F403338

General Info

Members Datasets Scaffolds Average Seq Length
315 214 630 230

Family's Representative Sequence

Representative Sequence 3300046660|Ga0495625_0144607|Ga0495625_0144607_683_1483
Length 266
Sequence MATQIEIAQRVVESILAQKLKPGERLGEQELADMFGVSRTLVREALMQLQARGFVEVRSRKGWYVVEPSIEQARDAFAARRALESGMLRESELLREAGKPLQTVIKRLRQHLKDEQAAIEATDVATRTFLLADFHVCLAECLGHRVLCDLLRDLTARTTLVASLYQSTHDARESCADHGRIVAALAAGDAEGAARLMLAHIGGVENALGQSAAARDPLERLRASLAPLTRLGPSAGPPQAGPHPLGGSPNVPVRRGVKAKPSTIPR

Samples

Sample ID Description Type Environment
1 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
2 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
3 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
4 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
5 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
6 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
7 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
12 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
13 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
14 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
22 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
23 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
24 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
25 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
26 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
27 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
28 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
29 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
30 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
31 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
34 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
35 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
36 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
37 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
38 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
39 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
40 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
41 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
42 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
43 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
44 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
45 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
46 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
47 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
48 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
49 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
52 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
53 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
54 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
55 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
56 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
58 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
59 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
60 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
61 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
62 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
63 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
64 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
65 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
66 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
67 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
68 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
69 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
70 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
71 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
72 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
73 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
74 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
75 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
76 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
77 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
78 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
79 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
81 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
118 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
119 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
121 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
122 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
123 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
124 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
125 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
126 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
127 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
128 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
129 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
130 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
131 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
132 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
133 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
134 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
135 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
136 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
137 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
138 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
139 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
140 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
141 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
142 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
143 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
144 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
145 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
146 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
147 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
148 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
149 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
150 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
151 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
152 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
153 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
154 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
155 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
156 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
157 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
158 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
159 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
160 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
161 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
162 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
163 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
164 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
165 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
166 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
167 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
168 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
169 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
170 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
171 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
172 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
173 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
174 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
175 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
176 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
177 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
178 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
179 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
180 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
181 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
182 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
183 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
184 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
185 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
186 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
187 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
188 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
189 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
190 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
191 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
192 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
193 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
194 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
195 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
196 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
197 2511231002 Polaromonas sp. CF318 Isolate Rhizosphere
198 2547132374 Acidovorax radicis N35 Isolate Unclassified
199 2643221570 Acidovorax sp. Root568 Isolate Unclassified
200 2643221596 Acidovorax sp. Root70 Isolate Unclassified
201 2643221609 Acidovorax sp. Root217 Isolate Unclassified
202 2643221611 Acidovorax sp. Root219 Isolate Unclassified
203 2643221652 Acidovorax sp. Root402 Isolate Unclassified
204 2643221654 Rhizobacter sp. Root404 Isolate Unclassified
205 2643221717 Acidovorax sp. Root267 Isolate Unclassified
206 2721755523 Delftia sp. HK171 Isolate Unclassified
207 2738543012 Acidovorax sp. CF301 Isolate Unclassified
208 2738543013 Variovorax sp. BT01 Isolate Unclassified
209 2816332133 Acidovorax radicis 2721A Isolate Unclassified
210 2894023352 Diaphorobacter ruginosibacter DSM 27467 Isolate Nodule
211 2928115317 Pseudacidovorax sp. 1753 Isolate Rhizosphere
212 2932422444 Comamonas sp. 4034 Isolate Rhizosphere
213 2974320154 Acidovorax wautersii SORGH_AS 335 Isolate Unclassified
214 2990710928 Acidovorax delafieldii SLBN-75 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.29
Metatranscriptomes 0
Isolates 5.71

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 18.1
Nodule 0.95
Rhizoplane 0.95
Rhizosphere 70.16
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495625_0144607 3300046660 Bacteria 1602
2 JGI25159J45721_1000313 3300002987 Bacteria 22625
3 JGI25160J50197_1000226 3300003354 Bacteria 44500
4 JGI25161J50226_1000037 3300003374 Bacteria 133331
5 Ga0055537_1012004 3300003773 Bacteria 1715
6 Ga0055543_1000708 3300004625 Bacteria 16941
7 Ga0070676_10081008 3300005328 Bacteria 1969
8 Ga0070676_10135885 3300005328 Bacteria 1560
9 Ga0070676_10145160 3300005328 Bacteria 1514
10 Ga0070670_100003146 3300005331 Bacteria 13648
11 Ga0070670_100243278 3300005331 Bacteria 1567
12 Ga0070677_10025987 3300005333 Bacteria 2191
13 Ga0068869_100431668 3300005334 Bacteria 1089
14 Ga0068869_100635622 3300005334 Bacteria 905
15 Ga0070666_10266978 3300005335 Bacteria 1214
16 Ga0070682_100237098 3300005337 Bacteria 1308
17 Ga0068868_100013231 3300005338 Bacteria 6045
18 Ga0068868_100096462 3300005338 Bacteria 2388
19 Ga0070668_100646974 3300005347 Bacteria 929
20 Ga0070669_100005491 3300005353 Bacteria 9153
21 Ga0070675_100000072 3300005354 Bacteria 58324
22 Ga0070671_100052124 3300005355 Bacteria 3403
23 Ga0070671_100052922 3300005355 Bacteria 3375
24 Ga0070671_100077343 3300005355 Bacteria 2781
25 Ga0070671_100089016 3300005355 Bacteria 2584
26 Ga0070674_100003038 3300005356 Bacteria 9334
27 Ga0070674_100345687 3300005356 Bacteria 1200
28 Ga0070673_100000785 3300005364 Bacteria 17673
29 Ga0070667_100002744 3300005367 Bacteria 15234
30 Ga0070667_100087015 3300005367 Bacteria 2682
31 Ga0070667_100176069 3300005367 Bacteria 1891
32 Ga0070708_100041461 3300005445 Bacteria 4036
33 Ga0070708_100771621 3300005445 Bacteria 904
34 Ga0070663_100370585 3300005455 Bacteria 1164
35 Ga0070678_100051454 3300005456 Bacteria 2986
36 Ga0070678_100151592 3300005456 Bacteria 1868
37 Ga0070678_100288999 3300005456 Bacteria 1389
38 Ga0070662_100013653 3300005457 Bacteria 5408
39 Ga0068867_100004430 3300005459 Bacteria 9872
40 Ga0068867_100074043 3300005459 Bacteria 2551
41 Ga0070706_100019794 3300005467 Bacteria 6206
42 Ga0070707_100233433 3300005468 Bacteria 1790
43 Ga0070698_100136072 3300005471 Bacteria 2411
44 Ga0070699_101053332 3300005518 Bacteria 746
45 Ga0068853_100280148 3300005539 Bacteria 1537
46 Ga0068853_100453385 3300005539 Bacteria 1206
47 Ga0070672_100000977 3300005543 Bacteria 17279
48 Ga0070665_100026107 3300005548 Bacteria 5881
49 Ga0070665_100255977 3300005548 Bacteria 1751
50 Ga0070664_100138225 3300005564 Bacteria 2144
51 Ga0068854_100231506 3300005578 Bacteria 1467
52 Ga0068854_100264002 3300005578 Bacteria 1379
53 Ga0068852_100120263 3300005616 Bacteria 2403
54 Ga0068852_100229628 3300005616 Bacteria 1768
55 Ga0068852_100650957 3300005616 Bacteria 1061
56 Ga0068859_100080918 3300005617 Bacteria 3290
57 Ga0068859_100348973 3300005617 Bacteria 1575
58 Ga0068864_100035347 3300005618 Bacteria 4253
59 Ga0068863_100073456 3300005841 Bacteria 3235
60 Ga0075365_10110036 3300006038 Bacteria 1893
61 Ga0075363_100009229 3300006048 Bacteria 4634
62 Ga0075363_100015875 3300006048 Bacteria 3709
63 Ga0075363_100042049 3300006048 Bacteria 2412
64 Ga0075364_10010350 3300006051 Bacteria 5631
65 Ga0075364_10012194 3300006051 Bacteria 5250
66 Ga0075364_10157751 3300006051 Bacteria 1531
67 Ga0075432_10004249 3300006058 Bacteria 4877
68 Ga0075362_10006192 3300006177 Bacteria 4443
69 Ga0075362_10075168 3300006177 Bacteria 1549
70 Ga0075367_10078092 3300006178 Bacteria 1999
71 Ga0075366_10000620 3300006195 Bacteria 16683
72 Ga0075366_10004392 3300006195 Bacteria 7565
73 Ga0075366_10005472 3300006195 Bacteria 6881
74 Ga0075366_10026221 3300006195 Bacteria 3412
75 Ga0075366_10140746 3300006195 Bacteria 1458
76 Ga0075366_10197086 3300006195 Bacteria 1224
77 Ga0075370_10001318 3300006353 Bacteria 10635
78 Ga0075370_10002624 3300006353 Bacteria 8388
79 Ga0075370_10011701 3300006353 Bacteria 4618
80 Ga0075370_10029431 3300006353 Bacteria 3060
81 Ga0075370_10083176 3300006353 Bacteria 1841
82 Ga0075370_10091049 3300006353 Bacteria 1759
83 Ga0075430_100009079 3300006846 Bacteria 8400
84 Ga0075429_100011122 3300006880 Bacteria 7790
85 Ga0068865_100111590 3300006881 Bacteria 2018
86 Ga0097620_100080913 3300006931 Bacteria 3290
87 Ga0097620_100348950 3300006931 Bacteria 1575
88 Ga0079104_1000008 3300006946 Bacteria 371223
89 Ga0105250_10000327 3300009092 Bacteria 36659
90 Ga0105240_10004737 3300009093 Bacteria 20539
91 Ga0105240_10135401 3300009093 Bacteria 2951
92 Ga0105245_10141225 3300009098 Bacteria 2268
93 Ga0105247_10275995 3300009101 Bacteria 1158
94 Ga0114129_10057553 3300009147 Bacteria 5439
95 Ga0105243_10001757 3300009148 Bacteria 18663
96 Ga0105243_10169643 3300009148 Bacteria 1889
97 Ga0105241_10601315 3300009174 Bacteria 993
98 Ga0105242_10072417 3300009176 Bacteria 2862
99 Ga0105242_10518742 3300009176 Bacteria 1137
100 Ga0105237_10000942 3300009545 Bacteria 39101
101 Ga0105237_10044079 3300009545 Bacteria 4492
102 Ga0105238_10118287 3300009551 Bacteria 2630
103 Ga0105239_10022455 3300010375 Bacteria 6956
104 Ga0105239_10162154 3300010375 Bacteria 2498
105 Ga0105246_10324395 3300011119 Bacteria 1253
106 Ga0157378_10788396 3300013297 Bacteria 975
107 Ga0163162_10046052 3300013306 Bacteria 4372
108 Ga0163162_10539009 3300013306 Bacteria 1296
109 Ga0157375_10293016 3300013308 Bacteria 1790
110 Ga0157375_10875142 3300013308 Bacteria 1044
111 Ga0157380_10224707 3300014326 Bacteria 1682
112 Ga0157377_10271933 3300014745 Bacteria 1107
113 Ga0157379_10055550 3300014968 Bacteria 3537
114 Ga0157379_10083564 3300014968 Bacteria 2862
115 Ga0157379_10424023 3300014968 Bacteria 1225
116 Ga0157376_10652113 3300014969 Bacteria 1053
117 Ga0163161_10008480 3300017792 Bacteria 7118
118 Ga0213872_10002111 3300021361 Bacteria 11964
119 Ga0207425_1002758 3300025245 Bacteria 5972
120 Ga0209565_1000987 3300025263 Bacteria 14624
121 Ga0209130_1000202 3300025284 Bacteria 80333
122 Ga0209675_1007019 3300025291 Bacteria 4396
123 Ga0209025_1004445 3300025294 Bacteria 12176
124 Ga0209758_1003740 3300025297 Bacteria 13475
125 Ga0209050_1003769 3300025298 Bacteria 10850
126 Ga0207426_1000145 3300025302 Bacteria 191065
127 Ga0207696_1002515 3300025711 Bacteria 8949
128 Ga0207682_10002371 3300025893 Bacteria 8480
129 Ga0207688_10062851 3300025901 Bacteria 2093
130 Ga0207680_10122460 3300025903 Bacteria 1703
131 Ga0207645_10022552 3300025907 Bacteria 4095
132 Ga0207645_10424217 3300025907 Bacteria 896
133 Ga0207643_10292521 3300025908 Bacteria 1012
134 Ga0207684_10032739 3300025910 Bacteria 4421
135 Ga0207695_10009307 3300025913 Bacteria 12159
136 Ga0207695_10132157 3300025913 Bacteria 2453
137 Ga0207671_10009182 3300025914 Bacteria 8293
138 Ga0207671_10146450 3300025914 Bacteria 1822
139 Ga0207681_10010823 3300025923 Bacteria 5603
140 Ga0207694_10851504 3300025924 Bacteria 771
141 Ga0207650_10002045 3300025925 Bacteria 14115
142 Ga0207650_10132829 3300025925 Bacteria 1950
143 Ga0207659_10000081 3300025926 Bacteria 58985
144 Ga0207687_10113196 3300025927 Bacteria 2018
145 Ga0207644_10002484 3300025931 Bacteria 11874
146 Ga0207644_10037015 3300025931 Bacteria 3430
147 Ga0207644_10068186 3300025931 Bacteria 2595
148 Ga0207644_10264958 3300025931 Bacteria 1375
149 Ga0207706_10027336 3300025933 Bacteria 5102
150 Ga0207686_10021190 3300025934 Bacteria 3726
151 Ga0207709_10000070 3300025935 Bacteria 183020
152 Ga0207709_10232890 3300025935 Bacteria 1335
153 Ga0207709_10559506 3300025935 Bacteria 900
154 Ga0207669_10026345 3300025937 Bacteria 3160
155 Ga0207669_10092380 3300025937 Bacteria 1974
156 Ga0207704_10164585 3300025938 Bacteria 1583
157 Ga0207691_10000330 3300025940 Bacteria 47260
158 Ga0207689_10079010 3300025942 Bacteria 2704
159 Ga0207689_10238685 3300025942 Bacteria 1502
160 Ga0207689_10517389 3300025942 Bacteria 1001
161 Ga0207689_10731237 3300025942 Bacteria 835
162 Ga0207679_10269110 3300025945 Bacteria 1457
163 Ga0207651_10005928 3300025960 Bacteria 6327
164 Ga0207668_10199900 3300025972 Bacteria 1591
165 Ga0207668_10203966 3300025972 Bacteria 1577
166 Ga0207640_10036407 3300025981 Bacteria 3089
167 Ga0207658_10000701 3300025986 Bacteria 29053
168 Ga0207658_10138762 3300025986 Bacteria 1964
169 Ga0207658_10804468 3300025986 Bacteria 853
170 Ga0207677_10050550 3300026023 Bacteria 2812
171 Ga0207677_10805455 3300026023 Bacteria 841
172 Ga0207677_10880556 3300026023 Bacteria 806
173 Ga0207703_10450177 3300026035 Bacteria 1202
174 Ga0207639_10028869 3300026041 Bacteria 4055
175 Ga0207639_10693847 3300026041 Bacteria 944
176 Ga0207678_10064828 3300026067 Bacteria 3139
177 Ga0207648_10009629 3300026089 Bacteria 9240
178 Ga0207648_10098080 3300026089 Bacteria 2565
179 Ga0207648_10340143 3300026089 Bacteria 1351
180 Ga0207676_10154512 3300026095 Bacteria 1980
181 Ga0207676_10231738 3300026095 Bacteria 1651
182 Ga0207674_10014649 3300026116 Bacteria 8647
183 Ga0207683_10002618 3300026121 Bacteria 15711
184 Ga0207683_10015591 3300026121 Bacteria 6469
185 Ga0207698_10141665 3300026142 Bacteria 2073
186 Ga0207698_10728955 3300026142 Bacteria 988
187 Ga0207698_10839647 3300026142 Bacteria 923
188 Ga0209281_1000029 3300027111 Bacteria 431495
189 Ga0207428_10118389 3300027907 Bacteria 2033
190 Ga0268266_10079918 3300028379 Bacteria 2848
191 Ga0307517_10001182 3300028786 Bacteria 43986
192 Ga0307517_10125372 3300028786 Bacteria 1876
193 Ga0307517_10163925 3300028786 Bacteria 1482
194 Ga0307515_10449959 3300028794 Bacteria 903
195 Ga0307513_10000015 3300031456 Bacteria 296183
196 Ga0307513_10058712 3300031456 Bacteria 4086
197 Ga0307513_10233523 3300031456 Bacteria 1650
198 Ga0307509_10054546 3300031507 Bacteria 4254
199 Ga0307509_10103497 3300031507 Bacteria 2875
200 Ga0307509_10237886 3300031507 Bacteria 1617
201 Ga0307408_100000221 3300031548 Bacteria 60975
202 Ga0307408_100016519 3300031548 Bacteria 4929
203 Ga0307508_10198480 3300031616 Bacteria 1607
204 Ga0307516_10095395 3300031730 Bacteria 2797
205 Ga0307405_10003016 3300031731 Bacteria 7624
206 Ga0307413_10029228 3300031824 Bacteria 3081
207 Ga0307410_10108635 3300031852 Bacteria 2003
208 Ga0307406_10001071 3300031901 Bacteria 15216
209 Ga0307406_10010909 3300031901 Bacteria 5139
210 Ga0307407_10159374 3300031903 Bacteria 1475
211 Ga0307412_10016817 3300031911 Bacteria 4367
212 Ga0307416_100017128 3300032002 Bacteria 5058
213 Ga0307416_100751071 3300032002 Bacteria 1068
214 Ga0307414_10007934 3300032004 Bacteria 5995
215 Ga0307411_10000301 3300032005 Bacteria 16473
216 Ga0307411_10188670 3300032005 Bacteria 1572
217 Ga0307507_10205769 3300033179 Bacteria 1352
218 Ga0373955_0106137 3300035172 Bacteria 1619
219 Ga0373931_0025102 3300035691 Bacteria 3026
220 Ga0373927_0211205 3300035695 Bacteria 1275
221 Ga0395899_0083964 3300037312 Bacteria 2315
222 Ga0395899_0176036 3300037312 Bacteria 1504
223 Ga0395900_0283352 3300037418 Bacteria 1648
224 Ga0395900_0472347 3300037418 Bacteria 1207
225 Ga0395898_0109117 3300037466 Bacteria 2653
226 Ga0395898_0353855 3300037466 Bacteria 1400
227 Ga0395898_0428119 3300037466 Bacteria 1261
228 Ga0395905_0004566 3300037471 Bacteria 14330
229 Ga0395905_0019714 3300037471 Bacteria 6393
230 Ga0395901_0054815 3300038443 Bacteria 4145
231 Ga0395901_0155286 3300038443 Bacteria 2403
232 Ga0395901_0251126 3300038443 Bacteria 1842
233 Ga0436361_0335187 3300039447 Bacteria 21707
234 Ga0439438_058667 3300041405 Bacteria 967
235 Ga0439439_0061632 3300041406 Bacteria 996
236 Ga0451789_0781843 3300041443 Bacteria 951
237 Ga0451851_0386052 3300041507 Bacteria 1225
238 Ga0439431_0004116 3300041997 Bacteria 3198
239 Ga0439449_0103655 3300042007 Bacteria 1052
240 Ga0439462_0050413 3300042015 Bacteria 1118
241 Ga0450896_033370 3300042133 Bacteria 785
242 Ga0450898_028294 3300042134 Bacteria 1018
243 Ga0439434_0093918 3300042435 Bacteria 961
244 Ga0450893_0005056 3300042532 Bacteria 2108
245 Ga0451577_0018286 3300042876 Bacteria 6458
246 Ga0453684_0092273 3300044712 Bacteria 3734
247 Ga0495590_0033925 3300046457 Bacteria 1783
248 Ga0495650_0036406 3300046471 Bacteria 2154
249 Ga0495605_0149867 3300046474 Bacteria 1041
250 Ga0495620_0057810 3300046515 Bacteria 1626
251 Ga0495632_0008154 3300046519 Bacteria 6475
252 Ga0495637_0199349 3300046520 Bacteria 736
253 Ga0495666_0093708 3300046526 Bacteria 1416
254 Ga0495597_0006623 3300046542 Bacteria 5973
255 Ga0495633_0001551 3300046558 Bacteria 17639
256 Ga0495668_0204382 3300046616 Bacteria 1081
257 Ga0495625_0510936 3300046660 Bacteria 733
258 Ga0495649_0024948 3300046694 Bacteria 3331
259 Ga0495660_0018696 3300046810 Bacteria 3981
260 Ga0495660_0050796 3300046810 Bacteria 2258
261 Ga0495676_0226824 3300047321 Bacteria 1285
262 Ga0495687_000473 3300047443 Bacteria 48762
263 Ga0495686_0003333 3300047472 Bacteria 14016
264 Ga0495614_0085668 3300048089 Bacteria 1368
265 Ga0496113_0322278 3300048916 Bacteria 1239
266 Ga0496114_0319967 3300048917 Bacteria 1371
267 Ga0496119_0152981 3300048922 Bacteria 1234
268 Ga0496123_0190567 3300048926 Bacteria 1061
269 Ga0496124_0115645 3300048927 Bacteria 2152
270 Ga0496125_0199401 3300048928 Bacteria 1312
271 Ga0501034_0817655 3300049571 Bacteria 824
272 Ga0501044_0311600 3300049823 Bacteria 1500
273 nmdc:mga03683_208774_c1 3300050489 Bacteria 898
274 nmdc:mga00v17_31521_c1 3300050491 Bacteria 1349
275 nmdc:mga00v17_61263_c1 3300050491 Bacteria 2312
276 nmdc:mga0yw44_161601_c1 3300050492 Bacteria 1466
277 nmdc:mga0yw44_81446_c1 3300050492 Bacteria 2029
278 nmdc:mga0k408_1296_c1 3300050493 Bacteria 13526
279 nmdc:mga0k408_16416_c1 3300050493 Bacteria 4109
280 nmdc:mga0k408_2812_c1 3300050493 Bacteria 9240
281 nmdc:mga0k408_36668_c1 3300050493 Bacteria 2815
282 nmdc:mga0k408_938_c1 3300050493 Bacteria 15986
283 nmdc:mga06z11_16986_c1 3300050494 Bacteria 3292
284 nmdc:mga07m45_12893_c1 3300050496 Bacteria 4423
285 nmdc:mga07m45_162549_c1 3300050496 Bacteria 1296
286 nmdc:mga07m45_1844_c1 3300050496 Bacteria 9789
287 nmdc:mga07m45_20006_c1 3300050496 Bacteria 3633
288 nmdc:mga07m45_464990_c1 3300050496 Bacteria 733
289 nmdc:mga05p37_1043646_c1 3300050507 Bacteria 863
290 nmdc:mga09592_49041_c1 3300050508 Bacteria 3560
291 nmdc:mga0qj67_40458_c1 3300050509 Bacteria 3663
292 nmdc:mga0sz30_43160_c1 3300050516 Bacteria 1898
293 Ga0500658_0001518 3300053134 Bacteria 9306
294 Ga0500568_0012266 3300053139 Bacteria 3948
295 Ga0500634_0064252 3300053161 Bacteria 1939
296 Ga0500645_000326 3300053730 Bacteria 33814
297 Ga0500645_010728 3300053730 Bacteria 3015
298 2511245615 2511231002 Bacteria 5042903
299 2548498873 2547132374 Bacteria 5530232
300 2643867928 2643221570 Bacteria 5103772
301 2643991793 2643221596 Bacteria 5006805
302 2644058964 2643221609 Bacteria 6756331
303 2644071191 2643221611 Bacteria 6820941
304 2644293537 2643221652 Bacteria 5140275
305 2644301142 2643221654 Bacteria 5273570
306 2644648334 2643221717 Bacteria 5676132
307 2722881054 2721755523 Bacteria 6430384
308 2739246219 2738543012 Bacteria 7115078
309 2739252119 2738543013 Bacteria 5618633
310 2816471403 2816332133 Bacteria 7249298
311 2894023359 2894023352 Bacteria 5167372
312 2928117035 2928115317 Bacteria 6477646
313 2932422898 2932422444 Bacteria 4678430
314 2974320160 2974320154 Bacteria 4571377
315 2990713705 2990710928 Bacteria 5002431
316 Ga0495625_0144607
317 JGI25159J45721_1000313
318 JGI25160J50197_1000226
319 JGI25161J50226_1000037
320 Ga0055537_1012004
321 Ga0055543_1000708
322 Ga0070676_10081008
323 Ga0070676_10135885
324 Ga0070676_10145160
325 Ga0070670_100003146
326 Ga0070670_100243278
327 Ga0070677_10025987
328 Ga0068869_100431668
329 Ga0068869_100635622
330 Ga0070666_10266978
331 Ga0070682_100237098
332 Ga0068868_100013231
333 Ga0068868_100096462
334 Ga0070668_100646974
335 Ga0070669_100005491
336 Ga0070675_100000072
337 Ga0070671_100052124
338 Ga0070671_100052922
339 Ga0070671_100077343
340 Ga0070671_100089016
341 Ga0070674_100003038
342 Ga0070674_100345687
343 Ga0070673_100000785
344 Ga0070667_100002744
345 Ga0070667_100087015
346 Ga0070667_100176069
347 Ga0070708_100041461
348 Ga0070708_100771621
349 Ga0070663_100370585
350 Ga0070678_100051454
351 Ga0070678_100151592
352 Ga0070678_100288999
353 Ga0070662_100013653
354 Ga0068867_100004430
355 Ga0068867_100074043
356 Ga0070706_100019794
357 Ga0070707_100233433
358 Ga0070698_100136072
359 Ga0070699_101053332
360 Ga0068853_100280148
361 Ga0068853_100453385
362 Ga0070672_100000977
363 Ga0070665_100026107
364 Ga0070665_100255977
365 Ga0070664_100138225
366 Ga0068854_100231506
367 Ga0068854_100264002
368 Ga0068852_100120263
369 Ga0068852_100229628
370 Ga0068852_100650957
371 Ga0068859_100080918
372 Ga0068859_100348973
373 Ga0068864_100035347
374 Ga0068863_100073456
375 Ga0075365_10110036
376 Ga0075363_100009229
377 Ga0075363_100015875
378 Ga0075363_100042049
379 Ga0075364_10010350
380 Ga0075364_10012194
381 Ga0075364_10157751
382 Ga0075432_10004249
383 Ga0075362_10006192
384 Ga0075362_10075168
385 Ga0075367_10078092
386 Ga0075366_10000620
387 Ga0075366_10004392
388 Ga0075366_10005472
389 Ga0075366_10026221
390 Ga0075366_10140746
391 Ga0075366_10197086
392 Ga0075370_10001318
393 Ga0075370_10002624
394 Ga0075370_10011701
395 Ga0075370_10029431
396 Ga0075370_10083176
397 Ga0075370_10091049
398 Ga0075430_100009079
399 Ga0075429_100011122
400 Ga0068865_100111590
401 Ga0097620_100080913
402 Ga0097620_100348950
403 Ga0079104_1000008
404 Ga0105250_10000327
405 Ga0105240_10004737
406 Ga0105240_10135401
407 Ga0105245_10141225
408 Ga0105247_10275995
409 Ga0114129_10057553
410 Ga0105243_10001757
411 Ga0105243_10169643
412 Ga0105241_10601315
413 Ga0105242_10072417
414 Ga0105242_10518742
415 Ga0105237_10000942
416 Ga0105237_10044079
417 Ga0105238_10118287
418 Ga0105239_10022455
419 Ga0105239_10162154
420 Ga0105246_10324395
421 Ga0157378_10788396
422 Ga0163162_10046052
423 Ga0163162_10539009
424 Ga0157375_10293016
425 Ga0157375_10875142
426 Ga0157380_10224707
427 Ga0157377_10271933
428 Ga0157379_10055550
429 Ga0157379_10083564
430 Ga0157379_10424023
431 Ga0157376_10652113
432 Ga0163161_10008480
433 Ga0213872_10002111
434 Ga0207425_1002758
435 Ga0209565_1000987
436 Ga0209130_1000202
437 Ga0209675_1007019
438 Ga0209025_1004445
439 Ga0209758_1003740
440 Ga0209050_1003769
441 Ga0207426_1000145
442 Ga0207696_1002515
443 Ga0207682_10002371
444 Ga0207688_10062851
445 Ga0207680_10122460
446 Ga0207645_10022552
447 Ga0207645_10424217
448 Ga0207643_10292521
449 Ga0207684_10032739
450 Ga0207695_10009307
451 Ga0207695_10132157
452 Ga0207671_10009182
453 Ga0207671_10146450
454 Ga0207681_10010823
455 Ga0207694_10851504
456 Ga0207650_10002045
457 Ga0207650_10132829
458 Ga0207659_10000081
459 Ga0207687_10113196
460 Ga0207644_10002484
461 Ga0207644_10037015
462 Ga0207644_10068186
463 Ga0207644_10264958
464 Ga0207706_10027336
465 Ga0207686_10021190
466 Ga0207709_10000070
467 Ga0207709_10232890
468 Ga0207709_10559506
469 Ga0207669_10026345
470 Ga0207669_10092380
471 Ga0207704_10164585
472 Ga0207691_10000330
473 Ga0207689_10079010
474 Ga0207689_10238685
475 Ga0207689_10517389
476 Ga0207689_10731237
477 Ga0207679_10269110
478 Ga0207651_10005928
479 Ga0207668_10199900
480 Ga0207668_10203966
481 Ga0207640_10036407
482 Ga0207658_10000701
483 Ga0207658_10138762
484 Ga0207658_10804468
485 Ga0207677_10050550
486 Ga0207677_10805455
487 Ga0207677_10880556
488 Ga0207703_10450177
489 Ga0207639_10028869
490 Ga0207639_10693847
491 Ga0207678_10064828
492 Ga0207648_10009629
493 Ga0207648_10098080
494 Ga0207648_10340143
495 Ga0207676_10154512
496 Ga0207676_10231738
497 Ga0207674_10014649
498 Ga0207683_10002618
499 Ga0207683_10015591
500 Ga0207698_10141665
501 Ga0207698_10728955
502 Ga0207698_10839647
503 Ga0209281_1000029
504 Ga0207428_10118389
505 Ga0268266_10079918
506 Ga0307517_10001182
507 Ga0307517_10125372
508 Ga0307517_10163925
509 Ga0307515_10449959
510 Ga0307513_10000015
511 Ga0307513_10058712
512 Ga0307513_10233523
513 Ga0307509_10054546
514 Ga0307509_10103497
515 Ga0307509_10237886
516 Ga0307408_100000221
517 Ga0307408_100016519
518 Ga0307508_10198480
519 Ga0307516_10095395
520 Ga0307405_10003016
521 Ga0307413_10029228
522 Ga0307410_10108635
523 Ga0307406_10001071
524 Ga0307406_10010909
525 Ga0307407_10159374
526 Ga0307412_10016817
527 Ga0307416_100017128
528 Ga0307416_100751071
529 Ga0307414_10007934
530 Ga0307411_10000301
531 Ga0307411_10188670
532 Ga0307507_10205769
533 Ga0373955_0106137
534 Ga0373931_0025102
535 Ga0373927_0211205
536 Ga0395899_0083964
537 Ga0395899_0176036
538 Ga0395900_0283352
539 Ga0395900_0472347
540 Ga0395898_0109117
541 Ga0395898_0353855
542 Ga0395898_0428119
543 Ga0395905_0004566
544 Ga0395905_0019714
545 Ga0395901_0054815
546 Ga0395901_0155286
547 Ga0395901_0251126
548 Ga0436361_0335187
549 Ga0439438_058667
550 Ga0439439_0061632
551 Ga0451789_0781843
552 Ga0451851_0386052
553 Ga0439431_0004116
554 Ga0439449_0103655
555 Ga0439462_0050413
556 Ga0450896_033370
557 Ga0450898_028294
558 Ga0439434_0093918
559 Ga0450893_0005056
560 Ga0451577_0018286
561 Ga0453684_0092273
562 Ga0495590_0033925
563 Ga0495650_0036406
564 Ga0495605_0149867
565 Ga0495620_0057810
566 Ga0495632_0008154
567 Ga0495637_0199349
568 Ga0495666_0093708
569 Ga0495597_0006623
570 Ga0495633_0001551
571 Ga0495668_0204382
572 Ga0495625_0510936
573 Ga0495649_0024948
574 Ga0495660_0018696
575 Ga0495660_0050796
576 Ga0495676_0226824
577 Ga0495687_000473
578 Ga0495686_0003333
579 Ga0495614_0085668
580 Ga0496113_0322278
581 Ga0496114_0319967
582 Ga0496119_0152981
583 Ga0496123_0190567
584 Ga0496124_0115645
585 Ga0496125_0199401
586 Ga0501034_0817655
587 Ga0501044_0311600
588 nmdc:mga03683_208774_c1
589 nmdc:mga00v17_31521_c1
590 nmdc:mga00v17_61263_c1
591 nmdc:mga0yw44_161601_c1
592 nmdc:mga0yw44_81446_c1
593 nmdc:mga0k408_1296_c1
594 nmdc:mga0k408_16416_c1
595 nmdc:mga0k408_2812_c1
596 nmdc:mga0k408_36668_c1
597 nmdc:mga0k408_938_c1
598 nmdc:mga06z11_16986_c1
599 nmdc:mga07m45_12893_c1
600 nmdc:mga07m45_162549_c1
601 nmdc:mga07m45_1844_c1
602 nmdc:mga07m45_20006_c1
603 nmdc:mga07m45_464990_c1
604 nmdc:mga05p37_1043646_c1
605 nmdc:mga09592_49041_c1
606 nmdc:mga0qj67_40458_c1
607 nmdc:mga0sz30_43160_c1
608 Ga0500658_0001518
609 Ga0500568_0012266
610 Ga0500634_0064252
611 Ga0500645_000326
612 Ga0500645_010728
613 2511245615
614 2548498873
615 2643867928
616 2643991793
617 2644058964
618 2644071191
619 2644293537
620 2644301142
621 2644648334
622 2722881054
623 2739246219
624 2739252119
625 2816471403
626 2894023359
627 2928117035
628 2932422898
629 2974320160
630 2990713705

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00392

GntR

Bacterial regulatory proteins, gntR family

3

65

0.98

PF07729

FCD

FCD domain

75

203

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
4r1h-assembly1.cif.gz_B gntr family transcriptional regulator from listeria monocytogenes 0.8958 5 69
5kvr-assembly1.cif.gz_A-2 x-ray crystal structure of a fragment (1-75) of a transcriptional regulator pdhr from escherichia coli cft073 0.8927 5 66
3bwg-assembly1.cif.gz_A the crystal structure of possible transcriptional regulator yydk from bacillus subtilis subsp. subtilis str. 168 0.8776 7 70
3bwg-assembly2.cif.gz_C-2 the crystal structure of possible transcriptional regulator yydk from bacillus subtilis subsp. subtilis str. 168 0.874 7 70
3bwg-assembly1.cif.gz_B the crystal structure of possible transcriptional regulator yydk from bacillus subtilis subsp. subtilis str. 168 0.8736 5 70
ID Description Score Start End Superfamily
3r61A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9746 27 56 1.10.10.10
3r61B01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9699 27 57 1.10.10.10
3sxyB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9534 6 68 1.10.10.10
af_Q79G00_16_82_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9527 5 66 1.10.10.10
af_P0ACL5_1_78_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9489 5 70 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A257GWK0-F1-model_v4 GntR family transcriptional regulator 0.9576 5 197 GO:0003677
GO:0003700
AF-A0A257GWK0-F1-model_v4 GntR family transcriptional regulator 0.9387 5 197 GO:0003677
GO:0003700
AF-A0A4Q5U732-F1-model_v4 deleted 0.9185 1 199
AF-A0A2D5IZZ6-F1-model_v4 HTH gntR-type domain-containing protein 0.9143 8 197 GO:0003677
GO:0003700
AF-A0A0P0Z599-F1-model_v4 GntR family transcriptional regulator 0.9069 2 209 GO:0003677
GO:0003700

Map