F407208

General Info

Members Datasets Scaffolds Average Seq Length
324 224 283 368

Family's Representative Sequence

Representative Sequence 3300005331|Ga0070670_100000454|Ga0070670_10000045414
Length 396
Sequence MYLRRSSNIFPVRSEPNRLHGTQHQVNEMKTVGFVGWRGMVGSVLMERMQAENDFEGIEPVFFTTSNVGGAGPVFAGGAPLKDANSIDELKKLDAIISCQGGDYTTEVFPKLRAVGWQGYWIDAASTLRMENDAIIILDPVNGDLIRDGIKRGVKNFIGGNCTNSILLMGVNGLFREGLVEWVSSMTYQAASGGGANHMRELLKGMGVIHASVADQLATPSSSIIDIDRKVAQTIREDVPHEFFDAPLAGGLIPWIDKQLDNGQSKEEWKGQAEVNKILGTEKTIPVDGLCVRIGAMRCHSLALTLKLKKDLPLAEIEALIESGNPWVKWVPNQREITAKELTPASITGGLEIGVGRVRKLNMGPEYLSAFVIGDQLLWGAAEPLRRMLRILRETV

Samples

Sample ID Description Type Environment
1 2511231003 Herbaspirillum sp. CF444 Isolate Rhizosphere
2 2511231026 Herbaspirillum sp. YR522 Isolate Rhizosphere
3 2521172590 Herbaspirillum sp. GW103 Isolate Rhizosphere
4 2548876994 Herbaspirillum lusitanum P6-12 Isolate Nodule
5 2551306416 Herbaspirillum seropedicae Os34 Isolate Unclassified
6 2596583598 Ralstonia sp. UNCCL144 Isolate Unclassified
7 2599185178 Ralstonia sp. NFACC01 Isolate Rhizoplane
8 2648501241 Vibrio splendidus UCD-SED7 Isolate Rhizosphere
9 2651869818 Vibrio splendidus UCD-SED10 Isolate Rhizosphere
10 2721755523 Delftia sp. HK171 Isolate Unclassified
11 2738541276 Cellvibrio sp. YR554 Isolate Unclassified
12 2765235838 Herbaspirillum robiniae AA6 Isolate Unclassified
13 2808606386 Herbaspirillum sp. SJZ099 Isolate Rhizosphere
14 2808606415 Herbaspirillum sp. SJZ130 Isolate Rhizosphere
15 2808606419 Herbaspirillum sp. SJZ106 Isolate Rhizosphere
16 2818991445 Herbaspirillum hiltneri 3195 Isolate Unclassified
17 2818991449 Herbaspirillum huttiense 1147 Isolate Unclassified
18 2839094727 Herbaspirillum robiniae HZ10 Isolate Nodule
19 2839138175 Delftia acidovorans B15 Isolate Rhizosphere
20 2846033681 Chromobacterium sinusclupearum MWU13-2610 Isolate Rhizosphere
21 2846037992 Chromobacterium alticapitis MWU14-2602 Isolate Rhizosphere
22 2852618963 Herbaspirillum sp. SJZ102 Isolate Rhizosphere
23 2884811622 Herbaspirillum sp. 3C11 Isolate Unclassified
24 2884836552 Herbaspirillum sp. 3R-11 Isolate Unclassified
25 2884852848 Herbaspirillum sp. 3R11 Isolate Unclassified
26 2896154374 Herbaspirillum sp. 3R-3a1 Isolate Nodule
27 2900577576 Ralstonia sp. TCR112 Isolate Rhizosphere
28 2904439833 Herbaspirillum sp. 1589 Isolate Rhizosphere
29 2904479285 Comamonas sediminis 4487 Isolate Rhizosphere
30 2904530477 Herbaspirillum huttiense 611 Isolate Unclassified
31 2904584206 Herbaspirillum sp. 1050 Isolate Unclassified
32 2904589729 Herbaspirillum sp. 1130 Isolate Unclassified
33 2904601388 Herbaspirillum sp. 1273 Isolate Rhizosphere
34 2919046199 Herbaspirillum frisingense 596 Isolate Unclassified
35 2919079590 Herbaspirillum sp. 1173 Isolate Unclassified
36 2923510766 Herbaspirillum rubrisubalbicans SLBN-127 Isolate Rhizosphere
37 2928058823 Ralstonia sp. 1138 Isolate Unclassified
38 2928130867 Herbaspirillum seropedicae 1977 Isolate Unclassified
39 2932422444 Comamonas sp. 4034 Isolate Rhizosphere
40 2998344455 Vogesella urethralis SLBN-145 Isolate Rhizosphere
41 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
42 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
43 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
44 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
45 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
46 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
47 3300003565 Arabidopsis rhizosphere microbial communities from the University of North Carolina, USA - metaT NBMF1_16_lowP_mix3_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
48 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
49 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
50 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
51 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
52 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
53 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
54 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
55 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
56 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
57 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
58 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
59 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
60 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
61 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
62 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
63 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
64 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
65 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
66 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
67 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
68 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
69 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
70 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
71 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
72 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
73 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
74 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
75 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
76 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
77 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
78 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
79 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
80 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
81 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
82 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
83 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
84 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
85 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
86 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
87 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
88 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
89 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
90 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
91 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
92 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
93 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
94 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
95 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
96 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
97 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
98 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
99 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
100 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
101 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
102 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
103 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
104 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
105 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
106 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
107 3300020076 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) Metatranscriptome Rhizosphere
108 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
109 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
110 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
111 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
112 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
113 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
114 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
115 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
116 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
117 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
118 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
119 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
120 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
121 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
122 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
123 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
124 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
125 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
126 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
127 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
128 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
138 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
139 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
140 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
141 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
142 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
143 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
144 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
145 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
146 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
147 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
148 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
149 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
150 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
151 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
152 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
153 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
154 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
155 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
156 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
157 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
158 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
159 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
160 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
161 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
162 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
163 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
164 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
165 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
166 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
167 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
168 3300033527 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
169 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
170 3300033529 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
171 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
172 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
173 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
174 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
175 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
176 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
177 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
178 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
179 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
180 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
181 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
182 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
183 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
184 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
185 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
186 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
187 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
188 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
189 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
190 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
191 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
192 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
193 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
194 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
195 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
196 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
197 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
198 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
199 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
200 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
201 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
202 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
203 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
204 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
205 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
206 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
207 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
208 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
209 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
210 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
211 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
212 3300049656 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought Metagenome Rhizosphere
213 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
214 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
215 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
216 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
217 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
218 3300059477 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 50R_CW_T2_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
219 3300059504 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 23R_SD_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
220 3300059508 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 53R_CD_T2_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
221 3300059511 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 56R_CD_T2_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
222 3300059640 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 8R_CD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
223 3300059643 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 13R_AD_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
224 3300059645 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 18R_SW_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 75
Metatranscriptomes 12.35
Isolates 12.65

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.96
Nodule 1.54
Rhizoplane 0.31
Rhizosphere 72.53
Stem 0
Stem Tuber 0
Unclassified 12.65

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1000278 3300001915 Bacteria 15395
2 JGI24740J21852_10006377 3300001979 Bacteria 4890
3 JGI25156J39149_1003878 3300002705 Bacteria 4747
4 JGI25154J39366_1000130 3300002738 Bacteria 59127
5 JGI25157J39369_1000206 3300002741 Bacteria 49227
6 rootH1_10026054 3300003323 Bacteria 30471
7 Ga0006560J51390_1021601 3300003565 Bacteria 1774
8 Ga0006562J51391_1024019 3300003578 Bacteria 6660
9 Ga0055538_1000054 3300003751 Bacteria 123566
10 Ga0055539_1000066 3300003752 Bacteria 136557
11 Ga0055539_1000095 3300003752 Bacteria 102639
12 Ga0055533_1000076 3300003756 Bacteria 136557
13 Ga0055533_1001900 3300003756 Bacteria 5186
14 Ga0055532_1000058 3300003758 Bacteria 153303
15 Ga0055532_1000097 3300003758 Bacteria 98781
16 Ga0055525_1000098 3300003759 Bacteria 136557
17 Ga0055525_1000334 3300003759 Bacteria 35136
18 Ga0055527_1001152 3300003760 Bacteria 6010
19 Ga0055535_1000041 3300003761 Bacteria 153303
20 Ga0055542_1000834 3300003762 Bacteria 21913
21 Ga0055542_1001575 3300003762 Bacteria 10628
22 Ga0055529_1000077 3300003763 Bacteria 153303
23 Ga0055541_1000056 3300003841 Bacteria 123566
24 Ga0065704_10087020 3300005289 Bacteria 3059
25 Ga0070670_100000454 3300005331 Bacteria 33113
26 Ga0070670_100148030 3300005331 Bacteria 2032
27 Ga0070666_10090840 3300005335 Bacteria 2097
28 Ga0070661_100000085 3300005344 Bacteria 74949
29 Ga0070669_100003624 3300005353 Bacteria 11139
30 Ga0070671_100000026 3300005355 Bacteria 120482
31 Ga0070688_100000735 3300005365 Bacteria 16173
32 Ga0070659_100009969 3300005366 Bacteria 6990
33 Ga0070667_100000676 3300005367 Bacteria 33113
34 Ga0070663_100000028 3300005455 Bacteria 82427
35 Ga0070681_10147399 3300005458 Bacteria 2282
36 Ga0070685_10000044 3300005466 Bacteria 74685
37 Ga0070665_100025335 3300005548 Bacteria 5977
38 Ga0068855_100014819 3300005563 Bacteria 9388
39 Ga0068855_100016531 3300005563 Bacteria 8875
40 Ga0068855_100300998 3300005563 Bacteria 1776
41 Ga0070664_100000020 3300005564 Bacteria 119858
42 Ga0068857_100008701 3300005577 Bacteria 8785
43 Ga0068854_100000192 3300005578 Bacteria 40988
44 Ga0068856_100000802 3300005614 Bacteria 33916
45 Ga0068856_100031035 3300005614 Bacteria 5227
46 Ga0068852_100079340 3300005616 Bacteria 2908
47 Ga0068859_100012930 3300005617 Bacteria 8385
48 Ga0068864_100000520 3300005618 Bacteria 33113
49 Ga0068858_100041250 3300005842 Bacteria 4280
50 Ga0068858_100056123 3300005842 Bacteria 3641
51 Ga0068860_100000910 3300005843 Bacteria 32798
52 Ga0068862_100002045 3300005844 Bacteria 18241
53 Ga0068862_100366197 3300005844 Bacteria 1341
54 Ga0097620_100012929 3300006931 Bacteria 8385
55 Ga0079104_1000002 3300006946 Bacteria 514469
56 Ga0099794_10012894 3300007265 Bacteria 3623
57 Ga0099794_10105896 3300007265 Bacteria 1406
58 Ga0099795_10010157 3300007788 Bacteria 2760
59 Ga0105250_10001110 3300009092 Bacteria 15175
60 Ga0105240_10019329 3300009093 Bacteria 9104
61 Ga0105240_10024497 3300009093 Bacteria 7952
62 Ga0105247_10019482 3300009101 Bacteria 4073
63 Ga0105243_10002783 3300009148 Bacteria 14526
64 Ga0105241_10203329 3300009174 Bacteria 1656
65 Ga0105248_10179439 3300009177 Bacteria 2386
66 Ga0105248_10270804 3300009177 Bacteria 1912
67 Ga0105237_10034390 3300009545 Bacteria 5132
68 Ga0105238_10001204 3300009551 Bacteria 26075
69 Ga0105238_10026269 3300009551 Bacteria 5934
70 Ga0105239_10009281 3300010375 Bacteria 11121
71 Ga0157373_10007796 3300013100 Bacteria 7960
72 Ga0157371_10000082 3300013102 Bacteria 149981
73 Ga0157370_10000089 3300013104 Bacteria 103347
74 Ga0157369_10031076 3300013105 Bacteria 5885
75 Ga0163162_10064098 3300013306 Bacteria 3720
76 Ga0157372_10000122 3300013307 Bacteria 83503
77 Ga0163163_10000342 3300014325 Bacteria 45042
78 Ga0182008_10008592 3300014497 Bacteria 5564
79 Ga0182006_1003804 3300015261 Bacteria 7586
80 Ga0206356_11765033 3300020070 Bacteria 1406
81 Ga0206349_1142056 3300020075 Bacteria 2698
82 Ga0206355_1417348 3300020076 Bacteria 2928
83 Ga0206351_10877176 3300020077 Bacteria 8157
84 Ga0206350_11470775 3300020080 Bacteria 2821
85 Ga0154015_1191932 3300020610 Bacteria 8941
86 Ga0213872_10002904 3300021361 Bacteria 9745
87 Ga0213872_10019315 3300021361 Bacteria 3139
88 Ga0224712_10083290 3300022467 Bacteria 1325
89 Ga0209435_100040 3300025206 Bacteria 115475
90 Ga0209435_100387 3300025206 Bacteria 9648
91 Ga0209784_100002 3300025224 Bacteria 1753105
92 Ga0209784_100055 3300025224 Bacteria 177507
93 Ga0209784_100258 3300025224 Bacteria 33060
94 Ga0209566_100002 3300025225 Bacteria 2614868
95 Ga0209566_100003 3300025225 Bacteria 1753105
96 Ga0209566_100966 3300025225 Bacteria 12728
97 Ga0209566_100984 3300025225 Bacteria 12542
98 Ga0209674_100004 3300025226 Bacteria 1753105
99 Ga0209674_100090 3300025226 Bacteria 175563
100 Ga0209674_100264 3300025226 Bacteria 41417
101 Ga0209672_100122 3300025228 Bacteria 81984
102 Ga0209147_100002 3300025229 Bacteria 2158988
103 Ga0209147_100141 3300025229 Bacteria 115466
104 Ga0209563_100006 3300025230 Bacteria 1753105
105 Ga0209563_100095 3300025230 Bacteria 165592
106 Ga0209563_102263 3300025230 Bacteria 4447
107 Ga0209437_100229 3300025233 Bacteria 95900
108 Ga0209258_100002 3300025242 Bacteria 2158988
109 Ga0209258_100346 3300025242 Bacteria 66811
110 Ga0209646_1000019 3300025246 Bacteria 475248
111 Ga0209646_1000218 3300025246 Bacteria 62078
112 Ga0209026_1000534 3300025250 Bacteria 26239
113 Ga0209026_1003442 3300025250 Bacteria 5176
114 Ga0209677_100003 3300025253 Bacteria 1753105
115 Ga0209677_100208 3300025253 Bacteria 45576
116 Ga0209148_1000118 3300025254 Bacteria 188330
117 Ga0209148_1002036 3300025254 Bacteria 7847
118 Ga0209759_1002058 3300025256 Bacteria 9431
119 Ga0209759_1008936 3300025256 Bacteria 3080
120 Ga0209455_1000009 3300025272 Bacteria 1042273
121 Ga0207710_10003154 3300025900 Bacteria 7383
122 Ga0207680_10053163 3300025903 Bacteria 2430
123 Ga0207695_10001497 3300025913 Bacteria 38881
124 Ga0207695_10015511 3300025913 Bacteria 8966
125 Ga0207695_10023563 3300025913 Bacteria 6950
126 Ga0207649_10000290 3300025920 Bacteria 39130
127 Ga0207681_10002737 3300025923 Bacteria 11161
128 Ga0207694_10000532 3300025924 Bacteria 34516
129 Ga0207650_10000081 3300025925 Bacteria 129104
130 Ga0207644_10000065 3300025931 Bacteria 76549
131 Ga0207690_10005613 3300025932 Bacteria 7415
132 Ga0207709_10000015 3300025935 Bacteria 493221
133 Ga0207704_10062796 3300025938 Bacteria 2312
134 Ga0207711_10000326 3300025941 Bacteria 50831
135 Ga0207711_10001744 3300025941 Bacteria 19945
136 Ga0207679_10000028 3300025945 Bacteria 187787
137 Ga0207667_10000334 3300025949 Bacteria 64711
138 Ga0207640_10000078 3300025981 Bacteria 75735
139 Ga0207658_10000051 3300025986 Bacteria 129104
140 Ga0207703_10036956 3300026035 Bacteria 3889
141 Ga0207703_10241835 3300026035 Bacteria 1623
142 Ga0207678_10000787 3300026067 Bacteria 29012
143 Ga0207702_10000149 3300026078 Bacteria 81592
144 Ga0207702_10038626 3300026078 Bacteria 3998
145 Ga0207641_10007124 3300026088 Bacteria 9340
146 Ga0207641_10014345 3300026088 Bacteria 6494
147 Ga0207676_10000053 3300026095 Bacteria 129104
148 Ga0207674_10009496 3300026116 Bacteria 11107
149 Ga0209281_1000007 3300027111 Bacteria 938265
150 Ga0209588_1006411 3300027671 Bacteria 3419
151 Ga0268266_10005337 3300028379 Bacteria 12025
152 Ga0268266_10268479 3300028379 Bacteria 1583
153 Ga0268265_10000390 3300028380 Bacteria 46763
154 Ga0268265_10328880 3300028380 Bacteria 1387
155 Ga0268264_10000306 3300028381 Bacteria 78744
156 Ga0265326_10006378 3300028558 Bacteria 3673
157 Ga0265327_10000200 3300031251 Bacteria 125094
158 Ga0307408_100000411 3300031548 Bacteria 38447
159 Ga0316575_10001671 3300031665 Bacteria 7255
160 Ga0316579_10000074 3300031691 Bacteria 25074
161 Ga0316579_10001869 3300031691 Bacteria 7807
162 Ga0316579_10003584 3300031691 Bacteria 6088
163 Ga0316579_10040317 3300031691 Bacteria 2165
164 Ga0316579_10059030 3300031691 Bacteria 1803
165 Ga0316576_10000087 3300031727 Bacteria 32443
166 Ga0316576_10011865 3300031727 Bacteria 5732
167 Ga0316576_10016142 3300031727 Bacteria 5035
168 Ga0316576_10025135 3300031727 Bacteria 4166
169 Ga0316576_10039469 3300031727 Bacteria 3389
170 Ga0316576_10104542 3300031727 Bacteria 2119
171 Ga0316576_10111286 3300031727 Bacteria 2052
172 Ga0316576_10177171 3300031727 Bacteria 1608
173 Ga0316578_10005148 3300031728 Bacteria 6299
174 Ga0316578_10014985 3300031728 Bacteria 4157
175 Ga0316578_10032085 3300031728 Bacteria 2997
176 Ga0316578_10039250 3300031728 Bacteria 2734
177 Ga0316577_10005347 3300031733 Bacteria 6727
178 Ga0316577_10006097 3300031733 Bacteria 6356
179 Ga0316577_10009713 3300031733 Bacteria 5179
180 Ga0316577_10036111 3300031733 Bacteria 2763
181 Ga0316583_10006097 3300032133 Bacteria 4336
182 Ga0316585_10002613 3300032137 Bacteria 4877
183 Ga0316585_10003921 3300032137 Bacteria 4117
184 Ga0316580_10000107 3300032139 Bacteria 15287
185 Ga0316580_10029455 3300032139 Bacteria 1698
186 Ga0316593_10001211 3300032168 Bacteria 5546
187 Ga0316593_10001350 3300032168 Bacteria 5358
188 Ga0316593_10002714 3300032168 Bacteria 4263
189 Ga0316593_10003443 3300032168 Bacteria 3926
190 Ga0316593_10007946 3300032168 Bacteria 2937
191 Ga0316593_10026960 3300032168 Bacteria 1840
192 Ga0316593_10038872 3300032168 Bacteria 1577
193 Ga0316592_1000034 3300033524 Bacteria 10807
194 Ga0316592_1008121 3300033524 Bacteria 2064
195 Ga0316592_1012926 3300033524 Bacteria 1716
196 Ga0316592_1012950 3300033524 Bacteria 1714
197 Ga0316586_1000087 3300033527 Bacteria 6641
198 Ga0316586_1006605 3300033527 Bacteria 1668
199 Ga0316588_1000842 3300033528 Bacteria 4629
200 Ga0316588_1010270 3300033528 Bacteria 1969
201 Ga0316588_1028700 3300033528 Bacteria 1298
202 Ga0316587_1000274 3300033529 Bacteria 4713
203 Ga0316596_1001239 3300033541 Bacteria 5046
204 Ga0316596_1001404 3300033541 Bacteria 4841
205 Ga0316596_1001575 3300033541 Bacteria 4656
206 Ga0316596_1003897 3300033541 Bacteria 3306
207 Ga0316596_1004314 3300033541 Bacteria 3182
208 Ga0316596_1008759 3300033541 Bacteria 2418
209 Ga0316596_1022963 3300033541 Bacteria 1596
210 Ga0373934_0001624 3300035086 Bacteria 8246
211 Ga0373954_0000812 3300035118 Bacteria 12090
212 Ga0373956_0000035 3300035119 Bacteria 43792
213 Ga0373957_0000803 3300035120 Bacteria 8165
214 Ga0373955_0027518 3300035172 Bacteria 2940
215 Ga0316574_0007008 3300035398 Bacteria 6142
216 Ga0316574_0018745 3300035398 Bacteria 4072
217 Ga0316574_0056359 3300035398 Bacteria 2458
218 Ga0316574_0101512 3300035398 Bacteria 1841
219 Ga0316574_0166870 3300035398 Bacteria 1418
220 Ga0373933_0009224 3300035724 Bacteria 5387
221 Ga0373937_0000233 3300036401 Bacteria 54240
222 Ga0316582_0008519 3300036647 Bacteria 5519
223 Ga0316582_0012961 3300036647 Bacteria 4675
224 Ga0316582_0016932 3300036647 Bacteria 4204
225 Ga0316582_0021751 3300036647 Bacteria 3796
226 Ga0316582_0067444 3300036647 Bacteria 2308
227 Ga0316582_0121934 3300036647 Bacteria 1745
228 Ga0316582_0126646 3300036647 Bacteria 1713
229 Ga0316584_0000524 3300036712 Bacteria 20424
230 Ga0316584_0002549 3300036712 Bacteria 11564
231 Ga0316584_0014549 3300036712 Bacteria 5604
232 Ga0316584_0023060 3300036712 Bacteria 4545
233 Ga0316584_0051350 3300036712 Bacteria 3083
234 Ga0316584_0089445 3300036712 Bacteria 2305
235 Ga0395899_0039549 3300037312 Bacteria 3530
236 Ga0395900_0017957 3300037418 Bacteria 7221
237 Ga0395905_0051782 3300037471 Bacteria 3845
238 Ga0395901_0002361 3300038443 Bacteria 19197
239 Ga0400490_12170 3300038726 Bacteria 70825
240 Ga0400490_52669 3300038726 Bacteria 57174
241 Ga0400491_03802 3300038727 Bacteria 9394
242 Ga0400485_08697 3300038735 Bacteria 4483
243 Ga0400483_035326 3300039062 Bacteria 2128
244 Ga0436361_0089627 3300039447 Bacteria 7998
245 Ga0436361_0768698 3300039447 Bacteria 1904
246 Ga0466972_0011576 3300044658 Bacteria 4429
247 Ga0453683_0052102 3300044673 Bacteria 2563
248 Ga0466961_0011909 3300044693 Bacteria 5559
249 Ga0466964_0042709 3300044706 Bacteria 1837
250 Ga0453684_0783178 3300044712 Bacteria 1030
251 Ga0466960_0024428 3300044901 Bacteria 2726
252 Ga0466959_0037417 3300045049 Bacteria 3585
253 Ga0451576_0000386 3300045051 Bacteria 102813
254 Ga0451576_0138371 3300045051 Bacteria 2540
255 Ga0466967_0085810 3300045976 Bacteria 2851
256 Ga0495592_0066541 3300046454 Bacteria 2636
257 Ga0495651_0000178 3300046462 Bacteria 47161
258 Ga0495628_0001910 3300046516 Bacteria 18904
259 Ga0495652_0005856 3300046529 Bacteria 11508
260 Ga0495597_0000110 3300046542 Bacteria 72678
261 Ga0495645_0004911 3300046543 Bacteria 9148
262 Ga0495657_0017971 3300046675 Bacteria 5127
263 Ga0495599_0000384 3300046678 Bacteria 25474
264 Ga0496124_0016702 3300048927 Bacteria 6963
265 Ga0496125_0001421 3300048928 Bacteria 34916
266 Ga0496125_0003647 3300048928 Bacteria 18422
267 Ga0496125_0016372 3300048928 Bacteria 7125
268 Ga0496125_0118349 3300048928 Bacteria 1897
269 Ga0496126_0029167 3300048929 Bacteria 5244
270 Ga0501031_0225024 3300049568 Bacteria 1221
271 Ga0501209_000386 3300049656 Bacteria 5385
272 Ga0501035_0050402 3300049822 Bacteria 3731
273 Ga0495601_0028753 3300053077 Bacteria 3445
274 Ga0500650_0000031 3300053098 Bacteria 54318
275 Ga0500595_012408 3300053119 Bacteria 3298
276 Ga0500618_002326 3300053125 Bacteria 7290
277 Ga0587084_000481 3300059477 Bacteria 3174
278 Ga0587082_002643 3300059504 Bacteria 2054
279 Ga0587088_003197 3300059508 Bacteria 1958
280 Ga0587091_001233 3300059511 Bacteria 2693
281 Ga0587067_000140 3300059640 Bacteria 4939
282 Ga0587072_000278 3300059643 Bacteria 4764
283 Ga0587076_000199 3300059645 Bacteria 4168

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300038735 Ga0400485_08697 Ga0400485_08697_33_986 314
2 3300044712 Ga0453684_0783178 Ga0453684_0783178_36_1001 317
3 3300036712 Ga0316584_0089445 Ga0316584_0089445_1319_2293 322
4 3300049568 Ga0501031_0225024 Ga0501031_0225024_39_1007 322
5 3300035172 Ga0373955_0027518 Ga0373955_0027518_1905_2903 326
6 3300036712 Ga0316584_0002549 Ga0316584_0002549_4926_6011 349
7 iso_pu_bacteria 2852618963 2852621059 353
8 iso_pu_bacteria 2923510766 2923512914 353
9 3300045051 Ga0451576_0000386 Ga0451576_0000386_23747_24823 356
10 3300005563 Ga0068855_100016531 Ga0068855_1000165312 357
11 3300007265 Ga0099794_10012894 Ga0099794_100128942 357
12 3300009174 Ga0105241_10203329 Ga0105241_102033293 357
13 3300013100 Ga0157373_10007796 Ga0157373_100077966 357
14 3300013102 Ga0157371_10000082 Ga0157371_10000082109 357
15 3300013104 Ga0157370_10000089 Ga0157370_1000008988 357
16 3300013307 Ga0157372_10000122 Ga0157372_1000012244 357
17 3300026078 Ga0207702_10038626 Ga0207702_100386262 357
18 3300031691 Ga0316579_10001869 Ga0316579_100018692 357
19 3300031691 Ga0316579_10040317 Ga0316579_100403172 357
20 3300031727 Ga0316576_10016142 Ga0316576_100161422 357
21 3300031728 Ga0316578_10005148 Ga0316578_100051484 357
22 3300031728 Ga0316578_10014985 Ga0316578_100149853 357
23 3300032139 Ga0316580_10029455 Ga0316580_100294552 357
24 3300032168 Ga0316593_10026960 Ga0316593_100269602 357
25 3300033524 Ga0316592_1008121 Ga0316592_10081212 357
26 3300033527 Ga0316586_1006605 Ga0316586_10066052 357
27 3300033528 Ga0316588_1010270 Ga0316588_10102702 357
28 3300033541 Ga0316596_1001575 Ga0316596_10015751 357
29 3300033541 Ga0316596_1004314 Ga0316596_10043142 357
30 3300033541 Ga0316596_1008759 Ga0316596_10087592 357
31 3300033541 Ga0316596_1022963 Ga0316596_10229632 357
32 3300035086 Ga0373934_0001624 Ga0373934_0001624_1125_2216 357
33 3300035118 Ga0373954_0000812 Ga0373954_0000812_7430_8521 357
34 3300035119 Ga0373956_0000035 Ga0373956_0000035_6233_7324 357
35 3300035120 Ga0373957_0000803 Ga0373957_0000803_5289_6380 357
36 3300035398 Ga0316574_0018745 Ga0316574_0018745_567_1661 357
37 3300035398 Ga0316574_0166870 Ga0316574_0166870_308_1390 357
38 3300035724 Ga0373933_0009224 Ga0373933_0009224_1171_2262 357
39 3300036401 Ga0373937_0000233 Ga0373937_0000233_16669_17760 357
40 3300036647 Ga0316582_0016932 Ga0316582_0016932_1798_2892 357
41 3300036647 Ga0316582_0067444 Ga0316582_0067444_663_1757 357
42 3300036647 Ga0316582_0126646 Ga0316582_0126646_123_1205 357
43 3300036712 Ga0316584_0014549 Ga0316584_0014549_3628_4722 357
44 3300036712 Ga0316584_0023060 Ga0316584_0023060_3208_4302 357
45 3300038443 Ga0395901_0002361 Ga0395901_0002361_6493_7566 357
46 3300039062 Ga0400483_035326 Ga0400483_035326_117_1193 357
47 3300039447 Ga0436361_0089627 Ga0436361_0089627_1963_3042 357
48 3300039447 Ga0436361_0768698 Ga0436361_0768698_723_1799 357
49 3300044673 Ga0453683_0052102 Ga0453683_0052102_1215_2300 357
50 3300044901 Ga0466960_0024428 Ga0466960_0024428_1142_2227 357
51 3300045051 Ga0451576_0138371 Ga0451576_0138371_995_2080 357
52 3300046462 Ga0495651_0000178 Ga0495651_0000178_35224_36315 357
53 3300046542 Ga0495597_0000110 Ga0495597_0000110_69305_70378 357
54 3300046675 Ga0495657_0017971 Ga0495657_0017971_1072_2163 357
55 3300048928 Ga0496125_0016372 Ga0496125_0016372_3910_4983 357
56 3300031727 Ga0316576_10039469 Ga0316576_100394691 359
57 3300033524 Ga0316592_1012950 Ga0316592_10129502 359
58 3300033541 Ga0316596_1001404 Ga0316596_10014041 359
59 iso_pu_bacteria 2596583598 2597032740 363
60 iso_pu_bacteria 2599185178 2599443949 363
61 iso_pu_bacteria 2648501241 2649120920 363
62 iso_pu_bacteria 2651869818 2652975443 363
63 iso_pu_bacteria 2738541276 2738715594 363
64 iso_pu_bacteria 2846033681 2846037963 363
65 iso_pu_bacteria 2846037992 2846040330 363
66 iso_pu_bacteria 2900577576 2900578347 363
67 iso_pu_bacteria 2900577576 2900578760 363
68 iso_pu_bacteria 2928058823 2928062230 363
69 iso_pu_bacteria 2998344455 2998346674 363
70 iso_pu_bacteria 2511231003 2511252106 364
71 iso_pu_bacteria 2521172590 2521559234 364
72 iso_pu_bacteria 2548876994 2550693822 364
73 iso_pu_bacteria 2818991445 2819595099 364
74 iso_pu_bacteria 2839094727 2839096522 364
75 iso_pu_bacteria 2884811622 2884815776 364
76 iso_pu_bacteria 2884836552 2884836802 364
77 iso_pu_bacteria 2884852848 2884853093 364
78 iso_pu_bacteria 2896154374 2896155789 364
79 iso_pu_bacteria 2904439833 2904443601 364
80 iso_pu_bacteria 2904601388 2904605539 364
81 iso_pu_bacteria 2919079590 2919081312 364
82 iso_pu_bacteria 2928130867 2928133761 364
83 iso_pu_bacteria 2511231026 2511383729 365
84 iso_pu_bacteria 2551306416 2553004043 365
85 iso_pu_bacteria 2721755523 2722882252 365
86 iso_pu_bacteria 2765235838 2765568597 365
87 iso_pu_bacteria 2808606386 2808981319 365
88 iso_pu_bacteria 2808606415 2809128905 365
89 iso_pu_bacteria 2808606419 2809148526 365
90 iso_pu_bacteria 2818991449 2819615740 365
91 iso_pu_bacteria 2839138175 2839140005 365
92 iso_pu_bacteria 2904530477 2904532527 365
93 iso_pu_bacteria 2904584206 2904584996 365
94 iso_pu_bacteria 2904589729 2904593345 365
95 iso_pu_bacteria 2919046199 2919048161 365
96 iso_pu_bacteria 2932422444 2932423732 365
97 3300005331 Ga0070670_100000454 Ga0070670_10000045414 366
98 3300005335 Ga0070666_10090840 Ga0070666_100908401 366
99 3300005353 Ga0070669_100003624 Ga0070669_1000036247 366
100 3300005355 Ga0070671_100000026 Ga0070671_10000002659 366
101 3300005365 Ga0070688_100000735 Ga0070688_10000073512 366
102 3300005367 Ga0070667_100000676 Ga0070667_10000067614 366
103 3300005466 Ga0070685_10000044 Ga0070685_1000004453 366
104 3300005548 Ga0070665_100025335 Ga0070665_1000253356 366
105 3300005617 Ga0068859_100012930 Ga0068859_1000129303 366
106 3300005618 Ga0068864_100000520 Ga0068864_10000052014 366
107 3300005842 Ga0068858_100041250 Ga0068858_1000412503 366
108 3300005842 Ga0068858_100056123 Ga0068858_1000561234 366
109 3300005843 Ga0068860_100000910 Ga0068860_10000091021 366
110 3300005844 Ga0068862_100002045 Ga0068862_1000020455 366
111 3300005844 Ga0068862_100366197 Ga0068862_1003661972 366
112 3300006931 Ga0097620_100012929 Ga0097620_1000129293 366
113 3300009101 Ga0105247_10019482 Ga0105247_100194824 366
114 3300009177 Ga0105248_10179439 Ga0105248_101794392 366
115 3300009177 Ga0105248_10270804 Ga0105248_102708042 366
116 3300013306 Ga0163162_10064098 Ga0163162_100640982 366
117 3300014325 Ga0163163_10000342 Ga0163163_1000034213 366
118 3300025900 Ga0207710_10003154 Ga0207710_100031543 366
119 3300025903 Ga0207680_10053163 Ga0207680_100531632 366
120 3300025923 Ga0207681_10002737 Ga0207681_100027373 366
121 3300025925 Ga0207650_10000081 Ga0207650_1000008119 366
122 3300025931 Ga0207644_10000065 Ga0207644_1000006512 366
123 3300025941 Ga0207711_10000326 Ga0207711_1000032648 366
124 3300025941 Ga0207711_10001744 Ga0207711_1000174417 366
125 3300025986 Ga0207658_10000051 Ga0207658_1000005119 366
126 3300026035 Ga0207703_10036956 Ga0207703_100369563 366
127 3300026035 Ga0207703_10241835 Ga0207703_102418352 366
128 3300026088 Ga0207641_10007124 Ga0207641_100071248 366
129 3300026088 Ga0207641_10014345 Ga0207641_100143452 366
130 3300026095 Ga0207676_10000053 Ga0207676_1000005319 366
131 3300028379 Ga0268266_10005337 Ga0268266_100053374 366
132 3300028379 Ga0268266_10268479 Ga0268266_102684792 366
133 3300028380 Ga0268265_10000390 Ga0268265_1000039038 366
134 3300028380 Ga0268265_10328880 Ga0268265_103288802 366
135 3300028381 Ga0268264_10000306 Ga0268264_1000030657 366
136 3300048928 Ga0496125_0118349 Ga0496125_0118349_772_1878 366
137 3300048929 Ga0496126_0029167 Ga0496126_0029167_2297_3400 366
138 3300049656 Ga0501209_000386 Ga0501209_000386_1460_2563 366
139 3300049822 Ga0501035_0050402 Ga0501035_0050402_2605_3720 366
140 3300053098 Ga0500650_0000031 Ga0500650_0000031_5008_6114 366
141 3300001915 JGI24741J21665_1000278 JGI24741J21665_100027815 367
142 3300001979 JGI24740J21852_10006377 JGI24740J21852_100063775 367
143 3300002705 JGI25156J39149_1003878 JGI25156J39149_10038783 367
144 3300002738 JGI25154J39366_1000130 JGI25154J39366_100013061 367
145 3300002741 JGI25157J39369_1000206 JGI25157J39369_100020621 367
146 3300003323 rootH1_10026054 rootH1_1002605424 367
147 3300003565 Ga0006560J51390_1021601 Ga0006560J51390_10216013 367
148 3300003578 Ga0006562J51391_1024019 Ga0006562J51391_10240194 367
149 3300003751 Ga0055538_1000054 Ga0055538_100005441 367
150 3300003752 Ga0055539_1000066 Ga0055539_100006641 367
151 3300003752 Ga0055539_1000095 Ga0055539_100009572 367
152 3300003756 Ga0055533_1000076 Ga0055533_100007641 367
153 3300003756 Ga0055533_1001900 Ga0055533_10019005 367
154 3300003758 Ga0055532_1000058 Ga0055532_1000058123 367
155 3300003758 Ga0055532_1000097 Ga0055532_100009736 367
156 3300003759 Ga0055525_1000098 Ga0055525_100009841 367
157 3300003759 Ga0055525_1000334 Ga0055525_100033429 367
158 3300003760 Ga0055527_1001152 Ga0055527_10011523 367
159 3300003761 Ga0055535_1000041 Ga0055535_1000041123 367
160 3300003762 Ga0055542_1000834 Ga0055542_10008342 367
161 3300003762 Ga0055542_1001575 Ga0055542_100157511 367
162 3300003763 Ga0055529_1000077 Ga0055529_100007738 367
163 3300003841 Ga0055541_1000056 Ga0055541_100005641 367
164 3300005289 Ga0065704_10087020 Ga0065704_100870203 367
165 3300005331 Ga0070670_100148030 Ga0070670_1001480302 367
166 3300005344 Ga0070661_100000085 Ga0070661_10000008559 367
167 3300005366 Ga0070659_100009969 Ga0070659_1000099692 367
168 3300005455 Ga0070663_100000028 Ga0070663_10000002883 367
169 3300005458 Ga0070681_10147399 Ga0070681_101473991 367
170 3300005563 Ga0068855_100014819 Ga0068855_1000148195 367
171 3300005563 Ga0068855_100300998 Ga0068855_1003009981 367
172 3300005564 Ga0070664_100000020 Ga0070664_10000002017 367
173 3300005577 Ga0068857_100008701 Ga0068857_1000087012 367
174 3300005578 Ga0068854_100000192 Ga0068854_10000019223 367
175 3300005614 Ga0068856_100000802 Ga0068856_10000080214 367
176 3300005614 Ga0068856_100031035 Ga0068856_1000310352 367
177 3300005616 Ga0068852_100079340 Ga0068852_1000793402 367
178 3300006946 Ga0079104_1000002 Ga0079104_1000002302 367
179 3300007265 Ga0099794_10105896 Ga0099794_101058961 367
180 3300007788 Ga0099795_10010157 Ga0099795_100101572 367
181 3300009092 Ga0105250_10001110 Ga0105250_1000111016 367
182 3300009093 Ga0105240_10019329 Ga0105240_100193296 367
183 3300009093 Ga0105240_10024497 Ga0105240_100244974 367
184 3300009148 Ga0105243_10002783 Ga0105243_1000278312 367
185 3300009545 Ga0105237_10034390 Ga0105237_100343902 367
186 3300009551 Ga0105238_10001204 Ga0105238_100012045 367
187 3300009551 Ga0105238_10026269 Ga0105238_100262695 367
188 3300010375 Ga0105239_10009281 Ga0105239_100092816 367
189 3300013105 Ga0157369_10031076 Ga0157369_100310763 367
190 3300014497 Ga0182008_10008592 Ga0182008_100085923 367
191 3300015261 Ga0182006_1003804 Ga0182006_10038041 367
192 3300020070 Ga0206356_11765033 Ga0206356_117650332 367
193 3300020075 Ga0206349_1142056 Ga0206349_11420563 367
194 3300020076 Ga0206355_1417348 Ga0206355_14173483 367
195 3300020077 Ga0206351_10877176 Ga0206351_108771765 367
196 3300020080 Ga0206350_11470775 Ga0206350_114707751 367
197 3300020610 Ga0154015_1191932 Ga0154015_11919328 367
198 3300021361 Ga0213872_10002904 Ga0213872_100029042 367
199 3300021361 Ga0213872_10019315 Ga0213872_100193153 367
200 3300022467 Ga0224712_10083290 Ga0224712_100832901 367
201 3300025206 Ga0209435_100040 Ga0209435_10004048 367
202 3300025206 Ga0209435_100387 Ga0209435_1003878 367
203 3300025224 Ga0209784_100002 Ga0209784_1000021528 367
204 3300025224 Ga0209784_100055 Ga0209784_100055164 367
205 3300025224 Ga0209784_100258 Ga0209784_10025831 367
206 3300025225 Ga0209566_100002 Ga0209566_1000022389 367
207 3300025225 Ga0209566_100003 Ga0209566_1000031528 367
208 3300025225 Ga0209566_100966 Ga0209566_1009665 367
209 3300025225 Ga0209566_100984 Ga0209566_1009843 367
210 3300025226 Ga0209674_100004 Ga0209674_1000041528 367
211 3300025226 Ga0209674_100090 Ga0209674_10009022 367
212 3300025226 Ga0209674_100264 Ga0209674_10026431 367
213 3300025228 Ga0209672_100122 Ga0209672_10012237 367
214 3300025229 Ga0209147_100002 Ga0209147_100002898 367
215 3300025229 Ga0209147_100141 Ga0209147_10014151 367
216 3300025230 Ga0209563_100006 Ga0209563_1000061528 367
217 3300025230 Ga0209563_100095 Ga0209563_1000958 367
218 3300025230 Ga0209563_102263 Ga0209563_1022632 367
219 3300025233 Ga0209437_100229 Ga0209437_10022935 367
220 3300025242 Ga0209258_100002 Ga0209258_100002898 367
221 3300025242 Ga0209258_100346 Ga0209258_10034611 367
222 3300025246 Ga0209646_1000019 Ga0209646_1000019341 367
223 3300025246 Ga0209646_1000218 Ga0209646_10002181 367
224 3300025250 Ga0209026_1000534 Ga0209026_10005341 367
225 3300025250 Ga0209026_1003442 Ga0209026_10034422 367
226 3300025253 Ga0209677_100003 Ga0209677_1000031528 367
227 3300025253 Ga0209677_100208 Ga0209677_10020839 367
228 3300025254 Ga0209148_1000118 Ga0209148_10001189 367
229 3300025254 Ga0209148_1002036 Ga0209148_10020365 367
230 3300025256 Ga0209759_1002058 Ga0209759_10020582 367
231 3300025256 Ga0209759_1008936 Ga0209759_10089363 367
232 3300025272 Ga0209455_1000009 Ga0209455_1000009780 367
233 3300025913 Ga0207695_10001497 Ga0207695_100014976 367
234 3300025913 Ga0207695_10015511 Ga0207695_100155115 367
235 3300025913 Ga0207695_10023563 Ga0207695_100235636 367
236 3300025920 Ga0207649_10000290 Ga0207649_1000029012 367
237 3300025924 Ga0207694_10000532 Ga0207694_1000053226 367
238 3300025932 Ga0207690_10005613 Ga0207690_100056136 367
239 3300025935 Ga0207709_10000015 Ga0207709_10000015295 367
240 3300025938 Ga0207704_10062796 Ga0207704_100627962 367
241 3300025945 Ga0207679_10000028 Ga0207679_10000028108 367
242 3300025949 Ga0207667_10000334 Ga0207667_1000033456 367
243 3300025981 Ga0207640_10000078 Ga0207640_1000007861 367
244 3300026067 Ga0207678_10000787 Ga0207678_100007873 367
245 3300026078 Ga0207702_10000149 Ga0207702_1000014954 367
246 3300026116 Ga0207674_10009496 Ga0207674_100094962 367
247 3300027111 Ga0209281_1000007 Ga0209281_1000007520 367
248 3300027671 Ga0209588_1006411 Ga0209588_10064112 367
249 3300028558 Ga0265326_10006378 Ga0265326_100063783 367
250 3300031251 Ga0265327_10000200 Ga0265327_1000020042 367
251 3300031548 Ga0307408_100000411 Ga0307408_10000041115 367
252 3300031665 Ga0316575_10001671 Ga0316575_100016712 367
253 3300031691 Ga0316579_10000074 Ga0316579_100000741 367
254 3300031691 Ga0316579_10003584 Ga0316579_100035844 367
255 3300031691 Ga0316579_10059030 Ga0316579_100590302 367
256 3300031727 Ga0316576_10000087 Ga0316576_1000008725 367
257 3300031727 Ga0316576_10011865 Ga0316576_100118654 367
258 3300031727 Ga0316576_10025135 Ga0316576_100251352 367
259 3300031727 Ga0316576_10104542 Ga0316576_101045422 367
260 3300031727 Ga0316576_10111286 Ga0316576_101112862 367
261 3300031727 Ga0316576_10177171 Ga0316576_101771712 367
262 3300031728 Ga0316578_10032085 Ga0316578_100320852 367
263 3300031728 Ga0316578_10039250 Ga0316578_100392502 367
264 3300031733 Ga0316577_10005347 Ga0316577_100053471 367
265 3300031733 Ga0316577_10006097 Ga0316577_100060974 367
266 3300031733 Ga0316577_10009713 Ga0316577_100097132 367
267 3300031733 Ga0316577_10036111 Ga0316577_100361112 367
268 3300032133 Ga0316583_10006097 Ga0316583_100060974 367
269 3300032137 Ga0316585_10002613 Ga0316585_100026131 367
270 3300032137 Ga0316585_10003921 Ga0316585_100039212 367
271 3300032139 Ga0316580_10000107 Ga0316580_1000010712 367
272 3300032168 Ga0316593_10001211 Ga0316593_100012112 367
273 3300032168 Ga0316593_10001350 Ga0316593_100013502 367
274 3300032168 Ga0316593_10002714 Ga0316593_100027142 367
275 3300032168 Ga0316593_10003443 Ga0316593_100034434 367
276 3300032168 Ga0316593_10007946 Ga0316593_100079462 367
277 3300032168 Ga0316593_10038872 Ga0316593_100388721 367
278 3300033524 Ga0316592_1000034 Ga0316592_10000348 367
279 3300033524 Ga0316592_1012926 Ga0316592_10129261 367
280 3300033527 Ga0316586_1000087 Ga0316586_10000873 367
281 3300033528 Ga0316588_1000842 Ga0316588_10008421 367
282 3300033528 Ga0316588_1028700 Ga0316588_10287001 367
283 3300033529 Ga0316587_1000274 Ga0316587_10002744 367
284 3300033541 Ga0316596_1001239 Ga0316596_10012394 367
285 3300033541 Ga0316596_1003897 Ga0316596_10038972 367
286 3300035398 Ga0316574_0007008 Ga0316574_0007008_1441_2556 367
287 3300035398 Ga0316574_0056359 Ga0316574_0056359_1161_2279 367
288 3300035398 Ga0316574_0101512 Ga0316574_0101512_384_1499 367
289 3300036647 Ga0316582_0008519 Ga0316582_0008519_1745_2860 367
290 3300036647 Ga0316582_0012961 Ga0316582_0012961_209_1324 367
291 3300036647 Ga0316582_0021751 Ga0316582_0021751_1185_2303 367
292 3300036647 Ga0316582_0121934 Ga0316582_0121934_408_1523 367
293 3300036712 Ga0316584_0000524 Ga0316584_0000524_18770_19888 367
294 3300036712 Ga0316584_0051350 Ga0316584_0051350_1924_3042 367
295 3300037312 Ga0395899_0039549 Ga0395899_0039549_547_1650 367
296 3300037418 Ga0395900_0017957 Ga0395900_0017957_4659_5762 367
297 3300037471 Ga0395905_0051782 Ga0395905_0051782_1832_2938 367
298 3300038726 Ga0400490_12170 Ga0400490_12170_51257_52375 367
299 3300038726 Ga0400490_52669 Ga0400490_52669_8440_9555 367
300 3300038727 Ga0400491_03802 Ga0400491_03802_7541_8656 367
301 3300044658 Ga0466972_0011576 Ga0466972_0011576_2923_4026 367
302 3300044693 Ga0466961_0011909 Ga0466961_0011909_835_1938 367
303 3300044706 Ga0466964_0042709 Ga0466964_0042709_492_1595 367
304 3300045049 Ga0466959_0037417 Ga0466959_0037417_1653_2756 367
305 3300045976 Ga0466967_0085810 Ga0466967_0085810_1722_2825 367
306 3300046454 Ga0495592_0066541 Ga0495592_0066541_1110_2234 367
307 3300046516 Ga0495628_0001910 Ga0495628_0001910_2825_3949 367
308 3300046529 Ga0495652_0005856 Ga0495652_0005856_5143_6267 367
309 3300046543 Ga0495645_0004911 Ga0495645_0004911_4988_6112 367
310 3300046678 Ga0495599_0000384 Ga0495599_0000384_4792_5916 367
311 3300048927 Ga0496124_0016702 Ga0496124_0016702_2314_3441 367
312 3300048928 Ga0496125_0001421 Ga0496125_0001421_7775_8887 367
313 3300048928 Ga0496125_0003647 Ga0496125_0003647_16466_17578 367
314 3300053077 Ga0495601_0028753 Ga0495601_0028753_476_1600 367
315 3300053119 Ga0500595_012408 Ga0500595_012408_1761_2870 367
316 3300053125 Ga0500618_002326 Ga0500618_002326_582_1697 367
317 3300059477 Ga0587084_000481 Ga0587084_000481_1046_2149 367
318 3300059504 Ga0587082_002643 Ga0587082_002643_278_1381 367
319 3300059508 Ga0587088_003197 Ga0587088_003197_151_1254 367
320 3300059511 Ga0587091_001233 Ga0587091_001233_632_1735 367
321 3300059640 Ga0587067_000140 Ga0587067_000140_2648_3751 367
322 3300059643 Ga0587072_000278 Ga0587072_000278_2700_3803 367
323 3300059645 Ga0587076_000199 Ga0587076_000199_421_1524 367
324 iso_pu_bacteria 2904479285 2904481015 367

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02774

Semialdhyde_dhC

Semialdehyde dehydrogenase, dimerisation domain

171

379

0.94

PF01118

Semialdhyde_dh

Semialdehyde dehydrogenase, NAD binding domain

31

149

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
3pzr-assembly1.cif.gz_A crystals structure of aspartate beta-semialdehyde dehydrogenase from vibrio cholerae with nadp and product of s-carbamoyl-l-cysteine 0.9825 1 366
1pqu-assembly2.cif.gz_B crystal structure of the h277n mutant of aspartate semialdehyde dehydrogenase from haemophilus influenzae bound with nadp, s-methyl cysteine sulfoxide and cacodylate 0.9822 2 365
7skb-assembly2.cif.gz_C crystal structure of aspartate-semialdehyde dehydrogenase from acinetobacter baumannii 0.9818 1 366
1gl3-assembly1.cif.gz_B aspartate beta-semialdehyde dehydrogenase in complex with nadp and substrate analogue s-methyl cysteine sulfoxide 0.9808 2 362
1t4d-assembly2.cif.gz_C-2 crystal structure of escherichia coli aspartate beta-semialdehyde dehydrogenase (ecasadh), at 1.95 angstrom resolution 0.9797 2 362
ID Description Score Start End Superfamily
af_P0A9Q9_3_137_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9853 3 135 3.40.50.720
1nx6A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9836 2 133 3.40.50.720
af_P0A9Q9_5_251_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.981 4 248 3.90.180.10
1ozaA02 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9744 134 347 3.30.360.10
af_P0A9Q9_5_251_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9693 4 248 3.90.180.10
ID Description Score Start End GO Terms
AF-A0A378F4N1-F1-model_v4 Putative aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) 1.001 66 130 GO:0004073
GO:0051287
AF-A0A353NG78-F1-model_v4 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) 0.9934 275 353 GO:0004073
GO:0008652
GO:0046983
AF-A0A7Y8B9Z8-F1-model_v4 deleted 0.9911 2 140
AF-A0A660NGG2-F1-model_v4 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) 0.991 2 121 GO:0004073
GO:0051287
AF-A0A5N7ZSV6-F1-model_v4 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) 0.9903 2 161 GO:0004073
GO:0051287

Feature Viewer

pLDDT pTM Quality
93.3 0.89 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar

Map