F416082

General Info

Members Datasets Scaffolds Average Seq Length
344 231 320 312

Family's Representative Sequence

Representative Sequence 3300044712|Ga0453684_0218136|Ga0453684_0218136_960_2012
Length 350
Sequence MPLAAANTPAQPPALPRYLALAGPTASGKTAAALAIARQHAVEIISVDSALVYRGMDIGTAKPTAAELAAVPHHLINIRDPLHAYSAAEFVADARALMADITARGKLPLLVGGTMLYFKALRDGLDDMPKADPAVRAVIEQEAAQKGWPALHAELAQVDPVTAARLAPADSQRIARALEVYRISGQPMASFHTTKNIATCAGNTLATDQNGSTHPDQAMLISLEPQDRAWLHQRIAQRFDAMLADGFVDEVKALRARGDLHPDLPAMRCVGYRQAWDYLDALQTQAAAKPGGAALLATLRDTGIFATRQLAKRQITWLRSMPDRRVVACDAPDALAQVLALARTFITSAA

Samples

Sample ID Description Type Environment
1 2511231002 Polaromonas sp. CF318 Isolate Rhizosphere
2 2511231003 Herbaspirillum sp. CF444 Isolate Rhizosphere
3 2600255292 Janthinobacterium lividum NFR18 Isolate Rhizoplane
4 2643221544 Pelomonas sp. Root1444 Isolate Unclassified
5 2643221585 Pelomonas sp. Root662 Isolate Unclassified
6 2643221639 Pelomonas sp. Root1217 Isolate Unclassified
7 2643221646 Pelomonas sp. Root1237 Isolate Unclassified
8 2643221656 Pelomonas sp. Root405 Isolate Unclassified
9 2738541297 Duganella sp. GV083 Isolate Unclassified
10 2738541337 Pelomonas sp. BT06 Isolate Unclassified
11 2738541357 Duganella sp. GV053 Isolate Unclassified
12 2738543003 Duganella sp. GV066 Isolate Unclassified
13 2738543026 Duganella sp. GV089 Isolate Unclassified
14 2738543029 Duganella sp. GV039 Isolate Unclassified
15 2821131069 Duganella sp. 1224 Isolate Unclassified
16 2842733646 Variovorax sp. R-72446 Isolate Unclassified
17 2846033681 Chromobacterium sinusclupearum MWU13-2610 Isolate Rhizosphere
18 2857547612 Janthinobacterium sp. R-74502 Isolate Unclassified
19 2857564685 Duganella sp. R-74599 Isolate Unclassified
20 2885080285 Janthinobacterium sp. AD80 Isolate Rhizosphere
21 2885192300 Variovorax sp. MHTC-1 Isolate Rhizosphere
22 2932410948 Janthinobacterium lividum 2829 Isolate Rhizosphere
23 2932416698 Janthinobacterium lividum 2830 Isolate Rhizosphere
24 2939631187 Ottowia thiooxydans 2709 Isolate Rhizosphere
25 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
26 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
27 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
28 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
29 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
30 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
31 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
32 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
33 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
34 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
35 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
36 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
37 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
38 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
39 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
40 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
41 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
42 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
43 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
44 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
45 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
46 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
47 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
48 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
49 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
50 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
51 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
52 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
53 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
54 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
55 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
56 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
57 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
58 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
59 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
60 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
61 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
62 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
63 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
64 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
65 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
66 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
67 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
68 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
69 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
70 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
71 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
72 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
73 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
74 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
75 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
76 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
77 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
78 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
79 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
80 3300015683 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_F04 Metagenome Rhizosphere
81 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
82 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
83 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
84 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
85 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
86 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
87 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
88 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
89 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
90 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
91 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
92 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
93 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
94 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
95 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
96 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
97 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
98 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
99 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
100 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
101 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
114 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
115 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
117 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
118 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
119 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
120 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
121 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
122 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
123 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
124 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
125 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
126 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
127 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
128 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
129 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
130 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
131 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
132 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
133 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
134 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
135 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
136 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
137 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
138 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
139 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
140 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
141 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
142 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
143 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
144 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
145 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
146 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
147 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
148 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
149 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
150 3300042000 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z081617_5539 Metagenome Rhizosphere
151 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
152 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
153 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
154 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
155 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
156 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
157 3300042120 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913L_E14_082316_2192 Metagenome Rhizosphere
158 3300042126 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0218F_E14_070516_87 Metagenome Rhizosphere
159 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
160 3300042128 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0117W_E14_070716_123 Metagenome Rhizosphere
161 3300042130 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030L_E14_070516_97 Metagenome Rhizosphere
162 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
163 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
164 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
165 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
166 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
167 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
168 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
169 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
170 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
171 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
172 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
173 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
174 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
175 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
176 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
177 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
178 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
179 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
180 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
181 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
182 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
183 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
184 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
185 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
186 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
187 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
188 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
189 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
190 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
191 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
192 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
193 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
194 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
195 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
196 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
197 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
198 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
199 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
200 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
201 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
202 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
203 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
204 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
205 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
206 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
207 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
208 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
209 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
210 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
211 3300049517 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_B_5_control Metagenome Rhizosphere
212 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
213 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
214 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
215 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
216 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
217 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
218 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
219 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
220 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
221 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
222 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
223 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
224 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
225 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
226 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
227 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
228 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
229 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
230 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
231 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.02
Metatranscriptomes 0
Isolates 6.98

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 25.29
Nodule 0
Rhizoplane 0.58
Rhizosphere 57.56
Stem 0
Stem Tuber 0
Unclassified 16.57

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25155J39150_1000051 3300002704 Bacteria 76772
2 JGI25155J39150_1000172 3300002704 Bacteria 28433
3 JGI25155J39150_1000682 3300002704 Bacteria 6359
4 JGI25156J39149_1000155 3300002705 Bacteria 50271
5 JGI25154J39366_1000170 3300002738 Bacteria 50275
6 JGI25154J39366_1000544 3300002738 Bacteria 18751
7 JGI25157J39369_1000091 3300002741 Bacteria 76837
8 JGI25150J39212_1003037 3300002774 Bacteria 4028
9 JGI25159J45721_1000098 3300002987 Bacteria 41673
10 JGI25159J45721_1001780 3300002987 Bacteria 8635
11 JGI25151J46595_10002443 3300003187 Bacteria 11187
12 JGI25151J46595_10013815 3300003187 Bacteria 3622
13 JGI25151J46595_10030562 3300003187 Bacteria 2116
14 rootL2_10029821 3300003322 Bacteria 4787
15 rootL2_10108928 3300003322 Bacteria 2150
16 JGI25160J50197_1000067 3300003354 Bacteria 113436
17 JGI25161J50226_1000035 3300003374 Bacteria 133666
18 Ga0055529_1000127 3300003763 Bacteria 109148
19 Ga0055526_1002517 3300003771 Bacteria 12330
20 Ga0055526_1004041 3300003771 Bacteria 9014
21 Ga0055526_1005035 3300003771 Bacteria 7724
22 Ga0055537_1000156 3300003773 Bacteria 51559
23 Ga0055537_1000187 3300003773 Bacteria 46437
24 Ga0055537_1000223 3300003773 Bacteria 41876
25 Ga0055537_1000427 3300003773 Bacteria 27480
26 Ga0055537_1008033 3300003773 Bacteria 2473
27 Ga0055524_1000006 3300003775 Bacteria 324702
28 Ga0055536_1009386 3300003781 Bacteria 4046
29 Ga0055534_1000230 3300003784 Bacteria 40350
30 Ga0055534_1000925 3300003784 Bacteria 13262
31 Ga0055528_1001059 3300003790 Bacteria 18161
32 Ga0055530_10000154 3300003791 Bacteria 61878
33 Ga0055530_10017025 3300003791 Bacteria 2291
34 Ga0055540_1000005 3300003792 Bacteria 378126
35 Ga0055531_10000078 3300003794 Bacteria 105599
36 Ga0055531_10014102 3300003794 Bacteria 3628
37 Ga0055543_1000775 3300004625 Bacteria 15884
38 Ga0065165_1006745 3300005262 Bacteria 5885
39 Ga0065165_1041281 3300005262 Bacteria 1370
40 Ga0065165_1049648 3300005262 Bacteria 1199
41 Ga0065707_10089557 3300005295 Bacteria 4339
42 Ga0070658_10083693 3300005327 Bacteria 2623
43 Ga0070660_100020685 3300005339 Bacteria 4841
44 Ga0070669_100080036 3300005353 Bacteria 2431
45 Ga0070671_100003639 3300005355 Bacteria 12069
46 Ga0070667_100545575 3300005367 Bacteria 1065
47 Ga0070679_100247777 3300005530 Bacteria 1738
48 Ga0068855_100000592 3300005563 Bacteria 44394
49 Ga0068855_100061494 3300005563 Bacteria 4388
50 Ga0068857_100222316 3300005577 Bacteria 1725
51 Ga0068856_100107104 3300005614 Bacteria 2790
52 Ga0068856_100125945 3300005614 Bacteria 2565
53 Ga0068861_100010140 3300005719 Bacteria 6533
54 Ga0068863_100055765 3300005841 Bacteria 3742
55 Ga0068858_100035828 3300005842 Bacteria 4602
56 Ga0068860_100247614 3300005843 Bacteria 1735
57 Ga0068862_100063880 3300005844 Bacteria 3168
58 Ga0068862_100151351 3300005844 Bacteria 2065
59 Ga0075363_100013504 3300006048 Bacteria 3962
60 Ga0075366_10009838 3300006195 Bacteria 5348
61 Ga0075366_10020004 3300006195 Bacteria 3881
62 Ga0075370_10013574 3300006353 Bacteria 4334
63 Ga0075430_100008736 3300006846 Bacteria 8550
64 Ga0105244_10002932 3300009036 Bacteria 12590
65 Ga0105240_10065605 3300009093 Bacteria 4506
66 Ga0105240_10078652 3300009093 Bacteria 4061
67 Ga0111539_10021093 3300009094 Bacteria 8022
68 Ga0105242_10222061 3300009176 Bacteria 1689
69 Ga0105238_10035904 3300009551 Bacteria 5039
70 Ga0105238_10285029 3300009551 Bacteria 1634
71 Ga0105249_10016323 3300009553 Bacteria 6588
72 Ga0163162_10781354 3300013306 Bacteria 1073
73 Ga0157375_10164148 3300013308 Bacteria 2365
74 Ga0157380_10001963 3300014326 Bacteria 13692
75 Ga0182008_10002758 3300014497 Bacteria 10894
76 Ga0157379_10482548 3300014968 Bacteria 1147
77 Ga0182006_1000014 3300015261 Bacteria 340159
78 Ga0182007_10000686 3300015262 Bacteria 19385
79 Ga0182005_1000014 3300015265 Bacteria 389763
80 Ga0183362_10003 3300015683 Bacteria 977584
81 Ga0213872_10000002 3300021361 Bacteria 554092
82 Ga0213872_10000079 3300021361 Bacteria 89092
83 Ga0213872_10000437 3300021361 Bacteria 34175
84 Ga0213872_10064802 3300021361 Bacteria 1650
85 Ga0213872_10089264 3300021361 Bacteria 1380
86 Ga0209435_100062 3300025206 Bacteria 77288
87 Ga0207425_1001551 3300025245 Bacteria 9374
88 Ga0207425_1006170 3300025245 Bacteria 3309
89 Ga0209646_1000001 3300025246 Bacteria 3092932
90 Ga0209646_1000052 3300025246 Bacteria 286370
91 Ga0209026_1000224 3300025250 Bacteria 77298
92 Ga0209026_1003959 3300025250 Bacteria 4625
93 Ga0209759_1000013 3300025256 Bacteria 399300
94 Ga0209759_1000514 3300025256 Bacteria 41893
95 Ga0209565_1000006 3300025263 Bacteria 897294
96 Ga0209565_1000246 3300025263 Bacteria 57871
97 Ga0209565_1000345 3300025263 Bacteria 40893
98 Ga0209565_1003658 3300025263 Bacteria 4892
99 Ga0209455_1000051 3300025272 Bacteria 369818
100 Ga0209673_1000004 3300025273 Bacteria 896155
101 Ga0209673_1000043 3300025273 Bacteria 291503
102 Ga0209130_1000241 3300025284 Bacteria 70093
103 Ga0209130_1000623 3300025284 Bacteria 33778
104 Ga0209675_1000006 3300025291 Bacteria 732267
105 Ga0209675_1000309 3300025291 Bacteria 44113
106 Ga0209675_1001121 3300025291 Bacteria 16339
107 Ga0209676_1000007 3300025292 Bacteria 1029371
108 Ga0209676_1007229 3300025292 Bacteria 5281
109 Ga0209025_1001588 3300025294 Bacteria 28622
110 Ga0209025_1003916 3300025294 Bacteria 13410
111 Ga0209025_1004522 3300025294 Bacteria 12001
112 Ga0209564_1000064 3300025295 Bacteria 316431
113 Ga0209564_1000285 3300025295 Bacteria 102585
114 Ga0209564_1001560 3300025295 Bacteria 22537
115 Ga0209564_1004906 3300025295 Bacteria 7928
116 Ga0209758_1016293 3300025297 Bacteria 3785
117 Ga0209050_1000003 3300025298 Bacteria 1609245
118 Ga0209050_1013526 3300025298 Bacteria 3614
119 Ga0209050_1015141 3300025298 Bacteria 3264
120 Ga0209256_1000001 3300025299 Bacteria 2166974
121 Ga0209256_1000179 3300025299 Bacteria 123865
122 Ga0207426_1000247 3300025302 Bacteria 119659
123 Ga0207426_1002083 3300025302 Bacteria 13829
124 Ga0209051_1000003 3300025303 Bacteria 1609245
125 Ga0209051_1007166 3300025303 Bacteria 6141
126 Ga0209257_1000020 3300025304 Bacteria 773356
127 Ga0209257_1000032 3300025304 Bacteria 680354
128 Ga0209257_1005213 3300025304 Bacteria 9318
129 Ga0207705_10007076 3300025909 Bacteria 8275
130 Ga0207695_10263561 3300025913 Bacteria 1620
131 Ga0207657_10043481 3300025919 Bacteria 3956
132 Ga0207652_10213941 3300025921 Bacteria 1736
133 Ga0207681_10070175 3300025923 Bacteria 2439
134 Ga0207694_10132095 3300025924 Bacteria 2002
135 Ga0207667_10018033 3300025949 Bacteria 7928
136 Ga0207658_10483146 3300025986 Bacteria 1101
137 Ga0207702_10031178 3300026078 Bacteria 4443
138 Ga0207702_10073154 3300026078 Bacteria 2955
139 Ga0207676_10090845 3300026095 Bacteria 2507
140 Ga0207674_10332299 3300026116 Bacteria 1470
141 Ga0207675_100017318 3300026118 Bacteria 6728
142 Ga0209974_10020853 3300027876 Bacteria 2172
143 Ga0207428_10011848 3300027907 Bacteria 7683
144 Ga0268265_10032318 3300028380 Bacteria 3791
145 Ga0307517_10000644 3300028786 Bacteria 59773
146 Ga0307515_10000195 3300028794 Bacteria 148138
147 Ga0307515_10000991 3300028794 Bacteria 64898
148 Ga0307515_10013057 3300028794 Bacteria 15557
149 Ga0265332_10000014 3300031238 Bacteria 249035
150 Ga0265327_10000425 3300031251 Bacteria 77143
151 Ga0307513_10000004 3300031456 Bacteria 558931
152 Ga0307513_10000054 3300031456 Bacteria 148887
153 Ga0307513_10123783 3300031456 Bacteria 2546
154 Ga0307509_10000041 3300031507 Bacteria 182302
155 Ga0307408_100000064 3300031548 Bacteria 122509
156 Ga0307408_100000521 3300031548 Bacteria 33246
157 Ga0307508_10001442 3300031616 Bacteria 26756
158 Ga0316576_10150726 3300031727 Bacteria 1752
159 Ga0307405_10008216 3300031731 Bacteria 5278
160 Ga0307518_10021341 3300031838 Bacteria 4658
161 Ga0307412_10047451 3300031911 Bacteria 2821
162 Ga0307416_100176629 3300032002 Bacteria 1996
163 Ga0307414_10003289 3300032004 Bacteria 8614
164 Ga0307411_10000474 3300032005 Bacteria 13958
165 Ga0307411_10010390 3300032005 Bacteria 4959
166 Ga0307510_10009870 3300033180 Bacteria 11360
167 Ga0373948_0001756 3300034817 Bacteria 3082
168 Ga0373940_0002056 3300035088 Bacteria 3821
169 Ga0373939_0000010 3300035114 Bacteria 68491
170 Ga0373956_0140985 3300035119 Bacteria 1131
171 Ga0373960_0013015 3300035121 Bacteria 2078
172 Ga0395899_0000355 3300037312 Bacteria 56049
173 Ga0395899_0000956 3300037312 Bacteria 27045
174 Ga0395899_0007917 3300037312 Bacteria 8185
175 Ga0395899_0063387 3300037312 Bacteria 2719
176 Ga0395899_0140700 3300037312 Bacteria 1717
177 Ga0395900_0016730 3300037418 Bacteria 7481
178 Ga0395900_0168962 3300037418 Bacteria 2227
179 Ga0395900_0416684 3300037418 Bacteria 1304
180 Ga0395900_0471066 3300037418 Bacteria 1209
181 Ga0395898_0001296 3300037466 Bacteria 36599
182 Ga0395898_0017655 3300037466 Bacteria 7284
183 Ga0395905_0021566 3300037471 Bacteria 6090
184 Ga0395905_0022155 3300037471 Bacteria 6010
185 Ga0395905_0097773 3300037471 Bacteria 2756
186 Ga0395905_0159357 3300037471 Bacteria 2121
187 Ga0395901_0003128 3300038443 Bacteria 16623
188 Ga0395901_0003697 3300038443 Bacteria 15427
189 Ga0395901_0026731 3300038443 Bacteria 5924
190 Ga0436361_0049305 3300039447 Bacteria 21131
191 Ga0436361_0313742 3300039447 Bacteria 4571
192 Ga0436361_0594091 3300039447 Bacteria 35115
193 Ga0436361_0948667 3300039447 Bacteria 9918
194 Ga0436361_0998971 3300039447 Bacteria 4431
195 Ga0439436_0000937 3300041404 Bacteria 8032
196 Ga0439436_0046504 3300041404 Bacteria 1233
197 Ga0439447_026803 3300041407 Bacteria 1474
198 Ga0439461_0020188 3300041410 Bacteria 1317
199 Ga0439466_0052040 3300041411 Bacteria 1339
200 Ga0451807_1753838 3300041486 Bacteria 1215
201 Ga0439431_0001180 3300041997 Bacteria 5715
202 Ga0439433_0001961 3300041999 Bacteria 4310
203 Ga0439437_001221 3300042000 Bacteria 2702
204 Ga0439442_005727 3300042002 Bacteria 2489
205 Ga0439445_0000771 3300042004 Bacteria 6714
206 Ga0439432_000167 3300042006 Bacteria 22831
207 Ga0439432_016519 3300042006 Bacteria 2483
208 Ga0439449_0001887 3300042007 Bacteria 8259
209 Ga0439449_0002369 3300042007 Bacteria 7377
210 Ga0439457_011161 3300042014 Bacteria 2050
211 Ga0439457_012401 3300042014 Bacteria 1921
212 Ga0439462_0002288 3300042015 Bacteria 4427
213 Ga0450917_000439 3300042120 Bacteria 3137
214 Ga0450888_000243 3300042126 Bacteria 4987
215 Ga0450890_005317 3300042127 Bacteria 1658
216 Ga0450897_000064 3300042128 Bacteria 4806
217 Ga0450892_000213 3300042130 Bacteria 6912
218 Ga0439434_0001963 3300042435 Bacteria 5952
219 Ga0451577_0008906 3300042876 Bacteria 9714
220 Ga0451577_0009081 3300042876 Bacteria 9593
221 Ga0451577_0258998 3300042876 Bacteria 1575
222 Ga0451577_0556273 3300042876 Bacteria 1041
223 Ga0466972_0000029 3300044658 Bacteria 165236
224 Ga0466965_0002765 3300044683 Bacteria 7537
225 Ga0466965_0005265 3300044683 Bacteria 5817
226 Ga0466964_0108345 3300044706 Bacteria 1235
227 Ga0453684_0027220 3300044712 Bacteria 8208
228 Ga0453684_0071880 3300044712 Bacteria 4371
229 Ga0453684_0078090 3300044712 Bacteria 4145
230 Ga0453684_0218136 3300044712 Bacteria 2211
231 Ga0466968_0105850 3300044735 Bacteria 1260
232 Ga0466970_0075915 3300044765 Bacteria 1810
233 Ga0466959_0031584 3300045049 Bacteria 3918
234 Ga0451576_0002177 3300045051 Bacteria 30313
235 Ga0451576_0030401 3300045051 Bacteria 5772
236 Ga0451576_0108811 3300045051 Bacteria 2884
237 Ga0451576_0160447 3300045051 Bacteria 2346
238 Ga0495592_0001970 3300046454 Bacteria 14493
239 Ga0495638_0004731 3300046460 Bacteria 10275
240 Ga0495638_0019932 3300046460 Bacteria 4434
241 Ga0495638_0064728 3300046460 Bacteria 2252
242 Ga0495650_0004092 3300046471 Bacteria 10185
243 Ga0495584_0000254 3300046491 Bacteria 38075
244 Ga0495585_0012649 3300046492 Bacteria 4967
245 Ga0495585_0048880 3300046492 Bacteria 2351
246 Ga0495607_0005633 3300046501 Bacteria 8928
247 Ga0495583_0051569 3300046506 Bacteria 1875
248 Ga0495606_0000290 3300046507 Bacteria 87022
249 Ga0495606_0002198 3300046507 Bacteria 23385
250 Ga0495606_0007056 3300046507 Bacteria 10175
251 Ga0495610_0002816 3300046512 Bacteria 14177
252 Ga0495610_0006390 3300046512 Bacteria 8124
253 Ga0495610_0159867 3300046512 Bacteria 953
254 Ga0495616_0022809 3300046513 Bacteria 3375
255 Ga0495632_0098549 3300046519 Bacteria 1379
256 Ga0495643_0021424 3300046522 Bacteria 3708
257 Ga0495648_0015095 3300046524 Bacteria 5624
258 Ga0495609_0003914 3300046538 Bacteria 8350
259 Ga0495621_0003078 3300046539 Bacteria 4555
260 Ga0495622_0008817 3300046557 Bacteria 4670
261 Ga0495633_0001171 3300046558 Bacteria 21096
262 Ga0495633_0005790 3300046558 Bacteria 7458
263 Ga0495633_0010187 3300046558 Bacteria 5143
264 Ga0495656_0000141 3300046615 Bacteria 26743
265 Ga0495668_0000049 3300046616 Bacteria 217657
266 Ga0495668_0000177 3300046616 Bacteria 94811
267 Ga0495668_0001394 3300046616 Bacteria 23536
268 Ga0495611_0130407 3300046648 Bacteria 1172
269 Ga0495625_0003184 3300046660 Bacteria 16701
270 Ga0495659_0001441 3300046664 Bacteria 8067
271 Ga0495661_0054738 3300046665 Bacteria 2394
272 Ga0495669_0039054 3300046684 Bacteria 2101
273 Ga0495613_0224548 3300046689 Bacteria 1317
274 Ga0495670_0146225 3300046691 Bacteria 1238
275 Ga0495671_0001262 3300046692 Bacteria 17291
276 Ga0495671_0045798 3300046692 Bacteria 2189
277 Ga0495649_0000166 3300046694 Bacteria 57538
278 Ga0495673_0000027 3300047469 Bacteria 475440
279 Ga0495686_0000539 3300047472 Bacteria 54152
280 Ga0495686_0002547 3300047472 Bacteria 17027
281 Ga0495686_0119957 3300047472 Bacteria 1569
282 Ga0496117_0000001 3300048920 Bacteria 2526244
283 Ga0496118_0000008 3300048921 Bacteria 644537
284 Ga0496118_0027726 3300048921 Bacteria 4785
285 Ga0496118_0086851 3300048921 Bacteria 2172
286 Ga0496121_0059590 3300048924 Bacteria 3146
287 Ga0496121_0076098 3300048924 Bacteria 2677
288 Ga0496121_0274566 3300048924 Bacteria 1156
289 Ga0496122_0000342 3300048925 Bacteria 100753
290 Ga0496122_0002399 3300048925 Bacteria 26741
291 Ga0496123_0000057 3300048926 Bacteria 228608
292 Ga0496123_0005360 3300048926 Bacteria 12945
293 Ga0496124_0082995 3300048927 Bacteria 2630
294 Ga0496125_0032505 3300048928 Bacteria 4634
295 Ga0496126_0144518 3300048929 Bacteria 2044
296 Ga0496126_0352324 3300048929 Bacteria 1204
297 Ga0495682_0027020 3300049460 Bacteria 2130
298 Ga0501294_003158 3300049517 Bacteria 1553
299 Ga0501034_0076282 3300049571 Bacteria 3359
300 Ga0501222_001911 3300049662 Bacteria 2887
301 Ga0501225_0008366 3300049705 Bacteria 2970
302 Ga0501241_008287 3300049758 Bacteria 1899
303 nmdc:mga03683_4751_c1 3300050489 Bacteria 4533
304 nmdc:mga0k408_25582_c1 3300050493 Bacteria 3343
305 nmdc:mga07m45_2655_c1 3300050496 Bacteria 8425
306 nmdc:mga07m45_8862_c1 3300050496 Bacteria 5192
307 nmdc:mga0qj67_5716_c1 3300050509 Bacteria 9098
308 nmdc:mga08y16_4964_c1 3300050511 Bacteria 13905
309 Ga0500644_0001578 3300053088 Bacteria 5974
310 Ga0500583_0039908 3300053092 Bacteria 2124
311 Ga0500651_0002268 3300053093 Bacteria 10089
312 Ga0500593_000195 3300053117 Bacteria 24547
313 Ga0500594_0002004 3300053118 Bacteria 4402
314 Ga0500618_003964 3300053125 Bacteria 4896
315 Ga0500559_0000109 3300053136 Bacteria 65246
316 Ga0500619_070179 3300053154 Bacteria 1164
317 Ga0500636_0080713 3300053177 Bacteria 1874
318 Ga0500637_0013265 3300053178 Bacteria 4317
319 Ga0500645_000336 3300053730 Bacteria 33456
320 Ga0500645_040569 3300053730 Bacteria 1376

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300003322 rootL2_10108928 rootL2_101089282 265
2 3300041410 Ga0439461_0020188 Ga0439461_0020188_29_826 265
3 3300046512 Ga0495610_0159867 Ga0495610_0159867_130_942 269
4 3300005327 Ga0070658_10083693 Ga0070658_100836934 288
5 3300009094 Ga0111539_10021093 Ga0111539_100210932 288
6 3300027907 Ga0207428_10011848 Ga0207428_100118487 288
7 3300050511 nmdc:mga08y16_4964_c1 nmdc:mga08y16_4964_c1_6229_7173 288
8 3300009093 Ga0105240_10065605 Ga0105240_100656052 290
9 3300014326 Ga0157380_10001963 Ga0157380_100019633 290
10 3300021361 Ga0213872_10000079 Ga0213872_1000007914 290
11 3300039447 Ga0436361_0049305 Ga0436361_0049305_4995_5924 290
12 3300015262 Ga0182007_10000686 Ga0182007_1000068615 292
13 3300006846 Ga0075430_100008736 Ga0075430_1000087367 293
14 3300048921 Ga0496118_0027726 Ga0496118_0027726_1762_2682 293
15 3300050509 nmdc:mga0qj67_5716_c1 nmdc:mga0qj67_5716_c1_2857_3789 293
16 3300013306 Ga0163162_10781354 Ga0163162_107813541 294
17 3300025919 Ga0207657_10043481 Ga0207657_100434815 294
18 3300031727 Ga0316576_10150726 Ga0316576_101507262 294
19 3300035088 Ga0373940_0002056 Ga0373940_0002056_905_1792 294
20 3300046460 Ga0495638_0004731 Ga0495638_0004731_8206_9126 294
21 3300046660 Ga0495625_0003184 Ga0495625_0003184_9825_10745 294
22 3300003781 Ga0055536_1009386 Ga0055536_10093862 296
23 3300003791 Ga0055530_10000154 Ga0055530_1000015427 296
24 3300046557 Ga0495622_0008817 Ga0495622_0008817_3543_4490 296
25 3300046558 Ga0495633_0001171 Ga0495633_0001171_15562_16509 296
26 3300049460 Ga0495682_0027020 Ga0495682_0027020_973_1920 296
27 3300005295 Ga0065707_10089557 Ga0065707_100895573 297
28 3300006195 Ga0075366_10020004 Ga0075366_100200043 297
29 3300046492 Ga0495585_0048880 Ga0495585_0048880_98_1072 297
30 3300046558 Ga0495633_0010187 Ga0495633_0010187_3792_4766 297
31 3300046691 Ga0495670_0146225 Ga0495670_0146225_184_1158 297
32 3300048924 Ga0496121_0059590 Ga0496121_0059590_927_1874 297
33 3300002987 JGI25159J45721_1001780 JGI25159J45721_10017805 298
34 3300003187 JGI25151J46595_10013815 JGI25151J46595_100138154 298
35 3300003771 Ga0055526_1004041 Ga0055526_10040416 298
36 3300003773 Ga0055537_1000187 Ga0055537_100018715 298
37 3300003775 Ga0055524_1000006 Ga0055524_100000643 298
38 3300003784 Ga0055534_1000925 Ga0055534_10009259 298
39 3300003792 Ga0055540_1000005 Ga0055540_1000005270 298
40 3300003794 Ga0055531_10014102 Ga0055531_100141024 298
41 3300005719 Ga0068861_100010140 Ga0068861_1000101407 298
42 3300009036 Ga0105244_10002932 Ga0105244_1000293210 298
43 3300025245 Ga0207425_1006170 Ga0207425_10061702 298
44 3300025263 Ga0209565_1000246 Ga0209565_100024636 298
45 3300025273 Ga0209673_1000043 Ga0209673_1000043134 298
46 3300025284 Ga0209130_1000623 Ga0209130_100062327 298
47 3300025291 Ga0209675_1000309 Ga0209675_100030945 298
48 3300025292 Ga0209676_1000007 Ga0209676_1000007429 298
49 3300025292 Ga0209676_1007229 Ga0209676_10072295 298
50 3300025294 Ga0209025_1004522 Ga0209025_10045224 298
51 3300025295 Ga0209564_1000285 Ga0209564_100028527 298
52 3300025298 Ga0209050_1000003 Ga0209050_10000031079 298
53 3300025299 Ga0209256_1000001 Ga0209256_10000011085 298
54 3300025302 Ga0207426_1002083 Ga0207426_100208311 298
55 3300025303 Ga0209051_1000003 Ga0209051_10000031079 298
56 3300025304 Ga0209257_1000020 Ga0209257_1000020429 298
57 3300025304 Ga0209257_1005213 Ga0209257_10052138 298
58 3300026118 Ga0207675_100017318 Ga0207675_1000173181 298
59 3300014497 Ga0182008_10002758 Ga0182008_100027583 299
60 3300015261 Ga0182006_1000014 Ga0182006_10000148 299
61 3300015265 Ga0182005_1000014 Ga0182005_10000149 299
62 3300034817 Ga0373948_0001756 Ga0373948_0001756_1389_2291 299
63 3300035114 Ga0373939_0000010 Ga0373939_0000010_29961_30863 299
64 3300035121 Ga0373960_0013015 Ga0373960_0013015_861_1763 299
65 3300048920 Ga0496117_0000001 Ga0496117_0000001_2518237_2519184 299
66 3300048921 Ga0496118_0000008 Ga0496118_0000008_636530_637477 299
67 3300048924 Ga0496121_0076098 Ga0496121_0076098_147_1094 299
68 3300048928 Ga0496125_0032505 Ga0496125_0032505_2589_3536 299
69 iso_pu_bacteria 2643221544 2643746526 299
70 3300005563 Ga0068855_100061494 Ga0068855_1000614944 300
71 3300005842 Ga0068858_100035828 Ga0068858_1000358284 300
72 3300048925 Ga0496122_0002399 Ga0496122_0002399_15922_16869 300
73 3300048926 Ga0496123_0005360 Ga0496123_0005360_2229_3176 300
74 3300049758 Ga0501241_008287 Ga0501241_008287_949_1872 300
75 3300053730 Ga0500645_040569 Ga0500645_040569_138_1040 300
76 3300002704 JGI25155J39150_1000172 JGI25155J39150_100017217 301
77 3300002738 JGI25154J39366_1000544 JGI25154J39366_100054414 301
78 3300025246 Ga0209646_1000052 Ga0209646_1000052240 301
79 3300025250 Ga0209026_1003959 Ga0209026_10039592 301
80 3300025256 Ga0209759_1000514 Ga0209759_10005142 301
81 3300046492 Ga0495585_0012649 Ga0495585_0012649_161_1135 301
82 3300046507 Ga0495606_0007056 Ga0495606_0007056_7036_7989 301
83 3300046648 Ga0495611_0130407 Ga0495611_0130407_160_1134 301
84 3300048924 Ga0496121_0274566 Ga0496121_0274566_50_1009 301
85 3300053178 Ga0500637_0013265 Ga0500637_0013265_1845_2753 301
86 3300025263 Ga0209565_1003658 Ga0209565_10036583 302
87 3300046507 Ga0495606_0002198 Ga0495606_0002198_22102_23070 302
88 3300046512 Ga0495610_0006390 Ga0495610_0006390_2043_3011 302
89 3300005530 Ga0070679_100247777 Ga0070679_1002477772 303
90 3300006353 Ga0075370_10013574 Ga0075370_100135742 303
91 3300028794 Ga0307515_10000195 Ga0307515_1000019556 303
92 3300031731 Ga0307405_10008216 Ga0307405_100082164 303
93 3300031911 Ga0307412_10047451 Ga0307412_100474511 303
94 3300032005 Ga0307411_10010390 Ga0307411_100103905 303
95 3300041404 Ga0439436_0000937 Ga0439436_0000937_2548_3477 303
96 3300041404 Ga0439436_0046504 Ga0439436_0046504_39_968 303
97 3300041407 Ga0439447_026803 Ga0439447_026803_17_946 303
98 3300041411 Ga0439466_0052040 Ga0439466_0052040_341_1270 303
99 3300041997 Ga0439431_0001180 Ga0439431_0001180_61_990 303
100 3300041999 Ga0439433_0001961 Ga0439433_0001961_1783_2712 303
101 3300042000 Ga0439437_001221 Ga0439437_001221_1313_2227 303
102 3300042002 Ga0439442_005727 Ga0439442_005727_402_1331 303
103 3300042004 Ga0439445_0000771 Ga0439445_0000771_2345_3274 303
104 3300042006 Ga0439432_000167 Ga0439432_000167_13122_14051 303
105 3300042006 Ga0439432_016519 Ga0439432_016519_776_1705 303
106 3300042007 Ga0439449_0001887 Ga0439449_0001887_5670_6599 303
107 3300042007 Ga0439449_0002369 Ga0439449_0002369_2534_3463 303
108 3300042014 Ga0439457_011161 Ga0439457_011161_1007_1936 303
109 3300042014 Ga0439457_012401 Ga0439457_012401_526_1455 303
110 3300042015 Ga0439462_0002288 Ga0439462_0002288_576_1505 303
111 3300042120 Ga0450917_000439 Ga0450917_000439_288_1202 303
112 3300042126 Ga0450888_000243 Ga0450888_000243_2965_3879 303
113 3300042127 Ga0450890_005317 Ga0450890_005317_146_1060 303
114 3300042128 Ga0450897_000064 Ga0450897_000064_3659_4588 303
115 3300042130 Ga0450892_000213 Ga0450892_000213_4306_5220 303
116 3300042435 Ga0439434_0001963 Ga0439434_0001963_3919_4848 303
117 3300046471 Ga0495650_0004092 Ga0495650_0004092_3751_4668 303
118 3300050489 nmdc:mga03683_4751_c1 nmdc:mga03683_4751_c1_2973_3902 303
119 3300050496 nmdc:mga07m45_8862_c1 nmdc:mga07m45_8862_c1_390_1319 303
120 iso_pu_bacteria 2643221639 2644220910 303
121 iso_pu_bacteria 2643221646 2644259754 303
122 iso_pu_bacteria 2885192300 2885196152 303
123 3300009093 Ga0105240_10078652 Ga0105240_100786523 304
124 3300009551 Ga0105238_10035904 Ga0105238_100359043 304
125 3300028794 Ga0307515_10013057 Ga0307515_100130579 304
126 3300031838 Ga0307518_10021341 Ga0307518_100213418 304
127 3300032004 Ga0307414_10003289 Ga0307414_100032892 304
128 3300032005 Ga0307411_10000474 Ga0307411_100004743 304
129 3300037471 Ga0395905_0021566 Ga0395905_0021566_2746_3723 304
130 3300042876 Ga0451577_0556273 Ga0451577_0556273_99_1028 304
131 iso_pu_bacteria 2643221585 2643935446 304
132 iso_pu_bacteria 2643221656 2644317228 304
133 iso_pu_bacteria 2738541337 2739057338 304
134 iso_pu_bacteria 2939631187 2939632812 304
135 3300003794 Ga0055531_10000078 Ga0055531_1000007848 305
136 3300005262 Ga0065165_1049648 Ga0065165_10496482 305
137 3300005339 Ga0070660_100020685 Ga0070660_1000206854 305
138 3300005614 Ga0068856_100107104 Ga0068856_1001071042 305
139 3300025303 Ga0209051_1007166 Ga0209051_10071664 305
140 3300025304 Ga0209257_1000032 Ga0209257_1000032308 305
141 3300025921 Ga0207652_10213941 Ga0207652_102139412 305
142 3300026078 Ga0207702_10073154 Ga0207702_100731543 305
143 3300031548 Ga0307408_100000064 Ga0307408_10000006459 305
144 3300032002 Ga0307416_100176629 Ga0307416_1001766292 305
145 3300044712 Ga0453684_0071880 Ga0453684_0071880_2010_2954 305
146 3300044765 Ga0466970_0075915 Ga0466970_0075915_115_1056 305
147 3300045049 Ga0466959_0031584 Ga0466959_0031584_2335_3276 305
148 3300045051 Ga0451576_0030401 Ga0451576_0030401_2941_3870 305
149 3300049517 Ga0501294_003158 Ga0501294_003158_14_943 305
150 3300049662 Ga0501222_001911 Ga0501222_001911_1816_2745 305
151 3300049705 Ga0501225_0008366 Ga0501225_0008366_1762_2691 305
152 3300005367 Ga0070667_100545575 Ga0070667_1005455751 306
153 3300005577 Ga0068857_100222316 Ga0068857_1002223162 306
154 3300005841 Ga0068863_100055765 Ga0068863_1000557652 306
155 3300005843 Ga0068860_100247614 Ga0068860_1002476141 306
156 3300005844 Ga0068862_100063880 Ga0068862_1000638802 306
157 3300025986 Ga0207658_10483146 Ga0207658_104831461 306
158 3300026116 Ga0207674_10332299 Ga0207674_103322992 306
159 3300028380 Ga0268265_10032318 Ga0268265_100323183 306
160 3300044683 Ga0466965_0005265 Ga0466965_0005265_2557_3513 306
161 3300046689 Ga0495613_0224548 Ga0495613_0224548_105_1058 306
162 iso_pu_bacteria 2738541297 2738825466 306
163 iso_pu_bacteria 2738541357 2739149263 306
164 iso_pu_bacteria 2738543003 2739191182 306
165 iso_pu_bacteria 2738543026 2739317659 306
166 iso_pu_bacteria 2738543029 2739335900 306
167 iso_pu_bacteria 2821131069 2821134060 306
168 iso_pu_bacteria 2857564685 2857565876 306
169 3300003322 rootL2_10029821 rootL2_100298216 307
170 3300003763 Ga0055529_1000127 Ga0055529_100012722 307
171 3300005844 Ga0068862_100151351 Ga0068862_1001513513 307
172 3300009553 Ga0105249_10016323 Ga0105249_100163234 307
173 3300025272 Ga0209455_1000051 Ga0209455_1000051201 307
174 3300046507 Ga0495606_0000290 Ga0495606_0000290_44423_45370 307
175 3300046512 Ga0495610_0002816 Ga0495610_0002816_2449_3396 307
176 3300046522 Ga0495643_0021424 Ga0495643_0021424_127_1068 307
177 3300046524 Ga0495648_0015095 Ga0495648_0015095_4489_5430 307
178 3300046558 Ga0495633_0005790 Ga0495633_0005790_5879_6826 307
179 3300046616 Ga0495668_0000177 Ga0495668_0000177_39805_40752 307
180 3300046616 Ga0495668_0001394 Ga0495668_0001394_16226_17173 307
181 3300046692 Ga0495671_0001262 Ga0495671_0001262_632_1579 307
182 3300047469 Ga0495673_0000027 Ga0495673_0000027_239464_240411 307
183 3300047472 Ga0495686_0002547 Ga0495686_0002547_2030_2977 307
184 3300048927 Ga0496124_0082995 Ga0496124_0082995_567_1514 307
185 3300048929 Ga0496126_0144518 Ga0496126_0144518_506_1453 307
186 3300053125 Ga0500618_003964 Ga0500618_003964_1809_2756 307
187 iso_pu_bacteria 2600255292 2601670625 307
188 iso_pu_bacteria 2857547612 2857548030 307
189 iso_pu_bacteria 2885080285 2885082071 307
190 3300014968 Ga0157379_10482548 Ga0157379_104825482 308
191 3300021361 Ga0213872_10064802 Ga0213872_100648022 308
192 3300025909 Ga0207705_10007076 Ga0207705_100070764 308
193 3300031548 Ga0307408_100000521 Ga0307408_10000052130 308
194 3300037312 Ga0395899_0000956 Ga0395899_0000956_12331_13275 308
195 3300037312 Ga0395899_0063387 Ga0395899_0063387_1008_1946 308
196 3300037418 Ga0395900_0016730 Ga0395900_0016730_2291_3229 308
197 3300037418 Ga0395900_0168962 Ga0395900_0168962_736_1674 308
198 3300037466 Ga0395898_0017655 Ga0395898_0017655_2486_3424 308
199 3300037471 Ga0395905_0022155 Ga0395905_0022155_4601_5539 308
200 3300038443 Ga0395901_0003128 Ga0395901_0003128_6058_7002 308
201 3300038443 Ga0395901_0026731 Ga0395901_0026731_556_1494 308
202 3300039447 Ga0436361_0313742 Ga0436361_0313742_1742_2683 308
203 3300042876 Ga0451577_0008906 Ga0451577_0008906_2919_3863 308
204 3300046539 Ga0495621_0003078 Ga0495621_0003078_2980_3975 308
205 3300046615 Ga0495656_0000141 Ga0495656_0000141_17221_18216 308
206 3300049571 Ga0501034_0076282 Ga0501034_0076282_1312_2256 308
207 3300002704 JGI25155J39150_1000682 JGI25155J39150_10006826 309
208 3300003771 Ga0055526_1005035 Ga0055526_10050356 309
209 3300003773 Ga0055537_1000156 Ga0055537_10001562 309
210 3300003773 Ga0055537_1000223 Ga0055537_100022341 309
211 3300003773 Ga0055537_1000427 Ga0055537_100042722 309
212 3300003784 Ga0055534_1000230 Ga0055534_100023036 309
213 3300003790 Ga0055528_1001059 Ga0055528_10010597 309
214 3300009176 Ga0105242_10222061 Ga0105242_102220611 309
215 3300009551 Ga0105238_10285029 Ga0105238_102850292 309
216 3300015683 Ga0183362_10003 Ga0183362_10003130 309
217 3300021361 Ga0213872_10089264 Ga0213872_100892641 309
218 3300025263 Ga0209565_1000006 Ga0209565_1000006218 309
219 3300025273 Ga0209673_1000004 Ga0209673_1000004611 309
220 3300025291 Ga0209675_1000006 Ga0209675_1000006217 309
221 3300025295 Ga0209564_1000064 Ga0209564_100006460 309
222 3300025299 Ga0209256_1000179 Ga0209256_100017996 309
223 3300027876 Ga0209974_10020853 Ga0209974_100208532 309
224 3300028794 Ga0307515_10000991 Ga0307515_1000099128 309
225 3300031251 Ga0265327_10000425 Ga0265327_1000042559 309
226 3300039447 Ga0436361_0998971 Ga0436361_0998971_2100_3035 309
227 3300046454 Ga0495592_0001970 Ga0495592_0001970_9770_10714 309
228 3300046460 Ga0495638_0019932 Ga0495638_0019932_1260_2210 309
229 3300046491 Ga0495584_0000254 Ga0495584_0000254_490_1440 309
230 3300046501 Ga0495607_0005633 Ga0495607_0005633_4235_5185 309
231 3300046506 Ga0495583_0051569 Ga0495583_0051569_365_1315 309
232 3300046513 Ga0495616_0022809 Ga0495616_0022809_2254_3204 309
233 3300046538 Ga0495609_0003914 Ga0495609_0003914_6168_7118 309
234 3300046616 Ga0495668_0000049 Ga0495668_0000049_123384_124337 309
235 3300046664 Ga0495659_0001441 Ga0495659_0001441_6941_7891 309
236 3300046665 Ga0495661_0054738 Ga0495661_0054738_186_1136 309
237 3300046684 Ga0495669_0039054 Ga0495669_0039054_337_1287 309
238 3300046692 Ga0495671_0045798 Ga0495671_0045798_146_1096 309
239 3300046694 Ga0495649_0000166 Ga0495649_0000166_824_1774 309
240 3300047472 Ga0495686_0000539 Ga0495686_0000539_7742_8695 309
241 3300053154 Ga0500619_070179 Ga0500619_070179_157_1101 309
242 iso_pu_bacteria 2511231003 2511248122 309
243 3300006048 Ga0075363_100013504 Ga0075363_1000135045 310
244 3300006195 Ga0075366_10009838 Ga0075366_100098383 310
245 3300044683 Ga0466965_0002765 Ga0466965_0002765_6299_7249 310
246 3300044712 Ga0453684_0078090 Ga0453684_0078090_2358_3299 310
247 3300044735 Ga0466968_0105850 Ga0466968_0105850_96_1046 310
248 3300050493 nmdc:mga0k408_25582_c1 nmdc:mga0k408_25582_c1_862_1797 310
249 3300050496 nmdc:mga07m45_2655_c1 nmdc:mga07m45_2655_c1_6577_7512 310
250 iso_pu_bacteria 2842733646 2842736219 310
251 iso_pu_bacteria 2846033681 2846036338 310
252 3300005353 Ga0070669_100080036 Ga0070669_1000800363 311
253 3300021361 Ga0213872_10000002 Ga0213872_10000002489 311
254 3300025923 Ga0207681_10070175 Ga0207681_100701752 311
255 3300028786 Ga0307517_10000644 Ga0307517_1000064457 311
256 3300031456 Ga0307513_10123783 Ga0307513_101237832 311
257 3300031507 Ga0307509_10000041 Ga0307509_1000004115 311
258 3300031616 Ga0307508_10001442 Ga0307508_100014429 311
259 3300033180 Ga0307510_10009870 Ga0307510_100098702 311
260 3300039447 Ga0436361_0594091 Ga0436361_0594091_14730_15686 311
261 3300046460 Ga0495638_0064728 Ga0495638_0064728_983_1939 311
262 3300046519 Ga0495632_0098549 Ga0495632_0098549_20_976 311
263 3300047472 Ga0495686_0119957 Ga0495686_0119957_402_1358 311
264 3300048925 Ga0496122_0000342 Ga0496122_0000342_33745_34689 311
265 3300048926 Ga0496123_0000057 Ga0496123_0000057_170154_171098 311
266 3300048929 Ga0496126_0352324 Ga0496126_0352324_38_994 311
267 3300053092 Ga0500583_0039908 Ga0500583_0039908_312_1274 311
268 3300053118 Ga0500594_0002004 Ga0500594_0002004_708_1664 311
269 3300053136 Ga0500559_0000109 Ga0500559_0000109_61422_62378 311
270 3300053177 Ga0500636_0080713 Ga0500636_0080713_794_1750 311
271 iso_pu_bacteria 2932410948 2932412621 311
272 iso_pu_bacteria 2932416698 2932420136 311
273 3300003771 Ga0055526_1002517 Ga0055526_10025173 312
274 3300005563 Ga0068855_100000592 Ga0068855_10000059243 312
275 3300005614 Ga0068856_100125945 Ga0068856_1001259453 312
276 3300025295 Ga0209564_1001560 Ga0209564_100156024 312
277 3300025913 Ga0207695_10263561 Ga0207695_102635612 312
278 3300025924 Ga0207694_10132095 Ga0207694_101320952 312
279 3300025949 Ga0207667_10018033 Ga0207667_100180334 312
280 3300026078 Ga0207702_10031178 Ga0207702_100311783 312
281 3300048921 Ga0496118_0086851 Ga0496118_0086851_1024_1992 312
282 3300005355 Ga0070671_100003639 Ga0070671_1000036396 313
283 3300026095 Ga0207676_10090845 Ga0207676_100908452 313
284 3300037312 Ga0395899_0007917 Ga0395899_0007917_1728_2699 313
285 3300037471 Ga0395905_0097773 Ga0395905_0097773_1104_2075 313
286 3300042876 Ga0451577_0009081 Ga0451577_0009081_8058_9056 313
287 3300044658 Ga0466972_0000029 Ga0466972_0000029_158711_159670 313
288 3300044706 Ga0466964_0108345 Ga0466964_0108345_34_993 313
289 3300044712 Ga0453684_0027220 Ga0453684_0027220_6320_7318 313
290 3300045051 Ga0451576_0108811 Ga0451576_0108811_1559_2512 313
291 3300045051 Ga0451576_0160447 Ga0451576_0160447_475_1473 313
292 3300013308 Ga0157375_10164148 Ga0157375_101641483 314
293 3300037418 Ga0395900_0471066 Ga0395900_0471066_106_1074 314
294 3300042876 Ga0451577_0258998 Ga0451577_0258998_410_1447 314
295 3300037312 Ga0395899_0140700 Ga0395899_0140700_650_1642 315
296 3300031456 Ga0307513_10000004 Ga0307513_10000004447 316
297 3300035119 Ga0373956_0140985 Ga0373956_0140985_104_1090 316
298 3300037312 Ga0395899_0000355 Ga0395899_0000355_6615_7589 316
299 3300037418 Ga0395900_0416684 Ga0395900_0416684_118_1092 316
300 3300037466 Ga0395898_0001296 Ga0395898_0001296_35413_36387 316
301 3300037471 Ga0395905_0159357 Ga0395905_0159357_671_1681 316
302 3300038443 Ga0395901_0003697 Ga0395901_0003697_4589_5563 316
303 3300041486 Ga0451807_1753838 Ga0451807_1753838_14_991 316
304 iso_pu_bacteria 2511231002 2511245676 317
305 3300003187 JGI25151J46595_10002443 JGI25151J46595_100024434 318
306 3300005262 Ga0065165_1006745 Ga0065165_10067453 318
307 3300021361 Ga0213872_10000437 Ga0213872_1000043736 318
308 3300025294 Ga0209025_1003916 Ga0209025_100391612 318
309 3300025295 Ga0209564_1004906 Ga0209564_10049061 318
310 3300025298 Ga0209050_1013526 Ga0209050_10135262 318
311 3300039447 Ga0436361_0948667 Ga0436361_0948667_482_1489 318
312 3300044712 Ga0453684_0218136 Ga0453684_0218136_960_2012 318
313 3300045051 Ga0451576_0002177 Ga0451576_0002177_8409_9461 318
314 3300002987 JGI25159J45721_1000098 JGI25159J45721_100009832 319
315 3300003354 JGI25160J50197_1000067 JGI25160J50197_100006742 319
316 3300003374 JGI25161J50226_1000035 JGI25161J50226_100003563 319
317 3300003791 Ga0055530_10017025 Ga0055530_100170252 319
318 3300004625 Ga0055543_1000775 Ga0055543_10007753 319
319 3300005262 Ga0065165_1041281 Ga0065165_10412812 319
320 3300025284 Ga0209130_1000241 Ga0209130_100024142 319
321 3300025298 Ga0209050_1015141 Ga0209050_10151413 319
322 3300025302 Ga0207426_1000247 Ga0207426_100024776 319
323 3300053093 Ga0500651_0002268 Ga0500651_0002268_1991_3001 319
324 3300031238 Ga0265332_10000014 Ga0265332_1000001456 320
325 3300031456 Ga0307513_10000054 Ga0307513_1000005477 320
326 3300002774 JGI25150J39212_1003037 JGI25150J39212_10030372 321
327 3300003187 JGI25151J46595_10030562 JGI25151J46595_100305622 321
328 3300003773 Ga0055537_1008033 Ga0055537_10080332 321
329 3300025245 Ga0207425_1001551 Ga0207425_10015516 321
330 3300025263 Ga0209565_1000345 Ga0209565_100034518 321
331 3300025291 Ga0209675_1001121 Ga0209675_100112110 321
332 3300025294 Ga0209025_1001588 Ga0209025_100158811 321
333 3300025297 Ga0209758_1016293 Ga0209758_10162934 321
334 3300053730 Ga0500645_000336 Ga0500645_000336_19132_20100 321
335 3300053088 Ga0500644_0001578 Ga0500644_0001578_770_1738 322
336 3300053117 Ga0500593_000195 Ga0500593_000195_1191_2159 322
337 3300002704 JGI25155J39150_1000051 JGI25155J39150_100005116 326
338 3300002705 JGI25156J39149_1000155 JGI25156J39149_100015541 326
339 3300002738 JGI25154J39366_1000170 JGI25154J39366_100017040 326
340 3300002741 JGI25157J39369_1000091 JGI25157J39369_100009116 326
341 3300025206 Ga0209435_100062 Ga0209435_10006265 326
342 3300025246 Ga0209646_1000001 Ga0209646_1000001354 326
343 3300025250 Ga0209026_1000224 Ga0209026_100022465 326
344 3300025256 Ga0209759_1000013 Ga0209759_1000013354 326

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01715

IPPT

IPP transferase

51

321

0.92

PF01745

IPT

Isopentenyl transferase

16

84

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
2zm5-assembly1.cif.gz_A crystal structure of trna modification enzyme miaa in the complex with trna(phe) 0.9324 3 310
3crr-assembly1.cif.gz_A structure of trna dimethylallyltransferase: rna modification through a channel 0.9228 1 312
2zm5-assembly1.cif.gz_A crystal structure of trna modification enzyme miaa in the complex with trna(phe) 0.9176 3 310
3crr-assembly1.cif.gz_A structure of trna dimethylallyltransferase: rna modification through a channel 0.9007 1 312
2qgn-assembly1.cif.gz_A crystal structure of trna isopentenylpyrophosphate transferase (bh2366) from bacillus halodurans, northeast structural genomics consortium target bhr41. 0.8944 3 316
ID Description Score Start End Superfamily
af_P16384_121_194_1.10.20.140 Mainly Alpha;Orthogonal Bundle;Histone, subunit A; 0.9973 115 180 1.10.20.140
3crrA02 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 0.9557 208 288 1.10.287.890
3crrA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9545 1 112 3.40.50.300
2zm5B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.933 4 310 3.40.50.300
3exaA03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 0.9248 206 287 1.10.287.890
ID Description Score Start End GO Terms
AF-A0A7H4PQY9-F1-model_v4 tRNA dimethylallyltransferase (EC 2.5.1.75) 0.9876 43 169 GO:0005524
GO:0006400
GO:0052381
AF-A0A6M1HZG2-F1-model_v4 deleted 0.9826 3 147
AF-A0A5C9B6K1-F1-model_v4 tRNA dimethylallyltransferase (EC 2.5.1.75) 0.9819 3 132 GO:0005524
GO:0006400
GO:0052381
AF-A0A0F9T3R4-F1-model_v4 tRNA dimethylallyltransferase (EC 2.5.1.75) 0.9758 4 120 GO:0005524
GO:0006400
GO:0052381
AF-A0A3D0W7X5-F1-model_v4 tRNA dimethylallyltransferase (EC 2.5.1.75) 0.9751 1 180 GO:0005524
GO:0006400
GO:0052381

Feature Viewer

pLDDT pTM Quality
90.56 0.82 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map