F406918

General Info

Members Datasets Scaffolds Average Seq Length
323 198 644 300

Family's Representative Sequence

Representative Sequence 3300010375|Ga0105239_10334500|Ga0105239_103345002
Length 323
Sequence LIEGNGANFVIQSEQMGTSVKPCVFIQTNAKQKLGALVGAYALKRNSANPDAFDVRIMHHADFPFFAAMEGKPFLREGVTRIWRNDDLQSFTPLRFMPPELMGYRGRAVVIDPDIFAVADISELINRDMQGKAILCRQRGMKTVGMTYASSVMLLDCAKLTHWRVEEQFNEMFEFKRDYMRWISLLLEPEGTIGLFEPEWNDFDRLTPRTKMVHNTHRRTQPWKTGLQVDFLPPERIPYFPIYAWVMKARRWAFGDYGLLGRYVAHPDPNQERLFFGLLRECMERGIVTEDEVKHEMAMKHVRPDALEVVERSELPAHSQAAA

Samples

Sample ID Description Type Environment
1 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
2 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
3 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
4 3300004798 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
5 3300004801 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
6 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
7 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
8 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
11 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
12 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
13 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
14 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
15 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
16 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
17 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
20 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
21 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
26 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
27 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
28 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
29 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
30 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
33 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
34 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
35 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
36 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
39 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
40 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
41 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
42 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
45 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
46 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
47 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
48 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
49 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
52 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
53 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
55 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
56 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
58 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
59 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
60 3300009993 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_106 metaG Metagenome Rhizosphere
61 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
62 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
63 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
64 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
65 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
66 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
67 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
68 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
69 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
72 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
108 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
111 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
112 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
113 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
114 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
115 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
116 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
117 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
118 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
119 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
120 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
121 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
122 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
123 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
124 3300033527 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
125 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
126 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
127 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
128 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
129 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
130 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
131 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
132 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
133 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
134 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
135 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
136 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
137 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
138 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
139 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
140 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
141 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
142 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
143 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
158 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
159 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
160 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
161 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
162 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
163 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
164 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
165 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
166 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
167 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
168 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
169 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
170 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
172 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
173 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
174 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
175 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
176 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
177 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
178 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
179 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
180 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
181 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
182 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
183 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
184 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
185 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
186 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
187 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
188 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
189 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
190 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
191 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
192 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
193 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
194 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
195 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
196 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
197 2842747753 Variovorax sp. R-72060 Isolate Unclassified
198 2883354860 Hypericibacter adhaerens R5959 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.83
Metatranscriptomes 1.55
Isolates 0.62

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.05
Nodule 0
Rhizoplane 1.86
Rhizosphere 88.85
Stem 0
Stem Tuber 0
Unclassified 10.84

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105239_10334500 3300010375 Bacteria 1709
2 JGI25153J46596_10000012 3300003215 Bacteria 308056
3 Ga0055542_1012127 3300003762 Unclassified 1501
4 Ga0058859_11710533 3300004798 Bacteria 1753
5 Ga0058860_10071179 3300004801 Bacteria 1764
6 Ga0065704_10085044 3300005289 Bacteria 3268
7 Ga0065707_10135965 3300005295 Bacteria 1841
8 Ga0070676_10023311 3300005328 Bacteria 3479
9 Ga0070670_100020180 3300005331 Bacteria 5725
10 Ga0070670_100111559 3300005331 Bacteria 2357
11 Ga0070677_10023830 3300005333 Bacteria 2270
12 Ga0068869_100010882 3300005334 Bacteria 5951
13 Ga0070666_10002922 3300005335 Bacteria 10335
14 Ga0068868_100001046 3300005338 Bacteria 18926
15 Ga0070689_100060873 3300005340 Bacteria 2936
16 Ga0070689_100232431 3300005340 Unclassified 1516
17 Ga0070668_100257874 3300005347 Bacteria 1449
18 Ga0070669_100176573 3300005353 Bacteria 1668
19 Ga0070669_100293230 3300005353 Bacteria 1306
20 Ga0070669_100333821 3300005353 Bacteria 1227
21 Ga0070675_100000484 3300005354 Bacteria 27194
22 Ga0070675_100028956 3300005354 Bacteria 4462
23 Ga0070675_100521892 3300005354 Bacteria 1072
24 Ga0070671_100001067 3300005355 Bacteria 20231
25 Ga0070674_100045681 3300005356 Bacteria 2993
26 Ga0070673_100000737 3300005364 Bacteria 18131
27 Ga0070673_100032394 3300005364 Bacteria 3935
28 Ga0070673_100275304 3300005364 Bacteria 1474
29 Ga0070667_100013276 3300005367 Bacteria 6804
30 Ga0070667_100062569 3300005367 Bacteria 3153
31 Ga0070678_100006483 3300005456 Bacteria 6872
32 Ga0070678_100047215 3300005456 Bacteria 3093
33 Ga0070662_100120677 3300005457 Bacteria 2009
34 Ga0070662_100297043 3300005457 Bacteria 1311
35 Ga0068867_100109633 3300005459 Bacteria 2119
36 Ga0070707_100014975 3300005468 Bacteria 7278
37 Ga0070696_100060172 3300005546 Bacteria 2656
38 Ga0070704_100116071 3300005549 Bacteria 2046
39 Ga0070664_100049236 3300005564 Bacteria 3563
40 Ga0068854_100078302 3300005578 Bacteria 2435
41 Ga0068852_100562189 3300005616 Bacteria 1142
42 Ga0068859_100002341 3300005617 Bacteria 19265
43 Ga0068859_100090078 3300005617 Unclassified 3118
44 Ga0068859_100839974 3300005617 Bacteria 1005
45 Ga0068864_100001096 3300005618 Bacteria 22702
46 Ga0068864_100264358 3300005618 Unclassified 1601
47 Ga0068861_100284053 3300005719 Bacteria 1426
48 Ga0068870_10030371 3300005840 Bacteria 2730
49 Ga0068863_100002489 3300005841 Bacteria 18315
50 Ga0068863_100029801 3300005841 Bacteria 5211
51 Ga0068858_100002357 3300005842 Bacteria 19086
52 Ga0068858_100110335 3300005842 Bacteria 2569
53 Ga0068860_100149938 3300005843 Unclassified 2245
54 Ga0068860_100153628 3300005843 Unclassified 2217
55 Ga0068860_100226304 3300005843 Bacteria 1817
56 Ga0068860_100375526 3300005843 Bacteria 1403
57 Ga0068862_100007996 3300005844 Bacteria 8750
58 Ga0068862_100150941 3300005844 Unclassified 2068
59 Ga0068862_100358558 3300005844 Bacteria 1354
60 Ga0081538_10009987 3300005981 Bacteria 7833
61 Ga0081538_10011847 3300005981 Bacteria 7040
62 Ga0081538_10012728 3300005981 Bacteria 6721
63 Ga0081538_10063287 3300005981 Bacteria 2102
64 Ga0081539_10014781 3300005985 Bacteria 5737
65 Ga0081539_10022024 3300005985 Bacteria 4231
66 Ga0075366_10036651 3300006195 Bacteria 2892
67 Ga0097621_100069331 3300006237 Bacteria 2911
68 Ga0075428_100373629 3300006844 Bacteria 1528
69 Ga0075428_100453088 3300006844 Bacteria 1374
70 Ga0075430_100240964 3300006846 Bacteria 1499
71 Ga0075431_100439124 3300006847 Bacteria 1302
72 Ga0075433_10078300 3300006852 Unclassified 2913
73 Ga0075434_100101710 3300006871 Unclassified 2881
74 Ga0075429_100279911 3300006880 Bacteria 1461
75 Ga0068865_100025239 3300006881 Bacteria 3907
76 Ga0068865_100151384 3300006881 Bacteria 1760
77 Ga0097620_100002341 3300006931 Bacteria 19265
78 Ga0097620_100090077 3300006931 Unclassified 3118
79 Ga0097620_100839863 3300006931 Bacteria 1005
80 Ga0075435_100385559 3300007076 Bacteria 1204
81 Ga0105240_10236655 3300009093 Unclassified 2119
82 Ga0111539_10000267 3300009094 Bacteria 62144
83 Ga0111539_10000820 3300009094 Bacteria 40334
84 Ga0111539_10176579 3300009094 Bacteria 2495
85 Ga0111539_10829526 3300009094 Bacteria 1076
86 Ga0105245_10329278 3300009098 Bacteria 1507
87 Ga0105247_10045217 3300009101 Unclassified 2701
88 Ga0114129_10060092 3300009147 Bacteria 5314
89 Ga0114129_10064833 3300009147 Bacteria 5099
90 Ga0114129_10386777 3300009147 Bacteria 1846
91 Ga0105242_10548611 3300009176 Bacteria 1108
92 Ga0105237_10135599 3300009545 Bacteria 2456
93 Ga0105249_10005839 3300009553 Bacteria 10650
94 Ga0105249_10154601 3300009553 Bacteria 2211
95 Ga0105028_104248 3300009993 Bacteria 1493
96 Ga0105239_10131400 3300010375 Unclassified 2785
97 Ga0105239_10380473 3300010375 Bacteria 1596
98 Ga0105246_10093782 3300011119 Bacteria 2169
99 Ga0157374_10146925 3300013296 Bacteria 2290
100 Ga0163162_10016009 3300013306 Bacteria 7331
101 Ga0157375_10004129 3300013308 Bacteria 12605
102 Ga0157375_10297379 3300013308 Bacteria 1778
103 Ga0163163_10001136 3300014325 Bacteria 22633
104 Ga0157380_10146910 3300014326 Bacteria 2033
105 Ga0157380_10168760 3300014326 Bacteria 1909
106 Ga0157379_10002185 3300014968 Bacteria 16265
107 Ga0163161_10022044 3300017792 Bacteria 4481
108 Ga0209148_1001877 3300025254 Bacteria 8701
109 Ga0209455_1001101 3300025272 Bacteria 13275
110 Ga0209758_1000059 3300025297 Bacteria 328458
111 Ga0209050_1011619 3300025298 Unclassified 4148
112 Ga0209257_1000114 3300025304 Bacteria 233013
113 Ga0207682_10002835 3300025893 Bacteria 7652
114 Ga0207682_10064009 3300025893 Bacteria 1545
115 Ga0207642_10014809 3300025899 Bacteria 2889
116 Ga0207710_10140141 3300025900 Bacteria 1167
117 Ga0207688_10155022 3300025901 Bacteria 1355
118 Ga0207680_10000561 3300025903 Bacteria 17589
119 Ga0207643_10038946 3300025908 Unclassified 2672
120 Ga0207662_10052631 3300025918 Bacteria 2423
121 Ga0207646_10031409 3300025922 Bacteria 4808
122 Ga0207681_10007567 3300025923 Bacteria 6656
123 Ga0207650_10011256 3300025925 Bacteria 6154
124 Ga0207659_10003658 3300025926 Bacteria 9262
125 Ga0207659_10558687 3300025926 Bacteria 973
126 Ga0207644_10000732 3300025931 Bacteria 20833
127 Ga0207706_10098749 3300025933 Bacteria 2568
128 Ga0207706_10183094 3300025933 Bacteria 1840
129 Ga0207686_10191854 3300025934 Bacteria 1457
130 Ga0207670_10005348 3300025936 Bacteria 7039
131 Ga0207669_10035408 3300025937 Bacteria 2840
132 Ga0207669_10074006 3300025937 Bacteria 2152
133 Ga0207691_10033917 3300025940 Bacteria 4751
134 Ga0207711_10002695 3300025941 Bacteria 15687
135 Ga0207689_10011694 3300025942 Bacteria 7521
136 Ga0207651_10000610 3300025960 Bacteria 15056
137 Ga0207651_10026344 3300025960 Bacteria 3630
138 Ga0207712_10135952 3300025961 Bacteria 1880
139 Ga0207712_10143591 3300025961 Bacteria 1835
140 Ga0207640_10048109 3300025981 Unclassified 2755
141 Ga0207658_10001491 3300025986 Bacteria 18191
142 Ga0207677_10000487 3300026023 Bacteria 25832
143 Ga0207703_10004039 3300026035 Bacteria 12128
144 Ga0207708_10022410 3300026075 Bacteria 4770
145 Ga0207641_10003677 3300026088 Bacteria 13506
146 Ga0207648_10033451 3300026089 Bacteria 4534
147 Ga0207676_10000575 3300026095 Bacteria 30209
148 Ga0207676_10234077 3300026095 Bacteria 1644
149 Ga0207674_10412965 3300026116 Bacteria 1304
150 Ga0207675_100032495 3300026118 Unclassified 4860
151 Ga0207675_100287096 3300026118 Bacteria 1600
152 Ga0207683_10005150 3300026121 Bacteria 11227
153 Ga0207683_10013082 3300026121 Bacteria 7079
154 Ga0207698_10073904 3300026142 Bacteria 2716
155 Ga0207428_10000092 3300027907 Bacteria 123897
156 Ga0207428_10000110 3300027907 Bacteria 111885
157 Ga0268265_10055031 3300028380 Bacteria 3021
158 Ga0268265_10088281 3300028380 Unclassified 2470
159 Ga0268264_10125256 3300028381 Unclassified 2270
160 Ga0268264_10243867 3300028381 Bacteria 1666
161 Ga0265327_10138307 3300031251 Unclassified 1140
162 Ga0307408_100006348 3300031548 Bacteria 7843
163 Ga0307408_100201508 3300031548 Unclassified 1611
164 Ga0316575_10024573 3300031665 Unclassified 2333
165 Ga0316579_10005521 3300031691 Bacteria 5113
166 Ga0316579_10006844 3300031691 Bacteria 4674
167 Ga0316576_10005889 3300031727 Bacteria 7565
168 Ga0316576_10100557 3300031727 Bacteria 2161
169 Ga0316576_10128597 3300031727 Bacteria 1905
170 Ga0316576_10176049 3300031727 Bacteria 1614
171 Ga0316576_10276057 3300031727 Bacteria 1259
172 Ga0316578_10023835 3300031728 Bacteria 3428
173 Ga0316578_10150787 3300031728 Bacteria 1400
174 Ga0307516_10192111 3300031730 Bacteria 1767
175 Ga0316577_10164511 3300031733 Bacteria 1251
176 Ga0307407_10054046 3300031903 Bacteria 2314
177 Ga0307409_100305067 3300031995 Bacteria 1483
178 Ga0307416_100413143 3300032002 Bacteria 1391
179 Ga0307416_100574793 3300032002 Bacteria 1203
180 Ga0307416_100695768 3300032002 Unclassified 1105
181 Ga0307411_10023837 3300032005 Bacteria 3635
182 Ga0307411_10136223 3300032005 Bacteria 1803
183 Ga0307415_100032723 3300032126 Bacteria 3367
184 Ga0316580_10006879 3300032139 Bacteria 3370
185 Ga0316586_1023237 3300033527 Bacteria 1035
186 Ga0316588_1037214 3300033528 Bacteria 1157
187 Ga0316596_1048282 3300033541 Unclassified 1125
188 Ga0316574_0006204 3300035398 Bacteria 6438
189 Ga0316574_0009999 3300035398 Bacteria 5337
190 Ga0316574_0011815 3300035398 Bacteria 4974
191 Ga0316574_0040086 3300035398 Bacteria 2882
192 Ga0316574_0048529 3300035398 Bacteria 2637
193 Ga0316574_0092892 3300035398 Bacteria 1926
194 Ga0316582_0023948 3300036647 Bacteria 3645
195 Ga0316582_0161405 3300036647 Bacteria 1518
196 Ga0316584_0053727 3300036712 Unclassified 3015
197 Ga0316584_0060231 3300036712 Bacteria 2843
198 Ga0316584_0156147 3300036712 Bacteria 1696
199 Ga0316581_0045108 3300037588 Bacteria 1346
200 Ga0395901_0067383 3300038443 Bacteria 3728
201 Ga0439441_034739 3300042001 Bacteria 991
202 Ga0439460_0023952 3300042461 Unclassified 1687
203 Ga0439460_0092746 3300042461 Bacteria 962
204 Ga0495629_0023021 3300046459 Bacteria 4440
205 Ga0495638_0053942 3300046460 Bacteria 2501
206 Ga0495634_0068945 3300046642 Bacteria 2335
207 Ga0495680_0025335 3300047322 Bacteria 4912
208 Ga0496103_0053395 3300048906 Unclassified 2505
209 Ga0496103_0215496 3300048906 Bacteria 1235
210 Ga0496107_0104944 3300048910 Bacteria 2074
211 Ga0496110_0304377 3300048913 Bacteria 1452
212 Ga0496113_0239389 3300048916 Unclassified 1448
213 Ga0496114_0156994 3300048917 Bacteria 1976
214 Ga0501031_0085314 3300049568 Bacteria 2059
215 Ga0501031_0258203 3300049568 Bacteria 1132
216 Ga0501032_0005815 3300049569 Bacteria 9122
217 Ga0501032_0167074 3300049569 Bacteria 1443
218 Ga0501032_0217483 3300049569 Bacteria 1244
219 Ga0501033_0003827 3300049570 Bacteria 12244
220 Ga0501034_0028577 3300049571 Bacteria 5675
221 Ga0501034_0045853 3300049571 Bacteria 4416
222 Ga0501036_0004743 3300049572 Bacteria 10972
223 Ga0501036_0009830 3300049572 Bacteria 7877
224 Ga0501037_0006896 3300049573 Bacteria 8295
225 Ga0501037_0021472 3300049573 Bacteria 4772
226 Ga0501037_0380698 3300049573 Bacteria 970
227 Ga0501038_0001340 3300049574 Bacteria 22421
228 Ga0501038_0072382 3300049574 Bacteria 2921
229 Ga0501038_0291370 3300049574 Bacteria 1283
230 Ga0501039_0000871 3300049575 Bacteria 21879
231 Ga0501039_0020046 3300049575 Bacteria 5125
232 Ga0501039_0031785 3300049575 Bacteria 4070
233 Ga0501039_0622207 3300049575 Bacteria 846
234 Ga0501040_0090527 3300049576 Bacteria 2126
235 Ga0501042_0219103 3300049578 Bacteria 1373
236 Ga0501043_0003485 3300049579 Bacteria 12933
237 Ga0501043_0013281 3300049579 Bacteria 6439
238 Ga0501043_0167231 3300049579 Bacteria 1717
239 Ga0501046_0003605 3300049580 Bacteria 14181
240 Ga0501046_0006676 3300049580 Bacteria 10192
241 Ga0501046_0187902 3300049580 Bacteria 1542
242 Ga0501047_0009878 3300049581 Bacteria 9020
243 Ga0501047_0241227 3300049581 Bacteria 1658
244 Ga0501048_0036259 3300049582 Unclassified 3545
245 Ga0501067_0015091 3300049583 Bacteria 4275
246 Ga0501068_0007051 3300049584 Bacteria 6221
247 Ga0501068_0020562 3300049584 Bacteria 3847
248 Ga0501069_0006068 3300049585 Bacteria 6308
249 Ga0501070_0003929 3300049586 Bacteria 12811
250 Ga0501070_0029884 3300049586 Bacteria 4565
251 Ga0501070_0055167 3300049586 Bacteria 3294
252 Ga0501070_0059198 3300049586 Bacteria 3176
253 Ga0501070_0064061 3300049586 Bacteria 3045
254 Ga0501072_0005297 3300049588 Bacteria 9819
255 Ga0501073_0009869 3300049589 Bacteria 7025
256 Ga0501073_0018459 3300049589 Bacteria 5042
257 Ga0501074_0002609 3300049590 Bacteria 12603
258 Ga0501074_0159603 3300049590 Bacteria 1610
259 Ga0501075_0122286 3300049591 Bacteria 1981
260 Ga0501075_0431410 3300049591 Bacteria 1005
261 Ga0501076_0062700 3300049592 Bacteria 2961
262 Ga0501076_0213709 3300049592 Bacteria 1576
263 Ga0501077_0071470 3300049593 Bacteria 2199
264 Ga0501077_0095822 3300049593 Bacteria 1881
265 Ga0501079_0020318 3300049741 Bacteria 5075
266 Ga0501079_0119570 3300049741 Bacteria 2048
267 Ga0501079_0247909 3300049741 Bacteria 1392
268 Ga0501080_0003244 3300049742 Bacteria 14351
269 Ga0501080_0009133 3300049742 Bacteria 9024
270 Ga0501080_0055367 3300049742 Bacteria 3694
271 Ga0501080_0230108 3300049742 Bacteria 1694
272 Ga0501080_0364530 3300049742 Unclassified 1303
273 Ga0501083_0013903 3300049744 Bacteria 5627
274 Ga0501083_0032846 3300049744 Bacteria 3556
275 Ga0501083_0235393 3300049744 Bacteria 1192
276 Ga0501035_0003475 3300049822 Bacteria 15081
277 Ga0501035_0006517 3300049822 Bacteria 10959
278 Ga0501035_0094434 3300049822 Bacteria 2630
279 Ga0501035_0246897 3300049822 Bacteria 1517
280 Ga0501044_0007116 3300049823 Bacteria 12304
281 Ga0501044_0020749 3300049823 Bacteria 7013
282 Ga0501044_0036073 3300049823 Bacteria 5175
283 Ga0501044_0143204 3300049823 Bacteria 2378
284 nmdc:mga0k408_69412_c1 3300050493 Bacteria 2056
285 nmdc:mga05p37_337704_c1 3300050507 Bacteria 1777
286 nmdc:mga09592_107194_c1 3300050508 Bacteria 2396
287 nmdc:mga06r32_217052_c1 3300050510 Bacteria 1900
288 nmdc:mga08y16_46_c1 3300050511 Bacteria 112050
289 nmdc:mga08y16_47_c1 3300050511 Bacteria 111829
290 nmdc:mga08y16_524081_c1 3300050511 Bacteria 1201
291 nmdc:mga08y16_644328_c1 3300050511 Bacteria 1064
292 nmdc:mga0n895_388115_c1 3300050512 Bacteria 1412
293 nmdc:mga0n895_93613_c1 3300050512 Unclassified 3008
294 nmdc:mga0a205_150668_c1 3300050515 Bacteria 2225
295 nmdc:mga0a205_162870_c1 3300050515 Unclassified 2126
296 Ga0495619_0188178 3300053085 Unclassified 1429
297 Ga0500578_0085241 3300053086 Bacteria 2007
298 Ga0500646_0002719 3300053090 Bacteria 4566
299 Ga0500555_001129 3300053103 Bacteria 8822
300 Ga0500555_003478 3300053103 Bacteria 4488
301 Ga0500556_0026981 3300053104 Bacteria 1913
302 Ga0500595_000421 3300053119 Bacteria 26693
303 Ga0500614_060269 3300053123 Bacteria 1019
304 Ga0500642_0001121 3300053130 Bacteria 7669
305 Ga0500658_0123364 3300053134 Bacteria 1150
306 Ga0500568_0008545 3300053139 Bacteria 4926
307 Ga0500577_0006751 3300053142 Unclassified 3184
308 Ga0500588_0004621 3300053146 Bacteria 2995
309 Ga0500588_0012795 3300053146 Bacteria 2090
310 Ga0500604_0005357 3300053151 Unclassified 3385
311 Ga0500616_0003318 3300053153 Bacteria 12407
312 Ga0500609_001818 3300053731 Bacteria 3094
313 Ga0500609_008540 3300053731 Bacteria 1382
314 Ga0501084_0010380 3300054114 Bacteria 7703
315 Ga0501084_0261029 3300054114 Bacteria 1462
316 Ga0501082_0024105 3300060353 Bacteria 5249
317 Ga0501082_0049487 3300060353 Bacteria 3624
318 Ga0501082_0163397 3300060353 Bacteria 1935
319 Ga0530510_0001855 3300061734 Bacteria 14445
320 Ga0530510_0275094 3300061734 Bacteria 1257
321 2842748190 2842747753 Bacteria 5578255
322 2883355238 2883354860 Bacteria 5865246
323 Ga0105239_10334500
324 JGI25153J46596_10000012
325 Ga0055542_1012127
326 Ga0058859_11710533
327 Ga0058860_10071179
328 Ga0065704_10085044
329 Ga0065707_10135965
330 Ga0070676_10023311
331 Ga0070670_100020180
332 Ga0070670_100111559
333 Ga0070677_10023830
334 Ga0068869_100010882
335 Ga0070666_10002922
336 Ga0068868_100001046
337 Ga0070689_100060873
338 Ga0070689_100232431
339 Ga0070668_100257874
340 Ga0070669_100176573
341 Ga0070669_100293230
342 Ga0070669_100333821
343 Ga0070675_100000484
344 Ga0070675_100028956
345 Ga0070675_100521892
346 Ga0070671_100001067
347 Ga0070674_100045681
348 Ga0070673_100000737
349 Ga0070673_100032394
350 Ga0070673_100275304
351 Ga0070667_100013276
352 Ga0070667_100062569
353 Ga0070678_100006483
354 Ga0070678_100047215
355 Ga0070662_100120677
356 Ga0070662_100297043
357 Ga0068867_100109633
358 Ga0070707_100014975
359 Ga0070696_100060172
360 Ga0070704_100116071
361 Ga0070664_100049236
362 Ga0068854_100078302
363 Ga0068852_100562189
364 Ga0068859_100002341
365 Ga0068859_100090078
366 Ga0068859_100839974
367 Ga0068864_100001096
368 Ga0068864_100264358
369 Ga0068861_100284053
370 Ga0068870_10030371
371 Ga0068863_100002489
372 Ga0068863_100029801
373 Ga0068858_100002357
374 Ga0068858_100110335
375 Ga0068860_100149938
376 Ga0068860_100153628
377 Ga0068860_100226304
378 Ga0068860_100375526
379 Ga0068862_100007996
380 Ga0068862_100150941
381 Ga0068862_100358558
382 Ga0081538_10009987
383 Ga0081538_10011847
384 Ga0081538_10012728
385 Ga0081538_10063287
386 Ga0081539_10014781
387 Ga0081539_10022024
388 Ga0075366_10036651
389 Ga0097621_100069331
390 Ga0075428_100373629
391 Ga0075428_100453088
392 Ga0075430_100240964
393 Ga0075431_100439124
394 Ga0075433_10078300
395 Ga0075434_100101710
396 Ga0075429_100279911
397 Ga0068865_100025239
398 Ga0068865_100151384
399 Ga0097620_100002341
400 Ga0097620_100090077
401 Ga0097620_100839863
402 Ga0075435_100385559
403 Ga0105240_10236655
404 Ga0111539_10000267
405 Ga0111539_10000820
406 Ga0111539_10176579
407 Ga0111539_10829526
408 Ga0105245_10329278
409 Ga0105247_10045217
410 Ga0114129_10060092
411 Ga0114129_10064833
412 Ga0114129_10386777
413 Ga0105242_10548611
414 Ga0105237_10135599
415 Ga0105249_10005839
416 Ga0105249_10154601
417 Ga0105028_104248
418 Ga0105239_10131400
419 Ga0105239_10380473
420 Ga0105246_10093782
421 Ga0157374_10146925
422 Ga0163162_10016009
423 Ga0157375_10004129
424 Ga0157375_10297379
425 Ga0163163_10001136
426 Ga0157380_10146910
427 Ga0157380_10168760
428 Ga0157379_10002185
429 Ga0163161_10022044
430 Ga0209148_1001877
431 Ga0209455_1001101
432 Ga0209758_1000059
433 Ga0209050_1011619
434 Ga0209257_1000114
435 Ga0207682_10002835
436 Ga0207682_10064009
437 Ga0207642_10014809
438 Ga0207710_10140141
439 Ga0207688_10155022
440 Ga0207680_10000561
441 Ga0207643_10038946
442 Ga0207662_10052631
443 Ga0207646_10031409
444 Ga0207681_10007567
445 Ga0207650_10011256
446 Ga0207659_10003658
447 Ga0207659_10558687
448 Ga0207644_10000732
449 Ga0207706_10098749
450 Ga0207706_10183094
451 Ga0207686_10191854
452 Ga0207670_10005348
453 Ga0207669_10035408
454 Ga0207669_10074006
455 Ga0207691_10033917
456 Ga0207711_10002695
457 Ga0207689_10011694
458 Ga0207651_10000610
459 Ga0207651_10026344
460 Ga0207712_10135952
461 Ga0207712_10143591
462 Ga0207640_10048109
463 Ga0207658_10001491
464 Ga0207677_10000487
465 Ga0207703_10004039
466 Ga0207708_10022410
467 Ga0207641_10003677
468 Ga0207648_10033451
469 Ga0207676_10000575
470 Ga0207676_10234077
471 Ga0207674_10412965
472 Ga0207675_100032495
473 Ga0207675_100287096
474 Ga0207683_10005150
475 Ga0207683_10013082
476 Ga0207698_10073904
477 Ga0207428_10000092
478 Ga0207428_10000110
479 Ga0268265_10055031
480 Ga0268265_10088281
481 Ga0268264_10125256
482 Ga0268264_10243867
483 Ga0265327_10138307
484 Ga0307408_100006348
485 Ga0307408_100201508
486 Ga0316575_10024573
487 Ga0316579_10005521
488 Ga0316579_10006844
489 Ga0316576_10005889
490 Ga0316576_10100557
491 Ga0316576_10128597
492 Ga0316576_10176049
493 Ga0316576_10276057
494 Ga0316578_10023835
495 Ga0316578_10150787
496 Ga0307516_10192111
497 Ga0316577_10164511
498 Ga0307407_10054046
499 Ga0307409_100305067
500 Ga0307416_100413143
501 Ga0307416_100574793
502 Ga0307416_100695768
503 Ga0307411_10023837
504 Ga0307411_10136223
505 Ga0307415_100032723
506 Ga0316580_10006879
507 Ga0316586_1023237
508 Ga0316588_1037214
509 Ga0316596_1048282
510 Ga0316574_0006204
511 Ga0316574_0009999
512 Ga0316574_0011815
513 Ga0316574_0040086
514 Ga0316574_0048529
515 Ga0316574_0092892
516 Ga0316582_0023948
517 Ga0316582_0161405
518 Ga0316584_0053727
519 Ga0316584_0060231
520 Ga0316584_0156147
521 Ga0316581_0045108
522 Ga0395901_0067383
523 Ga0439441_034739
524 Ga0439460_0023952
525 Ga0439460_0092746
526 Ga0495629_0023021
527 Ga0495638_0053942
528 Ga0495634_0068945
529 Ga0495680_0025335
530 Ga0496103_0053395
531 Ga0496103_0215496
532 Ga0496107_0104944
533 Ga0496110_0304377
534 Ga0496113_0239389
535 Ga0496114_0156994
536 Ga0501031_0085314
537 Ga0501031_0258203
538 Ga0501032_0005815
539 Ga0501032_0167074
540 Ga0501032_0217483
541 Ga0501033_0003827
542 Ga0501034_0028577
543 Ga0501034_0045853
544 Ga0501036_0004743
545 Ga0501036_0009830
546 Ga0501037_0006896
547 Ga0501037_0021472
548 Ga0501037_0380698
549 Ga0501038_0001340
550 Ga0501038_0072382
551 Ga0501038_0291370
552 Ga0501039_0000871
553 Ga0501039_0020046
554 Ga0501039_0031785
555 Ga0501039_0622207
556 Ga0501040_0090527
557 Ga0501042_0219103
558 Ga0501043_0003485
559 Ga0501043_0013281
560 Ga0501043_0167231
561 Ga0501046_0003605
562 Ga0501046_0006676
563 Ga0501046_0187902
564 Ga0501047_0009878
565 Ga0501047_0241227
566 Ga0501048_0036259
567 Ga0501067_0015091
568 Ga0501068_0007051
569 Ga0501068_0020562
570 Ga0501069_0006068
571 Ga0501070_0003929
572 Ga0501070_0029884
573 Ga0501070_0055167
574 Ga0501070_0059198
575 Ga0501070_0064061
576 Ga0501072_0005297
577 Ga0501073_0009869
578 Ga0501073_0018459
579 Ga0501074_0002609
580 Ga0501074_0159603
581 Ga0501075_0122286
582 Ga0501075_0431410
583 Ga0501076_0062700
584 Ga0501076_0213709
585 Ga0501077_0071470
586 Ga0501077_0095822
587 Ga0501079_0020318
588 Ga0501079_0119570
589 Ga0501079_0247909
590 Ga0501080_0003244
591 Ga0501080_0009133
592 Ga0501080_0055367
593 Ga0501080_0230108
594 Ga0501080_0364530
595 Ga0501083_0013903
596 Ga0501083_0032846
597 Ga0501083_0235393
598 Ga0501035_0003475
599 Ga0501035_0006517
600 Ga0501035_0094434
601 Ga0501035_0246897
602 Ga0501044_0007116
603 Ga0501044_0020749
604 Ga0501044_0036073
605 Ga0501044_0143204
606 nmdc:mga0k408_69412_c1
607 nmdc:mga05p37_337704_c1
608 nmdc:mga09592_107194_c1
609 nmdc:mga06r32_217052_c1
610 nmdc:mga08y16_46_c1
611 nmdc:mga08y16_47_c1
612 nmdc:mga08y16_524081_c1
613 nmdc:mga08y16_644328_c1
614 nmdc:mga0n895_388115_c1
615 nmdc:mga0n895_93613_c1
616 nmdc:mga0a205_150668_c1
617 nmdc:mga0a205_162870_c1
618 Ga0495619_0188178
619 Ga0500578_0085241
620 Ga0500646_0002719
621 Ga0500555_001129
622 Ga0500555_003478
623 Ga0500556_0026981
624 Ga0500595_000421
625 Ga0500614_060269
626 Ga0500642_0001121
627 Ga0500658_0123364
628 Ga0500568_0008545
629 Ga0500577_0006751
630 Ga0500588_0004621
631 Ga0500588_0012795
632 Ga0500604_0005357
633 Ga0500616_0003318
634 Ga0500609_001818
635 Ga0500609_008540
636 Ga0501084_0010380
637 Ga0501084_0261029
638 Ga0501082_0024105
639 Ga0501082_0049487
640 Ga0501082_0163397
641 Ga0530510_0001855
642 Ga0530510_0275094
643 2842748190
644 2883355238

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
3vdm-assembly1.cif.gz_A crystal structure of vlde, the pseudo-glycosyltransferase which catalyzes non-glycosidic c-n coupling in validamycin a biosynthesis 0.7486 2 40
3t7d-assembly1.cif.gz_B vall from streptomyces hygroscopicus in complex with trehalose 0.7265 2 40
7ui6-assembly1.cif.gz_A cryoem structure of large1 from c1 reconstruction 0.6781 3 199
1ss9-assembly1.cif.gz_A crystal structural analysis of active site mutant q189e of lgtc 0.6773 4 205
7zvj-assembly1.cif.gz_A homodimeric structure of large1 0.6714 1 196
ID Description Score Start End Superfamily
af_Q8IDW0_1062_1203_3.40.50.920 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.7215 1 40 3.40.50.920
af_P27128_30_292_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.713 5 205 3.90.550.10
af_P27129_28_297_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.7033 4 205 3.90.550.10
af_I1LP35_1_243_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.6917 1 198 3.90.550.10
af_Q0DYW4_1_188_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.6886 65 199 3.90.550.10
ID Description Score Start End GO Terms
AF-A0A3C0Q8Q2-F1-model_v4 Glycosyltransferase 0.9655 1 198
AF-A0A3C0Q8Q2-F1-model_v4 Glycosyltransferase 0.9607 1 198
AF-A0A3C7W425-F1-model_v4 Uncharacterized protein 0.9419 1 140
AF-A0A3C7W425-F1-model_v4 Uncharacterized protein 0.9354 1 140
AF-A0A7C7KZ86-F1-model_v4 Glycosyl transferase 0.9327 1 176

Map