F416814

General Info

Members Datasets Scaffolds Average Seq Length
346 205 341 310

Family's Representative Sequence

Representative Sequence 3300031824|Ga0307413_10025013|Ga0307413_100250132
Length 331
Sequence MIELAAQDPTVRLIILLGLFGLVAGLSLLGLFYANRRLAVRGQLGRLVPKSIMLGERIGGGQTESLRTREAQTAWSRLAEAVERAGLNLTDTKSERLTGLLRQAGYTSPSAPRVFTLVRLGMIFALPVIYVIIAFSGDDPPSFLRVYLIGSALALLGLYLPNLYVQARADRRKEAIINGFPDCLDLMLVCVESGLGLEAAMDRVGREMVNSHPLVAQLLMITVLQLRAGSTRDEAFRKLAEASAVDEIRAFTTLIIQSDKLGTSVATTLRVYAAEMRERRQMRAEEKAHRLPVLISIPLVACMLPTMIGTLMLPAAVLMVRKIFPMMTGGG

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2775507255 Sphingobium indicum B90A Isolate Rhizosphere
3 2818991438 Novosphingobium barchaimii 1192 Isolate Unclassified
4 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
5 2896253425 Aurantiacibacter rhizosphaerae GH3-10 Isolate Rhizosphere
6 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
7 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
8 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
9 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
10 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
11 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
12 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
13 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
14 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
15 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
16 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
17 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
18 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
19 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
20 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
21 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
22 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
23 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
24 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
25 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
26 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
27 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
28 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
29 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
30 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
31 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
32 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
33 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
34 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
35 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
36 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
37 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
38 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
39 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
40 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
41 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
42 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
43 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
44 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
45 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
46 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
47 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
48 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
49 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
50 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
51 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
52 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
53 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
54 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
55 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
56 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
57 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
58 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
59 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
61 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
62 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
63 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
64 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
65 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
66 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
67 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
68 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
69 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
70 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
71 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
72 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
73 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
74 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
75 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
76 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
77 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
78 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
79 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
80 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
81 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
82 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
83 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
84 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
85 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
125 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
126 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
130 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
131 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
132 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
133 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
134 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
135 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
136 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
137 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
138 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
139 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
140 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
141 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
142 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
143 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
144 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
145 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
146 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
147 3300039145 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JP6-T1 Metagenome Unclassified
148 3300042116 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126F_E14_082316_1792 Metagenome Rhizosphere
149 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
150 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
151 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
152 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
153 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
154 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
155 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
156 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
157 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
158 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
159 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
160 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
161 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
162 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
163 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
164 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
165 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
166 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
167 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
168 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
169 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
170 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
171 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
172 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
173 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
174 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
175 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
176 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
177 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
178 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
179 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
180 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
181 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
182 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
183 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
184 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
185 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
186 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
187 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
188 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
189 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
190 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
191 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
192 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
193 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
194 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
195 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
196 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
197 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
198 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
199 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
200 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
201 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
202 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
203 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
204 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
205 8057101203 Sphingomonas lycopersici MMSM20 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.55
Metatranscriptomes 0
Isolates 1.45

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.98
Nodule 0
Rhizoplane 6.65
Rhizosphere 76.59
Stem 0
Stem Tuber 0
Unclassified 5.78

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_37157 2162886007 Bacteria 6876
2 JGI24741J21665_1002416 3300001915 Bacteria 4852
3 JGI24740J21852_10006300 3300001979 Bacteria 4926
4 JGI24739J22299_10033941 3300001989 Bacteria 1741
5 JGI24737J22298_10004845 3300001990 Bacteria 4669
6 JGI24738J21930_10010261 3300002075 Bacteria 2087
7 Ga0055536_1000566 3300003781 Bacteria 25281
8 Ga0055530_10012874 3300003791 Bacteria 2891
9 Ga0065704_10002074 3300005289 Bacteria 6144
10 Ga0065704_10075037 3300005289 Bacteria 5829
11 Ga0065707_10088792 3300005295 Bacteria 4549
12 Ga0065707_10135688 3300005295 Bacteria 1845
13 Ga0070658_10000880 3300005327 Bacteria 25702
14 Ga0070658_10224302 3300005327 Bacteria 1590
15 Ga0070676_10099337 3300005328 Bacteria 1796
16 Ga0070683_100046884 3300005329 Bacteria 3994
17 Ga0068869_100276232 3300005334 Bacteria 1350
18 Ga0070666_10002047 3300005335 Bacteria 12245
19 Ga0070660_100228901 3300005339 Bacteria 1512
20 Ga0070661_100006727 3300005344 Bacteria 7927
21 Ga0070692_10113691 3300005345 Bacteria 1501
22 Ga0070668_100000431 3300005347 Bacteria 27697
23 Ga0070668_100046403 3300005347 Bacteria 3336
24 Ga0070668_100155715 3300005347 Bacteria 1851
25 Ga0070669_100000226 3300005353 Bacteria 46992
26 Ga0070669_100035780 3300005353 Bacteria 3598
27 Ga0070675_100238409 3300005354 Bacteria 1588
28 Ga0070671_100174306 3300005355 Bacteria 1819
29 Ga0070674_100034704 3300005356 Bacteria 3372
30 Ga0070673_100004485 3300005364 Bacteria 8833
31 Ga0070659_100007726 3300005366 Bacteria 7817
32 Ga0070659_100022870 3300005366 Bacteria 4776
33 Ga0070659_100036185 3300005366 Bacteria 3847
34 Ga0070659_100088090 3300005366 Bacteria 2486
35 Ga0070659_100301147 3300005366 Unclassified 1337
36 Ga0070667_100016953 3300005367 Bacteria 6029
37 Ga0070667_100077381 3300005367 Bacteria 2841
38 Ga0070667_100371656 3300005367 Bacteria 1297
39 Ga0070663_100005623 3300005455 Bacteria 7463
40 Ga0070678_100033080 3300005456 Bacteria 3586
41 Ga0070662_100002095 3300005457 Bacteria 12228
42 Ga0070662_100008822 3300005457 Bacteria 6572
43 Ga0070662_100302823 3300005457 Bacteria 1299
44 Ga0070681_10283804 3300005458 Bacteria 1566
45 Ga0070685_10168404 3300005466 Bacteria 1402
46 Ga0068853_100052418 3300005539 Bacteria 3515
47 Ga0068853_100290888 3300005539 Bacteria 1508
48 Ga0070696_100166553 3300005546 Bacteria 1627
49 Ga0070693_100177376 3300005547 Bacteria 1369
50 Ga0070665_100002737 3300005548 Bacteria 19094
51 Ga0068855_100005354 3300005563 Bacteria 15653
52 Ga0068855_100008073 3300005563 Bacteria 12719
53 Ga0068855_100026337 3300005563 Bacteria 6956
54 Ga0068855_100079954 3300005563 Bacteria 3791
55 Ga0068855_100364171 3300005563 Bacteria 1590
56 Ga0070664_100048566 3300005564 Bacteria 3586
57 Ga0070664_100176976 3300005564 Bacteria 1894
58 Ga0068857_100011994 3300005577 Bacteria 7538
59 Ga0068857_100018898 3300005577 Bacteria 6047
60 Ga0068856_100004363 3300005614 Bacteria 14093
61 Ga0068856_100085562 3300005614 Bacteria 3132
62 Ga0068852_100213893 3300005616 Bacteria 1830
63 Ga0068852_100483914 3300005616 Bacteria 1230
64 Ga0068859_100018537 3300005617 Bacteria 6994
65 Ga0068859_100118875 3300005617 Bacteria 2708
66 Ga0068859_100186363 3300005617 Bacteria 2159
67 Ga0068864_100010801 3300005618 Bacteria 7547
68 Ga0068864_100043352 3300005618 Bacteria 3853
69 Ga0068866_10154528 3300005718 Bacteria 1332
70 Ga0068863_100145772 3300005841 Bacteria 2264
71 Ga0068858_100005088 3300005842 Bacteria 12885
72 Ga0068858_100542178 3300005842 Bacteria 1126
73 Ga0068860_100004347 3300005843 Bacteria 14478
74 Ga0068860_100012805 3300005843 Bacteria 8246
75 Ga0068860_100048782 3300005843 Bacteria 4035
76 Ga0068862_100007450 3300005844 Bacteria 9072
77 Ga0081539_10007294 3300005985 Bacteria 10149
78 Ga0075364_10000590 3300006051 Bacteria 18745
79 Ga0075364_10100934 3300006051 Bacteria 1921
80 Ga0075432_10003875 3300006058 Bacteria 5097
81 Ga0075362_10000008 3300006177 Bacteria 112391
82 Ga0075367_10024869 3300006178 Bacteria 3380
83 Ga0075369_10001040 3300006186 Bacteria 9272
84 Ga0075369_10011739 3300006186 Bacteria 3450
85 Ga0075366_10000016 3300006195 Bacteria 64473
86 Ga0075366_10084458 3300006195 Bacteria 1898
87 Ga0097621_100007477 3300006237 Bacteria 7817
88 Ga0097621_100049835 3300006237 Bacteria 3404
89 Ga0097621_100137884 3300006237 Bacteria 2082
90 Ga0075370_10000018 3300006353 Bacteria 59800
91 Ga0075370_10000409 3300006353 Bacteria 15870
92 Ga0075370_10044278 3300006353 Bacteria 2516
93 Ga0075370_10055249 3300006353 Unclassified 2256
94 Ga0068871_100008165 3300006358 Bacteria 7521
95 Ga0075430_100012247 3300006846 Bacteria 7298
96 Ga0068865_100167227 3300006881 Bacteria 1682
97 Ga0097620_100018538 3300006931 Bacteria 6994
98 Ga0097620_100118878 3300006931 Bacteria 2708
99 Ga0097620_100186360 3300006931 Bacteria 2159
100 Ga0105251_10008696 3300009011 Bacteria 6088
101 Ga0105240_10300228 3300009093 Bacteria 1837
102 Ga0111539_10052625 3300009094 Bacteria 4847
103 Ga0111539_10288858 3300009094 Bacteria 1908
104 Ga0105247_10200962 3300009101 Bacteria 1339
105 Ga0105243_10040186 3300009148 Bacteria 3651
106 Ga0105241_10008072 3300009174 Bacteria 7745
107 Ga0105248_10021318 3300009177 Bacteria 7180
108 Ga0105248_10045151 3300009177 Bacteria 4941
109 Ga0105248_10054430 3300009177 Bacteria 4487
110 Ga0105248_10604690 3300009177 Bacteria 1237
111 Ga0105237_10093798 3300009545 Bacteria 2991
112 Ga0105237_10385268 3300009545 Bacteria 1407
113 Ga0105249_10101365 3300009553 Bacteria 2708
114 Ga0105239_10043294 3300010375 Bacteria 4934
115 Ga0105239_10226084 3300010375 Bacteria 2099
116 Ga0105246_10000072 3300011119 Bacteria 41904
117 Ga0157370_10075285 3300013104 Bacteria 3183
118 Ga0157370_10125673 3300013104 Bacteria 2393
119 Ga0157370_10195540 3300013104 Bacteria 1877
120 Ga0157369_10008210 3300013105 Bacteria 11974
121 Ga0157369_10336168 3300013105 Bacteria 1569
122 Ga0157374_10255291 3300013296 Bacteria 1726
123 Ga0163162_10007724 3300013306 Bacteria 10479
124 Ga0163162_10076924 3300013306 Bacteria 3400
125 Ga0163162_10210996 3300013306 Bacteria 2072
126 Ga0157372_10090608 3300013307 Bacteria 3477
127 Ga0157372_10095292 3300013307 Bacteria 3391
128 Ga0157375_10041958 3300013308 Bacteria 4423
129 Ga0163163_10111163 3300014325 Bacteria 2769
130 Ga0157379_10010859 3300014968 Bacteria 7939
131 Ga0163161_10033410 3300017792 Bacteria 3676
132 Ga0209676_1000155 3300025292 Bacteria 165151
133 Ga0209050_1003883 3300025298 Bacteria 10619
134 Ga0209050_1009805 3300025298 Bacteria 4826
135 Ga0207688_10160548 3300025901 Bacteria 1332
136 Ga0207680_10002450 3300025903 Bacteria 8655
137 Ga0207680_10051992 3300025903 Bacteria 2452
138 Ga0207647_10124822 3300025904 Bacteria 1516
139 Ga0207645_10004885 3300025907 Bacteria 9831
140 Ga0207643_10038255 3300025908 Bacteria 2694
141 Ga0207705_10000404 3300025909 Bacteria 37967
142 Ga0207705_10049616 3300025909 Bacteria 3021
143 Ga0207705_10248400 3300025909 Bacteria 1356
144 Ga0207707_10326368 3300025912 Bacteria 1324
145 Ga0207671_10029228 3300025914 Bacteria 4117
146 Ga0207660_10112623 3300025917 Bacteria 2050
147 Ga0207657_10000281 3300025919 Bacteria 54261
148 Ga0207657_10027695 3300025919 Bacteria 5186
149 Ga0207649_10004657 3300025920 Bacteria 7424
150 Ga0207649_10288241 3300025920 Bacteria 1196
151 Ga0207652_10502759 3300025921 Bacteria 1091
152 Ga0207681_10000092 3300025923 Bacteria 77024
153 Ga0207681_10017187 3300025923 Bacteria 4538
154 Ga0207694_10028224 3300025924 Bacteria 4278
155 Ga0207644_10068679 3300025931 Bacteria 2586
156 Ga0207690_10047615 3300025932 Bacteria 2846
157 Ga0207690_10247325 3300025932 Unclassified 1376
158 Ga0207706_10001541 3300025933 Bacteria 22819
159 Ga0207706_10005611 3300025933 Bacteria 11690
160 Ga0207706_10257888 3300025933 Bacteria 1522
161 Ga0207709_10171364 3300025935 Bacteria 1523
162 Ga0207711_10241554 3300025941 Bacteria 1656
163 Ga0207711_10300674 3300025941 Bacteria 1480
164 Ga0207689_10054178 3300025942 Bacteria 3304
165 Ga0207679_10390831 3300025945 Bacteria 1221
166 Ga0207679_10411785 3300025945 Bacteria 1191
167 Ga0207667_10005425 3300025949 Bacteria 15550
168 Ga0207667_10013829 3300025949 Bacteria 9220
169 Ga0207667_10018354 3300025949 Bacteria 7849
170 Ga0207667_10058035 3300025949 Bacteria 4061
171 Ga0207651_10009168 3300025960 Bacteria 5394
172 Ga0207712_10059299 3300025961 Bacteria 2708
173 Ga0207712_10098495 3300025961 Bacteria 2168
174 Ga0207668_10000254 3300025972 Bacteria 35626
175 Ga0207668_10098414 3300025972 Bacteria 2167
176 Ga0207640_10041424 3300025981 Bacteria 2929
177 Ga0207658_10003499 3300025986 Bacteria 11079
178 Ga0207658_10007394 3300025986 Bacteria 7489
179 Ga0207658_10067538 3300025986 Bacteria 2694
180 Ga0207658_10213165 3300025986 Unclassified 1620
181 Ga0207703_10001348 3300026035 Bacteria 22467
182 Ga0207703_10292976 3300026035 Bacteria 1482
183 Ga0207639_10038110 3300026041 Bacteria 3574
184 Ga0207678_10001799 3300026067 Bacteria 19627
185 Ga0207702_10002022 3300026078 Bacteria 19645
186 Ga0207702_10051826 3300026078 Bacteria 3470
187 Ga0207641_10039563 3300026088 Bacteria 3944
188 Ga0207641_10380152 3300026088 Bacteria 1352
189 Ga0207648_10006490 3300026089 Bacteria 11616
190 Ga0207676_10054440 3300026095 Bacteria 3136
191 Ga0207674_10001303 3300026116 Bacteria 32594
192 Ga0207674_10009638 3300026116 Bacteria 11016
193 Ga0207674_10033199 3300026116 Bacteria 5404
194 Ga0207683_10045029 3300026121 Bacteria 3858
195 Ga0207698_10007078 3300026142 Bacteria 7026
196 Ga0207698_10310662 3300026142 Bacteria 1472
197 Ga0209974_10002423 3300027876 Bacteria 6759
198 Ga0207428_10103462 3300027907 Bacteria 2198
199 Ga0268266_10022449 3300028379 Bacteria 5378
200 Ga0268266_10197444 3300028379 Bacteria 1840
201 Ga0268265_10001225 3300028380 Bacteria 22248
202 Ga0268264_10019681 3300028381 Bacteria 5514
203 Ga0268264_10035913 3300028381 Bacteria 4081
204 Ga0268264_10042652 3300028381 Bacteria 3756
205 Ga0268264_10271876 3300028381 Bacteria 1583
206 Ga0307408_100013243 3300031548 Bacteria 5473
207 Ga0307408_100065324 3300031548 Bacteria 2668
208 Ga0307408_100266787 3300031548 Bacteria 1419
209 Ga0307408_100383842 3300031548 Bacteria 1201
210 Ga0307408_100445520 3300031548 Bacteria 1122
211 Ga0307405_10008126 3300031731 Bacteria 5300
212 Ga0307405_10011970 3300031731 Bacteria 4570
213 Ga0307405_10015778 3300031731 Bacteria 4100
214 Ga0307405_10078541 3300031731 Bacteria 2148
215 Ga0307405_10253598 3300031731 Bacteria 1310
216 Ga0307405_10261173 3300031731 Bacteria 1293
217 Ga0307413_10025013 3300031824 Bacteria 3265
218 Ga0307413_10064658 3300031824 Bacteria 2274
219 Ga0307413_10180812 3300031824 Bacteria 1503
220 Ga0307410_10010015 3300031852 Bacteria 5348
221 Ga0307410_10015066 3300031852 Bacteria 4574
222 Ga0307410_10037812 3300031852 Bacteria 3156
223 Ga0307406_10035149 3300031901 Bacteria 3079
224 Ga0307407_10041898 3300031903 Bacteria 2563
225 Ga0307407_10280323 3300031903 Bacteria 1154
226 Ga0307412_10012417 3300031911 Bacteria 4966
227 Ga0307412_10014322 3300031911 Bacteria 4673
228 Ga0307412_10053605 3300031911 Bacteria 2674
229 Ga0307412_10054114 3300031911 Bacteria 2663
230 Ga0307412_10093621 3300031911 Bacteria 2108
231 Ga0307412_10138949 3300031911 Bacteria 1776
232 Ga0307409_100013852 3300031995 Bacteria 5214
233 Ga0307409_100014320 3300031995 Bacteria 5152
234 Ga0307409_100147935 3300031995 Bacteria 2034
235 Ga0307416_100014784 3300032002 Bacteria 5364
236 Ga0307416_100106906 3300032002 Bacteria 2454
237 Ga0307416_100121167 3300032002 Bacteria 2331
238 Ga0307416_100481077 3300032002 Bacteria 1302
239 Ga0307414_10033961 3300032004 Bacteria 3376
240 Ga0307414_10062006 3300032004 Bacteria 2651
241 Ga0307414_10244193 3300032004 Bacteria 1488
242 Ga0307411_10023336 3300032005 Bacteria 3662
243 Ga0307411_10028107 3300032005 Bacteria 3415
244 Ga0307411_10030912 3300032005 Bacteria 3288
245 Ga0307411_10084625 3300032005 Bacteria 2194
246 Ga0307411_10140200 3300032005 Unclassified 1782
247 Ga0307411_10198965 3300032005 Bacteria 1537
248 Ga0307415_100026521 3300032126 Bacteria 3656
249 Ga0307415_100053547 3300032126 Bacteria 2750
250 Ga0307415_100155563 3300032126 Bacteria 1765
251 Ga0307415_100221779 3300032126 Bacteria 1516
252 Ga0373931_0055469 3300035691 Bacteria 2121
253 Ga0373947_0078094 3300035725 Bacteria 2043
254 Ga0395900_0002077 3300037418 Bacteria 22469
255 Ga0395900_0160592 3300037418 Bacteria 2292
256 Ga0395905_0025520 3300037471 Bacteria 5573
257 Ga0395905_0171167 3300037471 Bacteria 2040
258 Ga0395901_0000041 3300038443 Bacteria 202314
259 Ga0237819_04064 3300038705 Bacteria 2470
260 Ga0237816_00947 3300039145 Bacteria 2381
261 Ga0450912_000421 3300042116 Bacteria 2041
262 Ga0466963_0094741 3300044694 Bacteria 2037
263 Ga0453684_0224767 3300044712 Bacteria 2172
264 Ga0466957_0231501 3300044842 Bacteria 1223
265 Ga0466967_0041456 3300045976 Bacteria 3969
266 Ga0495617_058436 3300046452 Bacteria 1278
267 Ga0495583_0000254 3300046506 Bacteria 88390
268 Ga0495632_0000226 3300046519 Bacteria 57139
269 Ga0495643_0018156 3300046522 Bacteria 4095
270 Ga0495598_0016354 3300046537 Bacteria 1891
271 Ga0495633_0050415 3300046558 Bacteria 1963
272 Ga0495625_0003155 3300046660 Bacteria 16789
273 Ga0495671_0000023 3300046692 Bacteria 252939
274 Ga0495673_0000054 3300047469 Bacteria 252207
275 Ga0496100_0062953 3300048903 Bacteria 2450
276 Ga0496102_0058276 3300048905 Bacteria 3528
277 Ga0496103_0237596 3300048906 Bacteria 1172
278 Ga0496104_0077906 3300048907 Bacteria 3158
279 Ga0496104_0482941 3300048907 Bacteria 1150
280 Ga0496105_0290055 3300048908 Unclassified 1317
281 Ga0496106_0008340 3300048909 Bacteria 7670
282 Ga0496107_0005216 3300048910 Bacteria 8871
283 Ga0496107_0007356 3300048910 Bacteria 7594
284 Ga0496108_0002094 3300048911 Bacteria 15965
285 Ga0496108_0003258 3300048911 Bacteria 13051
286 Ga0496109_0040656 3300048912 Bacteria 4211
287 Ga0496110_0046405 3300048913 Bacteria 3801
288 Ga0496110_0074569 3300048913 Bacteria 3013
289 Ga0496111_0037397 3300048914 Bacteria 3474
290 Ga0496111_0080186 3300048914 Bacteria 2381
291 Ga0496112_0136925 3300048915 Bacteria 2418
292 Ga0496112_0147084 3300048915 Bacteria 2324
293 Ga0496113_0000355 3300048916 Bacteria 21953
294 Ga0496113_0012546 3300048916 Bacteria 5700
295 Ga0496114_0040714 3300048917 Bacteria 3848
296 Ga0496114_0375845 3300048917 Bacteria 1258
297 Ga0496115_0237561 3300048918 Bacteria 1502
298 Ga0496116_0038457 3300048919 Bacteria 3322
299 Ga0496121_0000175 3300048924 Bacteria 142910
300 Ga0496121_0001928 3300048924 Bacteria 33141
301 Ga0496122_0023956 3300048925 Bacteria 5359
302 Ga0496122_0024191 3300048925 Bacteria 5322
303 Ga0496123_0017873 3300048926 Bacteria 5679
304 Ga0496123_0052352 3300048926 Bacteria 2710
305 Ga0496124_0000579 3300048927 Bacteria 61788
306 Ga0496124_0005053 3300048927 Bacteria 15070
307 Ga0496124_0006227 3300048927 Bacteria 13070
308 Ga0496124_0167405 3300048927 Bacteria 1706
309 Ga0496124_0224109 3300048927 Bacteria 1411
310 Ga0496125_0000445 3300048928 Bacteria 75404
311 Ga0496125_0000587 3300048928 Bacteria 62037
312 Ga0496126_0003814 3300048929 Bacteria 18679
313 Ga0496126_0016112 3300048929 Bacteria 7489
314 Ga0501067_0172334 3300049583 Bacteria 1205
315 Ga0501068_0216166 3300049584 Bacteria 1218
316 Ga0501235_007158 3300049669 Bacteria 2432
317 Ga0501044_0000121 3300049823 Bacteria 93902
318 nmdc:mga03683_13776_c1 3300050489 Bacteria 2981
319 nmdc:mga03683_15_c1 3300050489 Bacteria 102058
320 nmdc:mga00v17_500_c1 3300050491 Bacteria 11904
321 nmdc:mga00v17_83321_c1 3300050491 Bacteria 2000
322 nmdc:mga0k408_21_c1 3300050493 Bacteria 107428
323 nmdc:mga06z11_15779_c1 3300050494 Bacteria 3381
324 nmdc:mga07m45_13_c2 3300050496 Bacteria 88503
325 nmdc:mga07m45_685_c1 3300050496 Bacteria 14392
326 nmdc:mga05p37_320285_c1 3300050507 Bacteria 1835
327 nmdc:mga0qj67_9760_c1 3300050509 Bacteria 7150
328 nmdc:mga0sz30_375_c1 3300050516 Bacteria 9277
329 nmdc:mga0sz30_5150_c2 3300050516 Bacteria 3563
330 Ga0500643_001267 3300053087 Bacteria 14940
331 Ga0500643_002517 3300053087 Bacteria 9383
332 Ga0500643_003576 3300053087 Bacteria 7393
333 Ga0500643_022647 3300053087 Bacteria 2019
334 Ga0500642_0030821 3300053130 Bacteria 2235
335 Ga0500655_000018 3300053133 Bacteria 45479
336 Ga0500577_0004476 3300053142 Bacteria 3698
337 Ga0500590_004222 3300053148 Bacteria 6747
338 Ga0500622_0012038 3300053156 Bacteria 4700
339 Ga0500639_005131 3300053163 Bacteria 6678
340 Ga0500570_000223 3300053724 Bacteria 18584
341 Ga0466962_0054724 3300061719 Bacteria 1907

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005367 Ga0070667_100371656 Ga0070667_1003716561 234
2 3300025986 Ga0207658_10213165 Ga0207658_102131651 234
3 3300009177 Ga0105248_10604690 Ga0105248_106046901 248
4 3300048906 Ga0496103_0237596 Ga0496103_0237596_35_841 248
5 3300046506 Ga0495583_0000254 Ga0495583_0000254_57326_58303 250
6 3300046558 Ga0495633_0050415 Ga0495633_0050415_378_1355 250
7 3300046692 Ga0495671_0000023 Ga0495671_0000023_30032_31009 250
8 3300047469 Ga0495673_0000054 Ga0495673_0000054_30020_30997 250
9 3300044842 Ga0466957_0231501 Ga0466957_0231501_355_1164 251
10 3300042116 Ga0450912_000421 Ga0450912_000421_586_1530 257
11 3300049669 Ga0501235_007158 Ga0501235_007158_1314_2285 261
12 3300005985 Ga0081539_10007294 Ga0081539_100072942 268
13 3300006846 Ga0075430_100012247 Ga0075430_1000122476 271
14 3300050509 nmdc:mga0qj67_9760_c1 nmdc:mga0qj67_9760_c1_4891_5859 271
15 3300031731 Ga0307405_10261173 Ga0307405_102611731 272
16 3300031824 Ga0307413_10064658 Ga0307413_100646582 272
17 3300031852 Ga0307410_10037812 Ga0307410_100378122 272
18 3300032004 Ga0307414_10062006 Ga0307414_100620062 272
19 3300032126 Ga0307415_100155563 Ga0307415_1001555632 275
20 3300049583 Ga0501067_0172334 Ga0501067_0172334_213_1193 275
21 3300049584 Ga0501068_0216166 Ga0501068_0216166_23_1003 275
22 3300003791 Ga0055530_10012874 Ga0055530_100128744 280
23 3300025298 Ga0209050_1003883 Ga0209050_10038836 280
24 3300031548 Ga0307408_100445520 Ga0307408_1004455202 282
25 3300046452 Ga0495617_058436 Ga0495617_058436_248_1222 282
26 3300046519 Ga0495632_0000226 Ga0495632_0000226_30193_31167 282
27 3300050507 nmdc:mga05p37_320285_c1 nmdc:mga05p37_320285_c1_87_1058 285
28 3300037418 Ga0395900_0160592 Ga0395900_0160592_751_1713 286
29 3300037471 Ga0395905_0025520 Ga0395905_0025520_3817_4779 286
30 3300053087 Ga0500643_003576 Ga0500643_003576_57_1031 287
31 3300031911 Ga0307412_10054114 Ga0307412_100541143 288
32 3300049823 Ga0501044_0000121 Ga0501044_0000121_29876_30850 288
33 3300005327 Ga0070658_10000880 Ga0070658_1000088012 289
34 3300025909 Ga0207705_10000404 Ga0207705_1000040412 289
35 3300053087 Ga0500643_002517 Ga0500643_002517_2433_3407 289
36 3300009148 Ga0105243_10040186 Ga0105243_100401862 290
37 3300025935 Ga0207709_10171364 Ga0207709_101713641 290
38 3300031824 Ga0307413_10180812 Ga0307413_101808122 290
39 3300032005 Ga0307411_10140200 Ga0307411_101402002 290
40 3300005335 Ga0070666_10002047 Ga0070666_100020478 291
41 3300013306 Ga0163162_10007724 Ga0163162_1000772415 291
42 3300025903 Ga0207680_10002450 Ga0207680_100024504 291
43 3300046537 Ga0495598_0016354 Ga0495598_0016354_194_1168 292
44 3300048917 Ga0496114_0040714 Ga0496114_0040714_1277_2248 293
45 3300048929 Ga0496126_0003814 Ga0496126_0003814_12379_13350 293
46 3300003781 Ga0055536_1000566 Ga0055536_10005662 294
47 3300006058 Ga0075432_10003875 Ga0075432_100038754 294
48 3300006195 Ga0075366_10084458 Ga0075366_100844582 294
49 3300006353 Ga0075370_10044278 Ga0075370_100442782 294
50 3300025292 Ga0209676_1000155 Ga0209676_100015596 294
51 3300025298 Ga0209050_1009805 Ga0209050_10098053 294
52 3300027907 Ga0207428_10103462 Ga0207428_101034622 294
53 3300006051 Ga0075364_10000590 Ga0075364_100005904 297
54 3300006186 Ga0075369_10011739 Ga0075369_100117393 297
55 3300006353 Ga0075370_10055249 Ga0075370_100552493 297
56 3300050489 nmdc:mga03683_13776_c1 nmdc:mga03683_13776_c1_1272_2246 297
57 3300050491 nmdc:mga00v17_500_c1 nmdc:mga00v17_500_c1_2916_3890 297
58 3300050516 nmdc:mga0sz30_5150_c2 nmdc:mga0sz30_5150_c2_935_1909 297
59 3300005353 Ga0070669_100035780 Ga0070669_1000357802 300
60 3300005367 Ga0070667_100016953 Ga0070667_1000169534 300
61 3300005539 Ga0068853_100290888 Ga0068853_1002908882 300
62 3300005843 Ga0068860_100004347 Ga0068860_10000434714 300
63 3300005844 Ga0068862_100007450 Ga0068862_1000074506 300
64 3300006237 Ga0097621_100007477 Ga0097621_1000074775 300
65 3300006358 Ga0068871_100008165 Ga0068871_1000081654 300
66 3300006881 Ga0068865_100167227 Ga0068865_1001672272 300
67 3300009101 Ga0105247_10200962 Ga0105247_102009622 300
68 3300009177 Ga0105248_10054430 Ga0105248_100544304 300
69 3300013306 Ga0163162_10210996 Ga0163162_102109962 300
70 3300013308 Ga0157375_10041958 Ga0157375_100419584 300
71 3300025923 Ga0207681_10017187 Ga0207681_100171873 300
72 3300025941 Ga0207711_10300674 Ga0207711_103006742 300
73 3300025986 Ga0207658_10007394 Ga0207658_100073945 300
74 3300026088 Ga0207641_10380152 Ga0207641_103801522 300
75 3300028380 Ga0268265_10001225 Ga0268265_1000122517 300
76 3300028381 Ga0268264_10271876 Ga0268264_102718762 300
77 3300031548 Ga0307408_100266787 Ga0307408_1002667872 300
78 3300031731 Ga0307405_10015778 Ga0307405_100157784 300
79 3300031731 Ga0307405_10253598 Ga0307405_102535982 300
80 3300031903 Ga0307407_10280323 Ga0307407_102803231 300
81 3300031911 Ga0307412_10093621 Ga0307412_100936212 300
82 3300031911 Ga0307412_10138949 Ga0307412_101389492 300
83 3300031995 Ga0307409_100014320 Ga0307409_1000143203 300
84 3300031995 Ga0307409_100147935 Ga0307409_1001479352 300
85 3300032002 Ga0307416_100106906 Ga0307416_1001069062 300
86 3300032004 Ga0307414_10033961 Ga0307414_100339612 300
87 3300032004 Ga0307414_10244193 Ga0307414_102441932 300
88 3300032005 Ga0307411_10023336 Ga0307411_100233362 300
89 3300032126 Ga0307415_100026521 Ga0307415_1000265212 300
90 3300032126 Ga0307415_100053547 Ga0307415_1000535473 300
91 3300032126 Ga0307415_100221779 Ga0307415_1002217792 300
92 3300044694 Ga0466963_0094741 Ga0466963_0094741_449_1426 300
93 iso_pu_bacteria 2895880812 2895882793 301
94 3300005328 Ga0070676_10099337 Ga0070676_100993372 302
95 3300005334 Ga0068869_100276232 Ga0068869_1002762321 302
96 3300005347 Ga0070668_100000431 Ga0070668_10000043121 302
97 3300005354 Ga0070675_100238409 Ga0070675_1002384092 302
98 3300005356 Ga0070674_100034704 Ga0070674_1000347042 302
99 3300005364 Ga0070673_100004485 Ga0070673_1000044855 302
100 3300005366 Ga0070659_100301147 Ga0070659_1003011471 302
101 3300005456 Ga0070678_100033080 Ga0070678_1000330802 302
102 3300005457 Ga0070662_100002095 Ga0070662_1000020954 302
103 3300005458 Ga0070681_10283804 Ga0070681_102838041 302
104 3300005466 Ga0070685_10168404 Ga0070685_101684042 302
105 3300005548 Ga0070665_100002737 Ga0070665_10000273713 302
106 3300005563 Ga0068855_100079954 Ga0068855_1000799543 302
107 3300005616 Ga0068852_100483914 Ga0068852_1004839142 302
108 3300005617 Ga0068859_100186363 Ga0068859_1001863633 302
109 3300005718 Ga0068866_10154528 Ga0068866_101545282 302
110 3300006237 Ga0097621_100049835 Ga0097621_1000498353 302
111 3300006931 Ga0097620_100186360 Ga0097620_1001863601 302
112 3300011119 Ga0105246_10000072 Ga0105246_1000007244 302
113 3300013104 Ga0157370_10125673 Ga0157370_101256732 302
114 3300025901 Ga0207688_10160548 Ga0207688_101605482 302
115 3300025907 Ga0207645_10004885 Ga0207645_100048854 302
116 3300025908 Ga0207643_10038255 Ga0207643_100382552 302
117 3300025912 Ga0207707_10326368 Ga0207707_103263681 302
118 3300025932 Ga0207690_10247325 Ga0207690_102473251 302
119 3300025933 Ga0207706_10001541 Ga0207706_100015419 302
120 3300025942 Ga0207689_10054178 Ga0207689_100541782 302
121 3300025949 Ga0207667_10058035 Ga0207667_100580353 302
122 3300025960 Ga0207651_10009168 Ga0207651_100091683 302
123 3300025972 Ga0207668_10000254 Ga0207668_1000025416 302
124 3300025986 Ga0207658_10003499 Ga0207658_100034997 302
125 3300026089 Ga0207648_10006490 Ga0207648_100064906 302
126 3300026121 Ga0207683_10045029 Ga0207683_100450294 302
127 3300028379 Ga0268266_10022449 Ga0268266_100224495 302
128 iso_pu_bacteria 2775507255 2778124405 302
129 iso_pu_bacteria 2818991438 2819552086 302
130 iso_pu_bacteria 2896253425 2896256180 302
131 iso_pu_bacteria 8057101203 8057102298 302
132 3300005289 Ga0065704_10075037 Ga0065704_100750374 303
133 3300005329 Ga0070683_100046884 Ga0070683_1000468844 303
134 3300005339 Ga0070660_100228901 Ga0070660_1002289012 303
135 3300005344 Ga0070661_100006727 Ga0070661_1000067276 303
136 3300005345 Ga0070692_10113691 Ga0070692_101136912 303
137 3300005355 Ga0070671_100174306 Ga0070671_1001743062 303
138 3300005366 Ga0070659_100036185 Ga0070659_1000361853 303
139 3300005366 Ga0070659_100088090 Ga0070659_1000880902 303
140 3300005457 Ga0070662_100008822 Ga0070662_1000088226 303
141 3300005457 Ga0070662_100302823 Ga0070662_1003028231 303
142 3300005539 Ga0068853_100052418 Ga0068853_1000524184 303
143 3300005547 Ga0070693_100177376 Ga0070693_1001773762 303
144 3300005563 Ga0068855_100008073 Ga0068855_1000080739 303
145 3300005563 Ga0068855_100364171 Ga0068855_1003641712 303
146 3300005564 Ga0070664_100048566 Ga0070664_1000485662 303
147 3300005564 Ga0070664_100176976 Ga0070664_1001769762 303
148 3300005577 Ga0068857_100011994 Ga0068857_1000119942 303
149 3300005577 Ga0068857_100018898 Ga0068857_1000188987 303
150 3300005614 Ga0068856_100085562 Ga0068856_1000855623 303
151 3300005617 Ga0068859_100118875 Ga0068859_1001188752 303
152 3300005618 Ga0068864_100010801 Ga0068864_1000108011 303
153 3300005841 Ga0068863_100145772 Ga0068863_1001457722 303
154 3300005842 Ga0068858_100542178 Ga0068858_1005421781 303
155 3300006237 Ga0097621_100137884 Ga0097621_1001378841 303
156 3300006931 Ga0097620_100118878 Ga0097620_1001188782 303
157 3300010375 Ga0105239_10226084 Ga0105239_102260842 303
158 3300013105 Ga0157369_10008210 Ga0157369_100082104 303
159 3300013307 Ga0157372_10090608 Ga0157372_100906082 303
160 3300013307 Ga0157372_10095292 Ga0157372_100952922 303
161 3300014325 Ga0163163_10111163 Ga0163163_101111633 303
162 3300014968 Ga0157379_10010859 Ga0157379_100108592 303
163 3300025904 Ga0207647_10124822 Ga0207647_101248222 303
164 3300025909 Ga0207705_10049616 Ga0207705_100496163 303
165 3300025917 Ga0207660_10112623 Ga0207660_101126232 303
166 3300025919 Ga0207657_10000281 Ga0207657_1000028157 303
167 3300025920 Ga0207649_10004657 Ga0207649_100046573 303
168 3300025920 Ga0207649_10288241 Ga0207649_102882412 303
169 3300025921 Ga0207652_10502759 Ga0207652_105027591 303
170 3300025933 Ga0207706_10005611 Ga0207706_100056117 303
171 3300025933 Ga0207706_10257888 Ga0207706_102578882 303
172 3300025941 Ga0207711_10241554 Ga0207711_102415542 303
173 3300025945 Ga0207679_10390831 Ga0207679_103908311 303
174 3300025945 Ga0207679_10411785 Ga0207679_104117851 303
175 3300025949 Ga0207667_10013829 Ga0207667_100138295 303
176 3300026035 Ga0207703_10292976 Ga0207703_102929762 303
177 3300026078 Ga0207702_10051826 Ga0207702_100518263 303
178 3300026088 Ga0207641_10039563 Ga0207641_100395633 303
179 3300026116 Ga0207674_10001303 Ga0207674_100013033 303
180 3300026116 Ga0207674_10009638 Ga0207674_100096387 303
181 3300026116 Ga0207674_10033199 Ga0207674_100331993 303
182 3300028381 Ga0268264_10042652 Ga0268264_100426525 303
183 3300037418 Ga0395900_0002077 Ga0395900_0002077_12530_13504 303
184 3300037471 Ga0395905_0171167 Ga0395905_0171167_1013_1996 303
185 3300038443 Ga0395901_0000041 Ga0395901_0000041_107607_108581 303
186 3300046660 Ga0495625_0003155 Ga0495625_0003155_10585_11565 303
187 3300048905 Ga0496102_0058276 Ga0496102_0058276_157_1140 303
188 3300048907 Ga0496104_0482941 Ga0496104_0482941_126_1109 303
189 3300048910 Ga0496107_0007356 Ga0496107_0007356_6079_7062 303
190 3300048911 Ga0496108_0003258 Ga0496108_0003258_8140_9123 303
191 3300048913 Ga0496110_0074569 Ga0496110_0074569_480_1463 303
192 3300048915 Ga0496112_0147084 Ga0496112_0147084_702_1685 303
193 3300048916 Ga0496113_0012546 Ga0496113_0012546_3727_4710 303
194 3300005347 Ga0070668_100046403 Ga0070668_1000464032 304
195 3300005366 Ga0070659_100022870 Ga0070659_1000228702 304
196 3300005616 Ga0068852_100213893 Ga0068852_1002138932 304
197 3300005617 Ga0068859_100018537 Ga0068859_1000185372 304
198 3300005842 Ga0068858_100005088 Ga0068858_10000508813 304
199 3300006931 Ga0097620_100018538 Ga0097620_1000185382 304
200 3300009177 Ga0105248_10021318 Ga0105248_100213186 304
201 3300013105 Ga0157369_10336168 Ga0157369_103361682 304
202 3300013296 Ga0157374_10255291 Ga0157374_102552912 304
203 3300025931 Ga0207644_10068679 Ga0207644_100686792 304
204 3300025972 Ga0207668_10098414 Ga0207668_100984142 304
205 3300026035 Ga0207703_10001348 Ga0207703_1000134817 304
206 3300026041 Ga0207639_10038110 Ga0207639_100381102 304
207 3300026142 Ga0207698_10310662 Ga0207698_103106622 304
208 3300045976 Ga0466967_0041456 Ga0466967_0041456_1456_2430 304
209 3300048912 Ga0496109_0040656 Ga0496109_0040656_637_1608 304
210 3300048914 Ga0496111_0037397 Ga0496111_0037397_1219_2190 304
211 3300048917 Ga0496114_0375845 Ga0496114_0375845_220_1188 304
212 3300048918 Ga0496115_0237561 Ga0496115_0237561_115_1086 304
213 3300005295 Ga0065707_10135688 Ga0065707_101356882 305
214 3300005327 Ga0070658_10224302 Ga0070658_102243022 305
215 3300005546 Ga0070696_100166553 Ga0070696_1001665532 305
216 3300005563 Ga0068855_100005354 Ga0068855_1000053549 305
217 3300005563 Ga0068855_100026337 Ga0068855_1000263372 305
218 3300005843 Ga0068860_100048782 Ga0068860_1000487823 305
219 3300006051 Ga0075364_10100934 Ga0075364_101009342 305
220 3300006177 Ga0075362_10000008 Ga0075362_1000000873 305
221 3300006178 Ga0075367_10024869 Ga0075367_100248693 305
222 3300006186 Ga0075369_10001040 Ga0075369_100010405 305
223 3300006195 Ga0075366_10000016 Ga0075366_1000001621 305
224 3300006353 Ga0075370_10000018 Ga0075370_1000001854 305
225 3300006353 Ga0075370_10000409 Ga0075370_1000040912 305
226 3300009094 Ga0111539_10052625 Ga0111539_100526252 305
227 3300009094 Ga0111539_10288858 Ga0111539_102888582 305
228 3300009545 Ga0105237_10385268 Ga0105237_103852681 305
229 3300025909 Ga0207705_10248400 Ga0207705_102484001 305
230 3300025949 Ga0207667_10005425 Ga0207667_1000542513 305
231 3300025949 Ga0207667_10018354 Ga0207667_100183543 305
232 3300025961 Ga0207712_10098495 Ga0207712_100984952 305
233 3300028381 Ga0268264_10035913 Ga0268264_100359133 305
234 3300031548 Ga0307408_100065324 Ga0307408_1000653243 305
235 3300031548 Ga0307408_100383842 Ga0307408_1003838422 305
236 3300031731 Ga0307405_10011970 Ga0307405_100119705 305
237 3300031852 Ga0307410_10010015 Ga0307410_100100153 305
238 3300031903 Ga0307407_10041898 Ga0307407_100418982 305
239 3300031995 Ga0307409_100013852 Ga0307409_1000138524 305
240 3300032002 Ga0307416_100121167 Ga0307416_1001211672 305
241 3300032005 Ga0307411_10084625 Ga0307411_100846252 305
242 3300035691 Ga0373931_0055469 Ga0373931_0055469_719_1690 305
243 3300035725 Ga0373947_0078094 Ga0373947_0078094_409_1389 305
244 3300038705 Ga0237819_04064 Ga0237819_04064_521_1492 305
245 3300039145 Ga0237816_00947 Ga0237816_00947_946_1917 305
246 3300044712 Ga0453684_0224767 Ga0453684_0224767_615_1586 305
247 3300046522 Ga0495643_0018156 Ga0495643_0018156_1014_1994 305
248 3300048924 Ga0496121_0001928 Ga0496121_0001928_12319_13290 305
249 3300048925 Ga0496122_0024191 Ga0496122_0024191_2868_3839 305
250 3300048926 Ga0496123_0052352 Ga0496123_0052352_763_1734 305
251 3300048927 Ga0496124_0000579 Ga0496124_0000579_57630_58601 305
252 3300048927 Ga0496124_0005053 Ga0496124_0005053_6330_7301 305
253 3300048928 Ga0496125_0000587 Ga0496125_0000587_3437_4408 305
254 3300050489 nmdc:mga03683_15_c1 nmdc:mga03683_15_c1_27982_28953 305
255 3300050491 nmdc:mga00v17_83321_c1 nmdc:mga00v17_83321_c1_133_1104 305
256 3300050493 nmdc:mga0k408_21_c1 nmdc:mga0k408_21_c1_64669_65640 305
257 3300050494 nmdc:mga06z11_15779_c1 nmdc:mga06z11_15779_c1_268_1239 305
258 3300050496 nmdc:mga07m45_13_c2 nmdc:mga07m45_13_c2_83939_84910 305
259 3300050496 nmdc:mga07m45_685_c1 nmdc:mga07m45_685_c1_2658_3632 305
260 3300050516 nmdc:mga0sz30_375_c1 nmdc:mga0sz30_375_c1_3804_4775 305
261 3300053087 Ga0500643_001267 Ga0500643_001267_10621_11589 305
262 3300053087 Ga0500643_022647 Ga0500643_022647_373_1344 305
263 3300053130 Ga0500642_0030821 Ga0500642_0030821_674_1654 305
264 3300053133 Ga0500655_000018 Ga0500655_000018_6627_7607 305
265 3300053142 Ga0500577_0004476 Ga0500577_0004476_2503_3483 305
266 3300053148 Ga0500590_004222 Ga0500590_004222_2468_3448 305
267 3300053156 Ga0500622_0012038 Ga0500622_0012038_1231_2202 305
268 3300053163 Ga0500639_005131 Ga0500639_005131_4455_5435 305
269 3300053724 Ga0500570_000223 Ga0500570_000223_10994_11974 305
270 3300061719 Ga0466962_0054724 Ga0466962_0054724_884_1861 305
271 3300001915 JGI24741J21665_1002416 JGI24741J21665_10024162 306
272 3300001979 JGI24740J21852_10006300 JGI24740J21852_100063006 306
273 3300001989 JGI24739J22299_10033941 JGI24739J22299_100339412 306
274 3300001990 JGI24737J22298_10004845 JGI24737J22298_100048453 306
275 3300002075 JGI24738J21930_10010261 JGI24738J21930_100102612 306
276 3300005295 Ga0065707_10088792 Ga0065707_100887922 306
277 3300005353 Ga0070669_100000226 Ga0070669_1000002265 306
278 3300005366 Ga0070659_100007726 Ga0070659_1000077267 306
279 3300005367 Ga0070667_100077381 Ga0070667_1000773813 306
280 3300005455 Ga0070663_100005623 Ga0070663_1000056233 306
281 3300005614 Ga0068856_100004363 Ga0068856_1000043639 306
282 3300005618 Ga0068864_100043352 Ga0068864_1000433522 306
283 3300005843 Ga0068860_100012805 Ga0068860_1000128057 306
284 3300009093 Ga0105240_10300228 Ga0105240_103002282 306
285 3300009174 Ga0105241_10008072 Ga0105241_100080728 306
286 3300009177 Ga0105248_10045151 Ga0105248_100451515 306
287 3300009545 Ga0105237_10093798 Ga0105237_100937982 306
288 3300010375 Ga0105239_10043294 Ga0105239_100432945 306
289 3300013104 Ga0157370_10075285 Ga0157370_100752851 306
290 3300013104 Ga0157370_10195540 Ga0157370_101955402 306
291 3300013306 Ga0163162_10076924 Ga0163162_100769244 306
292 3300025903 Ga0207680_10051992 Ga0207680_100519921 306
293 3300025914 Ga0207671_10029228 Ga0207671_100292284 306
294 3300025919 Ga0207657_10027695 Ga0207657_100276952 306
295 3300025923 Ga0207681_10000092 Ga0207681_1000009246 306
296 3300025924 Ga0207694_10028224 Ga0207694_100282243 306
297 3300025932 Ga0207690_10047615 Ga0207690_100476153 306
298 3300025981 Ga0207640_10041424 Ga0207640_100414243 306
299 3300025986 Ga0207658_10067538 Ga0207658_100675382 306
300 3300026067 Ga0207678_10001799 Ga0207678_1000179913 306
301 3300026078 Ga0207702_10002022 Ga0207702_1000202213 306
302 3300026095 Ga0207676_10054440 Ga0207676_100544402 306
303 3300026142 Ga0207698_10007078 Ga0207698_100070783 306
304 3300027876 Ga0209974_10002423 Ga0209974_100024232 306
305 3300028379 Ga0268266_10197444 Ga0268266_101974442 306
306 3300028381 Ga0268264_10019681 Ga0268264_100196813 306
307 3300031548 Ga0307408_100013243 Ga0307408_1000132434 306
308 3300031731 Ga0307405_10008126 Ga0307405_100081266 306
309 3300031731 Ga0307405_10078541 Ga0307405_100785412 306
310 3300031852 Ga0307410_10015066 Ga0307410_100150663 306
311 3300031901 Ga0307406_10035149 Ga0307406_100351493 306
312 3300031911 Ga0307412_10012417 Ga0307412_100124173 306
313 3300031911 Ga0307412_10014322 Ga0307412_100143223 306
314 3300031911 Ga0307412_10053605 Ga0307412_100536052 306
315 3300032002 Ga0307416_100014784 Ga0307416_1000147842 306
316 3300032002 Ga0307416_100481077 Ga0307416_1004810772 306
317 3300032005 Ga0307411_10030912 Ga0307411_100309123 306
318 3300032005 Ga0307411_10198965 Ga0307411_101989652 306
319 3300048903 Ga0496100_0062953 Ga0496100_0062953_567_1541 306
320 3300048907 Ga0496104_0077906 Ga0496104_0077906_152_1126 306
321 3300048908 Ga0496105_0290055 Ga0496105_0290055_100_1074 306
322 3300048909 Ga0496106_0008340 Ga0496106_0008340_5807_6781 306
323 3300048910 Ga0496107_0005216 Ga0496107_0005216_3111_4085 306
324 3300048914 Ga0496111_0080186 Ga0496111_0080186_792_1766 306
325 3300048915 Ga0496112_0136925 Ga0496112_0136925_103_1077 306
326 3300048916 Ga0496113_0000355 Ga0496113_0000355_1622_2596 306
327 3300048927 Ga0496124_0167405 Ga0496124_0167405_164_1135 306
328 2162886007 SwRhRL2b_contig_37157 SwRhRL2b_0444.00005900 307
329 3300005289 Ga0065704_10002074 Ga0065704_100020743 307
330 3300005347 Ga0070668_100155715 Ga0070668_1001557152 307
331 3300009011 Ga0105251_10008696 Ga0105251_100086962 307
332 3300009553 Ga0105249_10101365 Ga0105249_101013653 307
333 3300017792 Ga0163161_10033410 Ga0163161_100334104 307
334 3300025961 Ga0207712_10059299 Ga0207712_100592992 307
335 3300031824 Ga0307413_10025013 Ga0307413_100250132 307
336 3300032005 Ga0307411_10028107 Ga0307411_100281072 307
337 3300048911 Ga0496108_0002094 Ga0496108_0002094_10955_11926 307
338 3300048913 Ga0496110_0046405 Ga0496110_0046405_289_1260 307
339 3300048919 Ga0496116_0038457 Ga0496116_0038457_1248_2219 307
340 3300048924 Ga0496121_0000175 Ga0496121_0000175_102251_103222 307
341 3300048925 Ga0496122_0023956 Ga0496122_0023956_2764_3735 307
342 3300048926 Ga0496123_0017873 Ga0496123_0017873_2864_3835 307
343 3300048927 Ga0496124_0006227 Ga0496124_0006227_10113_11084 307
344 3300048927 Ga0496124_0224109 Ga0496124_0224109_277_1248 307
345 3300048928 Ga0496125_0000445 Ga0496125_0000445_40985_41956 307
346 3300048929 Ga0496126_0016112 Ga0496126_0016112_5959_6930 307

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00482

T2SSF

Type II secretion system (T2SS), protein F

183

313

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
2vmb-assembly2.cif.gz_B the three-dimensional structure of the cytoplasmic domains of epsf from the type 2 secretion system of vibrio cholerae 0.8612 171 288
5nbg-assembly1.cif.gz_B structure of the cytoplasmic domain i of outf in the d. dadantii type ii secretion system 0.8578 171 281
2vma-assembly1.cif.gz_A the three-dimensional structure of the cytoplasmic domains of epsf from the type 2 secretion system of vibrio cholerae 0.8568 171 288
3c1q-assembly1.cif.gz_A the three-dimensional structure of the cytoplasmic domains of epsf from the type 2 secretion system of vibrio cholerae 0.8524 171 279
2whn-assembly1.cif.gz_A n-terminal domain from the pilc type iv pilus biogenesis protein 0.8508 171 276
ID Description Score Start End Superfamily
af_I6Y479_96_222_1.20.81.30 Mainly Alpha;Up-down Bundle;Receptor-associated Protein;Type II secretion system (T2SS), domain F 0.8231 178 307 1.20.81.30
af_I6Y479_96_222_1.20.81.30 Mainly Alpha;Up-down Bundle;Receptor-associated Protein;Type II secretion system (T2SS), domain F 0.8116 178 307 1.20.81.30
af_P41441_261_365_1.20.81.30 Mainly Alpha;Up-down Bundle;Receptor-associated Protein;Type II secretion system (T2SS), domain F 0.8008 175 282 1.20.81.30
af_P41441_261_365_1.20.81.30 Mainly Alpha;Up-down Bundle;Receptor-associated Protein;Type II secretion system (T2SS), domain F 0.761 175 282 1.20.81.30
3iqtA01 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);HPT domain 0.4837 160 247 1.20.120.160
ID Description Score Start End GO Terms
AF-A0A5R2N1Y6-F1-model_v4 Type II secretion system F family protein 0.9409 157 295 GO:0005886
AF-A0A5R2N1Y6-F1-model_v4 Type II secretion system F family protein 0.9158 157 295 GO:0005886
AF-A0A2V8BKU7-F1-model_v4 Type II secretion system protein GspF domain-containing protein 0.9154 154 306 GO:0005886
AF-A0A7C6FF52-F1-model_v4 Type II secretion system F family protein 0.913 105 306 GO:0005886
AF-A0A524IBM1-F1-model_v4 Type II secretion system F family protein 0.907 138 306 GO:0005886

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pLDDT pTM Quality
79.74 0.66 Medium
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Predicted Structure (AlphaFold2)

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