F407671

General Info

Members Datasets Scaffolds Average Seq Length
325 212 650 238

Family's Representative Sequence

Representative Sequence 3300005334|Ga0068869_100215230|Ga0068869_1002152303
Length 249
Sequence MAKHGKSFVESRAKVDRTREYGPVEAIRLLKETKRAKFDETVEVHIRTGLNVRHADEQLRGTIALPHGLGKEVKIAVFAKGDKAREAEEAGADFVGADDLAKRIQDEGFTDFDVAIATPDMMPVVGRLGRILGPQGKMPNPKVGTVTMDVRKAVEESKAGKVEYRTDRTAIVHMTLGKTSFEERQLLENYQAIVEELIRAKPSAAKGKYLRTITVASTMGPGIKVDPSKTRDLIEEEGNLSENAVAAAL

Samples

Sample ID Description Type Environment
1 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
16 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
17 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
18 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
19 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
20 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
21 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
22 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
23 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
26 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
27 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
28 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
29 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
30 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
31 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
32 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
33 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
34 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
35 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
36 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
37 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
38 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
39 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
40 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
41 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
42 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
43 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
44 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
45 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
46 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
47 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
48 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
49 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
50 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
51 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
52 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
53 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
54 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
56 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
57 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
58 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
59 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
60 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
61 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
62 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
64 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
65 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
66 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
67 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
68 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
69 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
70 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
71 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
72 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
73 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
74 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
75 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
76 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
77 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
78 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
110 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
111 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
112 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
113 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
114 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
115 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
116 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
117 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
118 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
119 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
120 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
121 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
122 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
123 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
124 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
125 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
126 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
127 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
128 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
129 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
130 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
131 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
132 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
133 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
134 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
135 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
136 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
137 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
138 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
139 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
140 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
141 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
142 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
143 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
144 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
145 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
146 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
147 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
148 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
149 3300042530 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530L_E14_082316_2047 Metagenome Rhizosphere
150 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
151 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
152 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
153 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
154 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
155 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
156 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
157 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
158 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
159 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
160 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
161 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
162 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
163 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
164 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
165 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
166 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
167 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
168 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
169 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
170 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
171 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
172 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
173 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
174 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
175 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
176 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
177 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
178 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
179 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
180 3300049537 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B12_A_3_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
181 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
182 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
183 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
184 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
185 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
186 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
187 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
188 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
189 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
190 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
191 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
192 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
193 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
194 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
195 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
196 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
197 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
198 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
199 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
200 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
201 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
202 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
203 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
204 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
205 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
206 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
207 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
208 3300053736 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 endosphere Metagenome Endosphere
209 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
210 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
211 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
212 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.77
Metatranscriptomes 1.23
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.77
Nodule 0
Rhizoplane 3.08
Rhizosphere 91.08
Stem 0
Stem Tuber 0
Unclassified 0.31

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068869_100215230 3300005334 Bacteria 1521
2 JGI24739J22299_10061706 3300001989 Bacteria 1183
3 JGI25406J46586_10029146 3300003203 Bacteria 2093
4 JGI25407J50210_10001748 3300003373 Bacteria 4990
5 JGI25407J50210_10012962 3300003373 Bacteria 2140
6 JGI25407J50210_10014942 3300003373 Bacteria 2005
7 JGI25407J50210_10046345 3300003373 Bacteria 1107
8 Ga0070658_10162412 3300005327 Bacteria 1874
9 Ga0070676_10382745 3300005328 Bacteria 975
10 Ga0070683_101096256 3300005329 Bacteria 765
11 Ga0070670_100450430 3300005331 Bacteria 1141
12 Ga0070680_100019632 3300005336 Bacteria 5360
13 Ga0070680_100048680 3300005336 Bacteria 3455
14 Ga0068868_100044017 3300005338 Bacteria 3489
15 Ga0070689_100298440 3300005340 Bacteria 1341
16 Ga0070687_100059651 3300005343 Bacteria 2010
17 Ga0070673_100301030 3300005364 Bacteria 1412
18 Ga0070659_100191856 3300005366 Bacteria 1679
19 Ga0070659_100252607 3300005366 Bacteria 1461
20 Ga0070709_10296439 3300005434 Bacteria 1180
21 Ga0070710_10523606 3300005437 Bacteria 815
22 Ga0070701_10187619 3300005438 Bacteria 1215
23 Ga0070701_10411241 3300005438 Bacteria 859
24 Ga0070711_100002288 3300005439 Bacteria 10863
25 Ga0070711_100379696 3300005439 Bacteria 1142
26 Ga0070705_100502417 3300005440 Bacteria 921
27 Ga0070700_100039719 3300005441 Bacteria 2876
28 Ga0070700_100571230 3300005441 Bacteria 881
29 Ga0070708_100159165 3300005445 Bacteria 2104
30 Ga0070663_100162656 3300005455 Bacteria 1719
31 Ga0070678_100186894 3300005456 Bacteria 1700
32 Ga0070681_10022947 3300005458 Bacteria 6271
33 Ga0070681_10031635 3300005458 Bacteria 5312
34 Ga0070681_10109844 3300005458 Bacteria 2697
35 Ga0070681_10360079 3300005458 Bacteria 1365
36 Ga0070681_10446677 3300005458 Bacteria 1205
37 Ga0070685_10058414 3300005466 Bacteria 2249
38 Ga0070706_100302236 3300005467 Bacteria 1493
39 Ga0070706_100517529 3300005467 Bacteria 1110
40 Ga0070698_100238042 3300005471 Bacteria 1753
41 Ga0070698_100544254 3300005471 Bacteria 1100
42 Ga0070698_100807884 3300005471 Unclassified 882
43 Ga0070679_100021670 3300005530 Bacteria 6275
44 Ga0070679_100032031 3300005530 Bacteria 5198
45 Ga0070679_100584922 3300005530 Bacteria 1060
46 Ga0070679_100828080 3300005530 Bacteria 869
47 Ga0070684_100156480 3300005535 Bacteria 2067
48 Ga0070697_100204896 3300005536 Bacteria 1677
49 Ga0070697_100263783 3300005536 Bacteria 1475
50 Ga0068853_100156677 3300005539 Bacteria 2052
51 Ga0068853_100965926 3300005539 Bacteria 819
52 Ga0070672_100121376 3300005543 Bacteria 2139
53 Ga0070693_100296204 3300005547 Bacteria 1089
54 Ga0070665_100028564 3300005548 Bacteria 5617
55 Ga0070664_100103596 3300005564 Bacteria 2477
56 Ga0068857_100437953 3300005577 Bacteria 1221
57 Ga0068856_100173722 3300005614 Bacteria 2167
58 Ga0070702_100003960 3300005615 Bacteria 6716
59 Ga0068852_100266965 3300005616 Bacteria 1645
60 Ga0068852_100276404 3300005616 Bacteria 1618
61 Ga0068852_100343959 3300005616 Bacteria 1454
62 Ga0068859_100236924 3300005617 Bacteria 1914
63 Ga0068864_100201664 3300005618 Bacteria 1828
64 Ga0068861_100020993 3300005719 Bacteria 4688
65 Ga0068861_100100346 3300005719 Bacteria 2300
66 Ga0068870_10048760 3300005840 Bacteria 2231
67 Ga0068858_100074753 3300005842 Bacteria 3147
68 Ga0068858_100180006 3300005842 Bacteria 1996
69 Ga0068858_100450126 3300005842 Bacteria 1241
70 Ga0068860_100026657 3300005843 Bacteria 5571
71 Ga0068862_100156085 3300005844 Bacteria 2034
72 Ga0081455_10096173 3300005937 Bacteria 2389
73 Ga0081538_10003407 3300005981 Bacteria 15040
74 Ga0081538_10004819 3300005981 Bacteria 12299
75 Ga0081538_10007363 3300005981 Bacteria 9531
76 Ga0081538_10008419 3300005981 Bacteria 8757
77 Ga0081538_10011159 3300005981 Bacteria 7299
78 Ga0081538_10014954 3300005981 Bacteria 6042
79 Ga0081538_10016746 3300005981 Bacteria 5604
80 Ga0081538_10032403 3300005981 Bacteria 3503
81 Ga0081538_10062071 3300005981 Bacteria 2134
82 Ga0081538_10066633 3300005981 Bacteria 2017
83 Ga0081538_10129366 3300005981 Bacteria 1191
84 Ga0081539_10002042 3300005985 Bacteria 30343
85 Ga0081539_10149786 3300005985 Bacteria 1124
86 Ga0075365_10129049 3300006038 Bacteria 1749
87 Ga0075365_10144165 3300006038 Bacteria 1654
88 Ga0075432_10165862 3300006058 Bacteria 856
89 Ga0070716_100018578 3300006173 Bacteria 3625
90 Ga0070716_100182151 3300006173 Bacteria 1380
91 Ga0070712_100013065 3300006175 Bacteria 5296
92 Ga0070712_100249364 3300006175 Bacteria 1418
93 Ga0097621_100362075 3300006237 Bacteria 1292
94 Ga0097621_100663685 3300006237 Bacteria 958
95 Ga0075428_100247503 3300006844 Bacteria 1922
96 Ga0075428_100485142 3300006844 Bacteria 1323
97 Ga0075434_100824402 3300006871 Bacteria 943
98 Ga0075434_101113699 3300006871 Bacteria 803
99 Ga0097620_100236925 3300006931 Bacteria 1914
100 Ga0099794_10115493 3300007265 Bacteria 1347
101 Ga0105240_10352018 3300009093 Bacteria 1670
102 Ga0111539_10081527 3300009094 Bacteria 3805
103 Ga0111539_10743038 3300009094 Bacteria 1142
104 Ga0105245_10222998 3300009098 Bacteria 1820
105 Ga0114129_10030455 3300009147 Bacteria 7636
106 Ga0105243_10169474 3300009148 Bacteria 1890
107 Ga0105243_10226899 3300009148 Bacteria 1655
108 Ga0105243_10234216 3300009148 Bacteria 1631
109 Ga0105239_10743353 3300010375 Bacteria 1122
110 Ga0157370_10040842 3300013104 Bacteria 4478
111 Ga0157370_10058306 3300013104 Bacteria 3670
112 Ga0157369_10198499 3300013105 Bacteria 2106
113 Ga0157369_10544220 3300013105 Bacteria 1200
114 Ga0163162_10453128 3300013306 Bacteria 1415
115 Ga0163163_10151506 3300014325 Bacteria 2363
116 Ga0157380_10181021 3300014326 Bacteria 1852
117 Ga0157377_10011750 3300014745 Bacteria 4380
118 Ga0197907_10948492 3300020069 Bacteria 915
119 Ga0206356_10832728 3300020070 Bacteria 1486
120 Ga0206352_10294115 3300020078 Bacteria 4341
121 Ga0213872_10000326 3300021361 Bacteria 40322
122 Ga0213876_10008134 3300021384 Bacteria 5681
123 Ga0213876_10072916 3300021384 Bacteria 1813
124 Ga0213875_10001163 3300021388 Bacteria 18052
125 Ga0213875_10010338 3300021388 Bacteria 4674
126 Ga0207426_1021348 3300025302 Bacteria 2239
127 Ga0207710_10224400 3300025900 Bacteria 934
128 Ga0207688_10044848 3300025901 Bacteria 2465
129 Ga0207699_10047224 3300025906 Bacteria 2523
130 Ga0207643_10101077 3300025908 Bacteria 1691
131 Ga0207705_10244756 3300025909 Bacteria 1367
132 Ga0207684_10257377 3300025910 Bacteria 1506
133 Ga0207707_10092943 3300025912 Bacteria 2635
134 Ga0207707_10208851 3300025912 Bacteria 1701
135 Ga0207695_10111891 3300025913 Bacteria 2709
136 Ga0207693_10082425 3300025915 Bacteria 2519
137 Ga0207693_10201025 3300025915 Bacteria 1567
138 Ga0207663_10635336 3300025916 Bacteria 841
139 Ga0207660_10045961 3300025917 Bacteria 3079
140 Ga0207652_10016829 3300025921 Bacteria 5976
141 Ga0207652_10107718 3300025921 Bacteria 2468
142 Ga0207694_10189371 3300025924 Bacteria 1671
143 Ga0207659_10585413 3300025926 Bacteria 950
144 Ga0207700_10373707 3300025928 Bacteria 1245
145 Ga0207706_10104694 3300025933 Bacteria 2489
146 Ga0207706_10133827 3300025933 Bacteria 2181
147 Ga0207706_10135718 3300025933 Bacteria 2165
148 Ga0207709_10059015 3300025935 Bacteria 2387
149 Ga0207665_10093490 3300025939 Bacteria 2088
150 Ga0207665_10165862 3300025939 Bacteria 1592
151 Ga0207691_10136101 3300025940 Bacteria 2167
152 Ga0207679_10168583 3300025945 Bacteria 1800
153 Ga0207679_10578413 3300025945 Bacteria 1010
154 Ga0207712_10098094 3300025961 Bacteria 2172
155 Ga0207703_10371834 3300026035 Bacteria 1320
156 Ga0207639_10215473 3300026041 Bacteria 1655
157 Ga0207678_10149188 3300026067 Bacteria 1996
158 Ga0207708_10039146 3300026075 Bacteria 3611
159 Ga0207708_10145641 3300026075 Bacteria 1861
160 Ga0207702_10144049 3300026078 Bacteria 2160
161 Ga0207648_10094974 3300026089 Bacteria 2607
162 Ga0207676_10055896 3300026095 Bacteria 3101
163 Ga0207674_10462251 3300026116 Bacteria 1226
164 Ga0207683_10175632 3300026121 Bacteria 1941
165 Ga0207683_10482995 3300026121 Bacteria 1143
166 Ga0207698_10226836 3300026142 Bacteria 1693
167 Ga0207428_10457204 3300027907 Bacteria 930
168 Ga0265330_10063625 3300031235 Bacteria 1603
169 Ga0265327_10017374 3300031251 Bacteria 4517
170 Ga0265327_10017710 3300031251 Bacteria 4452
171 Ga0265327_10134442 3300031251 Bacteria 1161
172 Ga0265316_10086332 3300031344 Bacteria 2399
173 Ga0307408_100128607 3300031548 Bacteria 1973
174 Ga0307408_100196918 3300031548 Bacteria 1628
175 Ga0307408_100238234 3300031548 Bacteria 1494
176 Ga0307405_10498946 3300031731 Bacteria 975
177 Ga0307413_10007576 3300031824 Bacteria 5054
178 Ga0307413_10207326 3300031824 Bacteria 1420
179 Ga0307413_10384725 3300031824 Bacteria 1094
180 Ga0307410_10020361 3300031852 Bacteria 4056
181 Ga0307410_10131742 3300031852 Bacteria 1837
182 Ga0307410_10395352 3300031852 Bacteria 1115
183 Ga0307410_10815924 3300031852 Bacteria 794
184 Ga0326468_10006288 3300031889 Bacteria 1095
185 Ga0307406_10108833 3300031901 Bacteria 1903
186 Ga0307407_10015344 3300031903 Bacteria 3785
187 Ga0307407_10072259 3300031903 Bacteria 2057
188 Ga0307407_10332218 3300031903 Bacteria 1070
189 Ga0307409_100000534 3300031995 Bacteria 16437
190 Ga0307409_100032385 3300031995 Bacteria 3789
191 Ga0307409_100036124 3300031995 Bacteria 3628
192 Ga0307409_100088264 3300031995 Bacteria 2531
193 Ga0307409_100196349 3300031995 Bacteria 1801
194 Ga0307416_100018928 3300032002 Bacteria 4867
195 Ga0307416_100021032 3300032002 Bacteria 4673
196 Ga0307416_100393668 3300032002 Bacteria 1420
197 Ga0307416_100594665 3300032002 Bacteria 1185
198 Ga0307416_101224164 3300032002 Bacteria 856
199 Ga0307414_10089137 3300032004 Bacteria 2285
200 Ga0307411_10301548 3300032005 Bacteria 1285
201 Ga0307415_100000877 3300032126 Bacteria 13752
202 Ga0307415_100003728 3300032126 Bacteria 7802
203 Ga0307415_100723277 3300032126 Bacteria 901
204 Ga0373954_0245789 3300035118 Bacteria 881
205 Ga0373957_0033151 3300035120 Bacteria 1907
206 Ga0373943_0208344 3300035170 Bacteria 1085
207 Ga0373935_0341761 3300035692 Bacteria 1066
208 Ga0373927_0044867 3300035695 Bacteria 2860
209 Ga0373933_0051062 3300035724 Bacteria 2470
210 Ga0373947_0079137 3300035725 Bacteria 2031
211 Ga0373937_0008310 3300036401 Bacteria 9012
212 Ga0373937_0132323 3300036401 Bacteria 2330
213 Ga0373937_0600340 3300036401 Bacteria 1045
214 Ga0373925_0321181 3300037068 Bacteria 1253
215 Ga0395899_0375974 3300037312 Bacteria 945
216 Ga0395900_0087161 3300037418 Bacteria 3209
217 Ga0395900_0283034 3300037418 Bacteria 1649
218 Ga0395900_0443703 3300037418 Bacteria 1255
219 Ga0395898_0029500 3300037466 Bacteria 5494
220 Ga0395898_0736782 3300037466 Bacteria 927
221 Ga0436364_0803086 3300037853 Bacteria 1588
222 Ga0436364_0849938 3300037853 Bacteria 18072
223 Ga0395901_0105378 3300038443 Bacteria 2959
224 Ga0395901_0123800 3300038443 Bacteria 2717
225 Ga0395901_0218175 3300038443 Bacteria 1994
226 Ga0395901_0513521 3300038443 Bacteria 1218
227 Ga0395901_0726942 3300038443 Bacteria 988
228 Ga0436365_1032030 3300039437 Bacteria 1533
229 Ga0436365_1821209 3300039437 Bacteria 5907
230 Ga0436365_1928257 3300039437 Bacteria 1068
231 Ga0436360_0734341 3300039438 Bacteria 1561
232 Ga0436360_1009318 3300039438 Bacteria 932
233 Ga0436361_0524251 3300039447 Bacteria 1477
234 Ga0436361_0526216 3300039447 Bacteria 1516
235 Ga0436361_0782052 3300039447 Bacteria 1719
236 Ga0436363_0586630 3300039450 Bacteria 1252
237 Ga0436362_1068275 3300039453 Bacteria 2926
238 Ga0451800_0610397 3300041459 Bacteria 796
239 Ga0439455_0026037 3300042012 Bacteria 1425
240 Ga0439458_0021096 3300042157 Bacteria 1507
241 Ga0439464_0016877 3300042439 Bacteria 1977
242 Ga0439460_0042467 3300042461 Bacteria 1340
243 Ga0450916_017190 3300042530 Bacteria 965
244 Ga0453683_0078774 3300044673 Bacteria 2063
245 Ga0466963_0069878 3300044694 Bacteria 2361
246 Ga0466963_0095019 3300044694 Bacteria 2034
247 Ga0466963_0260419 3300044694 Bacteria 1218
248 Ga0466964_0026906 3300044706 Bacteria 2254
249 Ga0466964_0091781 3300044706 Bacteria 1323
250 Ga0453684_0077031 3300044712 Bacteria 4183
251 Ga0453684_0092593 3300044712 Bacteria 3725
252 Ga0466971_0181901 3300044719 Bacteria 988
253 Ga0466960_0025223 3300044901 Bacteria 2689
254 Ga0466960_0112654 3300044901 Bacteria 1415
255 Ga0466959_0274185 3300045049 Bacteria 1159
256 Ga0451576_0043073 3300045051 Bacteria 4764
257 Ga0466967_0121793 3300045976 Bacteria 2411
258 Ga0466967_0527868 3300045976 Bacteria 1160
259 Ga0495582_0219414 3300046473 Bacteria 1088
260 Ga0495596_0258378 3300046500 Bacteria 676
261 Ga0495618_0097636 3300046514 Bacteria 1879
262 Ga0495665_0131866 3300046531 Bacteria 1308
263 Ga0495665_0155083 3300046531 Bacteria 1195
264 Ga0495640_0141160 3300046533 Bacteria 1553
265 Ga0495667_0029552 3300046559 Bacteria 3689
266 Ga0495635_0063883 3300046663 Bacteria 2528
267 Ga0495658_0176432 3300046683 Bacteria 1324
268 Ga0495671_0256500 3300046692 Bacteria 844
269 Ga0495600_0061592 3300046809 Bacteria 2451
270 Ga0495676_0036586 3300047321 Bacteria 4097
271 Ga0495684_0004803 3300047471 Bacteria 10550
272 Ga0495615_0011141 3300048090 Bacteria 1820
273 Ga0496100_0141542 3300048903 Bacteria 1706
274 Ga0496101_0738327 3300048904 Bacteria 777
275 Ga0496106_0172173 3300048909 Bacteria 1716
276 Ga0496107_0411099 3300048910 Bacteria 1006
277 Ga0496108_0546328 3300048911 Bacteria 1011
278 Ga0496109_0408453 3300048912 Bacteria 1283
279 Ga0496111_0148501 3300048914 Bacteria 1738
280 Ga0496111_0176890 3300048914 Bacteria 1586
281 Ga0496115_0206679 3300048918 Bacteria 1622
282 Ga0501321_016053 3300049537 Bacteria 888
283 Ga0501031_0218257 3300049568 Bacteria 1242
284 Ga0501034_0068548 3300049571 Bacteria 3557
285 Ga0501034_0499910 3300049571 Bacteria 1130
286 Ga0501036_0218222 3300049572 Bacteria 1601
287 Ga0501036_0292001 3300049572 Bacteria 1364
288 Ga0501037_0122360 3300049573 Bacteria 1870
289 Ga0501038_0233728 3300049574 Bacteria 1462
290 Ga0501040_0179719 3300049576 Bacteria 1500
291 Ga0501042_0104464 3300049578 Bacteria 2038
292 Ga0501043_0169320 3300049579 Bacteria 1705
293 Ga0501043_0509452 3300049579 Bacteria 898
294 Ga0501046_0149437 3300049580 Bacteria 1763
295 Ga0501046_0219100 3300049580 Bacteria 1410
296 Ga0501048_0019050 3300049582 Bacteria 5042
297 Ga0501069_0105348 3300049585 Bacteria 1603
298 Ga0501071_0031002 3300049587 Bacteria 3786
299 Ga0501071_0166318 3300049587 Bacteria 1650
300 Ga0501072_0075383 3300049588 Bacteria 2668
301 Ga0501072_0094720 3300049588 Bacteria 2372
302 Ga0501073_0204096 3300049589 Bacteria 1367
303 Ga0501075_0031632 3300049591 Bacteria 3929
304 Ga0501075_0290443 3300049591 Bacteria 1246
305 Ga0501076_0399895 3300049592 Bacteria 1129
306 Ga0501077_0198851 3300049593 Bacteria 1273
307 Ga0501081_0242832 3300049743 Bacteria 1313
308 Ga0501083_0047903 3300049744 Bacteria 2886
309 Ga0501045_0049467 3300049824 Bacteria 3065
310 Ga0501045_0129367 3300049824 Bacteria 1877
311 nmdc:mga0yw44_30865_c1 3300050492 Bacteria 3111
312 nmdc:mga0yw44_416745_c1 3300050492 Bacteria 909
313 nmdc:mga09592_350550_c1 3300050508 Bacteria 1277
314 nmdc:mga06r32_424543_c1 3300050510 Bacteria 1310
315 Ga0495612_0230228 3300053078 Bacteria 822
316 Ga0500556_0000495 3300053104 Bacteria 27312
317 Ga0500568_0048803 3300053139 Bacteria 1672
318 Ga0500616_0004626 3300053153 Bacteria 9713
319 Ga0500599_002071 3300053736 Bacteria 2382
320 Ga0501084_0071173 3300054114 Bacteria 2912
321 Ga0501084_0210254 3300054114 Bacteria 1641
322 Ga0590075_035533 3300059424 Bacteria 1270
323 Ga0501082_0218930 3300060353 Bacteria 1656
324 Ga0501082_0388045 3300060353 Bacteria 1218
325 Ga0530510_0004004 3300061734 Bacteria 10175
326 Ga0068869_100215230
327 JGI24739J22299_10061706
328 JGI25406J46586_10029146
329 JGI25407J50210_10001748
330 JGI25407J50210_10012962
331 JGI25407J50210_10014942
332 JGI25407J50210_10046345
333 Ga0070658_10162412
334 Ga0070676_10382745
335 Ga0070683_101096256
336 Ga0070670_100450430
337 Ga0070680_100019632
338 Ga0070680_100048680
339 Ga0068868_100044017
340 Ga0070689_100298440
341 Ga0070687_100059651
342 Ga0070673_100301030
343 Ga0070659_100191856
344 Ga0070659_100252607
345 Ga0070709_10296439
346 Ga0070710_10523606
347 Ga0070701_10187619
348 Ga0070701_10411241
349 Ga0070711_100002288
350 Ga0070711_100379696
351 Ga0070705_100502417
352 Ga0070700_100039719
353 Ga0070700_100571230
354 Ga0070708_100159165
355 Ga0070663_100162656
356 Ga0070678_100186894
357 Ga0070681_10022947
358 Ga0070681_10031635
359 Ga0070681_10109844
360 Ga0070681_10360079
361 Ga0070681_10446677
362 Ga0070685_10058414
363 Ga0070706_100302236
364 Ga0070706_100517529
365 Ga0070698_100238042
366 Ga0070698_100544254
367 Ga0070698_100807884
368 Ga0070679_100021670
369 Ga0070679_100032031
370 Ga0070679_100584922
371 Ga0070679_100828080
372 Ga0070684_100156480
373 Ga0070697_100204896
374 Ga0070697_100263783
375 Ga0068853_100156677
376 Ga0068853_100965926
377 Ga0070672_100121376
378 Ga0070693_100296204
379 Ga0070665_100028564
380 Ga0070664_100103596
381 Ga0068857_100437953
382 Ga0068856_100173722
383 Ga0070702_100003960
384 Ga0068852_100266965
385 Ga0068852_100276404
386 Ga0068852_100343959
387 Ga0068859_100236924
388 Ga0068864_100201664
389 Ga0068861_100020993
390 Ga0068861_100100346
391 Ga0068870_10048760
392 Ga0068858_100074753
393 Ga0068858_100180006
394 Ga0068858_100450126
395 Ga0068860_100026657
396 Ga0068862_100156085
397 Ga0081455_10096173
398 Ga0081538_10003407
399 Ga0081538_10004819
400 Ga0081538_10007363
401 Ga0081538_10008419
402 Ga0081538_10011159
403 Ga0081538_10014954
404 Ga0081538_10016746
405 Ga0081538_10032403
406 Ga0081538_10062071
407 Ga0081538_10066633
408 Ga0081538_10129366
409 Ga0081539_10002042
410 Ga0081539_10149786
411 Ga0075365_10129049
412 Ga0075365_10144165
413 Ga0075432_10165862
414 Ga0070716_100018578
415 Ga0070716_100182151
416 Ga0070712_100013065
417 Ga0070712_100249364
418 Ga0097621_100362075
419 Ga0097621_100663685
420 Ga0075428_100247503
421 Ga0075428_100485142
422 Ga0075434_100824402
423 Ga0075434_101113699
424 Ga0097620_100236925
425 Ga0099794_10115493
426 Ga0105240_10352018
427 Ga0111539_10081527
428 Ga0111539_10743038
429 Ga0105245_10222998
430 Ga0114129_10030455
431 Ga0105243_10169474
432 Ga0105243_10226899
433 Ga0105243_10234216
434 Ga0105239_10743353
435 Ga0157370_10040842
436 Ga0157370_10058306
437 Ga0157369_10198499
438 Ga0157369_10544220
439 Ga0163162_10453128
440 Ga0163163_10151506
441 Ga0157380_10181021
442 Ga0157377_10011750
443 Ga0197907_10948492
444 Ga0206356_10832728
445 Ga0206352_10294115
446 Ga0213872_10000326
447 Ga0213876_10008134
448 Ga0213876_10072916
449 Ga0213875_10001163
450 Ga0213875_10010338
451 Ga0207426_1021348
452 Ga0207710_10224400
453 Ga0207688_10044848
454 Ga0207699_10047224
455 Ga0207643_10101077
456 Ga0207705_10244756
457 Ga0207684_10257377
458 Ga0207707_10092943
459 Ga0207707_10208851
460 Ga0207695_10111891
461 Ga0207693_10082425
462 Ga0207693_10201025
463 Ga0207663_10635336
464 Ga0207660_10045961
465 Ga0207652_10016829
466 Ga0207652_10107718
467 Ga0207694_10189371
468 Ga0207659_10585413
469 Ga0207700_10373707
470 Ga0207706_10104694
471 Ga0207706_10133827
472 Ga0207706_10135718
473 Ga0207709_10059015
474 Ga0207665_10093490
475 Ga0207665_10165862
476 Ga0207691_10136101
477 Ga0207679_10168583
478 Ga0207679_10578413
479 Ga0207712_10098094
480 Ga0207703_10371834
481 Ga0207639_10215473
482 Ga0207678_10149188
483 Ga0207708_10039146
484 Ga0207708_10145641
485 Ga0207702_10144049
486 Ga0207648_10094974
487 Ga0207676_10055896
488 Ga0207674_10462251
489 Ga0207683_10175632
490 Ga0207683_10482995
491 Ga0207698_10226836
492 Ga0207428_10457204
493 Ga0265330_10063625
494 Ga0265327_10017374
495 Ga0265327_10017710
496 Ga0265327_10134442
497 Ga0265316_10086332
498 Ga0307408_100128607
499 Ga0307408_100196918
500 Ga0307408_100238234
501 Ga0307405_10498946
502 Ga0307413_10007576
503 Ga0307413_10207326
504 Ga0307413_10384725
505 Ga0307410_10020361
506 Ga0307410_10131742
507 Ga0307410_10395352
508 Ga0307410_10815924
509 Ga0326468_10006288
510 Ga0307406_10108833
511 Ga0307407_10015344
512 Ga0307407_10072259
513 Ga0307407_10332218
514 Ga0307409_100000534
515 Ga0307409_100032385
516 Ga0307409_100036124
517 Ga0307409_100088264
518 Ga0307409_100196349
519 Ga0307416_100018928
520 Ga0307416_100021032
521 Ga0307416_100393668
522 Ga0307416_100594665
523 Ga0307416_101224164
524 Ga0307414_10089137
525 Ga0307411_10301548
526 Ga0307415_100000877
527 Ga0307415_100003728
528 Ga0307415_100723277
529 Ga0373954_0245789
530 Ga0373957_0033151
531 Ga0373943_0208344
532 Ga0373935_0341761
533 Ga0373927_0044867
534 Ga0373933_0051062
535 Ga0373947_0079137
536 Ga0373937_0008310
537 Ga0373937_0132323
538 Ga0373937_0600340
539 Ga0373925_0321181
540 Ga0395899_0375974
541 Ga0395900_0087161
542 Ga0395900_0283034
543 Ga0395900_0443703
544 Ga0395898_0029500
545 Ga0395898_0736782
546 Ga0436364_0803086
547 Ga0436364_0849938
548 Ga0395901_0105378
549 Ga0395901_0123800
550 Ga0395901_0218175
551 Ga0395901_0513521
552 Ga0395901_0726942
553 Ga0436365_1032030
554 Ga0436365_1821209
555 Ga0436365_1928257
556 Ga0436360_0734341
557 Ga0436360_1009318
558 Ga0436361_0524251
559 Ga0436361_0526216
560 Ga0436361_0782052
561 Ga0436363_0586630
562 Ga0436362_1068275
563 Ga0451800_0610397
564 Ga0439455_0026037
565 Ga0439458_0021096
566 Ga0439464_0016877
567 Ga0439460_0042467
568 Ga0450916_017190
569 Ga0453683_0078774
570 Ga0466963_0069878
571 Ga0466963_0095019
572 Ga0466963_0260419
573 Ga0466964_0026906
574 Ga0466964_0091781
575 Ga0453684_0077031
576 Ga0453684_0092593
577 Ga0466971_0181901
578 Ga0466960_0025223
579 Ga0466960_0112654
580 Ga0466959_0274185
581 Ga0451576_0043073
582 Ga0466967_0121793
583 Ga0466967_0527868
584 Ga0495582_0219414
585 Ga0495596_0258378
586 Ga0495618_0097636
587 Ga0495665_0131866
588 Ga0495665_0155083
589 Ga0495640_0141160
590 Ga0495667_0029552
591 Ga0495635_0063883
592 Ga0495658_0176432
593 Ga0495671_0256500
594 Ga0495600_0061592
595 Ga0495676_0036586
596 Ga0495684_0004803
597 Ga0495615_0011141
598 Ga0496100_0141542
599 Ga0496101_0738327
600 Ga0496106_0172173
601 Ga0496107_0411099
602 Ga0496108_0546328
603 Ga0496109_0408453
604 Ga0496111_0148501
605 Ga0496111_0176890
606 Ga0496115_0206679
607 Ga0501321_016053
608 Ga0501031_0218257
609 Ga0501034_0068548
610 Ga0501034_0499910
611 Ga0501036_0218222
612 Ga0501036_0292001
613 Ga0501037_0122360
614 Ga0501038_0233728
615 Ga0501040_0179719
616 Ga0501042_0104464
617 Ga0501043_0169320
618 Ga0501043_0509452
619 Ga0501046_0149437
620 Ga0501046_0219100
621 Ga0501048_0019050
622 Ga0501069_0105348
623 Ga0501071_0031002
624 Ga0501071_0166318
625 Ga0501072_0075383
626 Ga0501072_0094720
627 Ga0501073_0204096
628 Ga0501075_0031632
629 Ga0501075_0290443
630 Ga0501076_0399895
631 Ga0501077_0198851
632 Ga0501081_0242832
633 Ga0501083_0047903
634 Ga0501045_0049467
635 Ga0501045_0129367
636 nmdc:mga0yw44_30865_c1
637 nmdc:mga0yw44_416745_c1
638 nmdc:mga09592_350550_c1
639 nmdc:mga06r32_424543_c1
640 Ga0495612_0230228
641 Ga0500556_0000495
642 Ga0500568_0048803
643 Ga0500616_0004626
644 Ga0500599_002071
645 Ga0501084_0071173
646 Ga0501084_0210254
647 Ga0590075_035533
648 Ga0501082_0218930
649 Ga0501082_0388045
650 Ga0530510_0004004

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00687

Ribosomal_L1

Ribosomal protein L1p/L10e family

30

221

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
2vpl-assembly1.cif.gz_A the structure of the complex between the first domain of l1 protein from thermus thermophilus and mrna from methanococcus jannaschii 0.9665 3 228
6wdj-assembly1.cif.gz_a cryo-em of elongating ribosome with ef-tu*gtp elucidates trna proofreading (non-cognate structure v-a1) 0.9615 3 226
4wpo-assembly1.cif.gz_AC crystal structure of the thermus thermophilus 70s ribosome in complex with elongation factor g in the pre-translocational state 0.9577 4 227
6wdj-assembly1.cif.gz_a cryo-em of elongating ribosome with ef-tu*gtp elucidates trna proofreading (non-cognate structure v-a1) 0.9546 3 226
4wpo-assembly1.cif.gz_AC crystal structure of the thermus thermophilus 70s ribosome in complex with elongation factor g in the pre-translocational state 0.9509 4 227
ID Description Score Start End Superfamily
af_Q60E59_194_280_3.40.50.790 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Ribosomal protein L1/L10, domain II 0.9822 73 160 3.40.50.790
af_Q60E59_194_280_3.40.50.790 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Ribosomal protein L1/L10, domain II 0.9712 73 160 3.40.50.790
af_P9WHC7_16_229_3.30.190.20 Alpha Beta;2-Layer Sandwich;Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase;Ribosomal protein L1/L10, rRNA-binding domain 0.9683 16 228 3.30.190.20
2wrrC01 Alpha Beta;2-Layer Sandwich;Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase;Ribosomal protein L1/L10, rRNA-binding domain 0.9642 16 227 3.30.190.20
af_P9WHC7_16_229_3.30.190.20 Alpha Beta;2-Layer Sandwich;Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase;Ribosomal protein L1/L10, rRNA-binding domain 0.9551 16 228 3.30.190.20
ID Description Score Start End GO Terms
AF-A0A7W0S1E4-F1-model_v4 Ribosomal protein 0.9831 37 241 GO:0000049
GO:0003735
GO:0006412
GO:0006417
GO:0015934
GO:0019843
AF-A0A432G6A5-F1-model_v4 Ribosomal protein 0.9828 49 228 GO:0003735
GO:0006412
GO:0006417
GO:0015934
GO:0019843
AF-A0A537Z3Y9-F1-model_v4 Ribosomal protein 0.9817 23 241 GO:0000049
GO:0003735
GO:0006412
GO:0006417
GO:0015934
GO:0019843
AF-A0A2G6K806-F1-model_v4 Ribosomal protein 0.9811 4 209 GO:0003735
GO:0006412
GO:0006417
GO:0015934
GO:0019843
AF-Q5FTX4-F1-model_v4 Large ribosomal subunit protein uL1 (50S ribosomal protein L1) 0.9806 1 231 GO:0000049
GO:0003735
GO:0006412
GO:0006417
GO:0019843
GO:0022625

Map