F412882

General Info

Members Datasets Scaffolds Average Seq Length
336 250 672 216

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2867302475|2867305444
Length 253
Sequence AGVERPVTGEAGVERPATGEAGVERPVTGEVGGPGRPVRVMIVDDHPMWREGVARDLTEAGHLVVATSGEGRQAVRVAPAARPDVVVLDLQLPDISGVAVIQGLREALPDVRVLMLSASGEQQSVLDAVKAGATGYLVKSAAPAEFLDAVRRTAAGEPVFTPGLAGLVLGEYRRLAATPAGPAGSSPGETPRLTERETEVLRLVAKGLSYKQVAQRLGLSHRTVQNHVQNTLGKLQLHNRVELTRYAIERGLD

Samples

Sample ID Description Type Environment
1 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
11 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
12 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
13 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
14 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
15 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
16 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
17 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
18 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
19 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
20 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
21 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
22 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
23 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
24 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
25 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
26 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
27 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
28 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
29 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
30 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
34 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
35 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
36 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
37 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
38 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
39 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
40 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
41 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
42 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
43 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
44 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
45 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
64 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
65 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
66 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
67 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
68 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
69 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
70 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
71 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
72 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
73 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
74 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
75 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
76 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
77 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
78 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
79 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
80 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
81 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
82 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
83 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
84 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
85 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
86 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
87 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
88 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
89 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
90 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
91 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
92 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
93 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
94 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
95 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
96 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
97 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
98 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
99 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
100 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
101 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
102 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
103 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
104 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
105 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
106 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
107 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
108 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
109 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
110 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
111 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
112 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
113 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
114 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
115 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
116 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
117 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
118 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
119 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
120 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
121 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
122 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
123 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
124 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
125 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
126 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
127 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
128 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
129 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
130 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
131 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
132 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
133 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
134 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
135 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
136 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
137 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
138 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
139 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
140 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
141 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
142 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
143 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
144 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
145 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
146 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
147 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
148 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
149 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
150 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
151 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
152 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
153 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
154 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
155 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
156 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
157 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
162 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
168 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
169 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
170 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
171 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
172 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
173 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
174 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
175 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
176 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
177 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
178 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
179 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
180 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
181 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
182 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
183 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
184 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
185 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
186 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
187 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
188 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
189 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
190 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
191 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
192 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
193 2501939600 Micromonospora sp. L5 Isolate Unclassified
194 2523231044 Gordonia rhizosphera NBRC 16068 Isolate Rhizosphere
195 2565956761 Rhodococcus qingshengii BKS 20-40 Isolate Rhizosphere
196 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
197 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
198 2643221670 Streptomyces sp. Root431 Isolate Unclassified
199 2643221692 Nocardia sp. Root136 Isolate Unclassified
200 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
201 2738541308 Rhodococcus sp. OK551 Isolate Unclassified
202 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
203 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
204 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
205 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
206 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
207 2842888712 Tsukamurella sp. R-71941 Isolate Unclassified
208 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
209 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
210 2855683550 Micromonospora sp. RP3T Isolate Unclassified
211 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
212 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
213 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
214 2858868258 Micromonospora sp. MH33 Isolate Unclassified
215 2858882152 Micromonospora noduli MED15 Isolate Nodule
216 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
217 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
218 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
219 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
220 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
221 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
222 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
223 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
224 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
225 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
226 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
227 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
228 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
229 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
230 2902582711 Micromonospora sp. AP08 Isolate Unclassified
231 2904535858 Rhodococcus erythropolis 2017 Isolate Unclassified
232 2904765812 Rhodococcus fascians 1590 Isolate Rhizosphere
233 2904770941 Rhodococcus fascians 1339 Isolate Rhizosphere
234 2908811453 Rhodococcus sp. 1R11 Isolate Unclassified
235 2919420072 Rhodococcus fascians 3241 Isolate Rhizosphere
236 2919432681 Rhodococcus sp. 3258 Isolate Rhizosphere
237 2922554459 Rhodococcus sp. 66b Isolate Unclassified
238 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
239 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
240 2974315732 Rhodococcus sp. SORGH_AS 301 Isolate Unclassified
241 2984523437 Rhodococcus sp. SORGH_AS303 Isolate Aerial Root
242 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
243 649633069 Micromonospora sp. L5 Isolate Unclassified
244 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
245 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
246 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
247 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
248 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
249 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
250 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 82.44
Metatranscriptomes 0
Isolates 17.56

Biome Distribution

Category Percentage (%)
Aerial Root 0.3
Bulb 0
Endosphere 4.46
Nodule 1.79
Rhizoplane 6.85
Rhizosphere 70.83
Stem 0
Stem Tuber 0
Unclassified 0.3

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10084749 3300001979 Bacteria 825
2 JGI24739J22299_10062399 3300001989 Bacteria 1175
3 JGI25406J46586_10015928 3300003203 Bacteria 3152
4 Ga0070683_100124689 3300005329 Bacteria 2434
5 Ga0070683_100303658 3300005329 Bacteria 1519
6 Ga0068869_100352601 3300005334 Bacteria 1200
7 Ga0068869_100395722 3300005334 Bacteria 1135
8 Ga0068868_100425018 3300005338 Bacteria 1151
9 Ga0070661_100199612 3300005344 Bacteria 1528
10 Ga0070668_100078935 3300005347 Bacteria 2576
11 Ga0070668_100376622 3300005347 Bacteria 1207
12 Ga0070667_100031333 3300005367 Bacteria 4434
13 Ga0070667_100268207 3300005367 Bacteria 1530
14 Ga0068867_101050628 3300005459 Bacteria 741
15 Ga0070684_100102901 3300005535 Bacteria 2554
16 Ga0068855_100332988 3300005563 Bacteria 1675
17 Ga0070664_100524435 3300005564 Bacteria 1094
18 Ga0068857_100066299 3300005577 Bacteria 3212
19 Ga0068857_100844738 3300005577 Bacteria 876
20 Ga0068852_100005864 3300005616 Bacteria 8828
21 Ga0068852_100467084 3300005616 Bacteria 1252
22 Ga0068859_100830033 3300005617 Bacteria 1011
23 Ga0068859_101058391 3300005617 Bacteria 892
24 Ga0068863_100323176 3300005841 Bacteria 1499
25 Ga0068858_100363211 3300005842 Bacteria 1388
26 Ga0068858_100585885 3300005842 Bacteria 1081
27 Ga0068862_100026225 3300005844 Bacteria 4899
28 Ga0081539_10001605 3300005985 Bacteria 37235
29 Ga0081539_10066261 3300005985 Bacteria 1958
30 Ga0070717_10000433 3300006028 Bacteria 26697
31 Ga0075365_10214307 3300006038 Bacteria 1350
32 Ga0075365_10302255 3300006038 Bacteria 1126
33 Ga0075363_100007156 3300006048 Bacteria 5109
34 Ga0075364_10038946 3300006051 Bacteria 3081
35 Ga0075370_10010036 3300006353 Bacteria 4939
36 Ga0075370_10085684 3300006353 Bacteria 1814
37 Ga0075428_100023535 3300006844 Bacteria 6819
38 Ga0075430_100061610 3300006846 Bacteria 3152
39 Ga0075431_100029872 3300006847 Bacteria 5611
40 Ga0075429_100016696 3300006880 Bacteria 6358
41 Ga0097620_100830018 3300006931 Bacteria 1011
42 Ga0097620_101058608 3300006931 Bacteria 892
43 Ga0105240_10312611 3300009093 Bacteria 1793
44 Ga0114129_10001011 3300009147 Bacteria 36664
45 Ga0114129_10024039 3300009147 Bacteria 8634
46 Ga0105243_10657055 3300009148 Bacteria 1017
47 Ga0105241_11071577 3300009174 Bacteria 757
48 Ga0105242_11246300 3300009176 Bacteria 765
49 Ga0105237_10141782 3300009545 Bacteria 2397
50 Ga0105238_10428804 3300009551 Bacteria 1318
51 Ga0105249_10371378 3300009553 Bacteria 1454
52 Ga0105246_10265385 3300011119 Bacteria 1370
53 Ga0157369_10315219 3300013105 Bacteria 1626
54 Ga0157369_10473997 3300013105 Bacteria 1295
55 Ga0157369_10818426 3300013105 Bacteria 956
56 Ga0157375_10041364 3300013308 Bacteria 4450
57 Ga0157375_10513587 3300013308 Bacteria 1362
58 Ga0163163_10209645 3300014325 Bacteria 1997
59 Ga0163163_10399307 3300014325 Bacteria 1433
60 Ga0163163_11509578 3300014325 Bacteria 733
61 Ga0163161_10266727 3300017792 Bacteria 1339
62 Ga0213875_10023636 3300021388 Bacteria 2935
63 Ga0213875_10131270 3300021388 Bacteria 1171
64 Ga0207642_10234811 3300025899 Bacteria 1032
65 Ga0207647_10137791 3300025904 Bacteria 1431
66 Ga0207657_10134549 3300025919 Bacteria 2024
67 Ga0207670_10777807 3300025936 Bacteria 796
68 Ga0207691_10249850 3300025940 Bacteria 1531
69 Ga0207689_10109162 3300025942 Bacteria 2273
70 Ga0207679_10168989 3300025945 Bacteria 1798
71 Ga0207679_10578325 3300025945 Bacteria 1010
72 Ga0207668_10008100 3300025972 Bacteria 6257
73 Ga0207668_11177667 3300025972 Bacteria 688
74 Ga0207658_10213384 3300025986 Bacteria 1619
75 Ga0207677_10233244 3300026023 Bacteria 1484
76 Ga0207703_10015391 3300026035 Bacteria 5966
77 Ga0207703_10456783 3300026035 Bacteria 1194
78 Ga0207702_10334067 3300026078 Bacteria 1446
79 Ga0207676_10124290 3300026095 Bacteria 2182
80 Ga0207674_10077690 3300026116 Bacteria 3325
81 Ga0207674_10122895 3300026116 Bacteria 2562
82 Ga0207674_10124218 3300026116 Bacteria 2547
83 Ga0207675_100567205 3300026118 Bacteria 1136
84 Ga0207683_10445490 3300026121 Bacteria 1193
85 Ga0207698_10003773 3300026142 Bacteria 9159
86 Ga0207698_10286370 3300026142 Bacteria 1526
87 Ga0268265_10040304 3300028380 Bacteria 3449
88 Ga0265323_10083526 3300028653 Bacteria 1076
89 Ga0307515_10078895 3300028794 Bacteria 4322
90 Ga0307515_10085905 3300028794 Bacteria 4019
91 Ga0307511_10190080 3300030521 Bacteria 1087
92 Ga0307512_10002479 3300030522 Bacteria 23236
93 Ga0307512_10023281 3300030522 Bacteria 5538
94 Ga0307512_10034620 3300030522 Bacteria 4318
95 Ga0265329_10113663 3300031242 Unclassified 866
96 Ga0307513_10011772 3300031456 Bacteria 10845
97 Ga0307508_10000654 3300031616 Bacteria 41574
98 Ga0307508_10032614 3300031616 Bacteria 4705
99 Ga0307508_10124988 3300031616 Bacteria 2175
100 Ga0307514_10127010 3300031649 Bacteria 1765
101 Ga0307514_10130991 3300031649 Bacteria 1726
102 Ga0307405_10021791 3300031731 Bacteria 3609
103 Ga0307405_10044833 3300031731 Bacteria 2706
104 Ga0307413_10135548 3300031824 Bacteria 1692
105 Ga0307410_10229233 3300031852 Bacteria 1433
106 Ga0307410_10503479 3300031852 Bacteria 997
107 Ga0326468_10000315 3300031889 Bacteria 5132
108 Ga0307406_10016821 3300031901 Bacteria 4254
109 Ga0307407_10099100 3300031903 Bacteria 1804
110 Ga0307409_100029891 3300031995 Bacteria 3906
111 Ga0307409_100087457 3300031995 Bacteria 2540
112 Ga0307409_100432664 3300031995 Bacteria 1265
113 Ga0307416_100008924 3300032002 Bacteria 6516
114 Ga0307416_100204384 3300032002 Bacteria 1877
115 Ga0307416_100770835 3300032002 Bacteria 1056
116 Ga0307416_100883605 3300032002 Bacteria 993
117 Ga0307414_10619544 3300032004 Bacteria 973
118 Ga0307415_100292850 3300032126 Bacteria 1344
119 Ga0307415_101158975 3300032126 Bacteria 726
120 Ga0373948_0006283 3300034817 Bacteria 1960
121 Ga0373940_0003883 3300035088 Bacteria 3105
122 Ga0373939_0183004 3300035114 Bacteria 783
123 Ga0373942_0000977 3300035207 Bacteria 7773
124 Ga0373962_0029910 3300035242 Bacteria 1487
125 Ga0373935_0028908 3300035692 Bacteria 3428
126 Ga0395900_0181189 3300037418 Bacteria 2141
127 Ga0395905_0380741 3300037471 Bacteria 1305
128 Ga0436364_1001322 3300037853 Bacteria 4697
129 Ga0395901_0111617 3300038443 Bacteria 2871
130 Ga0395901_0390240 3300038443 Bacteria 1431
131 Ga0395901_0648229 3300038443 Bacteria 1060
132 Ga0439459_0006797 3300042438 Bacteria 1917
133 Ga0466969_0106540 3300044656 Bacteria 1315
134 Ga0466969_0145960 3300044656 Bacteria 1092
135 Ga0466972_0030867 3300044658 Bacteria 2638
136 Ga0466972_0034968 3300044658 Bacteria 2459
137 Ga0466972_0074805 3300044658 Bacteria 1614
138 Ga0466965_0105834 3300044683 Bacteria 1442
139 Ga0466965_0142075 3300044683 Bacteria 1251
140 Ga0466965_0273152 3300044683 Bacteria 911
141 Ga0466966_0046118 3300044684 Bacteria 2784
142 Ga0466961_0002543 3300044693 Bacteria 11299
143 Ga0466961_0014821 3300044693 Bacteria 5009
144 Ga0466961_0121305 3300044693 Bacteria 1641
145 Ga0466963_0065565 3300044694 Bacteria 2435
146 Ga0466963_0203467 3300044694 Bacteria 1385
147 Ga0466963_0255926 3300044694 Bacteria 1229
148 Ga0466971_0030738 3300044719 Bacteria 2404
149 Ga0466968_0067054 3300044735 Bacteria 1556
150 Ga0466970_0197065 3300044765 Bacteria 1120
151 Ga0466970_0362567 3300044765 Bacteria 823
152 Ga0466957_0082737 3300044842 Bacteria 2001
153 Ga0466957_0197152 3300044842 Bacteria 1321
154 Ga0466960_0009453 3300044901 Bacteria 4019
155 Ga0466958_0005512 3300045836 Bacteria 6825
156 Ga0466958_0038759 3300045836 Bacteria 2860
157 Ga0466958_0337259 3300045836 Bacteria 970
158 Ga0466958_0448463 3300045836 Bacteria 835
159 Ga0466967_0051314 3300045976 Bacteria 3614
160 Ga0466967_0341432 3300045976 Bacteria 1448
161 Ga0495617_012947 3300046452 Bacteria 2842
162 Ga0495590_0017091 3300046457 Bacteria 2616
163 Ga0495638_0068643 3300046460 Bacteria 2173
164 Ga0495638_0185419 3300046460 Bacteria 1184
165 Ga0495641_0048457 3300046461 Bacteria 1948
166 Ga0495584_0261776 3300046491 Bacteria 879
167 Ga0495585_0023809 3300046492 Bacteria 3513
168 Ga0495594_0261055 3300046499 Bacteria 986
169 Ga0495596_0009301 3300046500 Bacteria 4326
170 Ga0495583_0030731 3300046506 Bacteria 2612
171 Ga0495583_0033839 3300046506 Bacteria 2454
172 Ga0495606_0006317 3300046507 Bacteria 10976
173 Ga0495610_0014994 3300046512 Bacteria 4524
174 Ga0495616_0001639 3300046513 Bacteria 15348
175 Ga0495620_0059986 3300046515 Bacteria 1587
176 Ga0495628_0054552 3300046516 Bacteria 3150
177 Ga0495631_0005423 3300046518 Bacteria 6674
178 Ga0495632_0044751 3300046519 Bacteria 2208
179 Ga0495632_0079239 3300046519 Bacteria 1568
180 Ga0495643_0008762 3300046522 Bacteria 6376
181 Ga0495666_0006627 3300046526 Bacteria 5822
182 Ga0495654_0020576 3300046530 Bacteria 3437
183 Ga0495609_0008738 3300046538 Bacteria 4936
184 Ga0495621_0085692 3300046539 Bacteria 1181
185 Ga0495597_0006275 3300046542 Bacteria 6159
186 Ga0495633_0009428 3300046558 Bacteria 5394
187 Ga0495668_0000204 3300046616 Bacteria 86683
188 Ga0495668_0025156 3300046616 Bacteria 3384
189 Ga0495668_0156654 3300046616 Bacteria 1247
190 Ga0495625_0045640 3300046660 Bacteria 3166
191 Ga0495661_0021331 3300046665 Bacteria 4224
192 Ga0495613_0240301 3300046689 Bacteria 1266
193 Ga0495670_0067784 3300046691 Bacteria 1802
194 Ga0495660_0062490 3300046810 Bacteria 1996
195 Ga0495604_0118247 3300047317 Bacteria 1921
196 Ga0495636_0011300 3300047318 Bacteria 3533
197 Ga0495636_0020544 3300047318 Bacteria 2661
198 Ga0495676_0113598 3300047321 Bacteria 1982
199 Ga0495687_002506 3300047443 Bacteria 14592
200 Ga0495687_019481 3300047443 Bacteria 3328
201 Ga0495687_082962 3300047443 Bacteria 1249
202 Ga0495687_108366 3300047443 Bacteria 1026
203 Ga0495685_002593 3300047447 Bacteria 5694
204 Ga0495685_050746 3300047447 Bacteria 1408
205 Ga0495685_099708 3300047447 Bacteria 959
206 Ga0495681_0038701 3300047470 Bacteria 2335
207 Ga0495686_0048742 3300047472 Bacteria 2669
208 Ga0495614_0065781 3300048089 Bacteria 1559
209 Ga0495626_0009599 3300048091 Bacteria 5221
210 Ga0496100_0253232 3300048903 Bacteria 1303
211 Ga0496101_0021917 3300048904 Bacteria 4391
212 Ga0496101_0243206 3300048904 Bacteria 1401
213 Ga0496101_0301496 3300048904 Bacteria 1255
214 Ga0496102_0068048 3300048905 Bacteria 3267
215 Ga0496102_0497769 3300048905 Bacteria 1141
216 Ga0496104_0219154 3300048907 Bacteria 1815
217 Ga0496105_0184409 3300048908 Bacteria 1708
218 Ga0496106_0073483 3300048909 Bacteria 2616
219 Ga0496108_0000010 3300048911 Bacteria 273269
220 Ga0496108_0042002 3300048911 Bacteria 3816
221 Ga0496108_0073360 3300048911 Bacteria 2889
222 Ga0496108_0098090 3300048911 Bacteria 2497
223 Ga0496108_0184644 3300048911 Bacteria 1806
224 Ga0496108_0747528 3300048911 Bacteria 846
225 Ga0496109_0027143 3300048912 Bacteria 5110
226 Ga0496109_0120153 3300048912 Bacteria 2447
227 Ga0496109_1102612 3300048912 Bacteria 731
228 Ga0496111_0351253 3300048914 Bacteria 1091
229 Ga0496112_0018584 3300048915 Bacteria 6549
230 Ga0496113_0183273 3300048916 Bacteria 1660
231 Ga0496114_0097534 3300048917 Bacteria 2504
232 Ga0496114_0178547 3300048917 Bacteria 1853
233 Ga0496125_0116423 3300048928 Bacteria 1919
234 Ga0495678_038891 3300049459 Bacteria 1921
235 Ga0501033_0001891 3300049570 Bacteria 18219
236 Ga0501034_0001622 3300049571 Bacteria 29187
237 Ga0501036_0001540 3300049572 Bacteria 17817
238 Ga0501038_0009782 3300049574 Bacteria 8784
239 Ga0501039_0092553 3300049575 Bacteria 2356
240 Ga0501039_0343829 3300049575 Bacteria 1172
241 Ga0501040_0459096 3300049576 Bacteria 917
242 Ga0501041_0099160 3300049577 Bacteria 1802
243 Ga0501042_0100209 3300049578 Bacteria 2083
244 Ga0501043_0001089 3300049579 Bacteria 23889
245 Ga0501047_0203031 3300049581 Bacteria 1842
246 Ga0501048_0104042 3300049582 Bacteria 2004
247 Ga0501067_0049878 3300049583 Bacteria 2319
248 Ga0501068_0066860 3300049584 Bacteria 2189
249 Ga0501068_0376308 3300049584 Bacteria 914
250 Ga0501069_0009109 3300049585 Bacteria 5238
251 Ga0501069_0056611 3300049585 Bacteria 2185
252 Ga0501071_0560495 3300049587 Bacteria 878
253 Ga0501074_0003195 3300049590 Bacteria 11555
254 Ga0501035_0004035 3300049822 Bacteria 13982
255 Ga0501044_0115565 3300049823 Bacteria 2689
256 Ga0501045_0188412 3300049824 Bacteria 1537
257 nmdc:mga03n38_16870_c1 3300050490 Bacteria 2849
258 nmdc:mga00v17_161373_c1 3300050491 Bacteria 1443
259 nmdc:mga0yw44_268671_c1 3300050492 Bacteria 1138
260 nmdc:mga07m45_13049_c1 3300050496 Bacteria 4398
261 nmdc:mga05p37_2329_c1 3300050507 Bacteria 22115
262 nmdc:mga05p37_26667_c1 3300050507 Bacteria 7027
263 nmdc:mga09592_25692_c1 3300050508 Bacteria 4876
264 nmdc:mga0qj67_696161_c1 3300050509 Bacteria 809
265 nmdc:mga06r32_485960_c1 3300050510 Bacteria 1213
266 Ga0500644_0083051 3300053088 Bacteria 1182
267 Ga0500650_0125574 3300053098 Bacteria 1194
268 Ga0500594_0040323 3300053118 Bacteria 1274
269 Ga0500652_003049 3300053131 Bacteria 5056
270 Ga0500559_0125687 3300053136 Bacteria 1195
271 Ga0501082_0196335 3300060353 Bacteria 1756
272 Ga0466962_0020466 3300061719 Bacteria 3179
273 Ga0466962_0028459 3300061719 Bacteria 2677
274 Ga0466962_0196362 3300061719 Bacteria 985
275 Ga0466962_0202591 3300061719 Bacteria 970
276 Ga0466962_0358158 3300061719 Bacteria 727
277 Ga0530510_0028758 3300061734 Bacteria 3985
278 2867305444 2867302475 Bacteria 7087181
279 2501940368 2501939600 Bacteria 6907073
280 2523386416 2523231044 Bacteria 6434991
281 2566996208 2565956761 Bacteria 6601618
282 2616694292 2616644814 Bacteria 11555299
283 2623591579 2622736626 Bacteria 7181580
284 2644387379 2643221670 Bacteria 6497041
285 2644517941 2643221692 Bacteria 7282860
286 2676481224 2675903059 Bacteria 8644972
287 2738890701 2738541308 Bacteria 7020677
288 2753267431 2751185782 Bacteria 11227053
289 2772645771 2772190715 Bacteria 6959372
290 2816428120 2816332119 Bacteria 8120218
291 2831938465 2831935698 Bacteria 5963223
292 2832007142 2832004796 Bacteria 6538017
293 2842890336 2842888712 Bacteria 4279094
294 2855670551 2855670206 Bacteria 7120389
295 2855683528 2855676851 Bacteria 7063653
296 2855687319 2855683550 Bacteria 7134265
297 2856858629 2856858025 Bacteria 7255264
298 2857288897 2857288857 Bacteria 7189066
299 2858854275 2858848962 Bacteria 6963058
300 2858874403 2858868258 Bacteria 7683772
301 2858887256 2858882152 Bacteria 7230291
302 2858892084 2858888857 Bacteria 7060307
303 2858897776 2858895516 Bacteria 7378898
304 2858903166 2858902515 Bacteria 7086037
305 2861520821 2861520306 Bacteria 8348283
306 2866069901 2866065130 Bacteria 6518152
307 2867351288 2867346516 Bacteria 7608576
308 2867512208 2867507094 Bacteria 6506033
309 2869052093 2869048445 Bacteria 6875584
310 2869065156 2869061728 Bacteria 7112407
311 2869070535 2869068681 Bacteria 7205615
312 2880495510 2880489317 Bacteria 7096270
313 2880496846 2880495981 Bacteria 7340502
314 2887482381 2887478801 Bacteria 8972725
315 2895438038 2895427314 Bacteria 13147766
316 2902583833 2902582711 Bacteria 6187705
317 2904540844 2904535858 Bacteria 6308016
318 2904769011 2904765812 Bacteria 5369154
319 2904771710 2904770941 Bacteria 5580202
320 2908811799 2908811453 Bacteria 5478616
321 2919420126 2919420072 Bacteria 5390363
322 2919434115 2919432681 Bacteria 5390474
323 2922554935 2922554459 Bacteria 6683962
324 2929225468 2929219909 Bacteria 6984360
325 2929231557 2929226422 Bacteria 7248583
326 2974320057 2974315732 Bacteria 4602776
327 2984523924 2984523437 Bacteria 4508481
328 2996223955 2996221748 Bacteria 6799777
329 649813189 649633069 Bacteria 6962533
330 8003835916 8003830390 Bacteria 6541657
331 8003863437 8003856774 Bacteria 7675274
332 8008580073 8008574985 Bacteria 7815457
333 8054704468 8054704163 Bacteria 7247792
334 8054734428 8054727385 Bacteria 7558670
335 8054740191 8054734606 Bacteria 6947278
336 8055415625 8055412473 Bacteria 6257500
337 JGI24740J21852_10084749
338 JGI24739J22299_10062399
339 JGI25406J46586_10015928
340 Ga0070683_100124689
341 Ga0070683_100303658
342 Ga0068869_100352601
343 Ga0068869_100395722
344 Ga0068868_100425018
345 Ga0070661_100199612
346 Ga0070668_100078935
347 Ga0070668_100376622
348 Ga0070667_100031333
349 Ga0070667_100268207
350 Ga0068867_101050628
351 Ga0070684_100102901
352 Ga0068855_100332988
353 Ga0070664_100524435
354 Ga0068857_100066299
355 Ga0068857_100844738
356 Ga0068852_100005864
357 Ga0068852_100467084
358 Ga0068859_100830033
359 Ga0068859_101058391
360 Ga0068863_100323176
361 Ga0068858_100363211
362 Ga0068858_100585885
363 Ga0068862_100026225
364 Ga0081539_10001605
365 Ga0081539_10066261
366 Ga0070717_10000433
367 Ga0075365_10214307
368 Ga0075365_10302255
369 Ga0075363_100007156
370 Ga0075364_10038946
371 Ga0075370_10010036
372 Ga0075370_10085684
373 Ga0075428_100023535
374 Ga0075430_100061610
375 Ga0075431_100029872
376 Ga0075429_100016696
377 Ga0097620_100830018
378 Ga0097620_101058608
379 Ga0105240_10312611
380 Ga0114129_10001011
381 Ga0114129_10024039
382 Ga0105243_10657055
383 Ga0105241_11071577
384 Ga0105242_11246300
385 Ga0105237_10141782
386 Ga0105238_10428804
387 Ga0105249_10371378
388 Ga0105246_10265385
389 Ga0157369_10315219
390 Ga0157369_10473997
391 Ga0157369_10818426
392 Ga0157375_10041364
393 Ga0157375_10513587
394 Ga0163163_10209645
395 Ga0163163_10399307
396 Ga0163163_11509578
397 Ga0163161_10266727
398 Ga0213875_10023636
399 Ga0213875_10131270
400 Ga0207642_10234811
401 Ga0207647_10137791
402 Ga0207657_10134549
403 Ga0207670_10777807
404 Ga0207691_10249850
405 Ga0207689_10109162
406 Ga0207679_10168989
407 Ga0207679_10578325
408 Ga0207668_10008100
409 Ga0207668_11177667
410 Ga0207658_10213384
411 Ga0207677_10233244
412 Ga0207703_10015391
413 Ga0207703_10456783
414 Ga0207702_10334067
415 Ga0207676_10124290
416 Ga0207674_10077690
417 Ga0207674_10122895
418 Ga0207674_10124218
419 Ga0207675_100567205
420 Ga0207683_10445490
421 Ga0207698_10003773
422 Ga0207698_10286370
423 Ga0268265_10040304
424 Ga0265323_10083526
425 Ga0307515_10078895
426 Ga0307515_10085905
427 Ga0307511_10190080
428 Ga0307512_10002479
429 Ga0307512_10023281
430 Ga0307512_10034620
431 Ga0265329_10113663
432 Ga0307513_10011772
433 Ga0307508_10000654
434 Ga0307508_10032614
435 Ga0307508_10124988
436 Ga0307514_10127010
437 Ga0307514_10130991
438 Ga0307405_10021791
439 Ga0307405_10044833
440 Ga0307413_10135548
441 Ga0307410_10229233
442 Ga0307410_10503479
443 Ga0326468_10000315
444 Ga0307406_10016821
445 Ga0307407_10099100
446 Ga0307409_100029891
447 Ga0307409_100087457
448 Ga0307409_100432664
449 Ga0307416_100008924
450 Ga0307416_100204384
451 Ga0307416_100770835
452 Ga0307416_100883605
453 Ga0307414_10619544
454 Ga0307415_100292850
455 Ga0307415_101158975
456 Ga0373948_0006283
457 Ga0373940_0003883
458 Ga0373939_0183004
459 Ga0373942_0000977
460 Ga0373962_0029910
461 Ga0373935_0028908
462 Ga0395900_0181189
463 Ga0395905_0380741
464 Ga0436364_1001322
465 Ga0395901_0111617
466 Ga0395901_0390240
467 Ga0395901_0648229
468 Ga0439459_0006797
469 Ga0466969_0106540
470 Ga0466969_0145960
471 Ga0466972_0030867
472 Ga0466972_0034968
473 Ga0466972_0074805
474 Ga0466965_0105834
475 Ga0466965_0142075
476 Ga0466965_0273152
477 Ga0466966_0046118
478 Ga0466961_0002543
479 Ga0466961_0014821
480 Ga0466961_0121305
481 Ga0466963_0065565
482 Ga0466963_0203467
483 Ga0466963_0255926
484 Ga0466971_0030738
485 Ga0466968_0067054
486 Ga0466970_0197065
487 Ga0466970_0362567
488 Ga0466957_0082737
489 Ga0466957_0197152
490 Ga0466960_0009453
491 Ga0466958_0005512
492 Ga0466958_0038759
493 Ga0466958_0337259
494 Ga0466958_0448463
495 Ga0466967_0051314
496 Ga0466967_0341432
497 Ga0495617_012947
498 Ga0495590_0017091
499 Ga0495638_0068643
500 Ga0495638_0185419
501 Ga0495641_0048457
502 Ga0495584_0261776
503 Ga0495585_0023809
504 Ga0495594_0261055
505 Ga0495596_0009301
506 Ga0495583_0030731
507 Ga0495583_0033839
508 Ga0495606_0006317
509 Ga0495610_0014994
510 Ga0495616_0001639
511 Ga0495620_0059986
512 Ga0495628_0054552
513 Ga0495631_0005423
514 Ga0495632_0044751
515 Ga0495632_0079239
516 Ga0495643_0008762
517 Ga0495666_0006627
518 Ga0495654_0020576
519 Ga0495609_0008738
520 Ga0495621_0085692
521 Ga0495597_0006275
522 Ga0495633_0009428
523 Ga0495668_0000204
524 Ga0495668_0025156
525 Ga0495668_0156654
526 Ga0495625_0045640
527 Ga0495661_0021331
528 Ga0495613_0240301
529 Ga0495670_0067784
530 Ga0495660_0062490
531 Ga0495604_0118247
532 Ga0495636_0011300
533 Ga0495636_0020544
534 Ga0495676_0113598
535 Ga0495687_002506
536 Ga0495687_019481
537 Ga0495687_082962
538 Ga0495687_108366
539 Ga0495685_002593
540 Ga0495685_050746
541 Ga0495685_099708
542 Ga0495681_0038701
543 Ga0495686_0048742
544 Ga0495614_0065781
545 Ga0495626_0009599
546 Ga0496100_0253232
547 Ga0496101_0021917
548 Ga0496101_0243206
549 Ga0496101_0301496
550 Ga0496102_0068048
551 Ga0496102_0497769
552 Ga0496104_0219154
553 Ga0496105_0184409
554 Ga0496106_0073483
555 Ga0496108_0000010
556 Ga0496108_0042002
557 Ga0496108_0073360
558 Ga0496108_0098090
559 Ga0496108_0184644
560 Ga0496108_0747528
561 Ga0496109_0027143
562 Ga0496109_0120153
563 Ga0496109_1102612
564 Ga0496111_0351253
565 Ga0496112_0018584
566 Ga0496113_0183273
567 Ga0496114_0097534
568 Ga0496114_0178547
569 Ga0496125_0116423
570 Ga0495678_038891
571 Ga0501033_0001891
572 Ga0501034_0001622
573 Ga0501036_0001540
574 Ga0501038_0009782
575 Ga0501039_0092553
576 Ga0501039_0343829
577 Ga0501040_0459096
578 Ga0501041_0099160
579 Ga0501042_0100209
580 Ga0501043_0001089
581 Ga0501047_0203031
582 Ga0501048_0104042
583 Ga0501067_0049878
584 Ga0501068_0066860
585 Ga0501068_0376308
586 Ga0501069_0009109
587 Ga0501069_0056611
588 Ga0501071_0560495
589 Ga0501074_0003195
590 Ga0501035_0004035
591 Ga0501044_0115565
592 Ga0501045_0188412
593 nmdc:mga03n38_16870_c1
594 nmdc:mga00v17_161373_c1
595 nmdc:mga0yw44_268671_c1
596 nmdc:mga07m45_13049_c1
597 nmdc:mga05p37_2329_c1
598 nmdc:mga05p37_26667_c1
599 nmdc:mga09592_25692_c1
600 nmdc:mga0qj67_696161_c1
601 nmdc:mga06r32_485960_c1
602 Ga0500644_0083051
603 Ga0500650_0125574
604 Ga0500594_0040323
605 Ga0500652_003049
606 Ga0500559_0125687
607 Ga0501082_0196335
608 Ga0466962_0020466
609 Ga0466962_0028459
610 Ga0466962_0196362
611 Ga0466962_0202591
612 Ga0466962_0358158
613 Ga0530510_0028758
614 2867305444
615 2501940368
616 2523386416
617 2566996208
618 2616694292
619 2623591579
620 2644387379
621 2644517941
622 2676481224
623 2738890701
624 2753267431
625 2772645771
626 2816428120
627 2831938465
628 2832007142
629 2842890336
630 2855670551
631 2855683528
632 2855687319
633 2856858629
634 2857288897
635 2858854275
636 2858874403
637 2858887256
638 2858892084
639 2858897776
640 2858903166
641 2861520821
642 2866069901
643 2867351288
644 2867512208
645 2869052093
646 2869065156
647 2869070535
648 2880495510
649 2880496846
650 2887482381
651 2895438038
652 2902583833
653 2904540844
654 2904769011
655 2904771710
656 2908811799
657 2919420126
658 2919434115
659 2922554935
660 2929225468
661 2929231557
662 2974320057
663 2984523924
664 2996223955
665 649813189
666 8003835916
667 8003863437
668 8008580073
669 8054704468
670 8054734428
671 8054740191
672 8055415625

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00072

Response_reg

Response regulator receiver domain

40

151

0.98

PF00196

GerE

Bacterial regulatory proteins, luxR family

191

247

0.98

PF04545

Sigma70_r4

Sigma-70, region 4

191

237

0.95

PF08281

Sigma70_r4_2

Sigma-70, region 4

191

235

0.93

PF13384

HTH_23

Homeodomain-like domain

191

234

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
6ekh-assembly1.cif.gz_Y crystal structure of activated chey from methanoccocus maripaludis 0.9539 1 112
7od9-assembly1.cif.gz_B crystal structure of activated chey fused to the c-terminal domain of chef 0.9526 1 116
6c40-assembly1.cif.gz_D-2 chey41pytyrd54k from thermotoga maritima 0.9478 1 117
4qyw-assembly1.cif.gz_A structure of phosphono-chey from t.maritima 0.9444 1 117
3eul-assembly2.cif.gz_B structure of the signal receiver domain of the putative response regulator narl from mycobacterium tuberculosis 0.9385 2 120
ID Description Score Start End Superfamily
6ekhY00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9539 1 112 3.40.50.2300
4tmyB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9489 1 117 3.40.50.2300
3eulC00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.935 1 118 3.40.50.2300
4tmyB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9335 1 117 3.40.50.2300
3dzdB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9318 3 120 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A6I5G8E4-F1-model_v4 deleted 0.9731 2 124
AF-G2PZ02-F1-model_v4 Response regulator receiver protein 0.9667 1 115 GO:0000160
AF-S0FNQ2-F1-model_v4 Stage 0 sporulation protein A homolog 0.965 1 119 GO:0000160
AF-A0A4Q6C3U4-F1-model_v4 Response regulator 0.9629 1 120 GO:0000160
GO:0003677
AF-A0A1R3WLZ2-F1-model_v4 Two-component system, chemotaxis family, response regulator CheY 0.9626 1 119 GO:0000160

Map