F416278

General Info

Members Datasets Scaffolds Average Seq Length
345 216 342 417

Family's Representative Sequence

Representative Sequence 3300005467|Ga0070706_100128539|Ga0070706_1001285392
Length 477
Sequence MPQASETLERVFREEYGRIIATLIRLSGSFDLAEESLQEAFATALSTWARDGVPRKPGAWLTTVAHRKLLDVVRREKTRSEKQTELEYETEWLQPEKPELAELEGHLKYQVDSPNGYSENYPDERLRLIFTCCHPSLNQESQVALTLRTLGGLTTGEIARAFLLPEPTLAQRLVRAKGKIRLARIPYQVPPRELLPERLASVRAVVYLIFNEGYSATAGDNLIRPDLCAESIRLARVLCELVPDDPENPGLLALLLLQDSRRHARIDKSGELVTLEEQDRSLWDQKQITEGLRLIRTALHMRPAGGRVGVYQLQAAIAAVHAEAKTAAETDWPQIVGLYAELKRINSSPVVALNHAAAVAMGEGFEQGLRLIEAAGASGKLEQYYLFHAARGDLLNRLGRTEEAQAAYARALELTANQVEQKYVRRKLREMKAVGSRQKKVTCLLCVYELLLSAFCFLPSAYWLSPFPLFPFFPLSS

Samples

Sample ID Description Type Environment
1 2162886006 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v1 Metagenome Rhizosphere
2 2643221572 Leifsonia sp. Root60 Isolate Unclassified
3 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
4 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
5 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
6 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
7 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
8 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
9 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
10 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
11 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
12 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
13 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
14 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
15 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
16 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
17 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
18 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
22 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
23 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
24 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
25 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
26 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
27 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
28 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
29 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
30 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
31 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
32 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
33 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
34 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
35 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
36 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
37 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
38 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
39 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
40 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
41 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
42 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
43 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
44 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
45 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
46 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
47 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
48 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
49 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
50 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
51 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
52 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
53 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
54 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
55 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
56 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
57 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
58 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
59 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
61 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
62 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
63 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
64 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
65 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
66 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
67 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
68 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
69 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
70 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
71 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
72 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
73 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
74 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
75 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
76 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
77 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
78 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
79 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
80 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
81 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
82 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
83 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
84 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
85 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
86 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
87 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
88 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
89 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
117 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
120 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
121 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
122 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
123 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
124 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
125 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
126 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
127 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
128 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
129 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
130 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
131 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
132 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
133 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
134 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
135 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
136 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
137 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
138 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
139 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
140 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
141 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
142 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
143 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
144 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
145 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
146 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
147 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
148 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
149 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
150 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
151 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
152 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
153 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
154 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
155 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
156 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
157 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
158 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
159 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
160 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
161 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
162 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
163 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
164 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
165 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
166 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
167 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
168 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
169 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
170 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
171 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
172 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
173 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
174 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
175 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
176 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
177 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
178 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
179 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
180 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
181 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
182 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
183 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
184 3300049514 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A25_B_5_drought Metagenome Rhizosphere
185 3300049519 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_B_7_drought Metagenome Rhizosphere
186 3300049520 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_B_7_drought Metagenome Rhizosphere
187 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
188 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
189 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
190 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
191 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
192 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
193 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
194 3300049660 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_B_0_control Metagenome Rhizosphere
195 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
196 3300049666 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A4_B_2_control Metagenome Rhizosphere
197 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
198 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
199 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
200 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
201 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
202 3300049779 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought Metagenome Rhizosphere
203 3300049851 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_B_0_drought Metagenome Rhizosphere
204 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
205 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
206 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
207 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
208 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
209 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
210 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
211 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
212 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
213 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
214 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
215 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
216 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.13
Metatranscriptomes 0
Isolates 0.87

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.87
Nodule 0
Rhizoplane 2.32
Rhizosphere 93.62
Stem 0
Stem Tuber 0
Unclassified 3.19

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL3b_contig_2918982 2162886006 Bacteria 2158
2 JGI24751J29686_10000151 3300002459 Bacteria 33241
3 JGI25406J46586_10002732 3300003203 Bacteria 8314
4 JGI25406J46586_10009259 3300003203 Bacteria 4414
5 rootH2_10058193 3300003320 Bacteria 3061
6 Ga0065714_10064429 3300005288 Bacteria 141954
7 Ga0065704_10002289 3300005289 Bacteria 6053
8 Ga0065704_10097268 3300005289 Bacteria 2403
9 Ga0065712_10067729 3300005290 Bacteria 142513
10 Ga0065715_10000643 3300005293 Bacteria 10483
11 Ga0065715_10142759 3300005293 Bacteria 1829
12 Ga0065707_10002736 3300005295 Bacteria 5327
13 Ga0070670_100000071 3300005331 Bacteria 102454
14 Ga0068869_100014558 3300005334 Bacteria 5258
15 Ga0068869_100050428 3300005334 Bacteria 3017
16 Ga0068869_100168923 3300005334 Bacteria 1707
17 Ga0070682_100021218 3300005337 Bacteria 3829
18 Ga0070682_100091321 3300005337 Bacteria 1993
19 Ga0070689_100002208 3300005340 Bacteria 12619
20 Ga0070692_10039531 3300005345 Unclassified 2409
21 Ga0070692_10092174 3300005345 Bacteria 1649
22 Ga0070669_100010861 3300005353 Bacteria 6463
23 Ga0070673_100081385 3300005364 Bacteria 2626
24 Ga0070673_100173078 3300005364 Bacteria 1844
25 Ga0070667_100104737 3300005367 Bacteria 2447
26 Ga0070709_10038312 3300005434 Bacteria 2934
27 Ga0070714_100055667 3300005435 Bacteria 3381
28 Ga0070713_100023147 3300005436 Bacteria 4814
29 Ga0070710_10044520 3300005437 Bacteria 2463
30 Ga0070711_100026780 3300005439 Bacteria 3781
31 Ga0070700_100000022 3300005441 Bacteria 130126
32 Ga0070694_100003466 3300005444 Bacteria 9447
33 Ga0070694_100060964 3300005444 Bacteria 2574
34 Ga0070708_100002247 3300005445 Bacteria 14929
35 Ga0070708_100028317 3300005445 Bacteria 4820
36 Ga0070708_100059708 3300005445 Bacteria 3401
37 Ga0070681_10003904 3300005458 Bacteria 14051
38 Ga0070681_10219154 3300005458 Bacteria 1818
39 Ga0070706_100000015 3300005467 Bacteria 188425
40 Ga0070706_100004084 3300005467 Bacteria 14196
41 Ga0070706_100116716 3300005467 Bacteria 2486
42 Ga0070706_100128539 3300005467 Bacteria 2363
43 Ga0070706_100189282 3300005467 Bacteria 1923
44 Ga0070707_100016686 3300005468 Bacteria 6894
45 Ga0070707_100020223 3300005468 Bacteria 6277
46 Ga0070707_100145447 3300005468 Bacteria 2307
47 Ga0070698_100000157 3300005471 Bacteria 61949
48 Ga0070698_100002686 3300005471 Bacteria 19596
49 Ga0070698_100021450 3300005471 Bacteria 6765
50 Ga0070698_100055024 3300005471 Bacteria 4038
51 Ga0070698_100083589 3300005471 Bacteria 3182
52 Ga0070698_100256955 3300005471 Bacteria 1679
53 Ga0070699_100008132 3300005518 Bacteria 9108
54 Ga0070699_100027911 3300005518 Bacteria 4868
55 Ga0070699_100088314 3300005518 Bacteria 2708
56 Ga0070699_100121305 3300005518 Bacteria 2299
57 Ga0070699_100221812 3300005518 Unclassified 1685
58 Ga0070697_100000157 3300005536 Bacteria 55346
59 Ga0070697_100000715 3300005536 Bacteria 24741
60 Ga0070697_100065787 3300005536 Bacteria 2963
61 Ga0070697_100072345 3300005536 Bacteria 2829
62 Ga0068853_100008591 3300005539 Bacteria 8211
63 Ga0070695_100005657 3300005545 Bacteria 7365
64 Ga0070695_100011603 3300005545 Bacteria 5272
65 Ga0070695_100043583 3300005545 Bacteria 2853
66 Ga0070695_100065648 3300005545 Bacteria 2364
67 Ga0070693_100003018 3300005547 Bacteria 7803
68 Ga0070693_100016365 3300005547 Bacteria 3838
69 Ga0070704_100009098 3300005549 Bacteria 5993
70 Ga0070704_100119602 3300005549 Bacteria 2021
71 Ga0068855_100042352 3300005563 Bacteria 5395
72 Ga0070664_100268823 3300005564 Bacteria 1535
73 Ga0068857_100056229 3300005577 Bacteria 3492
74 Ga0068857_100209913 3300005577 Bacteria 1777
75 Ga0068857_100214573 3300005577 Unclassified 1756
76 Ga0068854_100043838 3300005578 Unclassified 3173
77 Ga0070702_100021141 3300005615 Bacteria 3419
78 Ga0068852_100129758 3300005616 Bacteria 2320
79 Ga0068859_100000683 3300005617 Bacteria 34065
80 Ga0068859_100024375 3300005617 Bacteria 6069
81 Ga0068859_100039783 3300005617 Bacteria 4718
82 Ga0068859_100060139 3300005617 Bacteria 3828
83 Ga0068859_100087448 3300005617 Bacteria 3164
84 Ga0068859_100165301 3300005617 Bacteria 2293
85 Ga0068859_100171979 3300005617 Bacteria 2247
86 Ga0068864_100051895 3300005618 Unclassified 3534
87 Ga0068864_100054476 3300005618 Bacteria 3452
88 Ga0068861_100004814 3300005719 Bacteria 9075
89 Ga0068861_100040532 3300005719 Unclassified 3484
90 Ga0068861_100170372 3300005719 Bacteria 1804
91 Ga0068863_100041140 3300005841 Bacteria 4393
92 Ga0068863_100045846 3300005841 Bacteria 4149
93 Ga0068858_100041593 3300005842 Bacteria 4261
94 Ga0068860_100147974 3300005843 Bacteria 2261
95 Ga0068860_100176326 3300005843 Bacteria 2066
96 Ga0068862_100033613 3300005844 Bacteria 4336
97 Ga0081455_10002058 3300005937 Bacteria 24054
98 Ga0081538_10003189 3300005981 Bacteria 15573
99 Ga0081539_10000875 3300005985 Bacteria 57733
100 Ga0081539_10004022 3300005985 Bacteria 16901
101 Ga0081539_10072639 3300005985 Bacteria 1838
102 Ga0070717_10017466 3300006028 Bacteria 5583
103 Ga0070717_10103080 3300006028 Bacteria 2425
104 Ga0070717_10115174 3300006028 Bacteria 2297
105 Ga0070715_10000026 3300006163 Bacteria 97907
106 Ga0070716_100004008 3300006173 Bacteria 6991
107 Ga0070712_100003175 3300006175 Bacteria 10126
108 Ga0097621_100002182 3300006237 Bacteria 13392
109 Ga0068871_100040671 3300006358 Bacteria 3724
110 Ga0068871_100169255 3300006358 Unclassified 1872
111 Ga0068871_100187576 3300006358 Bacteria 1780
112 Ga0075428_100064196 3300006844 Bacteria 4020
113 Ga0075431_100005107 3300006847 Bacteria 12911
114 Ga0075431_100039958 3300006847 Unclassified 4833
115 Ga0075431_100143119 3300006847 Unclassified 2464
116 Ga0075431_100317133 3300006847 Unclassified 1572
117 Ga0075433_10011109 3300006852 Bacteria 7242
118 Ga0075433_10106633 3300006852 Bacteria 2484
119 Ga0075434_100064615 3300006871 Bacteria 3644
120 Ga0075434_100105531 3300006871 Bacteria 2827
121 Ga0075434_100122430 3300006871 Unclassified 2617
122 Ga0075429_100131061 3300006880 Bacteria 2193
123 Ga0097620_100000683 3300006931 Bacteria 34065
124 Ga0097620_100024374 3300006931 Bacteria 6069
125 Ga0097620_100039783 3300006931 Bacteria 4718
126 Ga0097620_100060144 3300006931 Bacteria 3828
127 Ga0097620_100087447 3300006931 Bacteria 3164
128 Ga0097620_100165301 3300006931 Bacteria 2293
129 Ga0097620_100171989 3300006931 Bacteria 2247
130 Ga0075435_100022463 3300007076 Bacteria 4869
131 Ga0075435_100043779 3300007076 Bacteria 3584
132 Ga0075435_100247884 3300007076 Unclassified 1516
133 Ga0105240_10015106 3300009093 Bacteria 10508
134 Ga0111539_10014389 3300009094 Bacteria 9874
135 Ga0111539_10017089 3300009094 Bacteria 8980
136 Ga0111539_10035449 3300009094 Bacteria 6040
137 Ga0111539_10202702 3300009094 Bacteria 2313
138 Ga0105247_10000796 3300009101 Bacteria 24171
139 Ga0114129_10042907 3300009147 Bacteria 6365
140 Ga0114129_10043841 3300009147 Bacteria 6294
141 Ga0114129_10097534 3300009147 Bacteria 4069
142 Ga0114129_10176852 3300009147 Bacteria 2907
143 Ga0114129_10292852 3300009147 Unclassified 2172
144 Ga0114129_10612779 3300009147 Unclassified 1409
145 Ga0105243_10000102 3300009148 Bacteria 97833
146 Ga0105243_10003105 3300009148 Bacteria 13660
147 Ga0105243_10278787 3300009148 Bacteria 1505
148 Ga0105241_10059297 3300009174 Bacteria 2942
149 Ga0105241_10083315 3300009174 Bacteria 2509
150 Ga0105242_10000122 3300009176 Bacteria 57301
151 Ga0105248_10001611 3300009177 Bacteria 25097
152 Ga0105248_10011296 3300009177 Bacteria 9848
153 Ga0105248_10072498 3300009177 Bacteria 3871
154 Ga0105248_10170219 3300009177 Unclassified 2455
155 Ga0105238_10016593 3300009551 Bacteria 7456
156 Ga0105249_10087890 3300009553 Bacteria 2901
157 Ga0157373_10007604 3300013100 Bacteria 8054
158 Ga0157370_10002159 3300013104 Bacteria 24010
159 Ga0157370_10094664 3300013104 Bacteria 2802
160 Ga0157369_10003960 3300013105 Bacteria 17565
161 Ga0157369_10008851 3300013105 Bacteria 11528
162 Ga0157378_10174666 3300013297 Unclassified 2017
163 Ga0163162_10013903 3300013306 Bacteria 7862
164 Ga0163162_10036014 3300013306 Bacteria 4930
165 Ga0163162_10190029 3300013306 Bacteria 2181
166 Ga0163162_10294794 3300013306 Unclassified 1754
167 Ga0157372_10013721 3300013307 Bacteria 8659
168 Ga0157375_10187573 3300013308 Bacteria 2222
169 Ga0163163_10000188 3300014325 Bacteria 63392
170 Ga0163163_10002047 3300014325 Bacteria 17019
171 Ga0163163_10259753 3300014325 Bacteria 1788
172 Ga0157380_10066152 3300014326 Bacteria 2907
173 Ga0157379_10043710 3300014968 Bacteria 4000
174 Ga0163161_10198233 3300017792 Bacteria 1546
175 Ga0207692_10070670 3300025898 Bacteria 1838
176 Ga0207710_10000602 3300025900 Bacteria 21021
177 Ga0207647_10000808 3300025904 Bacteria 24255
178 Ga0207685_10000009 3300025905 Bacteria 242842
179 Ga0207643_10002253 3300025908 Bacteria 10512
180 Ga0207684_10000083 3300025910 Bacteria 176092
181 Ga0207684_10002647 3300025910 Bacteria 17923
182 Ga0207684_10053092 3300025910 Bacteria 3440
183 Ga0207684_10056727 3300025910 Bacteria 3323
184 Ga0207684_10164337 3300025910 Bacteria 1912
185 Ga0207707_10053347 3300025912 Bacteria 3519
186 Ga0207693_10000696 3300025915 Bacteria 30225
187 Ga0207663_10003405 3300025916 Bacteria 7777
188 Ga0207646_10001018 3300025922 Bacteria 35832
189 Ga0207646_10019040 3300025922 Bacteria 6391
190 Ga0207646_10142525 3300025922 Unclassified 2159
191 Ga0207694_10001759 3300025924 Bacteria 18159
192 Ga0207650_10000006 3300025925 Bacteria 544730
193 Ga0207700_10055260 3300025928 Bacteria 2984
194 Ga0207664_10149771 3300025929 Bacteria 1981
195 Ga0207686_10000062 3300025934 Bacteria 97842
196 Ga0207709_10000091 3300025935 Bacteria 144622
197 Ga0207670_10002834 3300025936 Bacteria 9147
198 Ga0207665_10009615 3300025939 Bacteria 6349
199 Ga0207665_10055660 3300025939 Bacteria 2669
200 Ga0207711_10030447 3300025941 Bacteria 4552
201 Ga0207711_10068268 3300025941 Bacteria 3079
202 Ga0207689_10003850 3300025942 Bacteria 13676
203 Ga0207689_10042509 3300025942 Bacteria 3759
204 Ga0207689_10077319 3300025942 Bacteria 2736
205 Ga0207667_10100312 3300025949 Bacteria 2986
206 Ga0207651_10029386 3300025960 Bacteria 3482
207 Ga0207651_10116742 3300025960 Bacteria 2015
208 Ga0207708_10000040 3300026075 Bacteria 130242
209 Ga0207708_10152006 3300026075 Bacteria 1823
210 Ga0207641_10041743 3300026088 Bacteria 3845
211 Ga0207676_10009830 3300026095 Bacteria 6804
212 Ga0207674_10083976 3300026116 Unclassified 3183
213 Ga0207674_10124683 3300026116 Bacteria 2542
214 Ga0207675_100009276 3300026118 Bacteria 9228
215 Ga0207675_100105709 3300026118 Unclassified 2653
216 Ga0207675_100157914 3300026118 Bacteria 2162
217 Ga0207428_10006714 3300027907 Bacteria 10565
218 Ga0207428_10042266 3300027907 Bacteria 3685
219 Ga0268265_10047043 3300028380 Bacteria 3230
220 Ga0268264_10178102 3300028381 Bacteria 1929
221 Ga0268264_10232050 3300028381 Bacteria 1705
222 Ga0307517_10163025 3300028786 Bacteria 1490
223 Ga0307515_10021477 3300028794 Bacteria 11445
224 Ga0265324_10000022 3300029957 Bacteria 167667
225 Ga0307512_10003939 3300030522 Bacteria 16612
226 Ga0265325_10001530 3300031241 Bacteria 16205
227 Ga0307513_10006295 3300031456 Bacteria 15548
228 Ga0307408_100112592 3300031548 Bacteria 2093
229 Ga0307408_100175150 3300031548 Unclassified 1716
230 Ga0307508_10044086 3300031616 Bacteria 3992
231 Ga0307406_10038581 3300031901 Bacteria 2958
232 Ga0307406_10069480 3300031901 Bacteria 2303
233 Ga0307406_10107160 3300031901 Unclassified 1915
234 Ga0307407_10088417 3300031903 Unclassified 1893
235 Ga0307416_100056656 3300032002 Bacteria 3165
236 Ga0307416_100215000 3300032002 Unclassified 1838
237 Ga0307414_10114932 3300032004 Unclassified 2057
238 Ga0307411_10132109 3300032005 Bacteria 1826
239 Ga0373949_0013546 3300035090 Bacteria 1809
240 Ga0373941_0011693 3300035115 Bacteria 2275
241 Ga0373956_0003416 3300035119 Bacteria 6395
242 Ga0373942_0014836 3300035207 Bacteria 1891
243 Ga0373933_0020128 3300035724 Bacteria 3780
244 Ga0373937_0013222 3300036401 Bacteria 7269
245 Ga0373925_0111345 3300037068 Bacteria 2115
246 Ga0395900_0054370 3300037418 Bacteria 4123
247 Ga0395898_0108500 3300037466 Bacteria 2662
248 Ga0395901_0330764 3300038443 Bacteria 1575
249 Ga0242420_000662 3300038996 Bacteria 4069
250 Ga0451833_1504492 3300041491 Bacteria 1708
251 Ga0451837_0202954 3300041494 Bacteria 3476
252 Ga0451843_1399428 3300041509 Bacteria 3486
253 Ga0466957_0034208 3300044842 Bacteria 3049
254 Ga0451576_0156835 3300045051 Bacteria 2375
255 Ga0466958_0023647 3300045836 Bacteria 3610
256 Ga0466958_0039349 3300045836 Bacteria 2841
257 Ga0466967_0080923 3300045976 Bacteria 2933
258 Ga0495592_0066206 3300046454 Bacteria 2644
259 Ga0495592_0170156 3300046454 Bacteria 1493
260 Ga0495603_0077647 3300046455 Bacteria 1948
261 Ga0495651_0003759 3300046462 Bacteria 11612
262 Ga0495653_0026946 3300046463 Bacteria 4604
263 Ga0495580_0049400 3300046472 Bacteria 2977
264 Ga0495662_0000264 3300046476 Bacteria 22236
265 Ga0495608_0014855 3300046511 Bacteria 5402
266 Ga0495618_0011214 3300046514 Bacteria 5430
267 Ga0495628_0015000 3300046516 Bacteria 6475
268 Ga0495630_0085473 3300046517 Bacteria 2381
269 Ga0495632_0026629 3300046519 Bacteria 3042
270 Ga0495652_0025133 3300046529 Bacteria 5272
271 Ga0495652_0071129 3300046529 Bacteria 2905
272 Ga0495640_0023172 3300046533 Bacteria 4531
273 Ga0495587_0022526 3300046536 Bacteria 3879
274 Ga0495645_0006808 3300046543 Bacteria 7941
275 Ga0495667_0009953 3300046559 Bacteria 6439
276 Ga0495667_0043876 3300046559 Bacteria 2962
277 Ga0495634_0094968 3300046642 Bacteria 1931
278 Ga0495635_0057562 3300046663 Bacteria 2674
279 Ga0495657_0005229 3300046675 Bacteria 10277
280 Ga0495646_0001048 3300046680 Bacteria 16018
281 Ga0495646_0004977 3300046680 Bacteria 8391
282 Ga0495613_0008474 3300046689 Bacteria 7627
283 Ga0495600_0020336 3300046809 Bacteria 4246
284 Ga0495581_0040711 3300047315 Bacteria 2688
285 Ga0495604_0002122 3300047317 Bacteria 15964
286 Ga0495636_0008115 3300047318 Bacteria 4139
287 Ga0495674_0019502 3300047319 Bacteria 6291
288 Ga0495680_0004847 3300047322 Bacteria 12760
289 Ga0495675_0021600 3300047444 Bacteria 4100
290 Ga0495602_0048914 3300048088 Bacteria 3793
291 Ga0495602_0123963 3300048088 Bacteria 2073
292 Ga0496102_0000002 3300048905 Bacteria 814588
293 Ga0496103_0000017 3300048906 Bacteria 244768
294 Ga0496104_0004779 3300048907 Bacteria 11796
295 Ga0496104_0103234 3300048907 Bacteria 2731
296 Ga0496108_0062986 3300048911 Bacteria 3123
297 Ga0496108_0167233 3300048911 Bacteria 1902
298 Ga0496115_0058493 3300048918 Bacteria 3102
299 Ga0496115_0085333 3300048918 Bacteria 2575
300 Ga0501291_003089 3300049514 Bacteria 2052
301 Ga0501296_002657 3300049519 Bacteria 1881
302 Ga0501296_005754 3300049519 Unclassified 1391
303 Ga0501297_001963 3300049520 Bacteria 1950
304 Ga0501298_005345 3300049521 Unclassified 2057
305 Ga0501298_013405 3300049521 Bacteria 1451
306 Ga0501299_006951 3300049522 Bacteria 1789
307 Ga0501040_0196361 3300049576 Bacteria 1432
308 Ga0501070_0029478 3300049586 Bacteria 4600
309 Ga0501071_0087330 3300049587 Bacteria 2288
310 Ga0501075_0118421 3300049591 Bacteria 2014
311 Ga0501207_000239 3300049654 Bacteria 5591
312 Ga0501216_012446 3300049660 Bacteria 1397
313 Ga0501224_003184 3300049664 Unclassified 2280
314 Ga0501228_002799 3300049666 Bacteria 1395
315 Ga0501233_006022 3300049668 Unclassified 2267
316 Ga0501235_004242 3300049669 Bacteria 3106
317 Ga0501221_002770 3300049704 Unclassified 2883
318 Ga0501225_0005725 3300049705 Bacteria 3640
319 Ga0501225_0017207 3300049705 Unclassified 2006
320 Ga0501234_000665 3300049707 Bacteria 5313
321 Ga0501283_000690 3300049779 Bacteria 4457
322 Ga0501212_000732 3300049851 Bacteria 3356
323 nmdc:mga05p37_43644_c1 3300050507 Bacteria 5516
324 nmdc:mga05p37_89365_c1 3300050507 Bacteria 3796
325 nmdc:mga09592_128842_c1 3300050508 Bacteria 2176
326 nmdc:mga09592_203761_c1 3300050508 Bacteria 1713
327 nmdc:mga0qj67_85399_c1 3300050509 Bacteria 2531
328 nmdc:mga06r32_12118_c1 3300050510 Bacteria 7777
329 nmdc:mga06r32_9968_c1 3300050510 Bacteria 8572
330 nmdc:mga0n895_262590_c1 3300050512 Unclassified 1752
331 nmdc:mga0rr50_12720_c1 3300050513 Bacteria 5452
332 nmdc:mga0rr50_34636_c1 3300050513 Bacteria 3618
333 nmdc:mga0a205_110547_c1 3300050515 Bacteria 2647
334 nmdc:mga0a205_273797_c1 3300050515 Bacteria 1565
335 nmdc:mga0a205_43743_c1 3300050515 Unclassified 4317
336 nmdc:mga0a205_51136_c1 3300050515 Unclassified 3164
337 Ga0495601_0011958 3300053077 Bacteria 5202
338 Ga0495595_0020141 3300053084 Bacteria 2900
339 Ga0495619_0002285 3300053085 Bacteria 12638
340 Ga0500644_0008444 3300053088 Bacteria 2720
341 Ga0500641_0061334 3300053096 Bacteria 1566
342 Ga0500616_0004837 3300053153 Bacteria 9407

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300031901 Ga0307406_10069480 Ga0307406_100694802 341
2 3300005468 Ga0070707_100016686 Ga0070707_1000166863 347
3 3300025922 Ga0207646_10019040 Ga0207646_100190406 347
4 3300046454 Ga0495592_0170156 Ga0495592_0170156_11_1093 352
5 3300048918 Ga0496115_0085333 Ga0496115_0085333_1442_2545 359
6 3300049666 Ga0501228_002799 Ga0501228_002799_13_1137 370
7 3300013297 Ga0157378_10174666 Ga0157378_101746662 375
8 3300041491 Ga0451833_1504492 Ga0451833_1504492_412_1653 376
9 3300041494 Ga0451837_0202954 Ga0451837_0202954_1750_2991 376
10 3300005367 Ga0070667_100104737 Ga0070667_1001047372 378
11 3300005841 Ga0068863_100041140 Ga0068863_1000411404 378
12 3300017792 Ga0163161_10198233 Ga0163161_101982332 378
13 3300025942 Ga0207689_10077319 Ga0207689_100773192 378
14 3300026088 Ga0207641_10041743 Ga0207641_100417434 378
15 3300014326 Ga0157380_10066152 Ga0157380_100661523 380
16 3300005981 Ga0081538_10003189 Ga0081538_1000318915 381
17 3300005937 Ga0081455_10002058 Ga0081455_100020585 382
18 3300006847 Ga0075431_100005107 Ga0075431_1000051077 382
19 3300050510 nmdc:mga06r32_9968_c1 nmdc:mga06r32_9968_c1_3856_5010 382
20 3300045836 Ga0466958_0023647 Ga0466958_0023647_2357_3535 383
21 3300045836 Ga0466958_0039349 Ga0466958_0039349_723_1901 383
22 3300005434 Ga0070709_10038312 Ga0070709_100383125 384
23 3300049576 Ga0501040_0196361 Ga0501040_0196361_121_1371 384
24 3300049587 Ga0501071_0087330 Ga0501071_0087330_340_1590 384
25 3300049591 Ga0501075_0118421 Ga0501075_0118421_431_1681 384
26 3300006028 Ga0070717_10115174 Ga0070717_101151743 385
27 3300041509 Ga0451843_1399428 Ga0451843_1399428_455_1696 385
28 3300048905 Ga0496102_0000002 Ga0496102_0000002_608507_609700 385
29 3300048906 Ga0496103_0000017 Ga0496103_0000017_201724_202917 385
30 3300005337 Ga0070682_100091321 Ga0070682_1000913212 389
31 3300050512 nmdc:mga0n895_262590_c1 nmdc:mga0n895_262590_c1_51_1226 390
32 3300035119 Ga0373956_0003416 Ga0373956_0003416_186_1421 393
33 3300005518 Ga0070699_100121305 Ga0070699_1001213053 394
34 3300005985 Ga0081539_10072639 Ga0081539_100726392 397
35 3300029957 Ga0265324_10000022 Ga0265324_1000002221 397
36 3300028786 Ga0307517_10163025 Ga0307517_101630251 398
37 3300028794 Ga0307515_10021477 Ga0307515_100214772 398
38 3300030522 Ga0307512_10003939 Ga0307512_100039396 398
39 3300031456 Ga0307513_10006295 Ga0307513_1000629510 398
40 3300031616 Ga0307508_10044086 Ga0307508_100440861 398
41 3300046519 Ga0495632_0026629 Ga0495632_0026629_223_1443 398
42 3300053088 Ga0500644_0008444 Ga0500644_0008444_526_1746 398
43 3300053096 Ga0500641_0061334 Ga0500641_0061334_198_1418 398
44 3300046463 Ga0495653_0026946 Ga0495653_0026946_1517_2734 399
45 3300046476 Ga0495662_0000264 Ga0495662_0000264_17433_18650 399
46 3300046511 Ga0495608_0014855 Ga0495608_0014855_1838_3055 399
47 3300046516 Ga0495628_0015000 Ga0495628_0015000_4106_5323 399
48 3300046517 Ga0495630_0085473 Ga0495630_0085473_1153_2370 399
49 3300046529 Ga0495652_0025133 Ga0495652_0025133_2109_3326 399
50 3300046533 Ga0495640_0023172 Ga0495640_0023172_2613_3830 399
51 3300046536 Ga0495587_0022526 Ga0495587_0022526_611_1828 399
52 3300046543 Ga0495645_0006808 Ga0495645_0006808_3066_4283 399
53 3300046559 Ga0495667_0043876 Ga0495667_0043876_167_1384 399
54 3300046642 Ga0495634_0094968 Ga0495634_0094968_12_1229 399
55 3300046675 Ga0495657_0005229 Ga0495657_0005229_3904_5121 399
56 3300046680 Ga0495646_0001048 Ga0495646_0001048_9953_11170 399
57 3300046689 Ga0495613_0008474 Ga0495613_0008474_6399_7616 399
58 3300047315 Ga0495581_0040711 Ga0495581_0040711_169_1386 399
59 3300047444 Ga0495675_0021600 Ga0495675_0021600_2243_3460 399
60 3300048088 Ga0495602_0123963 Ga0495602_0123963_246_1463 399
61 3300053077 Ga0495601_0011958 Ga0495601_0011958_100_1317 399
62 3300053153 Ga0500616_0004837 Ga0500616_0004837_451_1677 400
63 3300044842 Ga0466957_0034208 Ga0466957_0034208_1713_2927 401
64 3300009147 Ga0114129_10097534 Ga0114129_100975342 402
65 3300045051 Ga0451576_0156835 Ga0451576_0156835_933_2159 402
66 3300013104 Ga0157370_10094664 Ga0157370_100946644 403
67 3300045976 Ga0466967_0080923 Ga0466967_0080923_328_1596 403
68 3300005458 Ga0070681_10219154 Ga0070681_102191542 404
69 3300005563 Ga0068855_100042352 Ga0068855_1000423526 404
70 3300013104 Ga0157370_10002159 Ga0157370_1000215912 404
71 3300013105 Ga0157369_10003960 Ga0157369_100039607 404
72 3300013105 Ga0157369_10008851 Ga0157369_100088516 404
73 3300013307 Ga0157372_10013721 Ga0157372_100137215 404
74 3300025949 Ga0207667_10100312 Ga0207667_101003124 404
75 3300049586 Ga0501070_0029478 Ga0501070_0029478_3106_4374 404
76 3300031241 Ga0265325_10001530 Ga0265325_1000153013 405
77 3300031901 Ga0307406_10107160 Ga0307406_101071603 405
78 3300049654 Ga0501207_000239 Ga0501207_000239_4343_5569 405
79 3300049664 Ga0501224_003184 Ga0501224_003184_280_1506 405
80 3300049668 Ga0501233_006022 Ga0501233_006022_393_1619 405
81 3300049704 Ga0501221_002770 Ga0501221_002770_756_1982 405
82 3300049705 Ga0501225_0017207 Ga0501225_0017207_462_1688 405
83 3300049707 Ga0501234_000665 Ga0501234_000665_13_1239 405
84 3300005441 Ga0070700_100000022 Ga0070700_10000002262 406
85 3300026075 Ga0207708_10000040 Ga0207708_1000004058 406
86 3300005564 Ga0070664_100268823 Ga0070664_1002688231 407
87 3300005617 Ga0068859_100000683 Ga0068859_10000068320 407
88 3300006871 Ga0075434_100105531 Ga0075434_1001055312 407
89 3300006931 Ga0097620_100000683 Ga0097620_10000068320 407
90 3300009177 Ga0105248_10011296 Ga0105248_100112965 407
91 3300009177 Ga0105248_10072498 Ga0105248_100724984 407
92 3300013306 Ga0163162_10013903 Ga0163162_100139034 407
93 3300014325 Ga0163163_10259753 Ga0163163_102597532 407
94 3300025941 Ga0207711_10068268 Ga0207711_100682683 407
95 3300050515 nmdc:mga0a205_273797_c1 nmdc:mga0a205_273797_c1_231_1478 407
96 3300003203 JGI25406J46586_10009259 JGI25406J46586_100092593 408
97 3300005435 Ga0070714_100055667 Ga0070714_1000556675 408
98 3300005437 Ga0070710_10044520 Ga0070710_100445202 408
99 3300005439 Ga0070711_100026780 Ga0070711_1000267802 408
100 3300005547 Ga0070693_100016365 Ga0070693_1000163654 408
101 3300005577 Ga0068857_100209913 Ga0068857_1002099132 408
102 3300006028 Ga0070717_10017466 Ga0070717_100174666 408
103 3300006028 Ga0070717_10103080 Ga0070717_101030803 408
104 3300006175 Ga0070712_100003175 Ga0070712_1000031754 408
105 3300007076 Ga0075435_100022463 Ga0075435_1000224636 408
106 3300025898 Ga0207692_10070670 Ga0207692_100706702 408
107 3300025915 Ga0207693_10000696 Ga0207693_1000069617 408
108 3300025916 Ga0207663_10003405 Ga0207663_100034055 408
109 3300025929 Ga0207664_10149771 Ga0207664_101497712 408
110 3300026116 Ga0207674_10124683 Ga0207674_101246831 408
111 3300035724 Ga0373933_0020128 Ga0373933_0020128_49_1314 408
112 3300036401 Ga0373937_0013222 Ga0373937_0013222_5751_7016 408
113 3300046454 Ga0495592_0066206 Ga0495592_0066206_1304_2569 408
114 3300046455 Ga0495603_0077647 Ga0495603_0077647_285_1553 408
115 3300046462 Ga0495651_0003759 Ga0495651_0003759_8250_9515 408
116 3300046514 Ga0495618_0011214 Ga0495618_0011214_168_1433 408
117 3300046529 Ga0495652_0071129 Ga0495652_0071129_139_1404 408
118 3300046559 Ga0495667_0009953 Ga0495667_0009953_1277_2542 408
119 3300046663 Ga0495635_0057562 Ga0495635_0057562_730_1995 408
120 3300046680 Ga0495646_0004977 Ga0495646_0004977_2891_4156 408
121 3300046809 Ga0495600_0020336 Ga0495600_0020336_447_1712 408
122 3300047317 Ga0495604_0002122 Ga0495604_0002122_8865_10130 408
123 3300047319 Ga0495674_0019502 Ga0495674_0019502_4291_5556 408
124 3300047322 Ga0495680_0004847 Ga0495680_0004847_9330_10595 408
125 3300048088 Ga0495602_0048914 Ga0495602_0048914_807_2072 408
126 3300048907 Ga0496104_0004779 Ga0496104_0004779_9385_10650 408
127 3300048907 Ga0496104_0103234 Ga0496104_0103234_1154_2425 408
128 3300048918 Ga0496115_0058493 Ga0496115_0058493_1601_2869 408
129 3300050513 nmdc:mga0rr50_12720_c1 nmdc:mga0rr50_12720_c1_1012_2289 408
130 3300053084 Ga0495595_0020141 Ga0495595_0020141_1493_2758 408
131 3300053085 Ga0495619_0002285 Ga0495619_0002285_4587_5852 408
132 3300003203 JGI25406J46586_10002732 JGI25406J46586_100027326 409
133 3300005334 Ga0068869_100050428 Ga0068869_1000504282 409
134 3300005436 Ga0070713_100023147 Ga0070713_1000231472 409
135 3300005617 Ga0068859_100171979 Ga0068859_1001719792 409
136 3300005985 Ga0081539_10000875 Ga0081539_100008758 409
137 3300006931 Ga0097620_100171989 Ga0097620_1001719892 409
138 3300009174 Ga0105241_10059297 Ga0105241_100592973 409
139 3300025928 Ga0207700_10055260 Ga0207700_100552602 409
140 3300025942 Ga0207689_10042509 Ga0207689_100425092 409
141 iso_pu_bacteria 2643221572 2643877510 409
142 iso_pu_bacteria 2643221669 2644384565 409
143 iso_pu_bacteria 2895660088 2895662346 409
144 3300002459 JGI24751J29686_10000151 JGI24751J29686_1000015113 410
145 3300003320 rootH2_10058193 rootH2_100581932 410
146 3300005293 Ga0065715_10000643 Ga0065715_100006435 410
147 3300005331 Ga0070670_100000071 Ga0070670_10000007113 410
148 3300005334 Ga0068869_100014558 Ga0068869_1000145582 410
149 3300005337 Ga0070682_100021218 Ga0070682_1000212184 410
150 3300005345 Ga0070692_10092174 Ga0070692_100921741 410
151 3300005364 Ga0070673_100173078 Ga0070673_1001730781 410
152 3300005444 Ga0070694_100003466 Ga0070694_1000034666 410
153 3300005445 Ga0070708_100002247 Ga0070708_1000022477 410
154 3300005445 Ga0070708_100028317 Ga0070708_1000283173 410
155 3300005458 Ga0070681_10003904 Ga0070681_100039044 410
156 3300005467 Ga0070706_100000015 Ga0070706_100000015138 410
157 3300005467 Ga0070706_100116716 Ga0070706_1001167162 410
158 3300005468 Ga0070707_100145447 Ga0070707_1001454472 410
159 3300005471 Ga0070698_100256955 Ga0070698_1002569551 410
160 3300005518 Ga0070699_100008132 Ga0070699_1000081321 410
161 3300005536 Ga0070697_100072345 Ga0070697_1000723451 410
162 3300005539 Ga0068853_100008591 Ga0068853_1000085916 410
163 3300005545 Ga0070695_100005657 Ga0070695_1000056573 410
164 3300005547 Ga0070693_100003018 Ga0070693_1000030189 410
165 3300005577 Ga0068857_100056229 Ga0068857_1000562294 410
166 3300005617 Ga0068859_100039783 Ga0068859_1000397832 410
167 3300005618 Ga0068864_100051895 Ga0068864_1000518953 410
168 3300005843 Ga0068860_100147974 Ga0068860_1001479742 410
169 3300005844 Ga0068862_100033613 Ga0068862_1000336133 410
170 3300006844 Ga0075428_100064196 Ga0075428_1000641962 410
171 3300006847 Ga0075431_100143119 Ga0075431_1001431191 410
172 3300006847 Ga0075431_100317133 Ga0075431_1003171331 410
173 3300006880 Ga0075429_100131061 Ga0075429_1001310612 410
174 3300006931 Ga0097620_100039783 Ga0097620_1000397832 410
175 3300007076 Ga0075435_100043779 Ga0075435_1000437794 410
176 3300009093 Ga0105240_10015106 Ga0105240_100151065 410
177 3300009094 Ga0111539_10035449 Ga0111539_100354493 410
178 3300009147 Ga0114129_10042907 Ga0114129_100429073 410
179 3300009147 Ga0114129_10612779 Ga0114129_106127791 410
180 3300009148 Ga0105243_10278787 Ga0105243_102787871 410
181 3300009551 Ga0105238_10016593 Ga0105238_100165932 410
182 3300009553 Ga0105249_10087890 Ga0105249_100878902 410
183 3300013100 Ga0157373_10007604 Ga0157373_100076048 410
184 3300013306 Ga0163162_10036014 Ga0163162_100360142 410
185 3300013306 Ga0163162_10190029 Ga0163162_101900292 410
186 3300013308 Ga0157375_10187573 Ga0157375_101875732 410
187 3300014325 Ga0163163_10000188 Ga0163163_1000018813 410
188 3300014325 Ga0163163_10002047 Ga0163163_100020479 410
189 3300025910 Ga0207684_10000083 Ga0207684_1000008325 410
190 3300025910 Ga0207684_10056727 Ga0207684_100567271 410
191 3300025912 Ga0207707_10053347 Ga0207707_100533472 410
192 3300025924 Ga0207694_10001759 Ga0207694_1000175911 410
193 3300025925 Ga0207650_10000006 Ga0207650_10000006292 410
194 3300025939 Ga0207665_10055660 Ga0207665_100556603 410
195 3300025942 Ga0207689_10003850 Ga0207689_100038506 410
196 3300026075 Ga0207708_10152006 Ga0207708_101520061 410
197 3300027907 Ga0207428_10042266 Ga0207428_100422662 410
198 3300028380 Ga0268265_10047043 Ga0268265_100470431 410
199 3300028381 Ga0268264_10232050 Ga0268264_102320501 410
200 3300031548 Ga0307408_100112592 Ga0307408_1001125922 410
201 3300032002 Ga0307416_100056656 Ga0307416_1000566563 410
202 3300032005 Ga0307411_10132109 Ga0307411_101321092 410
203 3300035090 Ga0373949_0013546 Ga0373949_0013546_398_1654 410
204 3300035115 Ga0373941_0011693 Ga0373941_0011693_942_2234 410
205 3300035207 Ga0373942_0014836 Ga0373942_0014836_103_1356 410
206 3300037418 Ga0395900_0054370 Ga0395900_0054370_2370_3626 410
207 3300037466 Ga0395898_0108500 Ga0395898_0108500_860_2116 410
208 3300038443 Ga0395901_0330764 Ga0395901_0330764_206_1462 410
209 3300038996 Ga0242420_000662 Ga0242420_000662_10_1371 410
210 3300048911 Ga0496108_0062986 Ga0496108_0062986_1033_2337 410
211 3300049514 Ga0501291_003089 Ga0501291_003089_423_1679 410
212 3300049519 Ga0501296_002657 Ga0501296_002657_445_1701 410
213 3300049520 Ga0501297_001963 Ga0501297_001963_250_1506 410
214 3300049521 Ga0501298_013405 Ga0501298_013405_25_1281 410
215 3300049522 Ga0501299_006951 Ga0501299_006951_88_1341 410
216 3300049660 Ga0501216_012446 Ga0501216_012446_22_1278 410
217 3300049669 Ga0501235_004242 Ga0501235_004242_29_1285 410
218 3300049705 Ga0501225_0005725 Ga0501225_0005725_971_2227 410
219 3300049779 Ga0501283_000690 Ga0501283_000690_1316_2572 410
220 3300049851 Ga0501212_000732 Ga0501212_000732_1612_2868 410
221 3300050507 nmdc:mga05p37_43644_c1 nmdc:mga05p37_43644_c1_323_1570 410
222 3300050508 nmdc:mga09592_128842_c1 nmdc:mga09592_128842_c1_349_1605 410
223 3300050508 nmdc:mga09592_203761_c1 nmdc:mga09592_203761_c1_155_1417 410
224 3300050509 nmdc:mga0qj67_85399_c1 nmdc:mga0qj67_85399_c1_1014_2276 410
225 3300050513 nmdc:mga0rr50_34636_c1 nmdc:mga0rr50_34636_c1_438_1688 410
226 3300005288 Ga0065714_10064429 Ga0065714_1006442956 411
227 3300005290 Ga0065712_10067729 Ga0065712_1006772956 411
228 3300005545 Ga0070695_100065648 Ga0070695_1000656482 411
229 3300005549 Ga0070704_100119602 Ga0070704_1001196021 411
230 3300005577 Ga0068857_100214573 Ga0068857_1002145731 411
231 3300005719 Ga0068861_100170372 Ga0068861_1001703722 411
232 3300005841 Ga0068863_100045846 Ga0068863_1000458462 411
233 3300006852 Ga0075433_10011109 Ga0075433_100111096 411
234 3300006852 Ga0075433_10106633 Ga0075433_101066332 411
235 3300009147 Ga0114129_10043841 Ga0114129_100438416 411
236 3300009148 Ga0105243_10003105 Ga0105243_100031056 411
237 3300014968 Ga0157379_10043710 Ga0157379_100437102 411
238 3300025960 Ga0207651_10029386 Ga0207651_100293863 411
239 3300026116 Ga0207674_10083976 Ga0207674_100839763 411
240 3300026118 Ga0207675_100157914 Ga0207675_1001579142 411
241 3300048911 Ga0496108_0167233 Ga0496108_0167233_408_1670 411
242 3300050507 nmdc:mga05p37_89365_c1 nmdc:mga05p37_89365_c1_2454_3716 411
243 3300050515 nmdc:mga0a205_110547_c1 nmdc:mga0a205_110547_c1_81_1343 411
244 3300005334 Ga0068869_100168923 Ga0068869_1001689232 412
245 3300005444 Ga0070694_100060964 Ga0070694_1000609644 412
246 3300005471 Ga0070698_100002686 Ga0070698_1000026867 412
247 3300005471 Ga0070698_100083589 Ga0070698_1000835892 412
248 3300005545 Ga0070695_100011603 Ga0070695_1000116036 412
249 3300005615 Ga0070702_100021141 Ga0070702_1000211414 412
250 3300005617 Ga0068859_100024375 Ga0068859_1000243755 412
251 3300005719 Ga0068861_100004814 Ga0068861_1000048142 412
252 3300005842 Ga0068858_100041593 Ga0068858_1000415932 412
253 3300006237 Ga0097621_100002182 Ga0097621_1000021824 412
254 3300006358 Ga0068871_100040671 Ga0068871_1000406712 412
255 3300006931 Ga0097620_100024374 Ga0097620_1000243745 412
256 3300009177 Ga0105248_10170219 Ga0105248_101702192 412
257 3300025904 Ga0207647_10000808 Ga0207647_1000080817 412
258 3300025941 Ga0207711_10030447 Ga0207711_100304472 412
259 3300026118 Ga0207675_100009276 Ga0207675_1000092764 412
260 3300031901 Ga0307406_10038581 Ga0307406_100385813 412
261 3300005536 Ga0070697_100065787 Ga0070697_1000657872 413
262 3300009147 Ga0114129_10176852 Ga0114129_101768523 413
263 3300031548 Ga0307408_100175150 Ga0307408_1001751501 413
264 3300049519 Ga0501296_005754 Ga0501296_005754_49_1308 413
265 3300049521 Ga0501298_005345 Ga0501298_005345_168_1427 413
266 3300006358 Ga0068871_100169255 Ga0068871_1001692552 414
267 3300006871 Ga0075434_100064615 Ga0075434_1000646152 414
268 3300031903 Ga0307407_10088417 Ga0307407_100884171 414
269 3300032002 Ga0307416_100215000 Ga0307416_1002150001 414
270 3300032004 Ga0307414_10114932 Ga0307414_101149322 414
271 3300005468 Ga0070707_100020223 Ga0070707_1000202236 415
272 3300005471 Ga0070698_100055024 Ga0070698_1000550244 415
273 3300025910 Ga0207684_10002647 Ga0207684_100026472 415
274 3300025922 Ga0207646_10001018 Ga0207646_100010182 415
275 3300005289 Ga0065704_10097268 Ga0065704_100972681 416
276 3300005345 Ga0070692_10039531 Ga0070692_100395311 416
277 3300005445 Ga0070708_100059708 Ga0070708_1000597083 416
278 3300005340 Ga0070689_100002208 Ga0070689_1000022084 417
279 3300005353 Ga0070669_100010861 Ga0070669_1000108618 417
280 3300005364 Ga0070673_100081385 Ga0070673_1000813851 417
281 3300005467 Ga0070706_100004084 Ga0070706_1000040848 417
282 3300005471 Ga0070698_100000157 Ga0070698_10000015737 417
283 3300005471 Ga0070698_100021450 Ga0070698_1000214502 417
284 3300005518 Ga0070699_100088314 Ga0070699_1000883142 417
285 3300005518 Ga0070699_100221812 Ga0070699_1002218122 417
286 3300005536 Ga0070697_100000157 Ga0070697_10000015728 417
287 3300005536 Ga0070697_100000715 Ga0070697_1000007158 417
288 3300005578 Ga0068854_100043838 Ga0068854_1000438384 417
289 3300005617 Ga0068859_100087448 Ga0068859_1000874482 417
290 3300005617 Ga0068859_100165301 Ga0068859_1001653012 417
291 3300005618 Ga0068864_100054476 Ga0068864_1000544762 417
292 3300005719 Ga0068861_100040532 Ga0068861_1000405323 417
293 3300005843 Ga0068860_100176326 Ga0068860_1001763262 417
294 3300006847 Ga0075431_100039958 Ga0075431_1000399584 417
295 3300006871 Ga0075434_100122430 Ga0075434_1001224303 417
296 3300006931 Ga0097620_100087447 Ga0097620_1000874472 417
297 3300006931 Ga0097620_100165301 Ga0097620_1001653012 417
298 3300007076 Ga0075435_100247884 Ga0075435_1002478841 417
299 3300009094 Ga0111539_10014389 Ga0111539_100143897 417
300 3300009101 Ga0105247_10000796 Ga0105247_100007962 417
301 3300009148 Ga0105243_10000102 Ga0105243_1000010246 417
302 3300009176 Ga0105242_10000122 Ga0105242_1000012235 417
303 3300009177 Ga0105248_10001611 Ga0105248_100016116 417
304 3300013306 Ga0163162_10294794 Ga0163162_102947942 417
305 3300025900 Ga0207710_10000602 Ga0207710_1000060210 417
306 3300025908 Ga0207643_10002253 Ga0207643_100022531 417
307 3300025910 Ga0207684_10053092 Ga0207684_100530921 417
308 3300025934 Ga0207686_10000062 Ga0207686_1000006246 417
309 3300025935 Ga0207709_10000091 Ga0207709_1000009136 417
310 3300025936 Ga0207670_10002834 Ga0207670_100028346 417
311 3300025960 Ga0207651_10116742 Ga0207651_101167422 417
312 3300026095 Ga0207676_10009830 Ga0207676_100098306 417
313 3300026118 Ga0207675_100105709 Ga0207675_1001057093 417
314 3300028381 Ga0268264_10178102 Ga0268264_101781022 417
315 3300047318 Ga0495636_0008115 Ga0495636_0008115_1254_2570 417
316 3300050510 nmdc:mga06r32_12118_c1 nmdc:mga06r32_12118_c1_1125_2393 417
317 3300050515 nmdc:mga0a205_43743_c1 nmdc:mga0a205_43743_c1_198_1469 417
318 3300050515 nmdc:mga0a205_51136_c1 nmdc:mga0a205_51136_c1_357_1625 417
319 3300005545 Ga0070695_100043583 Ga0070695_1000435831 418
320 3300005617 Ga0068859_100060139 Ga0068859_1000601391 418
321 3300005985 Ga0081539_10004022 Ga0081539_1000402211 418
322 3300006163 Ga0070715_10000026 Ga0070715_1000002613 418
323 3300006173 Ga0070716_100004008 Ga0070716_1000040083 418
324 3300006358 Ga0068871_100187576 Ga0068871_1001875761 418
325 3300006931 Ga0097620_100060144 Ga0097620_1000601441 418
326 3300009147 Ga0114129_10292852 Ga0114129_102928522 418
327 3300025905 Ga0207685_10000009 Ga0207685_10000009130 418
328 3300025939 Ga0207665_10009615 Ga0207665_100096152 418
329 3300005549 Ga0070704_100009098 Ga0070704_1000090985 419
330 3300009094 Ga0111539_10202702 Ga0111539_102027022 419
331 3300025922 Ga0207646_10142525 Ga0207646_101425252 419
332 3300037068 Ga0373925_0111345 Ga0373925_0111345_763_2070 419
333 3300046472 Ga0495580_0049400 Ga0495580_0049400_1166_2473 419
334 3300005518 Ga0070699_100027911 Ga0070699_1000279115 420
335 3300009174 Ga0105241_10083315 Ga0105241_100833153 420
336 3300005467 Ga0070706_100128539 Ga0070706_1001285392 422
337 3300005467 Ga0070706_100189282 Ga0070706_1001892822 422
338 3300025910 Ga0207684_10164337 Ga0207684_101643372 422
339 3300005616 Ga0068852_100129758 Ga0068852_1001297581 423
340 2162886006 SwRhRL3b_contig_2918982 SwRhRL3b_0399.00000630 425
341 3300005289 Ga0065704_10002289 Ga0065704_100022892 425
342 3300005293 Ga0065715_10142759 Ga0065715_101427592 425
343 3300005295 Ga0065707_10002736 Ga0065707_100027362 425
344 3300009094 Ga0111539_10017089 Ga0111539_100170894 425
345 3300027907 Ga0207428_10006714 Ga0207428_1000671411 425

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF20239

DUF6596

Family of unknown function (DUF6596)

198

299

0.99

PF04542

Sigma70_r2

Sigma-70 region 2

11

79

0.94

PF08281

Sigma70_r4_2

Sigma-70, region 4

127

180

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
2avp-assembly1.cif.gz_A crystal structure of an 8 repeat consensus tpr superhelix 0.8816 329 393
3kd7-assembly2.cif.gz_B designed tpr module (ctpr390) in complex with its peptide-ligand (hsp90 peptide) 0.8752 310 393
1na3-assembly2.cif.gz_B design of stable alpha-helical arrays from an idealized tpr motif 0.8649 325 414
1na3-assembly1.cif.gz_A design of stable alpha-helical arrays from an idealized tpr motif 0.8617 325 412
3kd7-assembly5.cif.gz_E designed tpr module (ctpr390) in complex with its peptide-ligand (hsp90 peptide) 0.8593 308 393
ID Description Score Start End Superfamily
af_P0AGM5_187_259_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8807 335 408 1.25.40.10
1na3B00 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8649 325 414 1.25.40.10
1na3A00 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8617 325 412 1.25.40.10
af_F1QF84_463_525_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8608 349 410 1.25.40.10
af_P0AGM5_187_259_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.859 335 408 1.25.40.10
ID Description Score Start End GO Terms
AF-A0A485EPJ3-F1-model_v4 deleted 0.9934 239 410
AF-A0A3D1CHE4-F1-model_v4 RNA polymerase subunit sigma-24 0.9934 292 414
AF-A0A3D3Q9U4-F1-model_v4 RNA polymerase subunit sigma-24 0.9922 303 410
AF-A0A7W0CFP6-F1-model_v4 Putative RNA polymerase sigma factor 0.9856 189 410
AF-A0A4Q3C676-F1-model_v4 RNA polymerase sigma factor 0.9853 215 412

Feature Viewer

pLDDT pTM Quality
88.72 0.86 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map