 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
121 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
122 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
123 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
124 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
125 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
126 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
127 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
128 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
129 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
130 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
131 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
132 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
133 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
134 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
135 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
136 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
137 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
138 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
139 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
140 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
141 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
142 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
143 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
144 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
145 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
146 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
147 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
148 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
149 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
150 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
151 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
152 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
153 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
154 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
155 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
156 3300042124 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_082716_2423 Metagenome Rhizosphere
157 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
158 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
159 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
160 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
161 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
162 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
163 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
164 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
165 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
166 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
167 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
168 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
169 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
170 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
171 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
172 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
173 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
174 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
175 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
176 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
177 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
178 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
179 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
180 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
181 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
182 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
183 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
184 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
185 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
186 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
187 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
188 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
189 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
190 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
191 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
192 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
193 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
194 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
195 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
196 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
197 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
198 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
199 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
200 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
201 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
202 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
203 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
204 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
205 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
206 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
207 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
208 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
209 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
210 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
211 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
212 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
213 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
214 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
215 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
216 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
217 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
218 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
219 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
220 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
221 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
222 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
223 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
224 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
225 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
226 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
227 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
228 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
229 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
230 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
231 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
232 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
233 8016728285 Pseudomonas psychrotolerans SORGH_AS 227 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 94.87
Metatranscriptomes 2.28
Isolates 2.85

Biome Distribution

Category Percentage (%)
Aerial Root 0.57
Bulb 0
Endosphere 0.85
Nodule 0
Rhizoplane 1.71
Rhizosphere 94.02
Stem 0
Stem Tuber 0
Unclassified 2.85

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065704_10082922 3300005289 Bacteria 3534
2 Ga0065707_10083751 3300005295 Bacteria 8322
3 Ga0070680_100079152 3300005336 Bacteria 2709
4 Ga0068868_100202654 3300005338 Bacteria 1655
5 Ga0070689_100018029 3300005340 Bacteria 5194
6 Ga0070687_100037528 3300005343 Bacteria 2423
7 Ga0070669_100005461 3300005353 Bacteria 9173
8 Ga0070675_100001514 3300005354 Bacteria 17172
9 Ga0070675_100004933 3300005354 Bacteria 10175
10 Ga0070674_100174086 3300005356 Bacteria 1643
11 Ga0070673_100048827 3300005364 Bacteria 3301
12 Ga0070688_100007118 3300005365 Bacteria 6020
13 Ga0070667_100140575 3300005367 Bacteria 2114
14 Ga0070714_100002036 3300005435 Bacteria 14806
15 Ga0070713_100073546 3300005436 Bacteria 2893
16 Ga0070701_10048973 3300005438 Bacteria 2183
17 Ga0070705_100012080 3300005440 Bacteria 4378
18 Ga0070694_100031510 3300005444 Bacteria 3477
19 Ga0070694_100049006 3300005444 Bacteria 2843
20 Ga0070681_10240319 3300005458 Bacteria 1725
21 Ga0068853_100097113 3300005539 Bacteria 2600
22 Ga0070672_100096863 3300005543 Bacteria 2388
23 Ga0070695_100004475 3300005545 Bacteria 8212
24 Ga0070696_100001127 3300005546 Bacteria 17294
25 Ga0070704_100023528 3300005549 Bacteria 4027
26 Ga0070704_100023699 3300005549 Bacteria 4015
27 Ga0068855_100000106 3300005563 Bacteria 103864
28 Ga0068855_100039261 3300005563 Bacteria 5620
29 Ga0070664_100130556 3300005564 Bacteria 2207
30 Ga0068856_100043067 3300005614 Bacteria 4442
31 Ga0070702_100001053 3300005615 Bacteria 10984
32 Ga0068852_100028455 3300005616 Bacteria 4575
33 Ga0068852_100204007 3300005616 Bacteria 1872
34 Ga0068859_100002624 3300005617 Bacteria 18291
35 Ga0068864_100003825 3300005618 Bacteria 12407
36 Ga0068861_100004751 3300005719 Bacteria 9132
37 Ga0068861_100026114 3300005719 Bacteria 4243
38 Ga0068861_100037102 3300005719 Bacteria 3622
39 Ga0068870_10015093 3300005840 Bacteria 3659
40 Ga0068863_100004912 3300005841 Bacteria 13173
41 Ga0068858_100032707 3300005842 Bacteria 4830
42 Ga0068862_100010158 3300005844 Bacteria 7767
43 Ga0068862_100010884 3300005844 Bacteria 7511
44 Ga0068862_100018817 3300005844 Bacteria 5755
45 Ga0068862_100127636 3300005844 Bacteria 2247
46 Ga0097621_100014940 3300006237 Bacteria 5827
47 Ga0068871_100171494 3300006358 Bacteria 1860
48 Ga0075428_100002697 3300006844 Bacteria 19313
49 Ga0075428_100014430 3300006844 Bacteria 8777
50 Ga0075428_100018809 3300006844 Bacteria 7638
51 Ga0075428_100025934 3300006844 Bacteria 6491
52 Ga0075428_100081010 3300006844 Bacteria 3543
53 Ga0075428_100294889 3300006844 Bacteria 1744
54 Ga0075430_100166955 3300006846 Bacteria 1831
55 Ga0075431_100000328 3300006847 Bacteria 37639
56 Ga0075431_100008916 3300006847 Bacteria 10051
57 Ga0075431_100022575 3300006847 Bacteria 6434
58 Ga0075433_10000078 3300006852 Bacteria 44001
59 Ga0075434_100000130 3300006871 Bacteria 45069
60 Ga0075434_100043932 3300006871 Bacteria 4432
61 Ga0075429_100031001 3300006880 Bacteria 4647
62 Ga0068865_100041263 3300006881 Bacteria 3139
63 Ga0068865_100091116 3300006881 Bacteria 2212
64 Ga0075436_100002777 3300006914 Bacteria 12003
65 Ga0075436_100016790 3300006914 Bacteria 5011
66 Ga0097620_100002624 3300006931 Bacteria 18291
67 Ga0075435_100035270 3300007076 Bacteria 3969
68 Ga0075435_100040106 3300007076 Bacteria 3738
69 Ga0075435_100048419 3300007076 Bacteria 3415
70 Ga0105251_10001837 3300009011 Bacteria 17472
71 Ga0105240_10000653 3300009093 Bacteria 63948
72 Ga0105240_10022200 3300009093 Bacteria 8419
73 Ga0111539_10001858 3300009094 Bacteria 28049
74 Ga0111539_10003393 3300009094 Bacteria 20988
75 Ga0111539_10209606 3300009094 Bacteria 2271
76 Ga0111539_10240697 3300009094 Bacteria 2107
77 Ga0105245_10248767 3300009098 Bacteria 1726
78 Ga0105247_10015997 3300009101 Bacteria 4495
79 Ga0114129_10037673 3300009147 Bacteria 6826
80 Ga0105241_10016347 3300009174 Bacteria 5441
81 Ga0105242_10016914 3300009176 Bacteria 5676
82 Ga0105248_10032750 3300009177 Bacteria 5806
83 Ga0105238_10008007 3300009551 Bacteria 10572
84 Ga0105249_10002900 3300009553 Bacteria 14786
85 Ga0105249_10005580 3300009553 Bacteria 10880
86 Ga0105239_10001093 3300010375 Bacteria 37498
87 Ga0105239_10009490 3300010375 Bacteria 10958
88 Ga0157371_10111156 3300013102 Bacteria 1945
89 Ga0157369_10000011 3300013105 Bacteria 271560
90 Ga0157369_10003150 3300013105 Bacteria 19699
91 Ga0157369_10004214 3300013105 Bacteria 17028
92 Ga0157369_10038054 3300013105 Bacteria 5262
93 Ga0157374_10000086 3300013296 Bacteria 91348
94 Ga0157378_10002660 3300013297 Bacteria 15895
95 Ga0157375_10000590 3300013308 Bacteria 32228
96 Ga0163163_10014522 3300014325 Bacteria 7244
97 Ga0163163_10083628 3300014325 Bacteria 3197
98 Ga0157380_10008547 3300014326 Bacteria 7320
99 Ga0157380_10030636 3300014326 Bacteria 4122
100 Ga0157376_10021741 3300014969 Bacteria 4986
101 Ga0207713_1007917 3300025735 Bacteria 6192
102 Ga0207688_10049575 3300025901 Bacteria 2347
103 Ga0207699_10121747 3300025906 Bacteria 1688
104 Ga0207645_10021877 3300025907 Bacteria 4166
105 Ga0207645_10021941 3300025907 Bacteria 4159
106 Ga0207643_10034369 3300025908 Bacteria 2841
107 Ga0207695_10000012 3300025913 Bacteria 840961
108 Ga0207695_10002032 3300025913 Bacteria 31044
109 Ga0207671_10000863 3300025914 Bacteria 38411
110 Ga0207671_10001099 3300025914 Bacteria 32647
111 Ga0207663_10009563 3300025916 Bacteria 5128
112 Ga0207662_10049124 3300025918 Bacteria 2502
113 Ga0207681_10010249 3300025923 Bacteria 5738
114 Ga0207694_10000638 3300025924 Bacteria 31612
115 Ga0207687_10143772 3300025927 Bacteria 1812
116 Ga0207700_10058832 3300025928 Bacteria 2905
117 Ga0207664_10010730 3300025929 Bacteria 6479
118 Ga0207706_10028583 3300025933 Bacteria 4980
119 Ga0207706_10037103 3300025933 Bacteria 4328
120 Ga0207686_10034257 3300025934 Bacteria 3038
121 Ga0207686_10069325 3300025934 Bacteria 2262
122 Ga0207669_10033079 3300025937 Bacteria 2913
123 Ga0207704_10003404 3300025938 Bacteria 7225
124 Ga0207704_10066490 3300025938 Bacteria 2263
125 Ga0207704_10102113 3300025938 Bacteria 1914
126 Ga0207704_10112579 3300025938 Bacteria 1843
127 Ga0207691_10015018 3300025940 Bacteria 7369
128 Ga0207691_10139800 3300025940 Bacteria 2134
129 Ga0207689_10012579 3300025942 Bacteria 7230
130 Ga0207689_10093846 3300025942 Bacteria 2465
131 Ga0207679_10036706 3300025945 Bacteria 3477
132 Ga0207667_10000026 3300025949 Bacteria 343713
133 Ga0207667_10094814 3300025949 Bacteria 3081
134 Ga0207651_10001979 3300025960 Bacteria 9638
135 Ga0207712_10005341 3300025961 Bacteria 8113
136 Ga0207712_10020637 3300025961 Bacteria 4318
137 Ga0207668_10045892 3300025972 Bacteria 2982
138 Ga0207658_10119063 3300025986 Bacteria 2102
139 Ga0207703_10074429 3300026035 Bacteria 2812
140 Ga0207708_10023593 3300026075 Bacteria 4651
141 Ga0207641_10008156 3300026088 Bacteria 8667
142 Ga0207648_10000544 3300026089 Bacteria 42055
143 Ga0207648_10025316 3300026089 Bacteria 5288
144 Ga0207676_10007896 3300026095 Bacteria 7569
145 Ga0207674_10114459 3300026116 Bacteria 2669
146 Ga0207675_100008823 3300026118 Bacteria 9463
147 Ga0207675_100013288 3300026118 Bacteria 7686
148 Ga0207675_100083925 3300026118 Bacteria 2989
149 Ga0207675_100151498 3300026118 Bacteria 2207
150 Ga0207683_10006223 3300026121 Bacteria 10230
151 Ga0207698_10064339 3300026142 Bacteria 2874
152 Ga0209970_1005694 3300027614 Bacteria 2052
153 Ga0209983_1007047 3300027665 Bacteria 2308
154 Ga0209971_1001314 3300027682 Bacteria 6182
155 Ga0209974_10000585 3300027876 Bacteria 12214
156 Ga0207428_10037391 3300027907 Bacteria 3949
157 Ga0207428_10096508 3300027907 Bacteria 2289
158 Ga0207428_10125672 3300027907 Bacteria 1964
159 Ga0268265_10005164 3300028380 Bacteria 8941
160 Ga0268265_10045238 3300028380 Bacteria 3283
161 Ga0268265_10147576 3300028380 Bacteria 1979
162 Ga0265334_10000021 3300028573 Bacteria 132223
163 Ga0265338_10012909 3300028800 Bacteria 9490
164 Ga0265338_10072448 3300028800 Bacteria 2941
165 Ga0265328_10011843 3300031239 Bacteria 3479
166 Ga0265327_10000393 3300031251 Bacteria 82261
167 Ga0265327_10003818 3300031251 Bacteria 13925
168 Ga0265316_10001475 3300031344 Bacteria 25202
169 Ga0307509_10000303 3300031507 Bacteria 81244
170 Ga0307408_100058267 3300031548 Bacteria 2807
171 Ga0265313_10000926 3300031595 Bacteria 29218
172 Ga0316575_10002017 3300031665 Bacteria 6745
173 Ga0316579_10000386 3300031691 Bacteria 13892
174 Ga0316576_10000419 3300031727 Bacteria 19563
175 Ga0316576_10001037 3300031727 Bacteria 14384
176 Ga0316576_10002830 3300031727 Bacteria 9990
177 Ga0316576_10006019 3300031727 Bacteria 7496
178 Ga0316578_10003517 3300031728 Bacteria 7190
179 Ga0316578_10005410 3300031728 Bacteria 6189
180 Ga0316578_10083720 3300031728 Bacteria 1900
181 Ga0307516_10119367 3300031730 Bacteria 2429
182 Ga0316577_10000907 3300031733 Bacteria 13086
183 Ga0316577_10027932 3300031733 Bacteria 3146
184 Ga0307410_10034340 3300031852 Bacteria 3284
185 Ga0307406_10007367 3300031901 Bacteria 6099
186 Ga0307412_10145832 3300031911 Bacteria 1740
187 Ga0307409_100031491 3300031995 Bacteria 3829
188 Ga0307416_100110509 3300032002 Bacteria 2420
189 Ga0307416_100124638 3300032002 Bacteria 2305
190 Ga0307416_100143835 3300032002 Bacteria 2173
191 Ga0316583_10004345 3300032133 Bacteria 5055
192 Ga0316585_10018666 3300032137 Bacteria 2107
193 Ga0316580_10000080 3300032139 Bacteria 16779
194 Ga0316580_10000952 3300032139 Bacteria 7194
195 Ga0316593_10000986 3300032168 Bacteria 5895
196 Ga0316593_10001415 3300032168 Bacteria 5275
197 Ga0316593_10012174 3300032168 Bacteria 2520
198 Ga0316593_10018023 3300032168 Bacteria 2163
199 Ga0316592_1001270 3300033524 Bacteria 3999
200 Ga0316588_1000923 3300033528 Bacteria 4518
201 Ga0316596_1000330 3300033541 Bacteria 7676
202 Ga0316596_1000450 3300033541 Bacteria 6884
203 Ga0373955_0114962 3300035172 Bacteria 1559
204 Ga0316574_0000074 3300035398 Bacteria 27344
205 Ga0316574_0001720 3300035398 Bacteria 10594
206 Ga0316574_0004089 3300035398 Bacteria 7602
207 Ga0316574_0004722 3300035398 Bacteria 7189
208 Ga0316574_0016875 3300035398 Bacteria 4262
209 Ga0316574_0023013 3300035398 Bacteria 3716
210 Ga0316574_0063555 3300035398 Bacteria 2322
211 Ga0373927_0000001 3300035695 Bacteria 1082160
212 Ga0373937_0001723 3300036401 Bacteria 18385
213 Ga0316582_0005089 3300036647 Bacteria 6726
214 Ga0316582_0028103 3300036647 Bacteria 3405
215 Ga0316584_0000694 3300036712 Bacteria 18608
216 Ga0316584_0034132 3300036712 Bacteria 3771
217 Ga0316584_0042410 3300036712 Bacteria 3393
218 Ga0316584_0091794 3300036712 Bacteria 2273
219 Ga0400483_078821 3300039062 Bacteria 25602
220 Ga0439461_0000411 3300041410 Bacteria 6176
221 Ga0451807_0843375 3300041486 Bacteria 1586
222 Ga0439431_0011387 3300041997 Bacteria 2032
223 Ga0439441_003891 3300042001 Bacteria 2231
224 Ga0450920_002937 3300042122 Bacteria 2931
225 Ga0450922_002281 3300042124 Bacteria 1814
226 Ga0450923_000210 3300042125 Bacteria 5586
227 Ga0450898_001995 3300042134 Bacteria 2793
228 Ga0439446_0000379 3300042156 Bacteria 8582
229 Ga0439446_0009831 3300042156 Bacteria 2567
230 Ga0450908_006969 3300042184 Bacteria 2140
231 Ga0439434_0001027 3300042435 Bacteria 8075
232 Ga0439435_0000513 3300042436 Bacteria 6185
233 Ga0439444_0000603 3300042437 Bacteria 4126
234 Ga0439460_0002889 3300042461 Bacteria 4139
235 Ga0450918_000823 3300042531 Bacteria 6523
236 Ga0451577_0029209 3300042876 Bacteria 4982
237 Ga0451577_0158399 3300042876 Bacteria 2038
238 Ga0453684_0000019 3300044712 Bacteria 908702
239 Ga0453684_0011750 3300044712 Bacteria 14601
240 Ga0453684_0108996 3300044712 Bacteria 3369
241 Ga0453684_0353764 3300044712 Bacteria 1655
242 Ga0451576_0000929 3300045051 Bacteria 55238
243 Ga0451576_0014640 3300045051 Bacteria 8718
244 Ga0451576_0050660 3300045051 Bacteria 4354
245 Ga0451576_0129990 3300045051 Bacteria 2625
246 Ga0451576_0265331 3300045051 Bacteria 1795
247 Ga0451576_0354340 3300045051 Bacteria 1536
248 Ga0495592_0001386 3300046454 Bacteria 16767
249 Ga0495638_0002174 3300046460 Bacteria 16439
250 Ga0495638_0019916 3300046460 Bacteria 4436
251 Ga0495580_0035210 3300046472 Bacteria 3601
252 Ga0495662_0017646 3300046476 Bacteria 3455
253 Ga0495608_0007504 3300046511 Bacteria 7698
254 Ga0495628_0004637 3300046516 Bacteria 12138
255 Ga0495630_0004936 3300046517 Bacteria 9379
256 Ga0495640_0018222 3300046533 Bacteria 5215
257 Ga0495586_0001573 3300046535 Bacteria 12585
258 Ga0495625_0002392 3300046660 Bacteria 20364
259 Ga0495635_0053808 3300046663 Bacteria 2773
260 Ga0495599_0037397 3300046678 Bacteria 3049
261 Ga0495658_0069565 3300046683 Bacteria 2040
262 Ga0495604_0010011 3300047317 Bacteria 7506
263 Ga0495680_0001289 3300047322 Bacteria 27343
264 Ga0496104_0000018 3300048907 Bacteria 258184
265 Ga0496105_0000044 3300048908 Bacteria 112155
266 Ga0496108_0275380 3300048911 Bacteria 1465
267 Ga0496109_0106202 3300048912 Bacteria 2608
268 Ga0496112_0131159 3300048915 Bacteria 2477
269 Ga0496116_0000008 3300048919 Bacteria 726753
270 Ga0496118_0063998 3300048921 Bacteria 2702
271 Ga0496121_0000012 3300048924 Bacteria 653131
272 Ga0495682_0003674 3300049460 Bacteria 6764
273 Ga0501032_0023413 3300049569 Bacteria 4267
274 Ga0501034_0196454 3300049571 Bacteria 1977
275 Ga0501038_0000042 3300049574 Bacteria 115753
276 Ga0501038_0090831 3300049574 Bacteria 2559
277 Ga0501039_0007955 3300049575 Bacteria 8072
278 Ga0501039_0055420 3300049575 Bacteria 3070
279 Ga0501040_0010559 3300049576 Bacteria 6039
280 Ga0501040_0089777 3300049576 Bacteria 2135
281 Ga0501041_0002941 3300049577 Bacteria 9772
282 Ga0501041_0079704 3300049577 Bacteria 2016
283 Ga0501042_0021433 3300049578 Bacteria 4504
284 Ga0501046_0144445 3300049580 Bacteria 1798
285 Ga0501047_0001549 3300049581 Bacteria 22497
286 Ga0501047_0029844 3300049581 Bacteria 5256
287 Ga0501048_0116636 3300049582 Bacteria 1886
288 Ga0501067_0004370 3300049583 Bacteria 7788
289 Ga0501068_0012999 3300049584 Bacteria 4730
290 Ga0501068_0093646 3300049584 Bacteria 1856
291 Ga0501069_0074746 3300049585 Bacteria 1902
292 Ga0501070_0025580 3300049586 Bacteria 4951
293 Ga0501071_0004121 3300049587 Bacteria 9188
294 Ga0501071_0010169 3300049587 Bacteria 6295
295 Ga0501071_0091687 3300049587 Bacteria 2232
296 Ga0501072_0179102 3300049588 Bacteria 1691
297 Ga0501073_0002048 3300049589 Bacteria 15053
298 Ga0501074_0053019 3300049590 Bacteria 2927
299 Ga0501074_0053140 3300049590 Bacteria 2924
300 Ga0501075_0013945 3300049591 Bacteria 5749
301 Ga0501075_0025307 3300049591 Bacteria 4361
302 Ga0501075_0171939 3300049591 Bacteria 1654
303 Ga0501076_0005763 3300049592 Bacteria 8931
304 Ga0501076_0007140 3300049592 Bacteria 8119
305 Ga0501077_0086997 3300049593 Bacteria 1981
306 Ga0501079_0003227 3300049741 Bacteria 11941
307 Ga0501079_0007347 3300049741 Bacteria 8330
308 Ga0501079_0053215 3300049741 Bacteria 3123
309 Ga0501079_0070472 3300049741 Bacteria 2700
310 Ga0501080_0033099 3300049742 Bacteria 4824
311 Ga0501081_0021124 3300049743 Bacteria 4345
312 Ga0501081_0033532 3300049743 Bacteria 3489
313 Ga0501081_0068614 3300049743 Bacteria 2469
314 Ga0501081_0094711 3300049743 Bacteria 2104
315 Ga0501081_0216031 3300049743 Bacteria 1394
316 Ga0501035_0063407 3300049822 Bacteria 3287
317 Ga0501044_0000033 3300049823 Bacteria 167177
318 nmdc:mga05p37_215434_c1 3300050507 Bacteria 2320
319 nmdc:mga05p37_80284_c1 3300050507 Bacteria 4018
320 nmdc:mga09592_193477_c1 3300050508 Bacteria 1761
321 nmdc:mga0qj67_74443_c1 3300050509 Bacteria 2714
322 nmdc:mga06r32_122987_c1 3300050510 Bacteria 2561
323 nmdc:mga06r32_17138_c1 3300050510 Bacteria 6613
324 nmdc:mga06r32_37_c1 3300050510 Bacteria 80459
325 nmdc:mga08y16_187073_c1 3300050511 Bacteria 2149
326 nmdc:mga08y16_24661_c1 3300050511 Bacteria 6348
327 nmdc:mga08y16_36661_c1 3300050511 Bacteria 5150
328 nmdc:mga08y16_57970_c1 3300050511 Bacteria 4047
329 nmdc:mga0rr50_16584_c1 3300050513 Bacteria 4898
330 nmdc:mga08x19_19027_c1 3300050514 Bacteria 4211
331 nmdc:mga08x19_61437_c1 3300050514 Bacteria 2435
332 Ga0495601_0082227 3300053077 Bacteria 2067
333 Ga0500566_0030685 3300053094 Bacteria 3134
334 Ga0500655_006915 3300053133 Bacteria 2040
335 Ga0500622_0008923 3300053156 Bacteria 5577
336 Ga0501084_0051484 3300054114 Bacteria 3446
337 Ga0501084_0058860 3300054114 Bacteria 3215
338 Ga0501082_0002041 3300060353 Bacteria 17752
339 Ga0501082_0006307 3300060353 Bacteria 10287
340 Ga0530510_0014407 3300061734 Bacteria 5575
341 Ga0530510_0050551 3300061734 Bacteria 3002

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049590 Ga0501074_0053140 Ga0501074_0053140_1710_2897 378
2 3300032168 Ga0316593_10000986 Ga0316593_100009863 387
3 3300033541 Ga0316596_1000330 Ga0316596_10003305 387
4 3300031727 Ga0316576_10002830 Ga0316576_100028306 392
5 3300035172 Ga0373955_0114962 Ga0373955_0114962_75_1307 394
6 3300039062 Ga0400483_078821 Ga0400483_078821_10570_11850 396
7 3300031251 Ga0265327_10003818 Ga0265327_100038189 397
8 3300028800 Ga0265338_10072448 Ga0265338_100724482 398
9 3300044712 Ga0453684_0108996 Ga0453684_0108996_30_1292 403
10 3300041486 Ga0451807_0843375 Ga0451807_0843375_95_1441 404
11 3300031251 Ga0265327_10000393 Ga0265327_1000039345 406
12 3300031344 Ga0265316_10001475 Ga0265316_100014756 406
13 3300006358 Ga0068871_100171494 Ga0068871_1001714941 407
14 3300049583 Ga0501067_0004370 Ga0501067_0004370_1086_2423 407
15 3300049589 Ga0501073_0002048 Ga0501073_0002048_4775_6112 407
16 3300049741 Ga0501079_0070472 Ga0501079_0070472_1238_2575 407
17 3300049742 Ga0501080_0033099 Ga0501080_0033099_375_1712 407
18 3300054114 Ga0501084_0051484 Ga0501084_0051484_38_1375 407
19 3300060353 Ga0501082_0002041 Ga0501082_0002041_11643_12980 407
20 3300005842 Ga0068858_100032707 Ga0068858_1000327072 408
21 3300013308 Ga0157375_10000590 Ga0157375_1000059022 408
22 3300025934 Ga0207686_10034257 Ga0207686_100342573 408
23 3300025938 Ga0207704_10003404 Ga0207704_100034043 408
24 3300026035 Ga0207703_10074429 Ga0207703_100744292 408
25 3300031239 Ga0265328_10011843 Ga0265328_100118433 409
26 3300036712 Ga0316584_0034132 Ga0316584_0034132_1471_2844 409
27 3300049581 Ga0501047_0001549 Ga0501047_0001549_8493_9806 409
28 3300005444 Ga0070694_100031510 Ga0070694_1000315102 411
29 3300005844 Ga0068862_100010884 Ga0068862_1000108843 411
30 3300009011 Ga0105251_10001837 Ga0105251_100018379 411
31 3300013105 Ga0157369_10004214 Ga0157369_100042142 411
32 3300025735 Ga0207713_1007917 Ga0207713_10079172 411
33 3300025940 Ga0207691_10015018 Ga0207691_100150182 411
34 3300045051 Ga0451576_0050660 Ga0451576_0050660_2742_4064 411
35 3300031728 Ga0316578_10005410 Ga0316578_100054104 413
36 3300035398 Ga0316574_0004722 Ga0316574_0004722_4692_6038 413
37 3300045051 Ga0451576_0129990 Ga0451576_0129990_817_2157 413
38 3300005539 Ga0068853_100097113 Ga0068853_1000971132 414
39 3300005563 Ga0068855_100000106 Ga0068855_10000010629 414
40 3300005616 Ga0068852_100028455 Ga0068852_1000284554 414
41 3300009093 Ga0105240_10000653 Ga0105240_1000065339 414
42 3300010375 Ga0105239_10001093 Ga0105239_1000109327 414
43 3300010375 Ga0105239_10009490 Ga0105239_100094909 414
44 3300013105 Ga0157369_10003150 Ga0157369_100031503 414
45 3300013105 Ga0157369_10038054 Ga0157369_100380543 414
46 3300025913 Ga0207695_10000012 Ga0207695_10000012364 414
47 3300025949 Ga0207667_10000026 Ga0207667_100000262 414
48 3300026142 Ga0207698_10064339 Ga0207698_100643393 414
49 3300031730 Ga0307516_10119367 Ga0307516_101193672 414
50 3300049460 Ga0495682_0003674 Ga0495682_0003674_4357_5670 414
51 3300053133 Ga0500655_006915 Ga0500655_006915_704_2017 414
52 3300031665 Ga0316575_10002017 Ga0316575_100020174 415
53 3300031691 Ga0316579_10000386 Ga0316579_100003868 415
54 3300031727 Ga0316576_10001037 Ga0316576_100010377 415
55 3300031733 Ga0316577_10000907 Ga0316577_100009074 415
56 3300032139 Ga0316580_10000080 Ga0316580_100000806 415
57 3300035398 Ga0316574_0000074 Ga0316574_0000074_9624_10958 415
58 3300036647 Ga0316582_0005089 Ga0316582_0005089_4071_5405 415
59 3300036712 Ga0316584_0000694 Ga0316584_0000694_8726_10060 415
60 3300049574 Ga0501038_0000042 Ga0501038_0000042_114179_115507 415
61 3300046454 Ga0495592_0001386 Ga0495592_0001386_3097_4404 416
62 3300046472 Ga0495580_0035210 Ga0495580_0035210_877_2223 416
63 3300046476 Ga0495662_0017646 Ga0495662_0017646_1224_2531 416
64 3300046511 Ga0495608_0007504 Ga0495608_0007504_1154_2461 416
65 3300046516 Ga0495628_0004637 Ga0495628_0004637_4015_5322 416
66 3300046517 Ga0495630_0004936 Ga0495630_0004936_7599_8906 416
67 3300046533 Ga0495640_0018222 Ga0495640_0018222_3793_5100 416
68 3300046535 Ga0495586_0001573 Ga0495586_0001573_9867_11174 416
69 3300046663 Ga0495635_0053808 Ga0495635_0053808_634_1941 416
70 3300046678 Ga0495599_0037397 Ga0495599_0037397_814_2121 416
71 3300047317 Ga0495604_0010011 Ga0495604_0010011_4897_6204 416
72 3300047322 Ga0495680_0001289 Ga0495680_0001289_9850_11157 416
73 3300053077 Ga0495601_0082227 Ga0495601_0082227_247_1554 416
74 3300031911 Ga0307412_10145832 Ga0307412_101458322 417
75 3300032002 Ga0307416_100124638 Ga0307416_1001246381 417
76 3300032133 Ga0316583_10004345 Ga0316583_100043453 417
77 3300036401 Ga0373937_0001723 Ga0373937_0001723_6395_7786 417
78 3300046683 Ga0495658_0069565 Ga0495658_0069565_142_1533 417
79 3300053094 Ga0500566_0030685 Ga0500566_0030685_1023_2414 417
80 3300013102 Ga0157371_10111156 Ga0157371_101111561 419
81 3300007076 Ga0075435_100040106 Ga0075435_1000401062 420
82 3300048907 Ga0496104_0000018 Ga0496104_0000018_194383_195774 420
83 3300048908 Ga0496105_0000044 Ga0496105_0000044_48871_50262 420
84 3300005440 Ga0070705_100012080 Ga0070705_1000120802 421
85 3300005545 Ga0070695_100004475 Ga0070695_1000044752 421
86 3300005546 Ga0070696_100001127 Ga0070696_10000112713 421
87 3300005549 Ga0070704_100023699 Ga0070704_1000236992 421
88 3300006914 Ga0075436_100016790 Ga0075436_1000167903 421
89 3300014325 Ga0163163_10083628 Ga0163163_100836282 421
90 3300044712 Ga0453684_0000019 Ga0453684_0000019_802167_803534 421
91 3300050514 nmdc:mga08x19_19027_c1 nmdc:mga08x19_19027_c1_2466_3788 421
92 3300006844 Ga0075428_100014430 Ga0075428_1000144309 422
93 3300006847 Ga0075431_100022575 Ga0075431_1000225754 422
94 3300049585 Ga0501069_0074746 Ga0501069_0074746_440_1765 422
95 3300005614 Ga0068856_100043067 Ga0068856_1000430675 424
96 3300009093 Ga0105240_10022200 Ga0105240_100222006 424
97 3300009174 Ga0105241_10016347 Ga0105241_100163475 424
98 3300009551 Ga0105238_10008007 Ga0105238_100080074 424
99 3300013105 Ga0157369_10000011 Ga0157369_10000011163 424
100 3300025913 Ga0207695_10002032 Ga0207695_100020322 424
101 3300025914 Ga0207671_10000863 Ga0207671_1000086318 424
102 3300025914 Ga0207671_10001099 Ga0207671_1000109911 424
103 3300025924 Ga0207694_10000638 Ga0207694_1000063812 424
104 3300032137 Ga0316585_10018666 Ga0316585_100186661 424
105 3300032139 Ga0316580_10000952 Ga0316580_100009525 424
106 3300033524 Ga0316592_1001270 Ga0316592_10012701 424
107 3300033528 Ga0316588_1000923 Ga0316588_10009231 424
108 3300035398 Ga0316574_0016875 Ga0316574_0016875_2467_3822 424
109 3300036712 Ga0316584_0091794 Ga0316584_0091794_507_1862 424
110 3300049575 Ga0501039_0055420 Ga0501039_0055420_1558_2883 424
111 3300049576 Ga0501040_0010559 Ga0501040_0010559_2058_3383 424
112 3300049577 Ga0501041_0002941 Ga0501041_0002941_5443_6768 424
113 3300049578 Ga0501042_0021433 Ga0501042_0021433_2850_4175 424
114 3300049584 Ga0501068_0093646 Ga0501068_0093646_481_1806 424
115 3300049591 Ga0501075_0013945 Ga0501075_0013945_2980_4305 424
116 3300049592 Ga0501076_0005763 Ga0501076_0005763_4874_6199 424
117 3300049593 Ga0501077_0086997 Ga0501077_0086997_270_1595 424
118 3300049741 Ga0501079_0003227 Ga0501079_0003227_10017_11342 424
119 3300049741 Ga0501079_0007347 Ga0501079_0007347_4933_6261 424
120 3300049743 Ga0501081_0033532 Ga0501081_0033532_1565_2890 424
121 3300054114 Ga0501084_0058860 Ga0501084_0058860_524_1849 424
122 3300060353 Ga0501082_0006307 Ga0501082_0006307_3981_5306 424
123 3300061734 Ga0530510_0050551 Ga0530510_0050551_747_2072 424
124 3300005435 Ga0070714_100002036 Ga0070714_10000203611 426
125 3300009176 Ga0105242_10016914 Ga0105242_100169145 426
126 3300013296 Ga0157374_10000086 Ga0157374_1000008637 426
127 3300013297 Ga0157378_10002660 Ga0157378_100026608 426
128 3300025929 Ga0207664_10010730 Ga0207664_100107302 426
129 3300031727 Ga0316576_10006019 Ga0316576_100060193 427
130 3300032168 Ga0316593_10001415 Ga0316593_100014153 427
131 3300032168 Ga0316593_10018023 Ga0316593_100180231 427
132 3300033541 Ga0316596_1000450 Ga0316596_10004504 427
133 3300041997 Ga0439431_0011387 Ga0439431_0011387_47_1381 427
134 3300042531 Ga0450918_000823 Ga0450918_000823_4026_5360 427
135 3300049587 Ga0501071_0091687 Ga0501071_0091687_331_1665 427
136 3300049591 Ga0501075_0025307 Ga0501075_0025307_1909_3243 427
137 3300049743 Ga0501081_0068614 Ga0501081_0068614_876_2210 427
138 3300005338 Ga0068868_100202654 Ga0068868_1002026541 428
139 3300005340 Ga0070689_100018029 Ga0070689_1000180292 428
140 3300005343 Ga0070687_100037528 Ga0070687_1000375282 428
141 3300005354 Ga0070675_100001514 Ga0070675_1000015148 428
142 3300005354 Ga0070675_100004933 Ga0070675_1000049336 428
143 3300005364 Ga0070673_100048827 Ga0070673_1000488272 428
144 3300005365 Ga0070688_100007118 Ga0070688_1000071185 428
145 3300005367 Ga0070667_100140575 Ga0070667_1001405751 428
146 3300005436 Ga0070713_100073546 Ga0070713_1000735462 428
147 3300005438 Ga0070701_10048973 Ga0070701_100489731 428
148 3300005543 Ga0070672_100096863 Ga0070672_1000968633 428
149 3300005549 Ga0070704_100023528 Ga0070704_1000235284 428
150 3300005564 Ga0070664_100130556 Ga0070664_1001305561 428
151 3300005615 Ga0070702_100001053 Ga0070702_1000010537 428
152 3300005616 Ga0068852_100204007 Ga0068852_1002040072 428
153 3300005617 Ga0068859_100002624 Ga0068859_1000026246 428
154 3300005618 Ga0068864_100003825 Ga0068864_1000038259 428
155 3300005719 Ga0068861_100004751 Ga0068861_1000047516 428
156 3300005840 Ga0068870_10015093 Ga0068870_100150933 428
157 3300005841 Ga0068863_100004912 Ga0068863_1000049121 428
158 3300005844 Ga0068862_100018817 Ga0068862_1000188175 428
159 3300006237 Ga0097621_100014940 Ga0097621_1000149405 428
160 3300006844 Ga0075428_100002697 Ga0075428_1000026977 428
161 3300006852 Ga0075433_10000078 Ga0075433_1000007810 428
162 3300006871 Ga0075434_100000130 Ga0075434_10000013027 428
163 3300006881 Ga0068865_100041263 Ga0068865_1000412633 428
164 3300006931 Ga0097620_100002624 Ga0097620_1000026246 428
165 3300007076 Ga0075435_100048419 Ga0075435_1000484193 428
166 3300009094 Ga0111539_10003393 Ga0111539_100033939 428
167 3300009177 Ga0105248_10032750 Ga0105248_100327505 428
168 3300009553 Ga0105249_10002900 Ga0105249_1000290011 428
169 3300014325 Ga0163163_10014522 Ga0163163_100145221 428
170 3300014326 Ga0157380_10008547 Ga0157380_100085474 428
171 3300014326 Ga0157380_10030636 Ga0157380_100306362 428
172 3300025901 Ga0207688_10049575 Ga0207688_100495752 428
173 3300025908 Ga0207643_10034369 Ga0207643_100343691 428
174 3300025918 Ga0207662_10049124 Ga0207662_100491242 428
175 3300025928 Ga0207700_10058832 Ga0207700_100588322 428
176 3300025933 Ga0207706_10028583 Ga0207706_100285834 428
177 3300025934 Ga0207686_10069325 Ga0207686_100693251 428
178 3300025937 Ga0207669_10033079 Ga0207669_100330791 428
179 3300025938 Ga0207704_10066490 Ga0207704_100664901 428
180 3300025938 Ga0207704_10102113 Ga0207704_101021132 428
181 3300025940 Ga0207691_10139800 Ga0207691_101398003 428
182 3300025942 Ga0207689_10012579 Ga0207689_100125792 428
183 3300025942 Ga0207689_10093846 Ga0207689_100938462 428
184 3300025945 Ga0207679_10036706 Ga0207679_100367062 428
185 3300025960 Ga0207651_10001979 Ga0207651_100019796 428
186 3300025961 Ga0207712_10005341 Ga0207712_100053412 428
187 3300025986 Ga0207658_10119063 Ga0207658_101190632 428
188 3300026075 Ga0207708_10023593 Ga0207708_100235934 428
189 3300026088 Ga0207641_10008156 Ga0207641_100081562 428
190 3300026089 Ga0207648_10025316 Ga0207648_100253162 428
191 3300026095 Ga0207676_10007896 Ga0207676_100078966 428
192 3300026116 Ga0207674_10114459 Ga0207674_101144593 428
193 3300026118 Ga0207675_100013288 Ga0207675_1000132885 428
194 3300026118 Ga0207675_100151498 Ga0207675_1001514982 428
195 3300027907 Ga0207428_10037391 Ga0207428_100373914 428
196 3300031901 Ga0307406_10007367 Ga0307406_100073672 428
197 3300031995 Ga0307409_100031491 Ga0307409_1000314912 428
198 3300032002 Ga0307416_100110509 Ga0307416_1001105092 428
199 3300041410 Ga0439461_0000411 Ga0439461_0000411_2181_3518 428
200 3300042001 Ga0439441_003891 Ga0439441_003891_177_1514 428
201 3300042122 Ga0450920_002937 Ga0450920_002937_1533_2870 428
202 3300042124 Ga0450922_002281 Ga0450922_002281_68_1405 428
203 3300042125 Ga0450923_000210 Ga0450923_000210_3619_4956 428
204 3300042134 Ga0450898_001995 Ga0450898_001995_449_1786 428
205 3300042156 Ga0439446_0000379 Ga0439446_0000379_2102_3439 428
206 3300042156 Ga0439446_0009831 Ga0439446_0009831_1018_2355 428
207 3300042184 Ga0450908_006969 Ga0450908_006969_397_1734 428
208 3300042435 Ga0439434_0001027 Ga0439434_0001027_1368_2705 428
209 3300042436 Ga0439435_0000513 Ga0439435_0000513_882_2219 428
210 3300042437 Ga0439444_0000603 Ga0439444_0000603_2350_3687 428
211 3300042461 Ga0439460_0002889 Ga0439460_0002889_96_1433 428
212 3300045051 Ga0451576_0014640 Ga0451576_0014640_4766_6103 428
213 3300048911 Ga0496108_0275380 Ga0496108_0275380_76_1413 428
214 3300048912 Ga0496109_0106202 Ga0496109_0106202_1122_2459 428
215 3300048915 Ga0496112_0131159 Ga0496112_0131159_825_2162 428
216 3300049569 Ga0501032_0023413 Ga0501032_0023413_1945_3282 428
217 3300049575 Ga0501039_0007955 Ga0501039_0007955_163_1500 428
218 3300049576 Ga0501040_0089777 Ga0501040_0089777_571_1908 428
219 3300049577 Ga0501041_0079704 Ga0501041_0079704_593_1930 428
220 3300049580 Ga0501046_0144445 Ga0501046_0144445_61_1398 428
221 3300049582 Ga0501048_0116636 Ga0501048_0116636_438_1775 428
222 3300049584 Ga0501068_0012999 Ga0501068_0012999_3193_4530 428
223 3300049587 Ga0501071_0004121 Ga0501071_0004121_1440_2777 428
224 3300049587 Ga0501071_0010169 Ga0501071_0010169_2386_3723 428
225 3300049588 Ga0501072_0179102 Ga0501072_0179102_101_1438 428
226 3300049591 Ga0501075_0171939 Ga0501075_0171939_239_1576 428
227 3300049592 Ga0501076_0007140 Ga0501076_0007140_6328_7665 428
228 3300049741 Ga0501079_0053215 Ga0501079_0053215_1657_2994 428
229 3300049743 Ga0501081_0021124 Ga0501081_0021124_740_2077 428
230 3300049743 Ga0501081_0094711 Ga0501081_0094711_607_1944 428
231 3300049743 Ga0501081_0216031 Ga0501081_0216031_25_1362 428
232 3300049822 Ga0501035_0063407 Ga0501035_0063407_1363_2700 428
233 3300050511 nmdc:mga08y16_57970_c1 nmdc:mga08y16_57970_c1_147_1484 428
234 3300050513 nmdc:mga0rr50_16584_c1 nmdc:mga0rr50_16584_c1_1839_3176 428
235 3300061734 Ga0530510_0014407 Ga0530510_0014407_3311_4648 428
236 3300006881 Ga0068865_100091116 Ga0068865_1000911162 429
237 3300014969 Ga0157376_10021741 Ga0157376_100217412 429
238 3300026121 Ga0207683_10006223 Ga0207683_100062232 429
239 3300031728 Ga0316578_10083720 Ga0316578_100837202 429
240 3300035398 Ga0316574_0001720 Ga0316574_0001720_8873_10213 429
241 3300035398 Ga0316574_0004089 Ga0316574_0004089_4062_5402 429
242 3300048919 Ga0496116_0000008 Ga0496116_0000008_431353_432696 429
243 3300048924 Ga0496121_0000012 Ga0496121_0000012_283056_284399 429
244 3300049574 Ga0501038_0090831 Ga0501038_0090831_82_1434 429
245 3300049581 Ga0501047_0029844 Ga0501047_0029844_3289_4641 429
246 3300049590 Ga0501074_0053019 Ga0501074_0053019_208_1545 429
247 3300049823 Ga0501044_0000033 Ga0501044_0000033_9966_11318 429
248 iso_pu_bacteria 2510065053 2510282737 429
249 iso_pu_bacteria 2510065055 2510295393 429
250 iso_pu_bacteria 2510065058 2510310983 429
251 3300009098 Ga0105245_10248767 Ga0105245_102487672 430
252 3300025906 Ga0207699_10121747 Ga0207699_101217472 430
253 3300025927 Ga0207687_10143772 Ga0207687_101437721 430
254 3300028573 Ga0265334_10000021 Ga0265334_10000021115 430
255 3300028800 Ga0265338_10012909 Ga0265338_100129098 430
256 3300031595 Ga0265313_10000926 Ga0265313_1000092610 430
257 3300036712 Ga0316584_0042410 Ga0316584_0042410_60_1412 430
258 3300049586 Ga0501070_0025580 Ga0501070_0025580_738_2078 430
259 iso_pu_bacteria 2773857672 2774129225 430
260 iso_pu_bacteria 2917832318 2917833340 430
261 iso_pu_bacteria 2919125081 2919126120 430
262 iso_pu_bacteria 2974298342 2974302337 430
263 iso_pu_bacteria 2984499530 2984500109 430
264 iso_pu_bacteria 2984504281 2984506519 430
265 iso_pu_bacteria 8016728285 8016731470 430
266 3300005353 Ga0070669_100005461 Ga0070669_1000054612 431
267 3300005444 Ga0070694_100049006 Ga0070694_1000490062 431
268 3300005458 Ga0070681_10240319 Ga0070681_102403192 431
269 3300005563 Ga0068855_100039261 Ga0068855_1000392612 431
270 3300005719 Ga0068861_100026114 Ga0068861_1000261141 431
271 3300005844 Ga0068862_100010158 Ga0068862_1000101585 431
272 3300005844 Ga0068862_100127636 Ga0068862_1001276362 431
273 3300006844 Ga0075428_100081010 Ga0075428_1000810103 431
274 3300006846 Ga0075430_100166955 Ga0075430_1001669552 431
275 3300006871 Ga0075434_100043932 Ga0075434_1000439323 431
276 3300006880 Ga0075429_100031001 Ga0075429_1000310014 431
277 3300006914 Ga0075436_100002777 Ga0075436_10000277713 431
278 3300007076 Ga0075435_100035270 Ga0075435_1000352702 431
279 3300009094 Ga0111539_10209606 Ga0111539_102096062 431
280 3300009094 Ga0111539_10240697 Ga0111539_102406971 431
281 3300009147 Ga0114129_10037673 Ga0114129_100376734 431
282 3300009553 Ga0105249_10005580 Ga0105249_1000558013 431
283 3300025907 Ga0207645_10021877 Ga0207645_100218772 431
284 3300025916 Ga0207663_10009563 Ga0207663_100095633 431
285 3300025949 Ga0207667_10094814 Ga0207667_100948142 431
286 3300025961 Ga0207712_10020637 Ga0207712_100206372 431
287 3300025972 Ga0207668_10045892 Ga0207668_100458923 431
288 3300026118 Ga0207675_100008823 Ga0207675_1000088234 431
289 3300027907 Ga0207428_10125672 Ga0207428_101256721 431
290 3300028380 Ga0268265_10005164 Ga0268265_100051645 431
291 3300028380 Ga0268265_10147576 Ga0268265_101475762 431
292 3300031548 Ga0307408_100058267 Ga0307408_1000582671 431
293 3300032002 Ga0307416_100143835 Ga0307416_1001438352 431
294 3300035398 Ga0316574_0063555 Ga0316574_0063555_486_1829 431
295 3300045051 Ga0451576_0000929 Ga0451576_0000929_47962_49308 431
296 3300050507 nmdc:mga05p37_215434_c1 nmdc:mga05p37_215434_c1_293_1696 431
297 3300050508 nmdc:mga09592_193477_c1 nmdc:mga09592_193477_c1_242_1594 431
298 3300050509 nmdc:mga0qj67_74443_c1 nmdc:mga0qj67_74443_c1_1195_2547 431
299 3300050510 nmdc:mga06r32_17138_c1 nmdc:mga06r32_17138_c1_86_1489 431
300 3300050510 nmdc:mga06r32_37_c1 nmdc:mga06r32_37_c1_55896_57248 431
301 3300050511 nmdc:mga08y16_24661_c1 nmdc:mga08y16_24661_c1_3746_5098 431
302 3300050511 nmdc:mga08y16_36661_c1 nmdc:mga08y16_36661_c1_3319_4671 431
303 3300050514 nmdc:mga08x19_61437_c1 nmdc:mga08x19_61437_c1_597_1988 431
304 3300032168 Ga0316593_10012174 Ga0316593_100121742 432
305 3300035695 Ga0373927_0000001 Ga0373927_0000001_145480_146829 432
306 3300044712 Ga0453684_0011750 Ga0453684_0011750_2689_4038 432
307 3300044712 Ga0453684_0353764 Ga0453684_0353764_120_1469 432
308 3300005295 Ga0065707_10083751 Ga0065707_100837517 433
309 3300005336 Ga0070680_100079152 Ga0070680_1000791522 433
310 3300005356 Ga0070674_100174086 Ga0070674_1001740862 433
311 3300005719 Ga0068861_100037102 Ga0068861_1000371022 433
312 3300006844 Ga0075428_100018809 Ga0075428_1000188092 433
313 3300006844 Ga0075428_100025934 Ga0075428_1000259342 433
314 3300006844 Ga0075428_100294889 Ga0075428_1002948892 433
315 3300006847 Ga0075431_100000328 Ga0075431_10000032839 433
316 3300006847 Ga0075431_100008916 Ga0075431_1000089164 433
317 3300009094 Ga0111539_10001858 Ga0111539_100018582 433
318 3300009101 Ga0105247_10015997 Ga0105247_100159973 433
319 3300025907 Ga0207645_10021941 Ga0207645_100219412 433
320 3300025923 Ga0207681_10010249 Ga0207681_100102495 433
321 3300025933 Ga0207706_10037103 Ga0207706_100371033 433
322 3300025938 Ga0207704_10112579 Ga0207704_101125791 433
323 3300026089 Ga0207648_10000544 Ga0207648_100005443 433
324 3300026118 Ga0207675_100083925 Ga0207675_1000839252 433
325 3300027614 Ga0209970_1005694 Ga0209970_10056942 433
326 3300027665 Ga0209983_1007047 Ga0209983_10070471 433
327 3300027682 Ga0209971_1001314 Ga0209971_10013142 433
328 3300027876 Ga0209974_10000585 Ga0209974_100005855 433
329 3300027907 Ga0207428_10096508 Ga0207428_100965082 433
330 3300028380 Ga0268265_10045238 Ga0268265_100452382 433
331 3300031507 Ga0307509_10000303 Ga0307509_100003037 433
332 3300031727 Ga0316576_10000419 Ga0316576_1000041913 433
333 3300031728 Ga0316578_10003517 Ga0316578_100035171 433
334 3300031733 Ga0316577_10027932 Ga0316577_100279321 433
335 3300035398 Ga0316574_0023013 Ga0316574_0023013_2092_3447 433
336 3300036647 Ga0316582_0028103 Ga0316582_0028103_1401_2762 433
337 3300045051 Ga0451576_0265331 Ga0451576_0265331_220_1581 433
338 3300046460 Ga0495638_0002174 Ga0495638_0002174_13853_15217 433
339 3300046460 Ga0495638_0019916 Ga0495638_0019916_28_1389 433
340 3300046660 Ga0495625_0002392 Ga0495625_0002392_13571_14935 433
341 3300048921 Ga0496118_0063998 Ga0496118_0063998_282_1646 433
342 3300049571 Ga0501034_0196454 Ga0501034_0196454_194_1552 433
343 3300050507 nmdc:mga05p37_80284_c1 nmdc:mga05p37_80284_c1_2377_3738 433
344 3300050510 nmdc:mga06r32_122987_c1 nmdc:mga06r32_122987_c1_270_1784 433
345 3300050511 nmdc:mga08y16_187073_c1 nmdc:mga08y16_187073_c1_341_1702 433
346 3300053156 Ga0500622_0008923 Ga0500622_0008923_1564_2925 433
347 3300031852 Ga0307410_10034340 Ga0307410_100343402 434
348 3300005289 Ga0065704_10082922 Ga0065704_100829223 435
349 3300042876 Ga0451577_0029209 Ga0451577_0029209_3550_4911 435
350 3300042876 Ga0451577_0158399 Ga0451577_0158399_326_1687 435
351 3300045051 Ga0451576_0354340 Ga0451576_0354340_153_1526 435

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12631

MnmE_helical

MnmE helical domain

120

430

0.97

PF10396

TrmE_N

GTP-binding protein TrmE N-terminus

4

117

0.95

PF02421

FeoB_N

Ferrous iron transport protein B

214

341

0.93

PF01926

MMR_HSR1

50S ribosome-binding GTPase

215

328

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
1xzq-assembly1.cif.gz_B structure of the gtp-binding protein trme from thermotoga maritima complexed with 5-formyl-thf 0.9503 6 118
1xzp-assembly1.cif.gz_B structure of the gtp-binding protein trme from thermotoga maritima 0.9126 1 121
1xzq-assembly1.cif.gz_B structure of the gtp-binding protein trme from thermotoga maritima complexed with 5-formyl-thf 0.9109 6 118
2gja-assembly1.cif.gz_A structure of the mnme g-domain in complex with gdp*alf4-, mg2+ and nh4+ 0.8678 216 380
2gja-assembly1.cif.gz_A structure of the mnme g-domain in complex with gdp*alf4-, mg2+ and nh4+ 0.8486 216 380
ID Description Score Start End Superfamily
af_P25522_1_121_3.30.1360.120 Alpha Beta;2-Layer Sandwich;Gyrase A; domain 2;Probable tRNA modification gtpase trme; domain 1 0.9914 4 121 3.30.1360.120
af_Q923K4_29_152_3.30.1360.120 Alpha Beta;2-Layer Sandwich;Gyrase A; domain 2;Probable tRNA modification gtpase trme; domain 1 0.9706 1 119 3.30.1360.120
af_I1JVH7_75_204_3.30.1360.120 Alpha Beta;2-Layer Sandwich;Gyrase A; domain 2;Probable tRNA modification gtpase trme; domain 1 0.9688 6 118 3.30.1360.120
af_Q9UTE7_14_142_3.30.1360.120 Alpha Beta;2-Layer Sandwich;Gyrase A; domain 2;Probable tRNA modification gtpase trme; domain 1 0.9668 3 119 3.30.1360.120
af_Q9XTZ1_1_119_3.30.1360.120 Alpha Beta;2-Layer Sandwich;Gyrase A; domain 2;Probable tRNA modification gtpase trme; domain 1 0.9646 6 121 3.30.1360.120
ID Description Score Start End GO Terms
AF-A0A4V1UG93-F1-model_v4 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.9877 5 137 GO:0002098
GO:0005525
GO:0005737
GO:0030488
AF-A0A6L3XY89-F1-model_v4 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.986 4 146 GO:0002098
GO:0005525
GO:0005829
GO:0030488
AF-A0A382RDK5-F1-model_v4 GTP-binding protein TrmE N-terminal domain-containing protein 0.9857 1 138 GO:0002098
GO:0005525
GO:0005829
GO:0030488
AF-A0A014DS15-F1-model_v4 deleted 0.9837 4 142
AF-A0A521Y2T2-F1-model_v4 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.9822 1 171 GO:0002098
GO:0005525
GO:0005829
GO:0030488

Feature Viewer

pLDDT pTM Quality
79.86 0.69 Medium
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Predicted Structure (AlphaFold2)

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