F403718

General Info

Members Datasets Scaffolds Average Seq Length
316 212 632 243

Family's Representative Sequence

Representative Sequence 3300025944|Ga0207661_10313348|Ga0207661_103133481
Length 284
Sequence MTMANWFYFASPSTFYRLAGRTAPLFFALALVLGAAGLYEGLVVAPTDAQQGEVYRVIFIHVPAAWMSMWIYFVMACYGGLSLVFNTRLAAMMARSLAPTGAMFTFVALWTGSLWGRPTWGAYWVWDARLTSELVLLFLYFGFIALANAFEEPRRGDRAAALLALIGLVNLPIIYFSVKWWNTLHQGSSVSFRGTSMHVTMLASMLLMALSFWMYSIGTSLVRVRSIIRAAAQPVAHFMTYASTATTHQIHFDDACGGAIIPGALCANGDSAPGELCDAKLAGG

Samples

Sample ID Description Type Environment
1 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
13 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
19 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
20 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
21 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
25 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
26 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
27 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
28 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
29 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
30 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
31 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
36 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
37 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
38 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
39 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
40 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
41 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
42 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
43 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
44 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
45 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
46 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
47 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
49 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
50 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
51 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
52 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
53 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
54 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
55 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
57 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
58 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
59 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
61 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
63 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
64 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
65 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
66 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
67 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
68 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
69 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
70 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
71 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
72 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
73 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
74 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
75 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
76 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
77 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
78 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
79 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
80 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
81 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300027471 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes) (version 2) Metagenome Rhizosphere
124 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
125 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
126 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
127 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
128 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
131 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
132 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
133 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
134 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
135 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
136 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
137 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
138 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
139 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
140 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
141 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
142 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
143 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
144 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
145 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
146 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
147 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
148 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
149 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
150 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
151 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
152 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
153 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
154 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
155 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
156 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
157 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
158 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
159 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
160 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
161 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
162 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
163 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
164 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
165 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
166 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
167 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
168 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
169 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
170 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
171 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
172 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
173 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
174 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
175 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
176 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
177 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
178 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
179 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
180 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
181 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
182 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
183 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
184 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
185 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
186 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
187 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
188 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
189 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
190 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
191 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
192 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
193 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
194 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
195 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
196 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
197 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
198 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
199 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
200 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
201 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
202 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
203 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
204 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
205 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
206 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
207 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
208 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
209 2852684882 Xanthomonas sp. JAI131 Isolate Rhizosphere
210 8021622325 Xanthomonas sp. LMG12462 Isolate Rhizosphere
211 8021626552 Xanthomonas sp. LMG12460 Isolate Rhizosphere
212 8021648035 Xanthomonas sp. LMG 12461 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.42
Metatranscriptomes 0.32
Isolates 1.27

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.48
Nodule 0
Rhizoplane 2.53
Rhizosphere 91.14
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207661_10313348 3300025944 Bacteria 1409
2 SwRhRL2b_contig_1554851 2162886007 Bacteria 2229
3 Ga0058692_1000029 3300003856 Bacteria 189475
4 Ga0065704_10086854 3300005289 Bacteria 3078
5 Ga0065712_10128010 3300005290 Bacteria 1584
6 Ga0070658_10053539 3300005327 Bacteria 3276
7 Ga0070658_10147382 3300005327 Bacteria 1969
8 Ga0070676_10407632 3300005328 Bacteria 947
9 Ga0070683_100131909 3300005329 Bacteria 2365
10 Ga0070683_100458136 3300005329 Bacteria 1217
11 Ga0070670_100006223 3300005331 Bacteria 10095
12 Ga0070677_10222494 3300005333 Bacteria 923
13 Ga0070689_100007600 3300005340 Bacteria 7593
14 Ga0070689_100014433 3300005340 Bacteria 5738
15 Ga0070689_100052910 3300005340 Bacteria 3141
16 Ga0070689_100360745 3300005340 Bacteria 1221
17 Ga0070691_10030350 3300005341 Bacteria 2531
18 Ga0070691_10048766 3300005341 Bacteria 2016
19 Ga0070687_100097667 3300005343 Bacteria 1638
20 Ga0070661_100042795 3300005344 Bacteria 3307
21 Ga0070661_100101652 3300005344 Bacteria 2139
22 Ga0070661_100621177 3300005344 Bacteria 875
23 Ga0070669_100477282 3300005353 Bacteria 1031
24 Ga0070675_100025426 3300005354 Bacteria 4747
25 Ga0070671_100007485 3300005355 Bacteria 8727
26 Ga0070673_100012855 3300005364 Bacteria 5764
27 Ga0070673_100091291 3300005364 Bacteria 2490
28 Ga0070713_100417928 3300005436 Bacteria 1255
29 Ga0070701_10166994 3300005438 Bacteria 1279
30 Ga0070701_10174498 3300005438 Bacteria 1254
31 Ga0070708_100141703 3300005445 Bacteria 2229
32 Ga0070678_100028836 3300005456 Bacteria 3791
33 Ga0070681_10009569 3300005458 Bacteria 9532
34 Ga0070681_10182378 3300005458 Bacteria 2020
35 Ga0070706_100731850 3300005467 Bacteria 917
36 Ga0070699_100041083 3300005518 Bacteria 4003
37 Ga0070699_100653482 3300005518 Bacteria 960
38 Ga0070679_100061184 3300005530 Bacteria 3753
39 Ga0070684_100149461 3300005535 Bacteria 2115
40 Ga0068853_100034419 3300005539 Bacteria 4300
41 Ga0070672_100057685 3300005543 Bacteria 3048
42 Ga0070695_100018726 3300005545 Bacteria 4207
43 Ga0070693_100002877 3300005547 Bacteria 7935
44 Ga0070693_100230538 3300005547 Bacteria 1218
45 Ga0070665_100029830 3300005548 Bacteria 5489
46 Ga0070665_100133928 3300005548 Bacteria 2480
47 Ga0070704_100216825 3300005549 Bacteria 1554
48 Ga0068855_100006898 3300005563 Bacteria 13776
49 Ga0068855_100019481 3300005563 Bacteria 8153
50 Ga0068855_100106029 3300005563 Bacteria 3230
51 Ga0068855_100811721 3300005563 Bacteria 994
52 Ga0070664_100117134 3300005564 Bacteria 2330
53 Ga0068856_100039767 3300005614 Bacteria 4618
54 Ga0068852_100002623 3300005616 Bacteria 12422
55 Ga0068852_100090321 3300005616 Bacteria 2739
56 Ga0068852_100127613 3300005616 Bacteria 2338
57 Ga0068859_100040495 3300005617 Bacteria 4677
58 Ga0068866_10116302 3300005718 Bacteria 1500
59 Ga0068851_10119155 3300005834 Bacteria 1417
60 Ga0068858_100004364 3300005842 Bacteria 13876
61 Ga0068858_100033421 3300005842 Bacteria 4773
62 Ga0068858_100129424 3300005842 Bacteria 2366
63 Ga0075364_10044517 3300006051 Bacteria 2887
64 Ga0075432_10120681 3300006058 Bacteria 984
65 Ga0075362_10113592 3300006177 Bacteria 1277
66 Ga0075367_10364419 3300006178 Bacteria 913
67 Ga0075366_10002059 3300006195 Bacteria 10211
68 Ga0075366_10008713 3300006195 Bacteria 5646
69 Ga0075366_10167692 3300006195 Bacteria 1332
70 Ga0097621_100048179 3300006237 Bacteria 3456
71 Ga0097621_100075509 3300006237 Bacteria 2794
72 Ga0097621_100184697 3300006237 Bacteria 1803
73 Ga0075370_10086747 3300006353 Bacteria 1803
74 Ga0068871_100016525 3300006358 Bacteria 5562
75 Ga0068871_100103413 3300006358 Bacteria 2388
76 Ga0075428_100006434 3300006844 Bacteria 13069
77 Ga0075434_100539118 3300006871 Bacteria 1187
78 Ga0075429_100070004 3300006880 Bacteria 3054
79 Ga0068865_100058527 3300006881 Bacteria 2692
80 Ga0075436_100000522 3300006914 Bacteria 25028
81 Ga0097620_100040495 3300006931 Bacteria 4677
82 Ga0075435_100450581 3300007076 Bacteria 1110
83 Ga0105251_10000139 3300009011 Bacteria 74032
84 Ga0105240_10218937 3300009093 Bacteria 2219
85 Ga0105240_10780918 3300009093 Bacteria 1036
86 Ga0111539_10000221 3300009094 Bacteria 68470
87 Ga0105245_10024532 3300009098 Bacteria 5296
88 Ga0105245_10285838 3300009098 Bacteria 1614
89 Ga0105245_10598649 3300009098 Bacteria 1129
90 Ga0114129_10475941 3300009147 Bacteria 1635
91 Ga0114129_10603713 3300009147 Bacteria 1421
92 Ga0105243_10284094 3300009148 Bacteria 1492
93 Ga0105241_10032594 3300009174 Bacteria 3907
94 Ga0105241_10173734 3300009174 Bacteria 1781
95 Ga0105242_10002434 3300009176 Bacteria 14624
96 Ga0105242_10010009 3300009176 Bacteria 7261
97 Ga0105242_10025903 3300009176 Bacteria 4645
98 Ga0105242_10209473 3300009176 Bacteria 1736
99 Ga0105242_10556805 3300009176 Bacteria 1100
100 Ga0105248_10045652 3300009177 Bacteria 4912
101 Ga0105248_10046409 3300009177 Bacteria 4869
102 Ga0105248_10096753 3300009177 Bacteria 3326
103 Ga0105238_10032352 3300009551 Bacteria 5322
104 Ga0105238_10170376 3300009551 Bacteria 2153
105 Ga0105249_10855822 3300009553 Bacteria 975
106 Ga0157371_10302940 3300013102 Bacteria 1157
107 Ga0157370_10020147 3300013104 Bacteria 6666
108 Ga0157370_10503253 3300013104 Bacteria 1112
109 Ga0157369_10008819 3300013105 Bacteria 11553
110 Ga0157374_10022123 3300013296 Bacteria 5668
111 Ga0157374_10173040 3300013296 Bacteria 2107
112 Ga0157378_10056005 3300013297 Bacteria 3512
113 Ga0163162_10023953 3300013306 Bacteria 6024
114 Ga0163162_10347236 3300013306 Bacteria 1616
115 Ga0157372_10003179 3300013307 Bacteria 17712
116 Ga0157372_10878208 3300013307 Bacteria 1041
117 Ga0157375_10076396 3300013308 Bacteria 3376
118 Ga0157380_10048714 3300014326 Bacteria 3339
119 Ga0157380_10499981 3300014326 Bacteria 1181
120 Ga0157380_10783037 3300014326 Bacteria 969
121 Ga0157379_10081601 3300014968 Bacteria 2897
122 Ga0157379_10271600 3300014968 Bacteria 1542
123 Ga0157379_10385263 3300014968 Bacteria 1287
124 Ga0157376_10055172 3300014969 Bacteria 3315
125 Ga0157376_10069997 3300014969 Bacteria 2977
126 Ga0157376_10118060 3300014969 Bacteria 2347
127 Ga0182005_1001765 3300015265 Bacteria 8315
128 Ga0206356_10689602 3300020070 Bacteria 995
129 Ga0207656_10006036 3300025321 Bacteria 4332
130 Ga0207713_1000630 3300025735 Bacteria 34309
131 Ga0207692_10121742 3300025898 Bacteria 1462
132 Ga0207692_10231671 3300025898 Bacteria 1099
133 Ga0207688_10257079 3300025901 Bacteria 1059
134 Ga0207699_10128220 3300025906 Bacteria 1651
135 Ga0207643_10007663 3300025908 Bacteria 5799
136 Ga0207705_10026611 3300025909 Bacteria 4124
137 Ga0207705_10047499 3300025909 Bacteria 3087
138 Ga0207705_10394093 3300025909 Bacteria 1070
139 Ga0207654_10026745 3300025911 Bacteria 3128
140 Ga0207707_10083924 3300025912 Bacteria 2782
141 Ga0207707_10228195 3300025912 Bacteria 1620
142 Ga0207695_10010543 3300025913 Bacteria 11299
143 Ga0207695_10072503 3300025913 Bacteria 3513
144 Ga0207695_10161417 3300025913 Bacteria 2172
145 Ga0207693_10179468 3300025915 Bacteria 1666
146 Ga0207662_10117729 3300025918 Bacteria 1663
147 Ga0207662_10181202 3300025918 Bacteria 1356
148 Ga0207649_10019142 3300025920 Bacteria 3910
149 Ga0207649_10106513 3300025920 Bacteria 1865
150 Ga0207649_10120806 3300025920 Bacteria 1766
151 Ga0207652_10106343 3300025921 Bacteria 2483
152 Ga0207681_10253178 3300025923 Bacteria 1376
153 Ga0207681_10323194 3300025923 Bacteria 1228
154 Ga0207694_10012272 3300025924 Bacteria 6457
155 Ga0207694_10107583 3300025924 Bacteria 2215
156 Ga0207694_10353945 3300025924 Bacteria 1216
157 Ga0207650_10003714 3300025925 Bacteria 10437
158 Ga0207659_10062507 3300025926 Bacteria 2688
159 Ga0207659_10179458 3300025926 Bacteria 1676
160 Ga0207687_10052402 3300025927 Bacteria 2848
161 Ga0207687_10146498 3300025927 Bacteria 1797
162 Ga0207664_10128109 3300025929 Bacteria 2133
163 Ga0207644_10048457 3300025931 Bacteria 3038
164 Ga0207686_10026438 3300025934 Bacteria 3385
165 Ga0207686_10063102 3300025934 Bacteria 2355
166 Ga0207670_10022985 3300025936 Bacteria 3873
167 Ga0207670_10040464 3300025936 Bacteria 3059
168 Ga0207670_10055935 3300025936 Bacteria 2669
169 Ga0207670_10512583 3300025936 Bacteria 975
170 Ga0207669_10363022 3300025937 Bacteria 1123
171 Ga0207669_10476056 3300025937 Bacteria 994
172 Ga0207704_10064774 3300025938 Bacteria 2285
173 Ga0207691_10011165 3300025940 Bacteria 8621
174 Ga0207691_10052018 3300025940 Bacteria 3742
175 Ga0207711_10074681 3300025941 Bacteria 2949
176 Ga0207689_10181388 3300025942 Bacteria 1736
177 Ga0207689_10207800 3300025942 Bacteria 1617
178 Ga0207661_10103145 3300025944 Bacteria 2400
179 Ga0207679_10064816 3300025945 Bacteria 2732
180 Ga0207667_10015924 3300025949 Bacteria 8515
181 Ga0207667_10017769 3300025949 Bacteria 7999
182 Ga0207667_10040469 3300025949 Bacteria 4963
183 Ga0207667_10246470 3300025949 Bacteria 1828
184 Ga0207651_10015648 3300025960 Bacteria 4416
185 Ga0207651_10250398 3300025960 Bacteria 1449
186 Ga0207651_10404379 3300025960 Bacteria 1162
187 Ga0207640_10297906 3300025981 Bacteria 1274
188 Ga0207703_10009744 3300026035 Bacteria 7538
189 Ga0207703_10214839 3300026035 Bacteria 1717
190 Ga0207639_10021080 3300026041 Bacteria 4676
191 Ga0207639_10107169 3300026041 Bacteria 2269
192 Ga0207702_10247427 3300026078 Bacteria 1673
193 Ga0207641_10169810 3300026088 Bacteria 1990
194 Ga0207641_10924152 3300026088 Bacteria 867
195 Ga0207648_10015419 3300026089 Bacteria 7031
196 Ga0207676_10030048 3300026095 Bacteria 4074
197 Ga0207676_10197235 3300026095 Bacteria 1776
198 Ga0207674_10410272 3300026116 Bacteria 1309
199 Ga0207675_100174786 3300026118 Bacteria 2054
200 Ga0207675_100367211 3300026118 Bacteria 1413
201 Ga0207683_10019538 3300026121 Bacteria 5786
202 Ga0207683_10083687 3300026121 Bacteria 2835
203 Ga0207683_10134508 3300026121 Bacteria 2225
204 Ga0207698_10006187 3300026142 Bacteria 7451
205 Ga0207698_10007350 3300026142 Bacteria 6904
206 Ga0207698_10065524 3300026142 Bacteria 2854
207 Ga0207698_10078200 3300026142 Bacteria 2655
208 Ga0207698_10187282 3300026142 Bacteria 1839
209 Ga0209995_1002210 3300027471 Bacteria 3060
210 Ga0209968_1003985 3300027526 Bacteria 2216
211 Ga0209983_1020707 3300027665 Bacteria 1372
212 Ga0209974_10007640 3300027876 Bacteria 3720
213 Ga0207428_10010423 3300027907 Bacteria 8301
214 Ga0268266_10121790 3300028379 Bacteria 2322
215 Ga0268266_10372180 3300028379 Bacteria 1346
216 Ga0268264_10263556 3300028381 Bacteria 1607
217 Ga0268264_10311758 3300028381 Bacteria 1485
218 Ga0265324_10004275 3300029957 Bacteria 6523
219 Ga0265324_10015225 3300029957 Bacteria 2832
220 Ga0265330_10011577 3300031235 Bacteria 4135
221 Ga0265325_10018735 3300031241 Bacteria 3838
222 Ga0265340_10181120 3300031247 Bacteria 952
223 Ga0265331_10023331 3300031250 Bacteria 3144
224 Ga0265327_10000174 3300031251 Bacteria 138922
225 Ga0307408_100192111 3300031548 Bacteria 1646
226 Ga0265314_10009713 3300031711 Bacteria 8092
227 Ga0265314_10064196 3300031711 Bacteria 2488
228 Ga0265314_10152765 3300031711 Bacteria 1413
229 Ga0307407_10107352 3300031903 Bacteria 1746
230 Ga0307416_100104530 3300032002 Bacteria 2476
231 Ga0307416_100656504 3300032002 Bacteria 1134
232 Ga0307414_10288726 3300032004 Bacteria 1382
233 Ga0307411_10981955 3300032005 Bacteria 755
234 Ga0307415_100729958 3300032126 Bacteria 897
235 Ga0373955_0014288 3300035172 Bacteria 3859
236 Ga0373931_0029230 3300035691 Bacteria 2828
237 Ga0373931_0278603 3300035691 Bacteria 1026
238 Ga0373927_0215788 3300035695 Bacteria 1260
239 Ga0373933_0140827 3300035724 Bacteria 1523
240 Ga0373937_0055762 3300036401 Bacteria 3629
241 Ga0373925_0038419 3300037068 Bacteria 3539
242 Ga0395900_0023944 3300037418 Bacteria 6248
243 Ga0395905_0005660 3300037471 Bacteria 12707
244 Ga0395901_0076280 3300038443 Bacteria 3497
245 Ga0436365_0442840 3300039437 Bacteria 4126
246 Ga0439453_0006394 3300041408 Bacteria 1833
247 Ga0451806_073520 3300041462 Bacteria 2411
248 Ga0451807_0268917 3300041486 Bacteria 1546
249 Ga0439441_034442 3300042001 Bacteria 994
250 Ga0439435_0007518 3300042436 Bacteria 2495
251 Ga0453684_0007963 3300044712 Bacteria 19212
252 Ga0453684_0049555 3300044712 Bacteria 5536
253 Ga0466959_0158278 3300045049 Bacteria 1593
254 Ga0451576_0000029 3300045051 Bacteria 404449
255 Ga0451576_0307618 3300045051 Bacteria 1658
256 Ga0495651_0060448 3300046462 Bacteria 2902
257 Ga0495653_0061477 3300046463 Bacteria 2842
258 Ga0495608_0012451 3300046511 Bacteria 5903
259 Ga0495608_0033783 3300046511 Bacteria 3454
260 Ga0495628_0249697 3300046516 Bacteria 1325
261 Ga0495640_0024635 3300046533 Bacteria 4376
262 Ga0495621_0007587 3300046539 Bacteria 3220
263 Ga0495621_0009892 3300046539 Bacteria 2910
264 Ga0495645_0001390 3300046543 Bacteria 16357
265 Ga0495667_0104943 3300046559 Bacteria 1827
266 Ga0495599_0038077 3300046678 Bacteria 3021
267 Ga0495623_0050422 3300046679 Bacteria 2636
268 Ga0495604_0377364 3300047317 Bacteria 937
269 Ga0495680_0031489 3300047322 Bacteria 4316
270 Ga0495680_0274661 3300047322 Bacteria 1189
271 Ga0495684_0333569 3300047471 Bacteria 1081
272 Ga0496104_0246609 3300048907 Bacteria 1699
273 Ga0496108_0031475 3300048911 Bacteria 4403
274 Ga0496109_0521799 3300048912 Bacteria 1121
275 Ga0496110_0005800 3300048913 Bacteria 9708
276 Ga0496110_0189585 3300048913 Bacteria 1867
277 Ga0496111_0322944 3300048914 Bacteria 1143
278 Ga0496117_0000330 3300048920 Bacteria 83673
279 Ga0496118_0029716 3300048921 Bacteria 4577
280 Ga0496119_0000240 3300048922 Bacteria 77404
281 Ga0496120_0000011 3300048923 Bacteria 365549
282 Ga0496122_0000189 3300048925 Bacteria 142792
283 Ga0496123_0000068 3300048926 Bacteria 208797
284 Ga0496124_0000433 3300048927 Bacteria 74353
285 Ga0496126_0024818 3300048929 Bacteria 5781
286 Ga0501034_0071836 3300049571 Bacteria 3469
287 Ga0501038_0013726 3300049574 Bacteria 7386
288 Ga0501039_0006976 3300049575 Bacteria 8603
289 Ga0501047_0006119 3300049581 Bacteria 11307
290 Ga0501068_0077923 3300049584 Bacteria 2030
291 Ga0501069_0004773 3300049585 Bacteria 7015
292 Ga0501070_0027840 3300049586 Bacteria 4740
293 Ga0501073_0006933 3300049589 Bacteria 8435
294 Ga0501074_0000154 3300049590 Bacteria 35857
295 Ga0501079_0001763 3300049741 Bacteria 15436
296 Ga0501080_0005032 3300049742 Bacteria 11775
297 Ga0501080_0207812 3300049742 Bacteria 1795
298 Ga0501083_0000323 3300049744 Bacteria 30331
299 Ga0501044_0028237 3300049823 Bacteria 5923
300 Ga0501044_0155307 3300049823 Bacteria 2268
301 nmdc:mga0k408_32941_c1 3300050493 Bacteria 2961
302 nmdc:mga0k408_6890_c1 3300050493 Bacteria 4410
303 nmdc:mga05p37_742703_c1 3300050507 Bacteria 1083
304 nmdc:mga08y16_386_c1 3300050511 Bacteria 40374
305 nmdc:mga0n895_433635_c1 3300050512 Bacteria 1328
306 nmdc:mga0sz30_110293_c1 3300050516 Bacteria 1206
307 Ga0495601_0018823 3300053077 Bacteria 4206
308 Ga0495601_0040387 3300053077 Bacteria 2922
309 Ga0495601_0256470 3300053077 Bacteria 1142
310 Ga0495619_0031036 3300053085 Bacteria 3461
311 Ga0500641_0028615 3300053096 Bacteria 2178
312 Ga0501082_0219208 3300060353 Bacteria 1655
313 2852685694 2852684882 Bacteria 5463342
314 8021623528 8021622325 Bacteria 4844743
315 8021629020 8021626552 Bacteria 4665214
316 8021649928 8021648035 Bacteria 4772378
317 Ga0207661_10313348
318 SwRhRL2b_contig_1554851
319 Ga0058692_1000029
320 Ga0065704_10086854
321 Ga0065712_10128010
322 Ga0070658_10053539
323 Ga0070658_10147382
324 Ga0070676_10407632
325 Ga0070683_100131909
326 Ga0070683_100458136
327 Ga0070670_100006223
328 Ga0070677_10222494
329 Ga0070689_100007600
330 Ga0070689_100014433
331 Ga0070689_100052910
332 Ga0070689_100360745
333 Ga0070691_10030350
334 Ga0070691_10048766
335 Ga0070687_100097667
336 Ga0070661_100042795
337 Ga0070661_100101652
338 Ga0070661_100621177
339 Ga0070669_100477282
340 Ga0070675_100025426
341 Ga0070671_100007485
342 Ga0070673_100012855
343 Ga0070673_100091291
344 Ga0070713_100417928
345 Ga0070701_10166994
346 Ga0070701_10174498
347 Ga0070708_100141703
348 Ga0070678_100028836
349 Ga0070681_10009569
350 Ga0070681_10182378
351 Ga0070706_100731850
352 Ga0070699_100041083
353 Ga0070699_100653482
354 Ga0070679_100061184
355 Ga0070684_100149461
356 Ga0068853_100034419
357 Ga0070672_100057685
358 Ga0070695_100018726
359 Ga0070693_100002877
360 Ga0070693_100230538
361 Ga0070665_100029830
362 Ga0070665_100133928
363 Ga0070704_100216825
364 Ga0068855_100006898
365 Ga0068855_100019481
366 Ga0068855_100106029
367 Ga0068855_100811721
368 Ga0070664_100117134
369 Ga0068856_100039767
370 Ga0068852_100002623
371 Ga0068852_100090321
372 Ga0068852_100127613
373 Ga0068859_100040495
374 Ga0068866_10116302
375 Ga0068851_10119155
376 Ga0068858_100004364
377 Ga0068858_100033421
378 Ga0068858_100129424
379 Ga0075364_10044517
380 Ga0075432_10120681
381 Ga0075362_10113592
382 Ga0075367_10364419
383 Ga0075366_10002059
384 Ga0075366_10008713
385 Ga0075366_10167692
386 Ga0097621_100048179
387 Ga0097621_100075509
388 Ga0097621_100184697
389 Ga0075370_10086747
390 Ga0068871_100016525
391 Ga0068871_100103413
392 Ga0075428_100006434
393 Ga0075434_100539118
394 Ga0075429_100070004
395 Ga0068865_100058527
396 Ga0075436_100000522
397 Ga0097620_100040495
398 Ga0075435_100450581
399 Ga0105251_10000139
400 Ga0105240_10218937
401 Ga0105240_10780918
402 Ga0111539_10000221
403 Ga0105245_10024532
404 Ga0105245_10285838
405 Ga0105245_10598649
406 Ga0114129_10475941
407 Ga0114129_10603713
408 Ga0105243_10284094
409 Ga0105241_10032594
410 Ga0105241_10173734
411 Ga0105242_10002434
412 Ga0105242_10010009
413 Ga0105242_10025903
414 Ga0105242_10209473
415 Ga0105242_10556805
416 Ga0105248_10045652
417 Ga0105248_10046409
418 Ga0105248_10096753
419 Ga0105238_10032352
420 Ga0105238_10170376
421 Ga0105249_10855822
422 Ga0157371_10302940
423 Ga0157370_10020147
424 Ga0157370_10503253
425 Ga0157369_10008819
426 Ga0157374_10022123
427 Ga0157374_10173040
428 Ga0157378_10056005
429 Ga0163162_10023953
430 Ga0163162_10347236
431 Ga0157372_10003179
432 Ga0157372_10878208
433 Ga0157375_10076396
434 Ga0157380_10048714
435 Ga0157380_10499981
436 Ga0157380_10783037
437 Ga0157379_10081601
438 Ga0157379_10271600
439 Ga0157379_10385263
440 Ga0157376_10055172
441 Ga0157376_10069997
442 Ga0157376_10118060
443 Ga0182005_1001765
444 Ga0206356_10689602
445 Ga0207656_10006036
446 Ga0207713_1000630
447 Ga0207692_10121742
448 Ga0207692_10231671
449 Ga0207688_10257079
450 Ga0207699_10128220
451 Ga0207643_10007663
452 Ga0207705_10026611
453 Ga0207705_10047499
454 Ga0207705_10394093
455 Ga0207654_10026745
456 Ga0207707_10083924
457 Ga0207707_10228195
458 Ga0207695_10010543
459 Ga0207695_10072503
460 Ga0207695_10161417
461 Ga0207693_10179468
462 Ga0207662_10117729
463 Ga0207662_10181202
464 Ga0207649_10019142
465 Ga0207649_10106513
466 Ga0207649_10120806
467 Ga0207652_10106343
468 Ga0207681_10253178
469 Ga0207681_10323194
470 Ga0207694_10012272
471 Ga0207694_10107583
472 Ga0207694_10353945
473 Ga0207650_10003714
474 Ga0207659_10062507
475 Ga0207659_10179458
476 Ga0207687_10052402
477 Ga0207687_10146498
478 Ga0207664_10128109
479 Ga0207644_10048457
480 Ga0207686_10026438
481 Ga0207686_10063102
482 Ga0207670_10022985
483 Ga0207670_10040464
484 Ga0207670_10055935
485 Ga0207670_10512583
486 Ga0207669_10363022
487 Ga0207669_10476056
488 Ga0207704_10064774
489 Ga0207691_10011165
490 Ga0207691_10052018
491 Ga0207711_10074681
492 Ga0207689_10181388
493 Ga0207689_10207800
494 Ga0207661_10103145
495 Ga0207679_10064816
496 Ga0207667_10015924
497 Ga0207667_10017769
498 Ga0207667_10040469
499 Ga0207667_10246470
500 Ga0207651_10015648
501 Ga0207651_10250398
502 Ga0207651_10404379
503 Ga0207640_10297906
504 Ga0207703_10009744
505 Ga0207703_10214839
506 Ga0207639_10021080
507 Ga0207639_10107169
508 Ga0207702_10247427
509 Ga0207641_10169810
510 Ga0207641_10924152
511 Ga0207648_10015419
512 Ga0207676_10030048
513 Ga0207676_10197235
514 Ga0207674_10410272
515 Ga0207675_100174786
516 Ga0207675_100367211
517 Ga0207683_10019538
518 Ga0207683_10083687
519 Ga0207683_10134508
520 Ga0207698_10006187
521 Ga0207698_10007350
522 Ga0207698_10065524
523 Ga0207698_10078200
524 Ga0207698_10187282
525 Ga0209995_1002210
526 Ga0209968_1003985
527 Ga0209983_1020707
528 Ga0209974_10007640
529 Ga0207428_10010423
530 Ga0268266_10121790
531 Ga0268266_10372180
532 Ga0268264_10263556
533 Ga0268264_10311758
534 Ga0265324_10004275
535 Ga0265324_10015225
536 Ga0265330_10011577
537 Ga0265325_10018735
538 Ga0265340_10181120
539 Ga0265331_10023331
540 Ga0265327_10000174
541 Ga0307408_100192111
542 Ga0265314_10009713
543 Ga0265314_10064196
544 Ga0265314_10152765
545 Ga0307407_10107352
546 Ga0307416_100104530
547 Ga0307416_100656504
548 Ga0307414_10288726
549 Ga0307411_10981955
550 Ga0307415_100729958
551 Ga0373955_0014288
552 Ga0373931_0029230
553 Ga0373931_0278603
554 Ga0373927_0215788
555 Ga0373933_0140827
556 Ga0373937_0055762
557 Ga0373925_0038419
558 Ga0395900_0023944
559 Ga0395905_0005660
560 Ga0395901_0076280
561 Ga0436365_0442840
562 Ga0439453_0006394
563 Ga0451806_073520
564 Ga0451807_0268917
565 Ga0439441_034442
566 Ga0439435_0007518
567 Ga0453684_0007963
568 Ga0453684_0049555
569 Ga0466959_0158278
570 Ga0451576_0000029
571 Ga0451576_0307618
572 Ga0495651_0060448
573 Ga0495653_0061477
574 Ga0495608_0012451
575 Ga0495608_0033783
576 Ga0495628_0249697
577 Ga0495640_0024635
578 Ga0495621_0007587
579 Ga0495621_0009892
580 Ga0495645_0001390
581 Ga0495667_0104943
582 Ga0495599_0038077
583 Ga0495623_0050422
584 Ga0495604_0377364
585 Ga0495680_0031489
586 Ga0495680_0274661
587 Ga0495684_0333569
588 Ga0496104_0246609
589 Ga0496108_0031475
590 Ga0496109_0521799
591 Ga0496110_0005800
592 Ga0496110_0189585
593 Ga0496111_0322944
594 Ga0496117_0000330
595 Ga0496118_0029716
596 Ga0496119_0000240
597 Ga0496120_0000011
598 Ga0496122_0000189
599 Ga0496123_0000068
600 Ga0496124_0000433
601 Ga0496126_0024818
602 Ga0501034_0071836
603 Ga0501038_0013726
604 Ga0501039_0006976
605 Ga0501047_0006119
606 Ga0501068_0077923
607 Ga0501069_0004773
608 Ga0501070_0027840
609 Ga0501073_0006933
610 Ga0501074_0000154
611 Ga0501079_0001763
612 Ga0501080_0005032
613 Ga0501080_0207812
614 Ga0501083_0000323
615 Ga0501044_0028237
616 Ga0501044_0155307
617 nmdc:mga0k408_32941_c1
618 nmdc:mga0k408_6890_c1
619 nmdc:mga05p37_742703_c1
620 nmdc:mga08y16_386_c1
621 nmdc:mga0n895_433635_c1
622 nmdc:mga0sz30_110293_c1
623 Ga0495601_0018823
624 Ga0495601_0040387
625 Ga0495601_0256470
626 Ga0495619_0031036
627 Ga0500641_0028615
628 Ga0501082_0219208
629 2852685694
630 8021623528
631 8021629020
632 8021649928

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01578

Cytochrom_C_asm

Cytochrome C assembly protein

2

185

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
7f02-assembly1.cif.gz_C cytochrome c-type biogenesis protein ccmabcd from e. coli 0.8802 14 243
7f02-assembly1.cif.gz_C cytochrome c-type biogenesis protein ccmabcd from e. coli 0.8622 14 243
6zmq-assembly1.cif.gz_A cytochrome c heme lyase ccmf 0.746 60 176
6dhy-assembly1.cif.gz_C crystallogrpahic tetramer of zn-bound ridc1 variant bearing two disulfide bonded cysteines 0.632 64 179
1ktm-assembly1.cif.gz_A solution structure of fat domain of focal adhesion kinase 0.6064 67 183
ID Description Score Start End Superfamily
af_Q08CE6_110_279_1.20.140.150 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3; 0.7369 57 145 1.20.140.150
af_F1LZS9_42_166_1.20.120.350 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Voltage-gated potassium channels. Chain C 0.6589 68 177 1.20.120.350
af_Q9H1K6_144_260_1.20.120.230 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Alpha-catenin/vinculin-like 0.6486 67 178 1.20.120.230
af_K7LBY1_446_560_1.20.140.150 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3; 0.6284 94 183 1.20.140.150
af_Q64727_719_835_1.20.120.230 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Alpha-catenin/vinculin-like 0.6131 67 180 1.20.120.230
ID Description Score Start End GO Terms
AF-A0A3C0GVK2-F1-model_v4 Heme exporter protein C (Cytochrome c-type biogenesis protein CcmC) 0.9518 8 183 GO:0005886
GO:0015232
GO:0017004
GO:0020037
AF-A0A7C8D923-F1-model_v4 Heme exporter protein C (Cytochrome c-type biogenesis protein CcmC) 0.9466 9 171 GO:0005886
GO:0015232
GO:0017004
GO:0020037
AF-A0A2M7FI51-F1-model_v4 Heme exporter protein C 0.9447 5 177 GO:0005886
GO:0015232
GO:0017004
GO:0020037
AF-A0A7W2TUZ6-F1-model_v4 Heme exporter protein C (Cytochrome c-type biogenesis protein) 0.9438 5 246 GO:0005886
GO:0015232
GO:0017004
GO:0020037
AF-A0A259FQW6-F1-model_v4 Heme exporter protein C (Cytochrome c-type biogenesis protein) 0.9414 17 243 GO:0005886
GO:0015232
GO:0017004
GO:0020037
GO:1903607

Map