F407627

General Info

Members Datasets Scaffolds Average Seq Length
324 174 648 196

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|643348555|643392638
Length 214
Sequence HGDPGQSDLGPQAHLGPLIDLGADPFALFAAWMRDAEAAEPVDPNAMALATATPDGRPSVRMILLKGADRRGFVFYTNLESRKAGELTENPHAALLFHWKSVARQIRIEGSVERVSDAEADAYFASRSRMSRLGAIASDQSRPLPDRAIFEHRLADLEERYPDGDGAIPRPANWSGFRLVPDRIEFWQNRPHRLHDRAVWRRAETGWETTRLYP

Samples

Sample ID Description Type Environment
1 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
6 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
7 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
8 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
11 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
12 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
13 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
16 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
17 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
18 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
19 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
20 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
21 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
22 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
23 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
24 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
31 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
36 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
37 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
38 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
39 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
40 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
47 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
48 3300012512 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.old.270510 Metagenome Rhizosphere
49 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
50 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
51 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
52 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
53 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
54 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
55 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
88 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
89 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
90 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
91 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
92 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
93 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
94 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
95 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
96 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
97 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
98 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
99 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
100 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
101 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
102 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
103 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
104 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
105 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
106 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
107 3300041463 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_7 MetaG Metagenome Rhizoplane
108 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
109 3300042116 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126F_E14_082316_1792 Metagenome Rhizosphere
110 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
111 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
112 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
113 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
114 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
115 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
116 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
117 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
118 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
119 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
120 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
121 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
122 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
123 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
124 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
125 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
126 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
127 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
128 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
129 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
130 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
131 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
132 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
133 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
134 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
135 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
136 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
137 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
138 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
139 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
140 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
141 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
142 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
143 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
144 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
145 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
146 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
147 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
148 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
149 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
150 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
153 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
154 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
155 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
156 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
157 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
158 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
159 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
160 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
161 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
162 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
163 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
164 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
165 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
166 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
167 643348555 Gluconacetobacter diazotrophicus PA1 5 Isolate Unclassified
168 2582581305 Rhizorhabdus wittichii YR128 Isolate Rhizosphere
169 2751185897 Sphingomonas panacis DCY99 Isolate Unclassified
170 2885427238 Sphingomonas mesophila SYSUP0001 Isolate Stem Tuber
171 2909399089 Nguyenibacter vanlangensis LMG 31431 Isolate Unclassified
172 2984555340 Sphingomonas sp. SORGH_AS789 Isolate Aerial Root
173 2993356040 Sphingomonas sp. SORGH_AS742 Isolate Aerial Root
174 641228493 Gluconacetobacter diazotrophicus PA1 5 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.53
Metatranscriptomes 0
Isolates 2.47

Biome Distribution

Category Percentage (%)
Aerial Root 0.62
Bulb 0
Endosphere 3.4
Nodule 0
Rhizoplane 1.85
Rhizosphere 87.35
Stem 0
Stem Tuber 0.31
Unclassified 2.47

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1018226 3300001915 Bacteria 1124
2 JGI24739J22299_10004082 3300001989 Bacteria 5583
3 JGI24739J22299_10011965 3300001989 Bacteria 3190
4 JGI24737J22298_10004021 3300001990 Bacteria 5140
5 JGI24737J22298_10006938 3300001990 Bacteria 3842
6 JGI24737J22298_10076001 3300001990 Bacteria 1001
7 JGI24735J21928_10073044 3300002067 Bacteria 983
8 JGI24738J21930_10001506 3300002075 Bacteria 6457
9 JGI24738J21930_10003114 3300002075 Bacteria 4244
10 JGI24744J21845_10001744 3300002077 Bacteria 4365
11 rootH1_10029571 3300003323 Bacteria 1458
12 Ga0070658_10000431 3300005327 Bacteria 36455
13 Ga0070658_10006937 3300005327 Bacteria 9149
14 Ga0070658_10043061 3300005327 Bacteria 3648
15 Ga0070658_10148166 3300005327 Bacteria 1964
16 Ga0070658_10200748 3300005327 Bacteria 1682
17 Ga0070658_10344071 3300005327 Bacteria 1276
18 Ga0070683_100031687 3300005329 Bacteria 4811
19 Ga0070670_100010747 3300005331 Bacteria 7820
20 Ga0070677_10061242 3300005333 Bacteria 1553
21 Ga0070680_100160658 3300005336 Unclassified 1888
22 Ga0070660_100000053 3300005339 Bacteria 67349
23 Ga0070660_100026040 3300005339 Bacteria 4353
24 Ga0070660_100921722 3300005339 Bacteria 737
25 Ga0070661_100717494 3300005344 Bacteria 816
26 Ga0070692_10010899 3300005345 Bacteria 4158
27 Ga0070692_10013250 3300005345 Bacteria 3840
28 Ga0070668_100012205 3300005347 Bacteria 6400
29 Ga0070668_100047489 3300005347 Bacteria 3301
30 Ga0070669_100005631 3300005353 Bacteria 9047
31 Ga0070675_100024083 3300005354 Bacteria 4873
32 Ga0070671_100058916 3300005355 Bacteria 3196
33 Ga0070674_100040825 3300005356 Bacteria 3141
34 Ga0070673_100285857 3300005364 Bacteria 1448
35 Ga0070659_100037420 3300005366 Bacteria 3783
36 Ga0070659_100085578 3300005366 Bacteria 2521
37 Ga0070659_100144441 3300005366 Bacteria 1938
38 Ga0070659_100260401 3300005366 Bacteria 1439
39 Ga0070659_100282978 3300005366 Bacteria 1380
40 Ga0070663_100001267 3300005455 Bacteria 13883
41 Ga0070663_100008434 3300005455 Bacteria 6340
42 Ga0070678_100038971 3300005456 Bacteria 3349
43 Ga0070678_100446172 3300005456 Bacteria 1132
44 Ga0070662_100007464 3300005457 Bacteria 7089
45 Ga0070662_100008174 3300005457 Bacteria 6813
46 Ga0070662_100077219 3300005457 Bacteria 2471
47 Ga0070681_10324100 3300005458 Bacteria 1450
48 Ga0070681_11049630 3300005458 Unclassified 735
49 Ga0070679_100412804 3300005530 Bacteria 1295
50 Ga0068853_100048789 3300005539 Bacteria 3637
51 Ga0068855_100000371 3300005563 Bacteria 55533
52 Ga0068855_100000433 3300005563 Bacteria 51890
53 Ga0068855_100009411 3300005563 Bacteria 11799
54 Ga0070664_100046378 3300005564 Bacteria 3670
55 Ga0070664_100282498 3300005564 Bacteria 1497
56 Ga0068854_100004969 3300005578 Bacteria 8383
57 Ga0068854_100005082 3300005578 Bacteria 8287
58 Ga0068854_100008000 3300005578 Bacteria 6773
59 Ga0068854_100516724 3300005578 Bacteria 1008
60 Ga0068856_100322509 3300005614 Bacteria 1562
61 Ga0068856_100560855 3300005614 Bacteria 1163
62 Ga0068852_100005504 3300005616 Bacteria 9073
63 Ga0068859_100017752 3300005617 Bacteria 7153
64 Ga0068851_10081159 3300005834 Bacteria 1694
65 Ga0068862_100128343 3300005844 Bacteria 2241
66 Ga0070717_10380260 3300006028 Bacteria 1266
67 Ga0068871_100014824 3300006358 Bacteria 5821
68 Ga0075434_100090295 3300006871 Bacteria 3065
69 Ga0097620_100017752 3300006931 Bacteria 7153
70 Ga0105240_10220034 3300009093 Bacteria 2213
71 Ga0111539_10016949 3300009094 Bacteria 9018
72 Ga0111539_10206421 3300009094 Bacteria 2290
73 Ga0111539_10620825 3300009094 Unclassified 1259
74 Ga0105241_10060014 3300009174 Bacteria 2925
75 Ga0105237_10202079 3300009545 Bacteria 1987
76 Ga0105238_10014596 3300009551 Bacteria 7943
77 Ga0105238_10352288 3300009551 Bacteria 1461
78 Ga0105238_10449047 3300009551 Bacteria 1286
79 Ga0105249_10652670 3300009553 Unclassified 1110
80 Ga0105239_10014943 3300010375 Bacteria 8605
81 Ga0105239_10609786 3300010375 Bacteria 1245
82 Ga0157327_1006217 3300012512 Bacteria 998
83 Ga0157373_10005351 3300013100 Bacteria 9646
84 Ga0157373_10049741 3300013100 Bacteria 2986
85 Ga0157373_10587600 3300013100 Bacteria 810
86 Ga0157371_10000468 3300013102 Bacteria 49508
87 Ga0157371_10017502 3300013102 Bacteria 5323
88 Ga0157371_10086507 3300013102 Bacteria 2220
89 Ga0157371_10122970 3300013102 Bacteria 1845
90 Ga0157370_10187243 3300013104 Bacteria 1921
91 Ga0157370_10264115 3300013104 Bacteria 1591
92 Ga0157370_10343170 3300013104 Bacteria 1376
93 Ga0157370_10797437 3300013104 Bacteria 859
94 Ga0157372_10127289 3300013307 Bacteria 2929
95 Ga0157380_10125463 3300014326 Bacteria 2181
96 Ga0157377_10284247 3300014745 Bacteria 1085
97 Ga0207697_10039085 3300025315 Bacteria 1947
98 Ga0207656_10052456 3300025321 Bacteria 1766
99 Ga0207688_10040730 3300025901 Bacteria 2582
100 Ga0207647_10008995 3300025904 Bacteria 7116
101 Ga0207643_10060591 3300025908 Bacteria 2161
102 Ga0207705_10000526 3300025909 Bacteria 32452
103 Ga0207705_10002377 3300025909 Bacteria 14544
104 Ga0207705_10055473 3300025909 Bacteria 2857
105 Ga0207705_10165325 3300025909 Bacteria 1664
106 Ga0207654_10125891 3300025911 Bacteria 1615
107 Ga0207695_10304719 3300025913 Bacteria 1484
108 Ga0207660_10225678 3300025917 Unclassified 1471
109 Ga0207657_10000058 3300025919 Bacteria 103811
110 Ga0207657_10000088 3300025919 Bacteria 88065
111 Ga0207657_10139828 3300025919 Bacteria 1979
112 Ga0207694_10012197 3300025924 Bacteria 6482
113 Ga0207694_10100195 3300025924 Bacteria 2295
114 Ga0207694_10273561 3300025924 Bacteria 1386
115 Ga0207650_10234519 3300025925 Bacteria 1481
116 Ga0207664_10097006 3300025929 Bacteria 2428
117 Ga0207690_10106742 3300025932 Bacteria 2010
118 Ga0207706_10001245 3300025933 Bacteria 25648
119 Ga0207706_10008560 3300025933 Bacteria 9430
120 Ga0207669_10029599 3300025937 Bacteria 3031
121 Ga0207691_10075489 3300025940 Bacteria 3039
122 Ga0207689_10221515 3300025942 Bacteria 1563
123 Ga0207661_10044225 3300025944 Bacteria 3519
124 Ga0207679_10025857 3300025945 Bacteria 4042
125 Ga0207667_10000017 3300025949 Bacteria 390654
126 Ga0207667_10000114 3300025949 Bacteria 128923
127 Ga0207667_10010964 3300025949 Bacteria 10563
128 Ga0207651_10239160 3300025960 Bacteria 1479
129 Ga0207668_10001113 3300025972 Bacteria 16006
130 Ga0207640_10000695 3300025981 Bacteria 19606
131 Ga0207640_10003802 3300025981 Bacteria 8134
132 Ga0207640_10234626 3300025981 Bacteria 1414
133 Ga0207658_10068867 3300025986 Bacteria 2672
134 Ga0207639_10084075 3300026041 Bacteria 2527
135 Ga0207639_10139864 3300026041 Bacteria 2015
136 Ga0207678_10000656 3300026067 Bacteria 31806
137 Ga0207678_10003213 3300026067 Bacteria 14771
138 Ga0207702_10022504 3300026078 Bacteria 5225
139 Ga0207702_10272769 3300026078 Bacteria 1596
140 Ga0207675_100332921 3300026118 Unclassified 1485
141 Ga0207698_10001503 3300026142 Bacteria 13579
142 Ga0207698_10097698 3300026142 Bacteria 2424
143 Ga0207698_10388424 3300026142 Bacteria 1330
144 Ga0209974_10001565 3300027876 Bacteria 8308
145 Ga0209974_10012333 3300027876 Bacteria 2858
146 Ga0268265_10037630 3300028380 Bacteria 3553
147 Ga0268265_10056197 3300028380 Bacteria 2993
148 Ga0307405_10035059 3300031731 Bacteria 2993
149 Ga0307405_10041616 3300031731 Bacteria 2791
150 Ga0307405_10057967 3300031731 Bacteria 2435
151 Ga0307413_10004015 3300031824 Bacteria 6324
152 Ga0307413_10017122 3300031824 Bacteria 3768
153 Ga0307413_10018869 3300031824 Bacteria 3630
154 Ga0307413_10071623 3300031824 Bacteria 2185
155 Ga0307413_10075433 3300031824 Bacteria 2140
156 Ga0307413_10530505 3300031824 Bacteria 951
157 Ga0307413_10766800 3300031824 Bacteria 808
158 Ga0307410_10013033 3300031852 Bacteria 4834
159 Ga0307410_10032493 3300031852 Bacteria 3359
160 Ga0307410_10036847 3300031852 Bacteria 3189
161 Ga0307410_10051884 3300031852 Bacteria 2767
162 Ga0307410_10088901 3300031852 Bacteria 2188
163 Ga0307410_10152252 3300031852 Bacteria 1723
164 Ga0307410_10297966 3300031852 Bacteria 1271
165 Ga0307410_10787399 3300031852 Bacteria 808
166 Ga0307410_10971099 3300031852 Bacteria 731
167 Ga0307406_10019665 3300031901 Bacteria 3966
168 Ga0307406_10043016 3300031901 Bacteria 2823
169 Ga0307406_10086861 3300031901 Bacteria 2095
170 Ga0307406_10094419 3300031901 Bacteria 2022
171 Ga0307406_10101390 3300031901 Bacteria 1962
172 Ga0307407_10009653 3300031903 Bacteria 4506
173 Ga0307407_10033165 3300031903 Bacteria 2815
174 Ga0307412_10010865 3300031911 Bacteria 5257
175 Ga0307412_10085131 3300031911 Bacteria 2196
176 Ga0307412_10270991 3300031911 Bacteria 1328
177 Ga0307412_10427840 3300031911 Bacteria 1084
178 Ga0307412_10912033 3300031911 Bacteria 771
179 Ga0307409_100016046 3300031995 Bacteria 4940
180 Ga0307409_100096300 3300031995 Bacteria 2441
181 Ga0307409_100261918 3300031995 Bacteria 1587
182 Ga0307409_100760071 3300031995 Bacteria 974
183 Ga0307409_100856256 3300031995 Bacteria 920
184 Ga0307409_100867609 3300031995 Bacteria 914
185 Ga0307416_100013587 3300032002 Bacteria 5542
186 Ga0307416_100160564 3300032002 Bacteria 2077
187 Ga0307416_100163172 3300032002 Bacteria 2063
188 Ga0307416_100194250 3300032002 Bacteria 1918
189 Ga0307416_100327657 3300032002 Bacteria 1537
190 Ga0307416_100501083 3300032002 Bacteria 1279
191 Ga0307416_101704254 3300032002 Bacteria 735
192 Ga0307414_10002311 3300032004 Bacteria 9959
193 Ga0307414_10005732 3300032004 Bacteria 6860
194 Ga0307414_10240710 3300032004 Bacteria 1498
195 Ga0307414_11015993 3300032004 Bacteria 764
196 Ga0307411_10044323 3300032005 Bacteria 2852
197 Ga0307411_10044334 3300032005 Bacteria 2852
198 Ga0307411_10085444 3300032005 Bacteria 2186
199 Ga0307411_10637126 3300032005 Bacteria 921
200 Ga0307415_100012743 3300032126 Bacteria 4874
201 Ga0307415_100038212 3300032126 Bacteria 3162
202 Ga0307415_100376299 3300032126 Bacteria 1204
203 Ga0373925_0046426 3300037068 Bacteria 3230
204 Ga0395899_0001324 3300037312 Bacteria 21279
205 Ga0395899_0026342 3300037312 Bacteria 4388
206 Ga0395899_0041561 3300037312 Bacteria 3435
207 Ga0395899_0072116 3300037312 Bacteria 2527
208 Ga0395900_0000075 3300037418 Bacteria 183525
209 Ga0395900_0000124 3300037418 Bacteria 133210
210 Ga0395900_0002472 3300037418 Bacteria 20338
211 Ga0395900_0114190 3300037418 Bacteria 2772
212 Ga0395900_0158134 3300037418 Bacteria 2313
213 Ga0395900_0172543 3300037418 Bacteria 2201
214 Ga0395900_0364902 3300037418 Bacteria 1415
215 Ga0395900_0591685 3300037418 Bacteria 1051
216 Ga0395898_0000055 3300037466 Bacteria 278557
217 Ga0395898_0042869 3300037466 Bacteria 4462
218 Ga0395898_0107525 3300037466 Bacteria 2675
219 Ga0395898_0230414 3300037466 Bacteria 1767
220 Ga0395905_0000089 3300037471 Bacteria 152196
221 Ga0395905_0001330 3300037471 Bacteria 30159
222 Ga0395905_0100615 3300037471 Bacteria 2714
223 Ga0395905_0182246 3300037471 Bacteria 1972
224 Ga0395905_0336308 3300037471 Bacteria 1401
225 Ga0395905_0824234 3300037471 Bacteria 831
226 Ga0395905_1144963 3300037471 Bacteria 681
227 Ga0395901_0000031 3300038443 Bacteria 241733
228 Ga0395901_0000486 3300038443 Bacteria 46185
229 Ga0395901_0000874 3300038443 Bacteria 33249
230 Ga0395901_0316367 3300038443 Bacteria 1616
231 Ga0395901_0407679 3300038443 Bacteria 1396
232 Ga0395901_0437256 3300038443 Bacteria 1339
233 Ga0436361_0723180 3300039447 Bacteria 1635
234 Ga0451793_1016062 3300041452 Bacteria 1612
235 Ga0451802_0522768 3300041460 Bacteria 2453
236 Ga0451804_0363958 3300041463 Bacteria 1618
237 Ga0451807_0417430 3300041486 Bacteria 3102
238 Ga0450912_006759 3300042116 Bacteria 918
239 Ga0451577_0178046 3300042876 Unclassified 1917
240 Ga0466972_0029872 3300044658 Bacteria 2683
241 Ga0453683_0000466 3300044673 Bacteria 46503
242 Ga0453683_0028346 3300044673 Bacteria 3547
243 Ga0453683_0216180 3300044673 Bacteria 1218
244 Ga0466965_0053867 3300044683 Bacteria 2000
245 Ga0466965_0068113 3300044683 Bacteria 1787
246 Ga0466966_0041664 3300044684 Bacteria 2950
247 Ga0466961_0068490 3300044693 Bacteria 2253
248 Ga0466963_0027168 3300044694 Bacteria 3663
249 Ga0466964_0028302 3300044706 Bacteria 2207
250 Ga0453684_0055988 3300044712 Bacteria 5120
251 Ga0466971_0030750 3300044719 Bacteria 2403
252 Ga0466957_0052636 3300044842 Bacteria 2479
253 Ga0466960_0003484 3300044901 Bacteria 6052
254 Ga0466960_0003836 3300044901 Bacteria 5826
255 Ga0466959_0006592 3300045049 Bacteria 8060
256 Ga0466959_0328435 3300045049 Bacteria 1045
257 Ga0451576_0027785 3300045051 Bacteria 6072
258 Ga0451576_0301541 3300045051 Bacteria 1676
259 Ga0466958_0044542 3300045836 Bacteria 2674
260 Ga0466958_0154633 3300045836 Bacteria 1447
261 Ga0466967_0065071 3300045976 Bacteria 3244
262 Ga0466967_0137311 3300045976 Bacteria 2274
263 Ga0495607_0141176 3300046501 Bacteria 1242
264 Ga0495606_0000594 3300046507 Bacteria 57221
265 Ga0495606_0196805 3300046507 Bacteria 1151
266 Ga0495643_0021155 3300046522 Bacteria 3738
267 Ga0495621_0119609 3300046539 Bacteria 1017
268 Ga0495597_0010371 3300046542 Bacteria 4556
269 Ga0495668_0022059 3300046616 Bacteria 3642
270 Ga0495668_0039699 3300046616 Bacteria 2628
271 Ga0495625_0313303 3300046660 Bacteria 1001
272 Ga0495669_0004823 3300046684 Bacteria 5596
273 Ga0495669_0009454 3300046684 Bacteria 4111
274 Ga0495669_0029560 3300046684 Bacteria 2403
275 Ga0495669_0229510 3300046684 Bacteria 890
276 Ga0495670_0167331 3300046691 Unclassified 1157
277 Ga0495671_0063608 3300046692 Bacteria 1817
278 Ga0495673_0003349 3300047469 Bacteria 10608
279 Ga0495686_0000063 3300047472 Bacteria 228575
280 Ga0495686_0000669 3300047472 Bacteria 46516
281 Ga0496100_0425407 3300048903 Bacteria 1015
282 Ga0496114_0021927 3300048917 Bacteria 5200
283 Ga0496117_0008232 3300048920 Bacteria 9939
284 Ga0496117_0056098 3300048920 Bacteria 2747
285 Ga0496118_0001340 3300048921 Bacteria 37345
286 Ga0496118_0038838 3300048921 Bacteria 3809
287 Ga0496118_0054088 3300048921 Bacteria 3044
288 Ga0496119_0027511 3300048922 Bacteria 3906
289 Ga0496120_0068805 3300048923 Bacteria 1951
290 Ga0496121_0039086 3300048924 Bacteria 4189
291 Ga0496122_0138369 3300048925 Bacteria 1529
292 Ga0496123_0001272 3300048926 Bacteria 36131
293 Ga0496123_0039196 3300048926 Bacteria 3317
294 Ga0496124_0071537 3300048927 Bacteria 2874
295 Ga0496124_0075857 3300048927 Bacteria 2777
296 Ga0496124_0173064 3300048927 Bacteria 1670
297 Ga0496125_0007404 3300048928 Bacteria 11675
298 Ga0496126_0035099 3300048929 Bacteria 4703
299 Ga0501036_0125170 3300049572 Bacteria 2171
300 Ga0501047_0158644 3300049581 Bacteria 2134
301 Ga0501047_0623112 3300049581 Bacteria 899
302 Ga0501044_0022398 3300049823 Bacteria 6733
303 nmdc:mga07m45_37089_c2 3300050496 Bacteria 2353
304 nmdc:mga08y16_297710_c1 3300050511 Bacteria 1663
305 nmdc:mga0n895_80180_c1 3300050512 Bacteria 3252
306 Ga0500651_0000772 3300053093 Bacteria 15647
307 Ga0500618_005255 3300053125 Bacteria 3973
308 Ga0500642_0008573 3300053130 Bacteria 3510
309 Ga0500655_000074 3300053133 Bacteria 26780
310 Ga0500658_0000022 3300053134 Bacteria 129341
311 Ga0500559_0063366 3300053136 Bacteria 1652
312 Ga0500590_000030 3300053148 Bacteria 35221
313 Ga0500622_0011319 3300053156 Bacteria 4864
314 Ga0500639_125356 3300053163 Bacteria 1226
315 Ga0500570_000481 3300053724 Bacteria 15431
316 Ga0466962_0007169 3300061719 Bacteria 5339
317 643392638 643348555 Bacteria 3914947
318 2585260152 2582581305 Bacteria 4895574
319 2753766908 2751185897 Bacteria 5322941
320 2885427349 2885427238 Bacteria 2291351
321 2909400379 2909399089 Bacteria 3922598
322 2984555961 2984555340 Bacteria 4247089
323 2993356942 2993356040 Bacteria 4247105
324 641337190 641228493 Bacteria 3999591
325 JGI24741J21665_1018226
326 JGI24739J22299_10004082
327 JGI24739J22299_10011965
328 JGI24737J22298_10004021
329 JGI24737J22298_10006938
330 JGI24737J22298_10076001
331 JGI24735J21928_10073044
332 JGI24738J21930_10001506
333 JGI24738J21930_10003114
334 JGI24744J21845_10001744
335 rootH1_10029571
336 Ga0070658_10000431
337 Ga0070658_10006937
338 Ga0070658_10043061
339 Ga0070658_10148166
340 Ga0070658_10200748
341 Ga0070658_10344071
342 Ga0070683_100031687
343 Ga0070670_100010747
344 Ga0070677_10061242
345 Ga0070680_100160658
346 Ga0070660_100000053
347 Ga0070660_100026040
348 Ga0070660_100921722
349 Ga0070661_100717494
350 Ga0070692_10010899
351 Ga0070692_10013250
352 Ga0070668_100012205
353 Ga0070668_100047489
354 Ga0070669_100005631
355 Ga0070675_100024083
356 Ga0070671_100058916
357 Ga0070674_100040825
358 Ga0070673_100285857
359 Ga0070659_100037420
360 Ga0070659_100085578
361 Ga0070659_100144441
362 Ga0070659_100260401
363 Ga0070659_100282978
364 Ga0070663_100001267
365 Ga0070663_100008434
366 Ga0070678_100038971
367 Ga0070678_100446172
368 Ga0070662_100007464
369 Ga0070662_100008174
370 Ga0070662_100077219
371 Ga0070681_10324100
372 Ga0070681_11049630
373 Ga0070679_100412804
374 Ga0068853_100048789
375 Ga0068855_100000371
376 Ga0068855_100000433
377 Ga0068855_100009411
378 Ga0070664_100046378
379 Ga0070664_100282498
380 Ga0068854_100004969
381 Ga0068854_100005082
382 Ga0068854_100008000
383 Ga0068854_100516724
384 Ga0068856_100322509
385 Ga0068856_100560855
386 Ga0068852_100005504
387 Ga0068859_100017752
388 Ga0068851_10081159
389 Ga0068862_100128343
390 Ga0070717_10380260
391 Ga0068871_100014824
392 Ga0075434_100090295
393 Ga0097620_100017752
394 Ga0105240_10220034
395 Ga0111539_10016949
396 Ga0111539_10206421
397 Ga0111539_10620825
398 Ga0105241_10060014
399 Ga0105237_10202079
400 Ga0105238_10014596
401 Ga0105238_10352288
402 Ga0105238_10449047
403 Ga0105249_10652670
404 Ga0105239_10014943
405 Ga0105239_10609786
406 Ga0157327_1006217
407 Ga0157373_10005351
408 Ga0157373_10049741
409 Ga0157373_10587600
410 Ga0157371_10000468
411 Ga0157371_10017502
412 Ga0157371_10086507
413 Ga0157371_10122970
414 Ga0157370_10187243
415 Ga0157370_10264115
416 Ga0157370_10343170
417 Ga0157370_10797437
418 Ga0157372_10127289
419 Ga0157380_10125463
420 Ga0157377_10284247
421 Ga0207697_10039085
422 Ga0207656_10052456
423 Ga0207688_10040730
424 Ga0207647_10008995
425 Ga0207643_10060591
426 Ga0207705_10000526
427 Ga0207705_10002377
428 Ga0207705_10055473
429 Ga0207705_10165325
430 Ga0207654_10125891
431 Ga0207695_10304719
432 Ga0207660_10225678
433 Ga0207657_10000058
434 Ga0207657_10000088
435 Ga0207657_10139828
436 Ga0207694_10012197
437 Ga0207694_10100195
438 Ga0207694_10273561
439 Ga0207650_10234519
440 Ga0207664_10097006
441 Ga0207690_10106742
442 Ga0207706_10001245
443 Ga0207706_10008560
444 Ga0207669_10029599
445 Ga0207691_10075489
446 Ga0207689_10221515
447 Ga0207661_10044225
448 Ga0207679_10025857
449 Ga0207667_10000017
450 Ga0207667_10000114
451 Ga0207667_10010964
452 Ga0207651_10239160
453 Ga0207668_10001113
454 Ga0207640_10000695
455 Ga0207640_10003802
456 Ga0207640_10234626
457 Ga0207658_10068867
458 Ga0207639_10084075
459 Ga0207639_10139864
460 Ga0207678_10000656
461 Ga0207678_10003213
462 Ga0207702_10022504
463 Ga0207702_10272769
464 Ga0207675_100332921
465 Ga0207698_10001503
466 Ga0207698_10097698
467 Ga0207698_10388424
468 Ga0209974_10001565
469 Ga0209974_10012333
470 Ga0268265_10037630
471 Ga0268265_10056197
472 Ga0307405_10035059
473 Ga0307405_10041616
474 Ga0307405_10057967
475 Ga0307413_10004015
476 Ga0307413_10017122
477 Ga0307413_10018869
478 Ga0307413_10071623
479 Ga0307413_10075433
480 Ga0307413_10530505
481 Ga0307413_10766800
482 Ga0307410_10013033
483 Ga0307410_10032493
484 Ga0307410_10036847
485 Ga0307410_10051884
486 Ga0307410_10088901
487 Ga0307410_10152252
488 Ga0307410_10297966
489 Ga0307410_10787399
490 Ga0307410_10971099
491 Ga0307406_10019665
492 Ga0307406_10043016
493 Ga0307406_10086861
494 Ga0307406_10094419
495 Ga0307406_10101390
496 Ga0307407_10009653
497 Ga0307407_10033165
498 Ga0307412_10010865
499 Ga0307412_10085131
500 Ga0307412_10270991
501 Ga0307412_10427840
502 Ga0307412_10912033
503 Ga0307409_100016046
504 Ga0307409_100096300
505 Ga0307409_100261918
506 Ga0307409_100760071
507 Ga0307409_100856256
508 Ga0307409_100867609
509 Ga0307416_100013587
510 Ga0307416_100160564
511 Ga0307416_100163172
512 Ga0307416_100194250
513 Ga0307416_100327657
514 Ga0307416_100501083
515 Ga0307416_101704254
516 Ga0307414_10002311
517 Ga0307414_10005732
518 Ga0307414_10240710
519 Ga0307414_11015993
520 Ga0307411_10044323
521 Ga0307411_10044334
522 Ga0307411_10085444
523 Ga0307411_10637126
524 Ga0307415_100012743
525 Ga0307415_100038212
526 Ga0307415_100376299
527 Ga0373925_0046426
528 Ga0395899_0001324
529 Ga0395899_0026342
530 Ga0395899_0041561
531 Ga0395899_0072116
532 Ga0395900_0000075
533 Ga0395900_0000124
534 Ga0395900_0002472
535 Ga0395900_0114190
536 Ga0395900_0158134
537 Ga0395900_0172543
538 Ga0395900_0364902
539 Ga0395900_0591685
540 Ga0395898_0000055
541 Ga0395898_0042869
542 Ga0395898_0107525
543 Ga0395898_0230414
544 Ga0395905_0000089
545 Ga0395905_0001330
546 Ga0395905_0100615
547 Ga0395905_0182246
548 Ga0395905_0336308
549 Ga0395905_0824234
550 Ga0395905_1144963
551 Ga0395901_0000031
552 Ga0395901_0000486
553 Ga0395901_0000874
554 Ga0395901_0316367
555 Ga0395901_0407679
556 Ga0395901_0437256
557 Ga0436361_0723180
558 Ga0451793_1016062
559 Ga0451802_0522768
560 Ga0451804_0363958
561 Ga0451807_0417430
562 Ga0450912_006759
563 Ga0451577_0178046
564 Ga0466972_0029872
565 Ga0453683_0000466
566 Ga0453683_0028346
567 Ga0453683_0216180
568 Ga0466965_0053867
569 Ga0466965_0068113
570 Ga0466966_0041664
571 Ga0466961_0068490
572 Ga0466963_0027168
573 Ga0466964_0028302
574 Ga0453684_0055988
575 Ga0466971_0030750
576 Ga0466957_0052636
577 Ga0466960_0003484
578 Ga0466960_0003836
579 Ga0466959_0006592
580 Ga0466959_0328435
581 Ga0451576_0027785
582 Ga0451576_0301541
583 Ga0466958_0044542
584 Ga0466958_0154633
585 Ga0466967_0065071
586 Ga0466967_0137311
587 Ga0495607_0141176
588 Ga0495606_0000594
589 Ga0495606_0196805
590 Ga0495643_0021155
591 Ga0495621_0119609
592 Ga0495597_0010371
593 Ga0495668_0022059
594 Ga0495668_0039699
595 Ga0495625_0313303
596 Ga0495669_0004823
597 Ga0495669_0009454
598 Ga0495669_0029560
599 Ga0495669_0229510
600 Ga0495670_0167331
601 Ga0495671_0063608
602 Ga0495673_0003349
603 Ga0495686_0000063
604 Ga0495686_0000669
605 Ga0496100_0425407
606 Ga0496114_0021927
607 Ga0496117_0008232
608 Ga0496117_0056098
609 Ga0496118_0001340
610 Ga0496118_0038838
611 Ga0496118_0054088
612 Ga0496119_0027511
613 Ga0496120_0068805
614 Ga0496121_0039086
615 Ga0496122_0138369
616 Ga0496123_0001272
617 Ga0496123_0039196
618 Ga0496124_0071537
619 Ga0496124_0075857
620 Ga0496124_0173064
621 Ga0496125_0007404
622 Ga0496126_0035099
623 Ga0501036_0125170
624 Ga0501047_0158644
625 Ga0501047_0623112
626 Ga0501044_0022398
627 nmdc:mga07m45_37089_c2
628 nmdc:mga08y16_297710_c1
629 nmdc:mga0n895_80180_c1
630 Ga0500651_0000772
631 Ga0500618_005255
632 Ga0500642_0008573
633 Ga0500655_000074
634 Ga0500658_0000022
635 Ga0500559_0063366
636 Ga0500590_000030
637 Ga0500622_0011319
638 Ga0500639_125356
639 Ga0500570_000481
640 Ga0466962_0007169
641 643392638
642 2585260152
643 2753766908
644 2885427349
645 2909400379
646 2984555961
647 2993356942
648 641337190

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF10590

PNP_phzG_C

Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region

174

214

0.98

PF01243

Putative_PNPOx

Pyridoxamine 5'-phosphate oxidase

33

119

0.94

PF12766

Pyridox_oxase_2

Pyridoxamine 5'-phosphate oxidase

27

116

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
6ylz-assembly1.cif.gz_AAA-2 x-ray structure of the k72i,y129f,r133l, h199a quadruple mutant of pnp-oxidase from e. coli 0.9758 1 192
1jnw-assembly1.cif.gz_A-2 active site structure of e. coli pyridoxine 5'-phosphate oxidase 0.9728 1 192
6ylz-assembly1.cif.gz_AAA-2 x-ray structure of the k72i,y129f,r133l, h199a quadruple mutant of pnp-oxidase from e. coli 0.9708 1 192
1dnl-assembly1.cif.gz_A x-ray structure of escherichia coli pyridoxine 5'-phosphate oxidase complexed with fmn at 1.8 angstrom resolution 0.9704 1 192
1jnw-assembly1.cif.gz_A-2 active site structure of e. coli pyridoxine 5'-phosphate oxidase 0.9679 1 192
ID Description Score Start End Superfamily
1g78A00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.9727 1 192 2.30.110.10
af_Q9VHZ5_37_246_2.30.110.10 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.9657 4 192 2.30.110.10
1wv4B00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.9601 1 192 2.30.110.10
af_P9WIJ1_24_224_2.30.110.10 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.9597 3 192 2.30.110.10
6h00A00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.9551 4 192 2.30.110.10
ID Description Score Start End GO Terms
AF-A0A658NTF9-F1-model_v4 Pyridoxamine 5'-phosphate oxidase 0.9948 2 91 GO:0004733
GO:0008615
GO:0010181
AF-A0A530MPV8-F1-model_v4 deleted 0.991 2 156
AF-A4U3J7-F1-model_v4 Pyridoxine/pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5) (PNP/PMP oxidase) (PNPOx) (Pyridoxal 5'-phosphate synthase) 0.9898 14 192 GO:0004733
GO:0008615
GO:0010181
AF-A0A527H0Q6-F1-model_v4 Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5) 0.9898 28 192 GO:0004733
GO:0008615
GO:0010181
AF-A0A259J9G6-F1-model_v4 deleted 0.9896 2 95

Map