F410815

General Info

Members Datasets Scaffolds Average Seq Length
332 201 665 220

Family's Representative Sequence

Representative Sequence 3300005355|Ga0070671_100239582|Ga0070671_1002395821
Length 251
Sequence MPNSFPTDRSQQPHGQSGCAAAQAATKGYAQVHVVIMGCGRVGSQLAHSLESRGHSIAVIDSDADAFRRLGPDFAGTTITGVGFDREVLIAAGIERADGFAAVSSGDNSNIISARLARETFGVKHVVARIYDAKRAEVYERLGIPTVATVRWTADRMMRHLIPDRQELWRDPTSTISIVEVPVHAGWVGRSLKELEEATGARIAYIMRFGIGTLPTASTMIQEGDQVFMLVTDEMIDPVSTISGSPAEGGH

Samples

Sample ID Description Type Environment
1 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
19 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
22 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
23 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
24 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
25 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
26 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
27 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
28 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
29 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
30 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
31 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
32 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
34 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
35 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
36 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
37 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
38 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
39 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
40 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
41 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
42 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
43 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
44 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
69 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
70 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
71 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
72 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
73 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
74 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
75 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
76 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
77 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
78 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
79 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
80 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
81 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
82 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
83 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
84 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
85 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
86 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
87 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
88 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
89 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
90 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
91 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
92 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
93 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
94 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
95 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
96 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
97 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
98 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
99 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
100 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
101 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
102 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
103 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
104 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
105 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
106 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
107 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
108 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
109 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
110 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
111 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
112 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
113 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
114 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
115 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
116 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
117 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
118 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
119 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
120 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
121 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
122 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
123 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
124 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
125 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
126 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
127 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
128 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
129 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
130 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
131 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
146 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
147 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
148 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
149 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
152 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
153 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
154 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
155 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
156 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
157 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
158 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
159 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
160 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
161 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
162 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
163 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
164 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
165 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
166 2501939600 Micromonospora sp. L5 Isolate Unclassified
167 2622736605 Geodermatophilus ruber DSM 45317 Isolate Rhizosphere
168 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
169 2738543011 Rhodococcus sp. OK611 Isolate Unclassified
170 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
171 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
172 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
173 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
174 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
175 2855683550 Micromonospora sp. RP3T Isolate Unclassified
176 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
177 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
178 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
179 2858868258 Micromonospora sp. MH33 Isolate Unclassified
180 2858882152 Micromonospora noduli MED15 Isolate Nodule
181 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
182 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
183 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
184 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
185 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
186 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
187 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
188 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
189 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
190 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
191 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
192 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
193 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
194 2902582711 Micromonospora sp. AP08 Isolate Unclassified
195 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
196 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
197 649633069 Micromonospora sp. L5 Isolate Unclassified
198 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
199 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
200 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
201 8054734606 Micromonospora hortensis NIE111 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 88.25
Metatranscriptomes 0.9
Isolates 10.84

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.11
Nodule 1.51
Rhizoplane 3.61
Rhizosphere 77.11
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070671_100239582 3300005355 Bacteria 1540
2 JGI25406J46586_10008797 3300003203 Bacteria 4547
3 JGI25406J46586_10024215 3300003203 Bacteria 2384
4 JGI25406J46586_10027644 3300003203 Bacteria 2172
5 rootH1_10040086 3300003316 Bacteria 1051
6 rootH1_10040086 3300003323 Bacteria 5857
7 Ga0070658_10000919 3300005327 Bacteria 25144
8 Ga0070658_10350960 3300005327 Bacteria 1263
9 Ga0070683_100029108 3300005329 Bacteria 4998
10 Ga0070683_100364719 3300005329 Bacteria 1376
11 Ga0070690_100195306 3300005330 Bacteria 1405
12 Ga0070680_100029653 3300005336 Bacteria 4393
13 Ga0070689_100312090 3300005340 Bacteria 1311
14 Ga0070661_100049807 3300005344 Bacteria 3066
15 Ga0070661_100396750 3300005344 Bacteria 1090
16 Ga0070661_100461583 3300005344 Bacteria 1012
17 Ga0070668_100004616 3300005347 Bacteria 10206
18 Ga0070688_100393642 3300005365 Bacteria 1024
19 Ga0070659_100029957 3300005366 Bacteria 4209
20 Ga0070681_10094609 3300005458 Bacteria 2936
21 Ga0070679_100013750 3300005530 Bacteria 7754
22 Ga0070679_100261039 3300005530 Bacteria 1687
23 Ga0070684_100179749 3300005535 Bacteria 1923
24 Ga0070665_100020628 3300005548 Bacteria 6621
25 Ga0070665_100068855 3300005548 Bacteria 3548
26 Ga0070665_100694693 3300005548 Bacteria 1030
27 Ga0068855_100442253 3300005563 Bacteria 1420
28 Ga0070664_100071131 3300005564 Bacteria 2981
29 Ga0068857_100117903 3300005577 Bacteria 2389
30 Ga0068857_100197442 3300005577 Bacteria 1833
31 Ga0068856_100649565 3300005614 Bacteria 1075
32 Ga0068864_100170579 3300005618 Bacteria 1984
33 Ga0068863_100026699 3300005841 Bacteria 5506
34 Ga0081455_10077468 3300005937 Bacteria 2735
35 Ga0081540_1002201 3300005983 Bacteria 16102
36 Ga0081539_10000168 3300005985 Bacteria 153724
37 Ga0081539_10000536 3300005985 Bacteria 78807
38 Ga0081539_10001076 3300005985 Bacteria 49708
39 Ga0081539_10005124 3300005985 Bacteria 13687
40 Ga0081539_10010549 3300005985 Bacteria 7482
41 Ga0075428_100001203 3300006844 Bacteria 27710
42 Ga0075428_100356400 3300006844 Bacteria 1570
43 Ga0075428_100479663 3300006844 Bacteria 1331
44 Ga0075430_100000653 3300006846 Bacteria 26431
45 Ga0075430_100001874 3300006846 Bacteria 17208
46 Ga0075431_100035991 3300006847 Bacteria 5099
47 Ga0075431_100266311 3300006847 Bacteria 1738
48 Ga0075429_100474663 3300006880 Bacteria 1096
49 Ga0075435_100606724 3300007076 Bacteria 949
50 Ga0105245_10937122 3300009098 Bacteria 908
51 Ga0114129_10002031 3300009147 Bacteria 27746
52 Ga0114129_10226864 3300009147 Bacteria 2517
53 Ga0105248_10019005 3300009177 Bacteria 7597
54 Ga0105248_10280435 3300009177 Bacteria 1876
55 Ga0105238_10149625 3300009551 Bacteria 2310
56 Ga0157369_10035607 3300013105 Bacteria 5457
57 Ga0157372_10170200 3300013307 Bacteria 2520
58 Ga0163163_10749984 3300014325 Bacteria 1040
59 Ga0157380_11035880 3300014326 Bacteria 856
60 Ga0206354_10510721 3300020081 Bacteria 1054
61 Ga0206353_10306370 3300020082 Bacteria 7467
62 Ga0213876_10008212 3300021384 Bacteria 5651
63 Ga0213875_10164134 3300021388 Bacteria 1042
64 Ga0224712_10002830 3300022467 Bacteria 4372
65 Ga0207699_10251257 3300025906 Bacteria 1219
66 Ga0207705_10018604 3300025909 Bacteria 4966
67 Ga0207705_10233560 3300025909 Bacteria 1399
68 Ga0207707_10663889 3300025912 Bacteria 878
69 Ga0207671_10508379 3300025914 Bacteria 960
70 Ga0207660_10045098 3300025917 Bacteria 3104
71 Ga0207662_10291267 3300025918 Bacteria 1083
72 Ga0207657_10093919 3300025919 Bacteria 2498
73 Ga0207657_10233250 3300025919 Bacteria 1471
74 Ga0207657_10242589 3300025919 Bacteria 1438
75 Ga0207657_10322766 3300025919 Bacteria 1220
76 Ga0207649_10073184 3300025920 Bacteria 2194
77 Ga0207694_10286380 3300025924 Bacteria 1354
78 Ga0207700_10496567 3300025928 Bacteria 1080
79 Ga0207664_10166072 3300025929 Bacteria 1886
80 Ga0207664_10273343 3300025929 Bacteria 1481
81 Ga0207670_10201130 3300025936 Bacteria 1514
82 Ga0207711_10154495 3300025941 Bacteria 2073
83 Ga0207661_10000534 3300025944 Bacteria 24348
84 Ga0207679_10186838 3300025945 Bacteria 1719
85 Ga0207679_10356896 3300025945 Bacteria 1276
86 Ga0207667_10286934 3300025949 Bacteria 1682
87 Ga0207639_10312502 3300026041 Bacteria 1392
88 Ga0207678_10221227 3300026067 Bacteria 1620
89 Ga0207708_10120080 3300026075 Bacteria 2048
90 Ga0207702_10175577 3300026078 Bacteria 1968
91 Ga0207674_10094251 3300026116 Bacteria 2980
92 Ga0207674_10134481 3300026116 Bacteria 2435
93 Ga0207675_100234131 3300026118 Bacteria 1773
94 Ga0207683_10603604 3300026121 Bacteria 1016
95 Ga0268266_10038269 3300028379 Bacteria 4084
96 Ga0268266_10056398 3300028379 Bacteria 3380
97 Ga0307515_10000241 3300028794 Bacteria 135591
98 Ga0307515_10016325 3300028794 Bacteria 13603
99 Ga0307515_10049758 3300028794 Bacteria 6294
100 Ga0307512_10006320 3300030522 Bacteria 12027
101 Ga0307513_10018393 3300031456 Bacteria 8348
102 Ga0307513_10031026 3300031456 Bacteria 6059
103 Ga0307513_10043654 3300031456 Bacteria 4921
104 Ga0307408_100027161 3300031548 Bacteria 3942
105 Ga0307408_100070227 3300031548 Bacteria 2585
106 Ga0307408_100127342 3300031548 Bacteria 1982
107 Ga0307408_100279929 3300031548 Bacteria 1389
108 Ga0307408_100581216 3300031548 Bacteria 993
109 Ga0307508_10009144 3300031616 Bacteria 9124
110 Ga0307508_10010412 3300031616 Bacteria 8510
111 Ga0307508_10063532 3300031616 Bacteria 3257
112 Ga0307516_10005227 3300031730 Bacteria 15627
113 Ga0307516_10011713 3300031730 Bacteria 9519
114 Ga0307516_10455929 3300031730 Bacteria 934
115 Ga0307405_10015658 3300031731 Bacteria 4113
116 Ga0307405_10039779 3300031731 Bacteria 2844
117 Ga0307405_10052279 3300031731 Bacteria 2539
118 Ga0307405_10093142 3300031731 Bacteria 2001
119 Ga0307405_10155773 3300031731 Bacteria 1612
120 Ga0307405_10256772 3300031731 Bacteria 1303
121 Ga0307413_10017522 3300031824 Bacteria 3733
122 Ga0307413_10092341 3300031824 Bacteria 1975
123 Ga0307413_10129939 3300031824 Bacteria 1722
124 Ga0307413_10503637 3300031824 Bacteria 973
125 Ga0307413_10600375 3300031824 Bacteria 901
126 Ga0307410_10005000 3300031852 Bacteria 6955
127 Ga0307410_10007013 3300031852 Bacteria 6133
128 Ga0307410_10147187 3300031852 Bacteria 1749
129 Ga0307410_10210018 3300031852 Bacteria 1491
130 Ga0326468_10000065 3300031889 Bacteria 8625
131 Ga0307406_10053270 3300031901 Bacteria 2576
132 Ga0307406_10057471 3300031901 Bacteria 2495
133 Ga0307406_10072095 3300031901 Bacteria 2266
134 Ga0307406_10079545 3300031901 Bacteria 2174
135 Ga0307406_10217388 3300031901 Bacteria 1418
136 Ga0307406_10230073 3300031901 Bacteria 1384
137 Ga0307407_10015405 3300031903 Bacteria 3779
138 Ga0307407_10084712 3300031903 Bacteria 1926
139 Ga0307407_10158953 3300031903 Bacteria 1477
140 Ga0307407_10214451 3300031903 Bacteria 1298
141 Ga0307407_10219798 3300031903 Bacteria 1284
142 Ga0307412_10020032 3300031911 Bacteria 4064
143 Ga0307409_100001717 3300031995 Bacteria 11045
144 Ga0307409_100003101 3300031995 Bacteria 8907
145 Ga0307409_100003558 3300031995 Bacteria 8496
146 Ga0307409_100006498 3300031995 Bacteria 6878
147 Ga0307409_100015021 3300031995 Bacteria 5064
148 Ga0307409_100053310 3300031995 Bacteria 3107
149 Ga0307409_100103837 3300031995 Bacteria 2365
150 Ga0307409_101033011 3300031995 Bacteria 841
151 Ga0307416_100004775 3300032002 Bacteria 8230
152 Ga0307416_100023729 3300032002 Bacteria 4459
153 Ga0307416_100078413 3300032002 Bacteria 2779
154 Ga0307416_100103239 3300032002 Bacteria 2488
155 Ga0307416_100253929 3300032002 Bacteria 1713
156 Ga0307416_100266061 3300032002 Bacteria 1679
157 Ga0307416_100592475 3300032002 Bacteria 1187
158 Ga0307416_100666900 3300032002 Bacteria 1126
159 Ga0307416_100748223 3300032002 Bacteria 1070
160 Ga0307414_10065027 3300032004 Bacteria 2600
161 Ga0307414_10180497 3300032004 Bacteria 1697
162 Ga0307411_10025513 3300032005 Bacteria 3543
163 Ga0307411_10110700 3300032005 Bacteria 1964
164 Ga0307411_10577914 3300032005 Bacteria 963
165 Ga0307415_100000007 3300032126 Bacteria 94604
166 Ga0307415_100013462 3300032126 Bacteria 4776
167 Ga0307415_100019440 3300032126 Bacteria 4124
168 Ga0307415_100062480 3300032126 Bacteria 2583
169 Ga0307415_100070109 3300032126 Bacteria 2460
170 Ga0307415_100079084 3300032126 Bacteria 2341
171 Ga0307415_100081565 3300032126 Bacteria 2311
172 Ga0307415_100120478 3300032126 Bacteria 1966
173 Ga0307415_100195027 3300032126 Bacteria 1601
174 Ga0307415_100540175 3300032126 Bacteria 1027
175 Ga0307507_10053342 3300033179 Bacteria 3864
176 Ga0307510_10146021 3300033180 Bacteria 1997
177 Ga0373940_0001214 3300035088 Bacteria 4545
178 Ga0373960_0062706 3300035121 Bacteria 1132
179 Ga0373955_0339155 3300035172 Bacteria 909
180 Ga0373962_0002679 3300035242 Bacteria 4236
181 Ga0373947_0563179 3300035725 Bacteria 776
182 Ga0373937_0058513 3300036401 Bacteria 3541
183 Ga0373925_0323839 3300037068 Bacteria 1248
184 Ga0395900_0042647 3300037418 Bacteria 4675
185 Ga0395898_0238837 3300037466 Bacteria 1733
186 Ga0436364_0858783 3300037853 Bacteria 6972
187 Ga0436364_0947052 3300037853 Bacteria 1752
188 Ga0436364_1132689 3300037853 Bacteria 8446
189 Ga0395901_0016395 3300038443 Bacteria 7544
190 Ga0395901_0482699 3300038443 Bacteria 1264
191 Ga0436365_0863130 3300039437 Bacteria 48169
192 Ga0451833_0871886 3300041491 Bacteria 842
193 Ga0451853_1897519 3300041512 Bacteria 9535
194 Ga0439455_0087696 3300042012 Bacteria 851
195 Ga0439463_006302 3300042016 Bacteria 2943
196 Ga0450903_029560 3300042138 Bacteria 830
197 Ga0439459_0026806 3300042438 Bacteria 1147
198 Ga0466972_0031891 3300044658 Bacteria 2590
199 Ga0466965_0116814 3300044683 Bacteria 1375
200 Ga0466965_0196950 3300044683 Bacteria 1067
201 Ga0466965_0325123 3300044683 Bacteria 838
202 Ga0466966_0035678 3300044684 Bacteria 3211
203 Ga0466961_0046721 3300044693 Bacteria 2768
204 Ga0466961_0068402 3300044693 Bacteria 2255
205 Ga0466961_0121329 3300044693 Bacteria 1641
206 Ga0466961_0163399 3300044693 Bacteria 1387
207 Ga0466963_0047785 3300044694 Bacteria 2825
208 Ga0466963_0068992 3300044694 Bacteria 2375
209 Ga0466963_0085308 3300044694 Bacteria 2144
210 Ga0466971_0016681 3300044719 Bacteria 3244
211 Ga0466971_0359195 3300044719 Bacteria 706
212 Ga0466970_0049416 3300044765 Bacteria 2243
213 Ga0466970_0102211 3300044765 Bacteria 1561
214 Ga0466957_0079912 3300044842 Bacteria 2035
215 Ga0466960_0004783 3300044901 Bacteria 5319
216 Ga0466960_0033821 3300044901 Bacteria 2378
217 Ga0466960_0040432 3300044901 Bacteria 2205
218 Ga0466959_0083923 3300045049 Bacteria 2293
219 Ga0466959_0111266 3300045049 Bacteria 1954
220 Ga0466959_0140599 3300045049 Bacteria 1706
221 Ga0466959_0399478 3300045049 Bacteria 934
222 Ga0466958_0166354 3300045836 Bacteria 1395
223 Ga0466967_0001486 3300045976 Bacteria 13679
224 Ga0466967_0011428 3300045976 Bacteria 6722
225 Ga0466967_0089759 3300045976 Bacteria 2791
226 Ga0466967_0117975 3300045976 Bacteria 2447
227 Ga0466967_0448043 3300045976 Bacteria 1261
228 Ga0495603_0076529 3300046455 Bacteria 1964
229 Ga0495638_0142674 3300046460 Bacteria 1396
230 Ga0495594_0028409 3300046499 Bacteria 3018
231 Ga0495631_0095386 3300046518 Bacteria 1281
232 Ga0495663_0033500 3300046525 Bacteria 1534
233 Ga0495656_0069308 3300046615 Bacteria 1562
234 Ga0495593_0086743 3300047673 Bacteria 1614
235 Ga0496100_0571755 3300048903 Bacteria 876
236 Ga0496104_0127360 3300048907 Bacteria 2445
237 Ga0496104_0361295 3300048907 Bacteria 1364
238 Ga0496108_0555745 3300048911 Bacteria 1001
239 Ga0496111_0453572 3300048914 Bacteria 946
240 Ga0496112_0078639 3300048915 Bacteria 3261
241 Ga0496112_0084035 3300048915 Bacteria 3148
242 Ga0496112_0134691 3300048915 Bacteria 2441
243 Ga0496112_0218405 3300048915 Bacteria 1863
244 Ga0496113_0118316 3300048916 Bacteria 2069
245 Ga0496113_0247869 3300048916 Bacteria 1422
246 Ga0496113_0302956 3300048916 Bacteria 1280
247 Ga0501031_0400016 3300049568 Bacteria 888
248 Ga0501032_0037096 3300049569 Bacteria 3325
249 Ga0501033_0028166 3300049570 Bacteria 4223
250 Ga0501034_0012847 3300049571 Bacteria 8637
251 Ga0501034_0044526 3300049571 Bacteria 4488
252 Ga0501034_0360894 3300049571 Bacteria 1380
253 Ga0501034_0706867 3300049571 Bacteria 906
254 Ga0501036_0005885 3300049572 Bacteria 9934
255 Ga0501036_0180723 3300049572 Bacteria 1776
256 Ga0501037_0006511 3300049573 Bacteria 8544
257 Ga0501037_0116538 3300049573 Bacteria 1922
258 Ga0501038_0009605 3300049574 Bacteria 8876
259 Ga0501038_0050535 3300049574 Bacteria 3591
260 Ga0501039_0079508 3300049575 Bacteria 2551
261 Ga0501039_0088503 3300049575 Bacteria 2412
262 Ga0501040_0486639 3300049576 Bacteria 889
263 Ga0501042_0017403 3300049578 Bacteria 4957
264 Ga0501043_0022935 3300049579 Bacteria 4894
265 Ga0501046_0021665 3300049580 Bacteria 5302
266 Ga0501047_0003048 3300049581 Bacteria 15901
267 Ga0501047_0032701 3300049581 Bacteria 5022
268 Ga0501047_0043583 3300049581 Bacteria 4334
269 Ga0501047_0222324 3300049581 Bacteria 1744
270 Ga0501048_0010382 3300049582 Bacteria 6953
271 Ga0501048_0285716 3300049582 Bacteria 1173
272 Ga0501069_0166474 3300049585 Bacteria 1271
273 Ga0501073_0048702 3300049589 Bacteria 2974
274 Ga0501074_0000975 3300049590 Bacteria 18524
275 Ga0501074_0050425 3300049590 Bacteria 3005
276 Ga0501076_0087052 3300049592 Bacteria 2511
277 Ga0501035_0000921 3300049822 Bacteria 31170
278 Ga0501044_0000239 3300049823 Bacteria 69462
279 Ga0501044_0024205 3300049823 Bacteria 6450
280 Ga0501044_0080323 3300049823 Bacteria 3303
281 Ga0501045_0460845 3300049824 Bacteria 945
282 nmdc:mga00v17_57257_c1 3300050491 Bacteria 2384
283 nmdc:mga05p37_250357_c1 3300050507 Bacteria 2125
284 nmdc:mga09592_75281_c1 3300050508 Bacteria 2869
285 nmdc:mga0qj67_773_c1 3300050509 Bacteria 21781
286 nmdc:mga06r32_19598_c2 3300050510 Bacteria 4114
287 nmdc:mga06r32_53128_c1 3300050510 Bacteria 3881
288 Ga0495619_0193527 3300053085 Bacteria 1407
289 Ga0500644_0013587 3300053088 Bacteria 2277
290 Ga0500641_0012558 3300053096 Bacteria 3095
291 Ga0500555_058524 3300053103 Bacteria 1041
292 Ga0500569_003969 3300053109 Bacteria 3071
293 Ga0500658_0184382 3300053134 Bacteria 951
294 Ga0500600_0054130 3300053149 Bacteria 2263
295 Ga0501084_0332147 3300054114 Bacteria 1284
296 Ga0466962_0001186 3300061719 Bacteria 12015
297 Ga0466962_0131380 3300061719 Bacteria 1210
298 2501940814 2501939600 Bacteria 6907073
299 2623499990 2622736605 Bacteria 4992138
300 2623587399 2622736626 Bacteria 7181580
301 2739237144 2738543011 Bacteria 5731169
302 2772644627 2772190715 Bacteria 6959372
303 2831938078 2831935698 Bacteria 5963223
304 2832007684 2832004796 Bacteria 6538017
305 2855676733 2855670206 Bacteria 7120389
306 2855677364 2855676851 Bacteria 7063653
307 2855686073 2855683550 Bacteria 7134265
308 2856861267 2856858025 Bacteria 7255264
309 2857290098 2857288857 Bacteria 7189066
310 2858855540 2858848962 Bacteria 6963058
311 2858869322 2858868258 Bacteria 7683772
312 2858885370 2858882152 Bacteria 7230291
313 2858892310 2858888857 Bacteria 7060307
314 2858902147 2858895516 Bacteria 7378898
315 2858903971 2858902515 Bacteria 7086037
316 2866070104 2866065130 Bacteria 6518152
317 2867308492 2867302475 Bacteria 7087181
318 2867315456 2867312974 Bacteria 7058875
319 2867325584 2867319477 Bacteria 7069771
320 2867507916 2867507094 Bacteria 6506033
321 2869049341 2869048445 Bacteria 6875584
322 2869068239 2869061728 Bacteria 7112407
323 2869072348 2869068681 Bacteria 7205615
324 2880492837 2880489317 Bacteria 7096270
325 2880499471 2880495981 Bacteria 7340502
326 2902587805 2902582711 Bacteria 6187705
327 2929221444 2929219909 Bacteria 6984360
328 2996226787 2996221748 Bacteria 6799777
329 649812022 649633069 Bacteria 6962533
330 8003863342 8003856774 Bacteria 7675274
331 8054706064 8054704163 Bacteria 7247792
332 8054732119 8054727385 Bacteria 7558670
333 8054741010 8054734606 Bacteria 6947278
334 Ga0070671_100239582
335 JGI25406J46586_10008797
336 JGI25406J46586_10024215
337 JGI25406J46586_10027644
338 rootH1_10040086
339 Ga0070658_10000919
340 Ga0070658_10350960
341 Ga0070683_100029108
342 Ga0070683_100364719
343 Ga0070690_100195306
344 Ga0070680_100029653
345 Ga0070689_100312090
346 Ga0070661_100049807
347 Ga0070661_100396750
348 Ga0070661_100461583
349 Ga0070668_100004616
350 Ga0070688_100393642
351 Ga0070659_100029957
352 Ga0070681_10094609
353 Ga0070679_100013750
354 Ga0070679_100261039
355 Ga0070684_100179749
356 Ga0070665_100020628
357 Ga0070665_100068855
358 Ga0070665_100694693
359 Ga0068855_100442253
360 Ga0070664_100071131
361 Ga0068857_100117903
362 Ga0068857_100197442
363 Ga0068856_100649565
364 Ga0068864_100170579
365 Ga0068863_100026699
366 Ga0081455_10077468
367 Ga0081540_1002201
368 Ga0081539_10000168
369 Ga0081539_10000536
370 Ga0081539_10001076
371 Ga0081539_10005124
372 Ga0081539_10010549
373 Ga0075428_100001203
374 Ga0075428_100356400
375 Ga0075428_100479663
376 Ga0075430_100000653
377 Ga0075430_100001874
378 Ga0075431_100035991
379 Ga0075431_100266311
380 Ga0075429_100474663
381 Ga0075435_100606724
382 Ga0105245_10937122
383 Ga0114129_10002031
384 Ga0114129_10226864
385 Ga0105248_10019005
386 Ga0105248_10280435
387 Ga0105238_10149625
388 Ga0157369_10035607
389 Ga0157372_10170200
390 Ga0163163_10749984
391 Ga0157380_11035880
392 Ga0206354_10510721
393 Ga0206353_10306370
394 Ga0213876_10008212
395 Ga0213875_10164134
396 Ga0224712_10002830
397 Ga0207699_10251257
398 Ga0207705_10018604
399 Ga0207705_10233560
400 Ga0207707_10663889
401 Ga0207671_10508379
402 Ga0207660_10045098
403 Ga0207662_10291267
404 Ga0207657_10093919
405 Ga0207657_10233250
406 Ga0207657_10242589
407 Ga0207657_10322766
408 Ga0207649_10073184
409 Ga0207694_10286380
410 Ga0207700_10496567
411 Ga0207664_10166072
412 Ga0207664_10273343
413 Ga0207670_10201130
414 Ga0207711_10154495
415 Ga0207661_10000534
416 Ga0207679_10186838
417 Ga0207679_10356896
418 Ga0207667_10286934
419 Ga0207639_10312502
420 Ga0207678_10221227
421 Ga0207708_10120080
422 Ga0207702_10175577
423 Ga0207674_10094251
424 Ga0207674_10134481
425 Ga0207675_100234131
426 Ga0207683_10603604
427 Ga0268266_10038269
428 Ga0268266_10056398
429 Ga0307515_10000241
430 Ga0307515_10016325
431 Ga0307515_10049758
432 Ga0307512_10006320
433 Ga0307513_10018393
434 Ga0307513_10031026
435 Ga0307513_10043654
436 Ga0307408_100027161
437 Ga0307408_100070227
438 Ga0307408_100127342
439 Ga0307408_100279929
440 Ga0307408_100581216
441 Ga0307508_10009144
442 Ga0307508_10010412
443 Ga0307508_10063532
444 Ga0307516_10005227
445 Ga0307516_10011713
446 Ga0307516_10455929
447 Ga0307405_10015658
448 Ga0307405_10039779
449 Ga0307405_10052279
450 Ga0307405_10093142
451 Ga0307405_10155773
452 Ga0307405_10256772
453 Ga0307413_10017522
454 Ga0307413_10092341
455 Ga0307413_10129939
456 Ga0307413_10503637
457 Ga0307413_10600375
458 Ga0307410_10005000
459 Ga0307410_10007013
460 Ga0307410_10147187
461 Ga0307410_10210018
462 Ga0326468_10000065
463 Ga0307406_10053270
464 Ga0307406_10057471
465 Ga0307406_10072095
466 Ga0307406_10079545
467 Ga0307406_10217388
468 Ga0307406_10230073
469 Ga0307407_10015405
470 Ga0307407_10084712
471 Ga0307407_10158953
472 Ga0307407_10214451
473 Ga0307407_10219798
474 Ga0307412_10020032
475 Ga0307409_100001717
476 Ga0307409_100003101
477 Ga0307409_100003558
478 Ga0307409_100006498
479 Ga0307409_100015021
480 Ga0307409_100053310
481 Ga0307409_100103837
482 Ga0307409_101033011
483 Ga0307416_100004775
484 Ga0307416_100023729
485 Ga0307416_100078413
486 Ga0307416_100103239
487 Ga0307416_100253929
488 Ga0307416_100266061
489 Ga0307416_100592475
490 Ga0307416_100666900
491 Ga0307416_100748223
492 Ga0307414_10065027
493 Ga0307414_10180497
494 Ga0307411_10025513
495 Ga0307411_10110700
496 Ga0307411_10577914
497 Ga0307415_100000007
498 Ga0307415_100013462
499 Ga0307415_100019440
500 Ga0307415_100062480
501 Ga0307415_100070109
502 Ga0307415_100079084
503 Ga0307415_100081565
504 Ga0307415_100120478
505 Ga0307415_100195027
506 Ga0307415_100540175
507 Ga0307507_10053342
508 Ga0307510_10146021
509 Ga0373940_0001214
510 Ga0373960_0062706
511 Ga0373955_0339155
512 Ga0373962_0002679
513 Ga0373947_0563179
514 Ga0373937_0058513
515 Ga0373925_0323839
516 Ga0395900_0042647
517 Ga0395898_0238837
518 Ga0436364_0858783
519 Ga0436364_0947052
520 Ga0436364_1132689
521 Ga0395901_0016395
522 Ga0395901_0482699
523 Ga0436365_0863130
524 Ga0451833_0871886
525 Ga0451853_1897519
526 Ga0439455_0087696
527 Ga0439463_006302
528 Ga0450903_029560
529 Ga0439459_0026806
530 Ga0466972_0031891
531 Ga0466965_0116814
532 Ga0466965_0196950
533 Ga0466965_0325123
534 Ga0466966_0035678
535 Ga0466961_0046721
536 Ga0466961_0068402
537 Ga0466961_0121329
538 Ga0466961_0163399
539 Ga0466963_0047785
540 Ga0466963_0068992
541 Ga0466963_0085308
542 Ga0466971_0016681
543 Ga0466971_0359195
544 Ga0466970_0049416
545 Ga0466970_0102211
546 Ga0466957_0079912
547 Ga0466960_0004783
548 Ga0466960_0033821
549 Ga0466960_0040432
550 Ga0466959_0083923
551 Ga0466959_0111266
552 Ga0466959_0140599
553 Ga0466959_0399478
554 Ga0466958_0166354
555 Ga0466967_0001486
556 Ga0466967_0011428
557 Ga0466967_0089759
558 Ga0466967_0117975
559 Ga0466967_0448043
560 Ga0495603_0076529
561 Ga0495638_0142674
562 Ga0495594_0028409
563 Ga0495631_0095386
564 Ga0495663_0033500
565 Ga0495656_0069308
566 Ga0495593_0086743
567 Ga0496100_0571755
568 Ga0496104_0127360
569 Ga0496104_0361295
570 Ga0496108_0555745
571 Ga0496111_0453572
572 Ga0496112_0078639
573 Ga0496112_0084035
574 Ga0496112_0134691
575 Ga0496112_0218405
576 Ga0496113_0118316
577 Ga0496113_0247869
578 Ga0496113_0302956
579 Ga0501031_0400016
580 Ga0501032_0037096
581 Ga0501033_0028166
582 Ga0501034_0012847
583 Ga0501034_0044526
584 Ga0501034_0360894
585 Ga0501034_0706867
586 Ga0501036_0005885
587 Ga0501036_0180723
588 Ga0501037_0006511
589 Ga0501037_0116538
590 Ga0501038_0009605
591 Ga0501038_0050535
592 Ga0501039_0079508
593 Ga0501039_0088503
594 Ga0501040_0486639
595 Ga0501042_0017403
596 Ga0501043_0022935
597 Ga0501046_0021665
598 Ga0501047_0003048
599 Ga0501047_0032701
600 Ga0501047_0043583
601 Ga0501047_0222324
602 Ga0501048_0010382
603 Ga0501048_0285716
604 Ga0501069_0166474
605 Ga0501073_0048702
606 Ga0501074_0000975
607 Ga0501074_0050425
608 Ga0501076_0087052
609 Ga0501035_0000921
610 Ga0501044_0000239
611 Ga0501044_0024205
612 Ga0501044_0080323
613 Ga0501045_0460845
614 nmdc:mga00v17_57257_c1
615 nmdc:mga05p37_250357_c1
616 nmdc:mga09592_75281_c1
617 nmdc:mga0qj67_773_c1
618 nmdc:mga06r32_19598_c2
619 nmdc:mga06r32_53128_c1
620 Ga0495619_0193527
621 Ga0500644_0013587
622 Ga0500641_0012558
623 Ga0500555_058524
624 Ga0500569_003969
625 Ga0500658_0184382
626 Ga0500600_0054130
627 Ga0501084_0332147
628 Ga0466962_0001186
629 Ga0466962_0131380
630 2501940814
631 2623499990
632 2623587399
633 2739237144
634 2772644627
635 2831938078
636 2832007684
637 2855676733
638 2855677364
639 2855686073
640 2856861267
641 2857290098
642 2858855540
643 2858869322
644 2858885370
645 2858892310
646 2858902147
647 2858903971
648 2866070104
649 2867308492
650 2867315456
651 2867325584
652 2867507916
653 2869049341
654 2869068239
655 2869072348
656 2880492837
657 2880499471
658 2902587805
659 2929221444
660 2996226787
661 649812022
662 8003863342
663 8054706064
664 8054732119
665 8054741010

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02254

TrkA_N

TrkA-N domain

34

150

0.96

PF02080

TrkA_C

TrkA-C domain

176

243

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
7vqu-assembly1.cif.gz_A crystal structure of lsd1 in complex with compound s1427 0.9879 13 45
7xw8-assembly1.cif.gz_A crystal structure of lysine specific demethylase 1 (lsd1) with tak-418 distomer, fad-adduct 0.9868 13 45
7vqt-assembly1.cif.gz_A crystal structure of lsd1 in complex with compound 5 0.9866 13 45
4czz-assembly1.cif.gz_A histone demethylase lsd1(kdm1a)-corest3 complex 0.9864 13 45
2z5u-assembly1.cif.gz_A crystal structure of lysine-specific histone demethylase 1 0.9827 13 45
ID Description Score Start End Superfamily
af_F4JK86_5_252_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.976 16 45 3.50.50.60
af_O06538_2_320_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9745 14 45 3.50.50.60
af_I6XF25_142_211_3.30.70.1450 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Regulator of K+ conductance, C-terminal domain 0.9723 155 223 3.30.70.1450
af_A4HWA7_1_176_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9691 14 44 3.50.50.60
af_Q0D7W4_71_358_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9639 13 46 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A2M8NK00-F1-model_v4 Potassium transporter TrkA 0.9699 13 94 GO:0005886
GO:0015079
AF-A0A5J4PKC0-F1-model_v4 Trk system potassium uptake protein TrkA 0.9617 15 99 GO:0005886
GO:0015079
AF-A0A7X5WSC8-F1-model_v4 Trk system potassium transporter TrkA 0.9616 19 116 GO:0005886
GO:0015079
AF-X1INN7-F1-model_v4 RCK N-terminal domain-containing protein 0.9554 18 106 GO:0005886
GO:0015079
AF-A0A3D4W1I8-F1-model_v4 Potassium transporter TrkA 0.9504 15 114 GO:0005886
GO:0015079

Map