F402833

General Info

Members Datasets Scaffolds Average Seq Length
314 203 628 296

Family's Representative Sequence

Representative Sequence 3300046455|Ga0495603_0001696|Ga0495603_0001696_5132_6160
Length 342
Sequence MITFIDDHRHVYGVEPICRVLPIAPSTYYTHVARRTDPDLVPSRAQRDRMLKDEIRRVWEENFQVYGADKVWKQLKREGIVVARCTVERLMKLMGLRGVVRGKTVRTTVSDGSTPCPKDLVNRQFTAERPNALWVSDFTYVSSWQGFVYVAFIIDVFARRIVGWRVSSSARTDFVLDALEQALYERQPAQQDGLIHHSDRGVQYVSIRYTDRLVDAGIEPSVGSVGDSYDNALAETINGLYKAEVIHRLGPWRNLQAVEMATLEWVDWFNNRRLLGPIGDIPPAVNGDQNPTPDGGVDQKRETSRIFSAVSWFGYRWAVSGASEGARRASADAPDAACFTRG

Samples

Sample ID Description Type Environment
1 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
2 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
5 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
6 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
7 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
8 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
9 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
10 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
11 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
12 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
13 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
14 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
20 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
21 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
22 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
23 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
24 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
25 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
26 3300009982 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_189 metaG Metagenome Rhizosphere
27 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
28 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
29 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
30 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
31 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
32 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
33 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
34 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
35 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
36 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
38 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
40 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
41 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
42 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
43 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300027360 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes) (version 2) Metagenome Rhizosphere
50 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
51 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
53 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
54 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
55 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
56 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
57 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
58 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
59 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
60 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
61 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
62 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
63 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
64 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
65 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
66 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
67 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
68 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
69 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
70 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
71 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
72 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
73 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
74 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
75 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
76 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
77 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
78 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
79 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
80 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
81 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
82 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
83 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
84 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
85 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
86 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
87 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
88 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
89 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
90 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
91 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
92 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
93 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
94 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
95 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
96 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
97 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
98 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
99 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
100 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
101 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
102 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
103 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
104 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
105 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
106 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
107 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
108 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
109 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
110 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
111 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
112 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
113 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
114 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
115 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
116 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
117 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
118 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
119 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
120 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
121 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
122 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
123 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
124 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
125 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
126 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
127 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
128 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
129 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
130 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
131 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
132 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
133 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
134 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
135 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
136 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
137 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
138 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
139 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
140 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
141 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
142 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
143 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
144 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
145 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
146 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
147 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
148 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
149 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
150 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
151 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
162 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
166 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
167 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
168 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
169 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
170 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
171 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
172 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
173 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
174 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
175 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
176 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
177 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
178 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
179 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
180 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
181 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
182 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
183 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
184 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
185 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
186 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
187 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
188 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
189 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
190 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
191 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
192 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
193 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
194 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
195 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
196 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
197 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
198 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
199 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
200 2513237082 Paraburkholderia mimosarum STM3621 Isolate Nodule
201 2513237083 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
202 2919100787 Rhizobium sp. 1399 Isolate Rhizosphere
203 2945945610 Variovorax paradoxus W1I18 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.73
Metatranscriptomes 0
Isolates 1.27

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.96
Nodule 0.64
Rhizoplane 2.55
Rhizosphere 84.08
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495603_0001696 3300046455 Bacteria 12958
2 JGI24737J22298_10035209 3300001990 Bacteria 1549
3 rootL2_10030519 3300003322 Bacteria 2592
4 JGI25407J50210_10033307 3300003373 Bacteria 1330
5 Ga0055527_1003496 3300003760 Bacteria 2319
6 Ga0055527_1004283 3300003760 Bacteria 1982
7 Ga0055535_1012210 3300003761 Bacteria 1321
8 Ga0055542_1014139 3300003762 Bacteria 1321
9 Ga0055529_1002698 3300003763 Bacteria 3267
10 Ga0055524_1033282 3300003775 Bacteria 1445
11 Ga0055524_1034368 3300003775 Bacteria 1403
12 Ga0070658_10228634 3300005327 Bacteria 1575
13 Ga0070670_100267647 3300005331 Bacteria 1491
14 Ga0070680_100045866 3300005336 Bacteria 3554
15 Ga0070682_100228837 3300005337 Bacteria 1328
16 Ga0070668_100421424 3300005347 Bacteria 1143
17 Ga0070681_10016213 3300005458 Bacteria 7431
18 Ga0070681_10514706 3300005458 Bacteria 1110
19 Ga0070679_100090846 3300005530 Bacteria 3041
20 Ga0070693_100126809 3300005547 Bacteria 1590
21 Ga0070693_100178710 3300005547 Bacteria 1365
22 Ga0070665_100313504 3300005548 Bacteria 1573
23 Ga0068852_100006949 3300005616 Bacteria 8236
24 Ga0075369_10058638 3300006186 Bacteria 1676
25 Ga0075428_100265092 3300006844 Bacteria 1849
26 Ga0075428_100518661 3300006844 Bacteria 1275
27 Ga0075431_100108398 3300006847 Bacteria 2866
28 Ga0075431_100197866 3300006847 Bacteria 2057
29 Ga0075431_100401048 3300006847 Bacteria 1372
30 Ga0075429_100290117 3300006880 Bacteria 1432
31 Ga0099794_10191101 3300007265 Bacteria 1047
32 Ga0105240_10449383 3300009093 Bacteria 1442
33 Ga0105147_102794 3300009982 Bacteria 1448
34 Ga0157373_10104420 3300013100 Bacteria 1993
35 Ga0157370_10112047 3300013104 Bacteria 2550
36 Ga0157370_10167626 3300013104 Bacteria 2042
37 Ga0157369_10268621 3300013105 Bacteria 1778
38 Ga0157374_10113258 3300013296 Bacteria 2611
39 Ga0157372_10079763 3300013307 Bacteria 3703
40 Ga0182008_10094502 3300014497 Bacteria 1475
41 Ga0213872_10022478 3300021361 Bacteria 2904
42 Ga0209672_100705 3300025228 Bacteria 16645
43 Ga0209258_100217 3300025242 Bacteria 110607
44 Ga0209148_1015634 3300025254 Bacteria 1321
45 Ga0209129_1000153 3300025258 Bacteria 110699
46 Ga0209455_1018478 3300025272 Bacteria 1431
47 Ga0209673_1005792 3300025273 Bacteria 6142
48 Ga0209758_1000153 3300025297 Bacteria 161668
49 Ga0209256_1018518 3300025299 Bacteria 2258
50 Ga0207426_1000776 3300025302 Bacteria 35107
51 Ga0207647_10159181 3300025904 Bacteria 1318
52 Ga0207705_10170663 3300025909 Bacteria 1638
53 Ga0207707_10012429 3300025912 Bacteria 7401
54 Ga0207707_10228670 3300025912 Bacteria 1618
55 Ga0207660_10037726 3300025917 Bacteria 3370
56 Ga0207652_10100645 3300025921 Bacteria 2552
57 Ga0207668_10220209 3300025972 Bacteria 1523
58 Ga0209969_1008097 3300027360 Bacteria 1489
59 Ga0209974_10031772 3300027876 Bacteria 1749
60 Ga0268266_10314238 3300028379 Bacteria 1464
61 Ga0268266_10618583 3300028379 Bacteria 1041
62 Ga0316177_1030257 3300030731 Bacteria 1922
63 Ga0316176_1139327 3300030732 Bacteria 2143
64 Ga0316176_1151895 3300030732 Bacteria 1526
65 Ga0314311_1195596 3300030733 Bacteria 1566
66 Ga0316183_1012464 3300030742 Bacteria 2093
67 Ga0316183_1214833 3300030742 Bacteria 2069
68 Ga0316181_1032716 3300030744 Bacteria 1297
69 Ga0316181_1096699 3300030744 Bacteria 1755
70 Ga0316182_1214342 3300030745 Bacteria 1228
71 Ga0316182_1271909 3300030745 Bacteria 1407
72 Ga0307509_10217015 3300031507 Bacteria 1730
73 Ga0316575_10021029 3300031665 Bacteria 2507
74 Ga0307414_10332820 3300032004 Bacteria 1297
75 Ga0316574_0019973 3300035398 Bacteria 3960
76 Ga0316574_0222585 3300035398 Bacteria 1209
77 Ga0316582_0263237 3300036647 Bacteria 1182
78 Ga0316584_0309327 3300036712 Bacteria 1142
79 Ga0395899_0239437 3300037312 Bacteria 1249
80 Ga0395898_0000295 3300037466 Bacteria 119771
81 Ga0395898_0005341 3300037466 Bacteria 13890
82 Ga0395905_0261755 3300037471 Bacteria 1615
83 Ga0395905_0299472 3300037471 Bacteria 1495
84 Ga0395905_0314317 3300037471 Bacteria 1455
85 Ga0395901_0556677 3300038443 Bacteria 1162
86 Ga0400491_09399 3300038727 Bacteria 1465
87 Ga0436361_0150954 3300039447 Bacteria 12640
88 Ga0436361_0700576 3300039447 Bacteria 1177
89 Ga0439461_0029828 3300041410 Bacteria 1131
90 Ga0439465_0000828 3300041413 Bacteria 9727
91 Ga0439465_0014196 3300041413 Bacteria 2482
92 Ga0451807_1118741 3300041486 Bacteria 1233
93 Ga0451853_2548193 3300041512 Bacteria 1638
94 Ga0439448_0047814 3300042005 Bacteria 1396
95 Ga0439458_0018513 3300042157 Bacteria 1597
96 Ga0466972_0030241 3300044658 Bacteria 2666
97 Ga0466965_0040480 3300044683 Bacteria 2294
98 Ga0466965_0049587 3300044683 Bacteria 2081
99 Ga0466965_0079709 3300044683 Bacteria 1654
100 Ga0466965_0101789 3300044683 Bacteria 1469
101 Ga0466966_0034462 3300044684 Bacteria 3272
102 Ga0466961_0165348 3300044693 Bacteria 1377
103 Ga0466963_0169780 3300044694 Bacteria 1520
104 Ga0466971_0035208 3300044719 Bacteria 2244
105 Ga0466968_0017030 3300044735 Bacteria 2899
106 Ga0466970_0054252 3300044765 Bacteria 2140
107 Ga0466970_0080470 3300044765 Bacteria 1760
108 Ga0466970_0094059 3300044765 Bacteria 1628
109 Ga0466957_0000004 3300044842 Bacteria 106395
110 Ga0466957_0096358 3300044842 Bacteria 1859
111 Ga0466959_0154661 3300045049 Bacteria 1614
112 Ga0451576_0003069 3300045051 Bacteria 23481
113 Ga0451576_0223629 3300045051 Bacteria 1965
114 Ga0495590_0055963 3300046457 Bacteria 1378
115 Ga0495651_0183422 3300046462 Bacteria 1479
116 Ga0495639_0081542 3300046475 Bacteria 1507
117 Ga0495584_0019586 3300046491 Bacteria 3437
118 Ga0495584_0042484 3300046491 Bacteria 2294
119 Ga0495584_0131669 3300046491 Bacteria 1269
120 Ga0495584_0148581 3300046491 Bacteria 1190
121 Ga0495585_0005225 3300046492 Bacteria 8228
122 Ga0495596_0004828 3300046500 Bacteria 6477
123 Ga0495607_0104826 3300046501 Bacteria 1508
124 Ga0495583_0102599 3300046506 Bacteria 1219
125 Ga0495606_0080587 3300046507 Bacteria 2025
126 Ga0495606_0196578 3300046507 Bacteria 1152
127 Ga0495608_0110373 3300046511 Bacteria 1768
128 Ga0495616_0017198 3300046513 Bacteria 3990
129 Ga0495616_0033661 3300046513 Bacteria 2667
130 Ga0495618_0107169 3300046514 Bacteria 1789
131 Ga0495618_0129669 3300046514 Bacteria 1613
132 Ga0495628_0124627 3300046516 Bacteria 1974
133 Ga0495628_0250818 3300046516 Bacteria 1321
134 Ga0495632_0107090 3300046519 Bacteria 1314
135 Ga0495648_0001074 3300046524 Bacteria 27766
136 Ga0495648_0081312 3300046524 Bacteria 1843
137 Ga0495666_0075775 3300046526 Bacteria 1594
138 Ga0495642_0000655 3300046528 Bacteria 17331
139 Ga0495642_0030353 3300046528 Bacteria 2162
140 Ga0495652_0094872 3300046529 Bacteria 2432
141 Ga0495665_0095002 3300046531 Bacteria 1565
142 Ga0495640_0214247 3300046533 Bacteria 1216
143 Ga0495587_0116344 3300046536 Bacteria 1533
144 Ga0495598_0074332 3300046537 Bacteria 1077
145 Ga0495597_0108663 3300046542 Bacteria 1164
146 Ga0495633_0002860 3300046558 Bacteria 11846
147 Ga0495667_0030036 3300046559 Bacteria 3654
148 Ga0495656_0007815 3300046615 Bacteria 3797
149 Ga0495634_0244527 3300046642 Bacteria 1099
150 Ga0495611_0109653 3300046648 Bacteria 1284
151 Ga0495625_0036143 3300046660 Bacteria 3633
152 Ga0495625_0140525 3300046660 Bacteria 1629
153 Ga0495635_0147520 3300046663 Bacteria 1601
154 Ga0495661_0020763 3300046665 Bacteria 4283
155 Ga0495599_0094483 3300046678 Bacteria 1865
156 Ga0495669_0007236 3300046684 Bacteria 4649
157 Ga0495613_0336321 3300046689 Bacteria 1039
158 Ga0495670_0100618 3300046691 Bacteria 1488
159 Ga0495671_0093903 3300046692 Bacteria 1468
160 Ga0495671_0103797 3300046692 Bacteria 1388
161 Ga0495589_0058955 3300046794 Bacteria 1887
162 Ga0495589_0120027 3300046794 Bacteria 1266
163 Ga0495600_0027303 3300046809 Bacteria 3688
164 Ga0495600_0159936 3300046809 Bacteria 1456
165 Ga0495581_0102336 3300047315 Bacteria 1664
166 Ga0495674_0217310 3300047319 Bacteria 1581
167 Ga0495672_0012514 3300047320 Bacteria 5917
168 Ga0495680_0175892 3300047322 Bacteria 1548
169 Ga0495683_0108328 3300047323 Bacteria 1328
170 Ga0495677_0023691 3300047445 Bacteria 2227
171 Ga0495677_0062008 3300047445 Bacteria 1387
172 Ga0495685_046349 3300047447 Bacteria 1479
173 Ga0495673_0010616 3300047469 Bacteria 4997
174 Ga0495684_0220217 3300047471 Bacteria 1392
175 Ga0495686_0109211 3300047472 Bacteria 1660
176 Ga0495626_0000775 3300048091 Bacteria 29175
177 Ga0496100_0158302 3300048903 Bacteria 1621
178 Ga0496101_0245711 3300048904 Bacteria 1393
179 Ga0496104_0198990 3300048907 Bacteria 1916
180 Ga0496104_0299058 3300048907 Bacteria 1521
181 Ga0496105_0049250 3300048908 Bacteria 3478
182 Ga0496106_0226244 3300048909 Bacteria 1492
183 Ga0496109_0330824 3300048912 Bacteria 1438
184 Ga0496116_0105955 3300048919 Bacteria 1666
185 Ga0496117_0001902 3300048920 Bacteria 28009
186 Ga0496117_0112526 3300048920 Bacteria 1692
187 Ga0496118_0104923 3300048921 Bacteria 1896
188 Ga0496118_0128076 3300048921 Bacteria 1636
189 Ga0496121_0047255 3300048924 Bacteria 3674
190 Ga0496121_0189217 3300048924 Bacteria 1477
191 Ga0496123_0056017 3300048926 Bacteria 2581
192 Ga0496124_0045734 3300048927 Bacteria 3752
193 Ga0496124_0089025 3300048927 Bacteria 2521
194 Ga0496125_0073768 3300048928 Bacteria 2650
195 Ga0495678_037735 3300049459 Bacteria 1960
196 Ga0495682_0014380 3300049460 Bacteria 3002
197 Ga0495682_0101851 3300049460 Bacteria 1030
198 Ga0501031_0125719 3300049568 Bacteria 1675
199 Ga0501032_0123259 3300049569 Bacteria 1713
200 Ga0501032_0158660 3300049569 Bacteria 1485
201 Ga0501032_0223062 3300049569 Bacteria 1226
202 Ga0501033_0073649 3300049570 Bacteria 2507
203 Ga0501033_0174215 3300049570 Bacteria 1544
204 Ga0501033_0192242 3300049570 Bacteria 1460
205 Ga0501034_0085197 3300049571 Bacteria 3162
206 Ga0501036_0210598 3300049572 Bacteria 1633
207 Ga0501036_0425146 3300049572 Bacteria 1107
208 Ga0501037_0125939 3300049573 Bacteria 1839
209 Ga0501037_0126864 3300049573 Bacteria 1831
210 Ga0501037_0199544 3300049573 Bacteria 1414
211 Ga0501038_0160617 3300049574 Bacteria 1826
212 Ga0501038_0244805 3300049574 Bacteria 1422
213 Ga0501038_0354815 3300049574 Bacteria 1141
214 Ga0501038_0409978 3300049574 Bacteria 1047
215 Ga0501039_0194984 3300049575 Bacteria 1592
216 Ga0501039_0229766 3300049575 Bacteria 1458
217 Ga0501040_0195548 3300049576 Bacteria 1435
218 Ga0501040_0222680 3300049576 Bacteria 1342
219 Ga0501041_0138249 3300049577 Bacteria 1518
220 Ga0501041_0166740 3300049577 Bacteria 1378
221 Ga0501041_0171516 3300049577 Bacteria 1357
222 Ga0501042_0058449 3300049578 Bacteria 2752
223 Ga0501042_0086784 3300049578 Bacteria 2244
224 Ga0501042_0224909 3300049578 Bacteria 1353
225 Ga0501043_0180050 3300049579 Bacteria 1647
226 Ga0501043_0211118 3300049579 Bacteria 1504
227 Ga0501046_0105156 3300049580 Bacteria 2162
228 Ga0501046_0179777 3300049580 Bacteria 1582
229 Ga0501046_0190644 3300049580 Bacteria 1529
230 Ga0501046_0198050 3300049580 Bacteria 1495
231 Ga0501047_0151890 3300049581 Bacteria 2191
232 Ga0501047_0168025 3300049581 Bacteria 2063
233 Ga0501047_0221025 3300049581 Bacteria 1750
234 Ga0501047_0301896 3300049581 Bacteria 1443
235 Ga0501048_0059838 3300049582 Bacteria 2699
236 Ga0501048_0076302 3300049582 Bacteria 2365
237 Ga0501048_0198078 3300049582 Bacteria 1423
238 Ga0501048_0207371 3300049582 Bacteria 1390
239 Ga0501048_0246650 3300049582 Bacteria 1267
240 Ga0501070_0060052 3300049586 Bacteria 3152
241 Ga0501070_0073532 3300049586 Bacteria 2828
242 Ga0501070_0154637 3300049586 Bacteria 1891
243 Ga0501070_0218269 3300049586 Bacteria 1564
244 Ga0501071_0150224 3300049587 Bacteria 1737
245 Ga0501071_0182260 3300049587 Bacteria 1573
246 Ga0501071_0267627 3300049587 Bacteria 1291
247 Ga0501072_0164301 3300049588 Bacteria 1771
248 Ga0501072_0284127 3300049588 Bacteria 1316
249 Ga0501073_0087082 3300049589 Bacteria 2172
250 Ga0501073_0219191 3300049589 Bacteria 1314
251 Ga0501074_0067156 3300049590 Bacteria 2579
252 Ga0501074_0109897 3300049590 Bacteria 1972
253 Ga0501074_0198935 3300049590 Bacteria 1428
254 Ga0501075_0107329 3300049591 Bacteria 2122
255 Ga0501075_0129344 3300049591 Bacteria 1923
256 Ga0501076_0191817 3300049592 Bacteria 1667
257 Ga0501076_0265389 3300049592 Bacteria 1406
258 Ga0501076_0364862 3300049592 Bacteria 1186
259 Ga0501077_0162394 3300049593 Bacteria 1418
260 Ga0501079_0216090 3300049741 Bacteria 1498
261 Ga0501079_0223127 3300049741 Bacteria 1472
262 Ga0501080_0117488 3300049742 Bacteria 2465
263 Ga0501080_0144076 3300049742 Bacteria 2202
264 Ga0501080_0308827 3300049742 Bacteria 1433
265 Ga0501080_0480506 3300049742 Bacteria 1111
266 Ga0501081_0045203 3300049743 Bacteria 3023
267 Ga0501081_0176198 3300049743 Bacteria 1545
268 Ga0501081_0238367 3300049743 Bacteria 1326
269 Ga0501081_0534005 3300049743 Bacteria 875
270 Ga0501083_0138083 3300049744 Bacteria 1596
271 Ga0501083_0181459 3300049744 Bacteria 1374
272 Ga0501280_000688 3300049776 Bacteria 7468
273 Ga0501035_0101177 3300049822 Bacteria 2529
274 Ga0501035_0160053 3300049822 Bacteria 1949
275 Ga0501035_0186643 3300049822 Bacteria 1784
276 Ga0501035_0240094 3300049822 Bacteria 1541
277 Ga0501044_0010385 3300049823 Bacteria 10102
278 Ga0501044_0123838 3300049823 Bacteria 2583
279 Ga0501044_0278623 3300049823 Bacteria 1606
280 Ga0501044_0344210 3300049823 Bacteria 1411
281 Ga0501044_0372428 3300049823 Bacteria 1344
282 Ga0501044_0408102 3300049823 Bacteria 1270
283 Ga0501044_0464109 3300049823 Bacteria 1171
284 Ga0501045_0077493 3300049824 Bacteria 2449
285 Ga0501045_0103896 3300049824 Bacteria 2104
286 nmdc:mga0k408_154246_c1 3300050493 Bacteria 1368
287 nmdc:mga06r32_14659_c1 3300050510 Bacteria 7114
288 nmdc:mga06r32_20765_c1 3300050510 Bacteria 6050
289 nmdc:mga06r32_387121_c1 3300050510 Bacteria 1381
290 nmdc:mga0rr50_149603_c1 3300050513 Bacteria 1885
291 nmdc:mga0sz30_90132_c1 3300050516 Bacteria 1334
292 Ga0495601_0180118 3300053077 Bacteria 1382
293 Ga0500646_0026340 3300053090 Bacteria 1576
294 Ga0500646_0029122 3300053090 Bacteria 1510
295 Ga0500647_0118380 3300053091 Bacteria 1254
296 Ga0500555_026032 3300053103 Bacteria 1672
297 Ga0500652_090532 3300053131 Bacteria 1277
298 Ga0500561_0030795 3300053137 Bacteria 1350
299 Ga0501084_0269849 3300054114 Bacteria 1436
300 Ga0501084_0297713 3300054114 Bacteria 1362
301 Ga0590071_012577 3300059421 Bacteria 1982
302 Ga0590074_007337 3300059423 Bacteria 1832
303 Ga0590075_004163 3300059424 Bacteria 3422
304 Ga0590077_009452 3300059426 Bacteria 1999
305 Ga0501082_0249260 3300060353 Bacteria 1545
306 Ga0501082_0263784 3300060353 Bacteria 1498
307 Ga0501082_0269236 3300060353 Bacteria 1482
308 Ga0466962_0045891 3300061719 Bacteria 2088
309 Ga0466962_0102232 3300061719 Bacteria 1376
310 Ga0530510_0075048 3300061734 Bacteria 2455
311 2513558662 2513237082 Bacteria 8640282
312 2513567296 2513237083 Bacteria 8410967
313 2919105018 2919100787 Bacteria 7710546
314 2945947853 2945945610 Bacteria 5951079
315 Ga0495603_0001696
316 JGI24737J22298_10035209
317 rootL2_10030519
318 JGI25407J50210_10033307
319 Ga0055527_1003496
320 Ga0055527_1004283
321 Ga0055535_1012210
322 Ga0055542_1014139
323 Ga0055529_1002698
324 Ga0055524_1033282
325 Ga0055524_1034368
326 Ga0070658_10228634
327 Ga0070670_100267647
328 Ga0070680_100045866
329 Ga0070682_100228837
330 Ga0070668_100421424
331 Ga0070681_10016213
332 Ga0070681_10514706
333 Ga0070679_100090846
334 Ga0070693_100126809
335 Ga0070693_100178710
336 Ga0070665_100313504
337 Ga0068852_100006949
338 Ga0075369_10058638
339 Ga0075428_100265092
340 Ga0075428_100518661
341 Ga0075431_100108398
342 Ga0075431_100197866
343 Ga0075431_100401048
344 Ga0075429_100290117
345 Ga0099794_10191101
346 Ga0105240_10449383
347 Ga0105147_102794
348 Ga0157373_10104420
349 Ga0157370_10112047
350 Ga0157370_10167626
351 Ga0157369_10268621
352 Ga0157374_10113258
353 Ga0157372_10079763
354 Ga0182008_10094502
355 Ga0213872_10022478
356 Ga0209672_100705
357 Ga0209258_100217
358 Ga0209148_1015634
359 Ga0209129_1000153
360 Ga0209455_1018478
361 Ga0209673_1005792
362 Ga0209758_1000153
363 Ga0209256_1018518
364 Ga0207426_1000776
365 Ga0207647_10159181
366 Ga0207705_10170663
367 Ga0207707_10012429
368 Ga0207707_10228670
369 Ga0207660_10037726
370 Ga0207652_10100645
371 Ga0207668_10220209
372 Ga0209969_1008097
373 Ga0209974_10031772
374 Ga0268266_10314238
375 Ga0268266_10618583
376 Ga0316177_1030257
377 Ga0316176_1139327
378 Ga0316176_1151895
379 Ga0314311_1195596
380 Ga0316183_1012464
381 Ga0316183_1214833
382 Ga0316181_1032716
383 Ga0316181_1096699
384 Ga0316182_1214342
385 Ga0316182_1271909
386 Ga0307509_10217015
387 Ga0316575_10021029
388 Ga0307414_10332820
389 Ga0316574_0019973
390 Ga0316574_0222585
391 Ga0316582_0263237
392 Ga0316584_0309327
393 Ga0395899_0239437
394 Ga0395898_0000295
395 Ga0395898_0005341
396 Ga0395905_0261755
397 Ga0395905_0299472
398 Ga0395905_0314317
399 Ga0395901_0556677
400 Ga0400491_09399
401 Ga0436361_0150954
402 Ga0436361_0700576
403 Ga0439461_0029828
404 Ga0439465_0000828
405 Ga0439465_0014196
406 Ga0451807_1118741
407 Ga0451853_2548193
408 Ga0439448_0047814
409 Ga0439458_0018513
410 Ga0466972_0030241
411 Ga0466965_0040480
412 Ga0466965_0049587
413 Ga0466965_0079709
414 Ga0466965_0101789
415 Ga0466966_0034462
416 Ga0466961_0165348
417 Ga0466963_0169780
418 Ga0466971_0035208
419 Ga0466968_0017030
420 Ga0466970_0054252
421 Ga0466970_0080470
422 Ga0466970_0094059
423 Ga0466957_0000004
424 Ga0466957_0096358
425 Ga0466959_0154661
426 Ga0451576_0003069
427 Ga0451576_0223629
428 Ga0495590_0055963
429 Ga0495651_0183422
430 Ga0495639_0081542
431 Ga0495584_0019586
432 Ga0495584_0042484
433 Ga0495584_0131669
434 Ga0495584_0148581
435 Ga0495585_0005225
436 Ga0495596_0004828
437 Ga0495607_0104826
438 Ga0495583_0102599
439 Ga0495606_0080587
440 Ga0495606_0196578
441 Ga0495608_0110373
442 Ga0495616_0017198
443 Ga0495616_0033661
444 Ga0495618_0107169
445 Ga0495618_0129669
446 Ga0495628_0124627
447 Ga0495628_0250818
448 Ga0495632_0107090
449 Ga0495648_0001074
450 Ga0495648_0081312
451 Ga0495666_0075775
452 Ga0495642_0000655
453 Ga0495642_0030353
454 Ga0495652_0094872
455 Ga0495665_0095002
456 Ga0495640_0214247
457 Ga0495587_0116344
458 Ga0495598_0074332
459 Ga0495597_0108663
460 Ga0495633_0002860
461 Ga0495667_0030036
462 Ga0495656_0007815
463 Ga0495634_0244527
464 Ga0495611_0109653
465 Ga0495625_0036143
466 Ga0495625_0140525
467 Ga0495635_0147520
468 Ga0495661_0020763
469 Ga0495599_0094483
470 Ga0495669_0007236
471 Ga0495613_0336321
472 Ga0495670_0100618
473 Ga0495671_0093903
474 Ga0495671_0103797
475 Ga0495589_0058955
476 Ga0495589_0120027
477 Ga0495600_0027303
478 Ga0495600_0159936
479 Ga0495581_0102336
480 Ga0495674_0217310
481 Ga0495672_0012514
482 Ga0495680_0175892
483 Ga0495683_0108328
484 Ga0495677_0023691
485 Ga0495677_0062008
486 Ga0495685_046349
487 Ga0495673_0010616
488 Ga0495684_0220217
489 Ga0495686_0109211
490 Ga0495626_0000775
491 Ga0496100_0158302
492 Ga0496101_0245711
493 Ga0496104_0198990
494 Ga0496104_0299058
495 Ga0496105_0049250
496 Ga0496106_0226244
497 Ga0496109_0330824
498 Ga0496116_0105955
499 Ga0496117_0001902
500 Ga0496117_0112526
501 Ga0496118_0104923
502 Ga0496118_0128076
503 Ga0496121_0047255
504 Ga0496121_0189217
505 Ga0496123_0056017
506 Ga0496124_0045734
507 Ga0496124_0089025
508 Ga0496125_0073768
509 Ga0495678_037735
510 Ga0495682_0014380
511 Ga0495682_0101851
512 Ga0501031_0125719
513 Ga0501032_0123259
514 Ga0501032_0158660
515 Ga0501032_0223062
516 Ga0501033_0073649
517 Ga0501033_0174215
518 Ga0501033_0192242
519 Ga0501034_0085197
520 Ga0501036_0210598
521 Ga0501036_0425146
522 Ga0501037_0125939
523 Ga0501037_0126864
524 Ga0501037_0199544
525 Ga0501038_0160617
526 Ga0501038_0244805
527 Ga0501038_0354815
528 Ga0501038_0409978
529 Ga0501039_0194984
530 Ga0501039_0229766
531 Ga0501040_0195548
532 Ga0501040_0222680
533 Ga0501041_0138249
534 Ga0501041_0166740
535 Ga0501041_0171516
536 Ga0501042_0058449
537 Ga0501042_0086784
538 Ga0501042_0224909
539 Ga0501043_0180050
540 Ga0501043_0211118
541 Ga0501046_0105156
542 Ga0501046_0179777
543 Ga0501046_0190644
544 Ga0501046_0198050
545 Ga0501047_0151890
546 Ga0501047_0168025
547 Ga0501047_0221025
548 Ga0501047_0301896
549 Ga0501048_0059838
550 Ga0501048_0076302
551 Ga0501048_0198078
552 Ga0501048_0207371
553 Ga0501048_0246650
554 Ga0501070_0060052
555 Ga0501070_0073532
556 Ga0501070_0154637
557 Ga0501070_0218269
558 Ga0501071_0150224
559 Ga0501071_0182260
560 Ga0501071_0267627
561 Ga0501072_0164301
562 Ga0501072_0284127
563 Ga0501073_0087082
564 Ga0501073_0219191
565 Ga0501074_0067156
566 Ga0501074_0109897
567 Ga0501074_0198935
568 Ga0501075_0107329
569 Ga0501075_0129344
570 Ga0501076_0191817
571 Ga0501076_0265389
572 Ga0501076_0364862
573 Ga0501077_0162394
574 Ga0501079_0216090
575 Ga0501079_0223127
576 Ga0501080_0117488
577 Ga0501080_0144076
578 Ga0501080_0308827
579 Ga0501080_0480506
580 Ga0501081_0045203
581 Ga0501081_0176198
582 Ga0501081_0238367
583 Ga0501081_0534005
584 Ga0501083_0138083
585 Ga0501083_0181459
586 Ga0501280_000688
587 Ga0501035_0101177
588 Ga0501035_0160053
589 Ga0501035_0186643
590 Ga0501035_0240094
591 Ga0501044_0010385
592 Ga0501044_0123838
593 Ga0501044_0278623
594 Ga0501044_0344210
595 Ga0501044_0372428
596 Ga0501044_0408102
597 Ga0501044_0464109
598 Ga0501045_0077493
599 Ga0501045_0103896
600 nmdc:mga0k408_154246_c1
601 nmdc:mga06r32_14659_c1
602 nmdc:mga06r32_20765_c1
603 nmdc:mga06r32_387121_c1
604 nmdc:mga0rr50_149603_c1
605 nmdc:mga0sz30_90132_c1
606 Ga0495601_0180118
607 Ga0500646_0026340
608 Ga0500646_0029122
609 Ga0500647_0118380
610 Ga0500555_026032
611 Ga0500652_090532
612 Ga0500561_0030795
613 Ga0501084_0269849
614 Ga0501084_0297713
615 Ga0590071_012577
616 Ga0590074_007337
617 Ga0590075_004163
618 Ga0590077_009452
619 Ga0501082_0249260
620 Ga0501082_0263784
621 Ga0501082_0269236
622 Ga0466962_0045891
623 Ga0466962_0102232
624 Ga0530510_0075048
625 2513558662
626 2513567296
627 2919105018
628 2945947853

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00665

rve

Integrase core domain

127

228

0.97

PF13683

rve_3

Integrase core domain

216

283

0.93

PF13276

HTH_21

HTH-like domain

45

104

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
1mzb-assembly1.cif.gz_A ferric uptake regulator 0.9006 33 73
2o03-assembly1.cif.gz_A-2 crystal structure of furb from m. tuberculosis- a zinc uptake regulator 0.8806 27 75
6qbv-assembly2.cif.gz_D structure of the htlv-2 integrase catalytic core domain in complex with magnesium (dimeric form) 0.8539 110 268
6qbt-assembly1.cif.gz_A structure of the htlv-2 integrase catalytic core domain in complex with magnesium (trimeric form) 0.8485 107 268
6qbv-assembly1.cif.gz_B structure of the htlv-2 integrase catalytic core domain in complex with magnesium (dimeric form) 0.8437 109 268
ID Description Score Start End Superfamily
af_P9WKH9_102_261_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.9499 108 264 3.30.420.10
af_P0CF80_124_283_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.9459 108 268 3.30.420.10
af_P0CF80_124_283_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.9345 108 268 3.30.420.10
af_P19769_115_278_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.9281 105 270 3.30.420.10
af_P9WKH9_102_261_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.9268 108 264 3.30.420.10
ID Description Score Start End GO Terms
AF-A0A2S7JS23-F1-model_v4 IS3 family transposase 0.9715 111 285 GO:0003676
GO:0015074
GO:0016020
AF-A0A2S1PJS8-F1-model_v4 Transposase 0.9709 32 276 GO:0003676
GO:0015074
AF-A0A2W7ZK15-F1-model_v4 IS3 family transposase 0.9701 111 241 GO:0003676
GO:0015074
GO:0016020
AF-A0A2W7JYC2-F1-model_v4 deleted 0.9686 133 280
AF-A0A2S7JS23-F1-model_v4 IS3 family transposase 0.9661 111 285 GO:0003676
GO:0015074
GO:0016020

Map