F396231

General Info

Members Datasets Scaffolds Average Seq Length
301 174 259 259

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2931380184|2931381995
Length 277
Sequence PDIALRYARASLPRGMTMAKLKRKEYDELLQPLQLELTAMARWVQHSGQRLLVLFEGRDTAGKGGAIQAISQHLNPRQCRVVALPKPTDREATQWYFQRYATHLPAAGEIVLMDRSWYNRAGVEWVMGYCSETEYQQFLHQAPVFEQLLVDDGILLFKYWLCVDQEQQEKRFAERHLDPLKGWKLSPVDLKSRSKYSAYTEAREAMLRATHRDGAPWTLVDFNDQRLGRLTLVRNLLDRLPDTRVDVPLPELPELKGKLHREHYDVLKPIEDFPVEE

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2547132130 Stenotrophomonas maltophilia RR-10 Isolate Unclassified
3 2571042365 Lysobacter oryzae DSM 21044 Isolate Rhizosphere
4 2576861471 Stenotrophomonas rhizophila DSM 14405 Isolate Rhizosphere
5 2643221579 Pseudoxanthomonas sp. Root630 Isolate Unclassified
6 2643221581 Pseudoxanthomonas sp. Root65 Isolate Unclassified
7 2643221695 Lysobacter sp. Root494 Isolate Unclassified
8 2747842428 Stenotrophomonas sp. WCS2014-113 Isolate Unclassified
9 2747842501 Xanthomonas sp. WCS2014-23 Isolate Unclassified
10 2765235840 Stenotrophomonas maltophilia AA1 Isolate Unclassified
11 2816332141 Stenotrophomonas muris 1190 (v2) (version 2) Isolate Unclassified
12 2818991457 Xanthomonas translucens 569 Isolate Unclassified
13 2842391507 Stenotrophomonas maltophilia SEMIA 4027 Isolate Nodule
14 2842757796 Stenotrophomonas sp. R-72406 Isolate Unclassified
15 2852649853 Stenotrophomonas sp. JAI102 Isolate Rhizosphere
16 2852684882 Xanthomonas sp. JAI131 Isolate Rhizosphere
17 2857442823 Stenotrophomonas sp. R-74235 Isolate Unclassified
18 2874220319 Stenotrophomonas maltophilia PS5 Isolate Unclassified
19 2894414249 Luteimonas sp. LNNU 24178 Isolate Rhizosphere
20 2896253425 Aurantiacibacter rhizosphaerae GH3-10 Isolate Rhizosphere
21 2919089067 Stenotrophomonas sp. 1337 Isolate Rhizosphere
22 2919130084 Xanthomonas sp. 1678 Isolate Rhizosphere
23 2919134579 Stenotrophomonas geniculata 1733 Isolate Rhizosphere
24 2923516293 Pseudoxanthomonas mexicana SLBN-89 Isolate Rhizosphere
25 2928496128 Stenotrophomonas indicatrix 1163 Isolate Unclassified
26 2929195423 Xanthomonas sp. R-73098 Hybrid assembly Isolate Unclassified
27 2931380184 Stenotrophomonas sp. DR822 Isolate Rhizosphere
28 2937610967 Stenotrophomonas maltophilia EP20 Isolate Unclassified
29 2939589442 Stenotrophomonas rhizophila 716 Isolate Rhizosphere
30 2939622612 Stenotrophomonas sp. 2619 Isolate Rhizosphere
31 2939626828 Stenotrophomonas sp. 2694 Isolate Rhizosphere
32 2941475908 Stenotrophomonas rhizophila 2680 Isolate Rhizosphere
33 2941489479 Lysobacter enzymogenes 2943 Isolate Rhizosphere
34 2961047084 Stenotrophomonas maltophilia EP5 Isolate Unclassified
35 2961064222 Stenotrophomonas maltophilia EP13 Isolate Unclassified
36 2974307012 Stenotrophomonas sp. SORGH_AS_0282 Isolate Unclassified
37 2977247770 Stenotrophomonas rhizophila SORGH_AS 457 Isolate Unclassified
38 2984514374 Stenotrophomonas sp. SORGH_AS282 Isolate Aerial Root
39 2987605356 Stenotrophomonas sp. ATCM1_4 Isolate Unclassified
40 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
41 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
42 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
43 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
44 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
45 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
46 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
47 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
48 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
49 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
50 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
51 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
52 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
53 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
54 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
55 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
56 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
57 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
58 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
59 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
60 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
61 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
62 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
63 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
64 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
65 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
66 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
67 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
68 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
69 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
70 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
71 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
72 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
73 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
74 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
75 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
76 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
77 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
78 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
79 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
80 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
82 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
83 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
84 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
86 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
88 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
94 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
97 3300030736 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 6 Metagenome Rhizosphere
98 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
99 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
100 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
101 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
102 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
103 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
104 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
105 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
106 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
107 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
108 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
109 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
110 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
111 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
112 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
113 3300039145 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JP6-T1 Metagenome Unclassified
114 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
115 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
116 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
117 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
118 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
119 3300041463 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_7 MetaG Metagenome Rhizoplane
120 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
121 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
122 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
123 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
124 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
125 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
126 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
127 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
128 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
129 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
130 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
131 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
132 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
133 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
134 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
135 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
136 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
137 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
138 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
139 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
140 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
141 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
142 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
143 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
144 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
145 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
146 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
147 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
148 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
149 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
150 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
151 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
152 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
153 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
162 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
163 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
164 3300049761 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control Metagenome Rhizosphere
165 3300049762 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_A_4_control Metagenome Rhizosphere
166 3300049772 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_B_4_control Metagenome Rhizosphere
167 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
169 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
170 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
171 8003014200 Lysobacter changpingensis Cm-3-T8 Isolate Rhizosphere
172 8021622325 Xanthomonas sp. LMG12462 Isolate Rhizosphere
173 8021626552 Xanthomonas sp. LMG12460 Isolate Rhizosphere
174 8021648035 Xanthomonas sp. LMG 12461 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 86.05
Metatranscriptomes 0
Isolates 13.95

Biome Distribution

Category Percentage (%)
Aerial Root 0.33
Bulb 0
Endosphere 22.26
Nodule 0.66
Rhizoplane 1.99
Rhizosphere 49.83
Stem 0
Stem Tuber 0
Unclassified 24.92

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_306729 2162886007 Bacteria 6017
2 SwRhRL2b_contig_3845428 2162886007 Bacteria 2488
3 JGI25152J39213_1000480 3300002773 Bacteria 22834
4 JGI25150J39212_1000356 3300002774 Bacteria 22473
5 JGI25151J46595_10000924 3300003187 Bacteria 22834
6 JGI25151J46595_10015338 3300003187 Bacteria 3380
7 JGI25153J46596_10000050 3300003215 Bacteria 140710
8 rootH2_10111575 3300003320 Bacteria 2962
9 Ga0055526_1001480 3300003771 Bacteria 16662
10 Ga0055526_1020207 3300003771 Bacteria 2382
11 Ga0055537_1000372 3300003773 Bacteria 30610
12 Ga0055524_1003485 3300003775 Bacteria 7626
13 Ga0055536_1002006 3300003781 Bacteria 11675
14 Ga0055536_1002108 3300003781 Bacteria 11321
15 Ga0055536_1002508 3300003781 Bacteria 10297
16 Ga0055536_1002916 3300003781 Bacteria 9394
17 Ga0055534_1000252 3300003784 Bacteria 37490
18 Ga0055528_1009981 3300003790 Bacteria 3911
19 Ga0055530_10002696 3300003791 Bacteria 11053
20 Ga0055530_10002710 3300003791 Bacteria 11018
21 Ga0055530_10032990 3300003791 Bacteria 1340
22 Ga0055531_10002096 3300003794 Bacteria 13693
23 Ga0055531_10002569 3300003794 Bacteria 12052
24 Ga0055531_10002957 3300003794 Bacteria 11050
25 Ga0055531_10006582 3300003794 Bacteria 6560
26 Ga0055531_10009716 3300003794 Bacteria 4886
27 Ga0058692_1000032 3300003856 Bacteria 179581
28 Ga0058692_1000107 3300003856 Bacteria 55344
29 Ga0065714_10013386 3300005288 Bacteria 2646
30 Ga0065704_10071251 3300005289 Bacteria 12240
31 Ga0065704_10078342 3300005289 Bacteria 4460
32 Ga0070670_100005259 3300005331 Bacteria 10902
33 Ga0070668_100003799 3300005347 Bacteria 11163
34 Ga0070668_100103396 3300005347 Bacteria 2260
35 Ga0070665_100524630 3300005548 Bacteria 1196
36 Ga0068854_100266726 3300005578 Bacteria 1373
37 Ga0075363_100177762 3300006048 Bacteria 1210
38 Ga0075364_10025874 3300006051 Bacteria 3739
39 Ga0075364_10056656 3300006051 Bacteria 2566
40 Ga0075364_10106987 3300006051 Bacteria 1864
41 Ga0075364_10143348 3300006051 Bacteria 1608
42 Ga0075370_10215099 3300006353 Bacteria 1135
43 Ga0079104_1011203 3300006946 Bacteria 2897
44 Ga0105251_10002229 3300009011 Bacteria 15465
45 Ga0105251_10004731 3300009011 Bacteria 9126
46 Ga0105243_10023660 3300009148 Bacteria 4681
47 Ga0105243_10348190 3300009148 Bacteria 1359
48 Ga0157373_10131342 3300013100 Bacteria 1761
49 Ga0157373_10283433 3300013100 Bacteria 1174
50 Ga0157371_10001023 3300013102 Bacteria 30594
51 Ga0157371_10012173 3300013102 Bacteria 6587
52 Ga0157371_10049839 3300013102 Bacteria 2974
53 Ga0157370_10004159 3300013104 Bacteria 16748
54 Ga0157370_10228731 3300013104 Bacteria 1722
55 Ga0157370_10316960 3300013104 Bacteria 1439
56 Ga0157380_10186658 3300014326 Bacteria 1827
57 Ga0182008_10002252 3300014497 Bacteria 12194
58 Ga0182006_1006204 3300015261 Bacteria 5580
59 Ga0182006_1061997 3300015261 Bacteria 1408
60 Ga0182007_10000173 3300015262 Bacteria 43981
61 Ga0182005_1000468 3300015265 Bacteria 20958
62 Ga0182005_1008030 3300015265 Bacteria 3131
63 Ga0163161_10006943 3300017792 Bacteria 7827
64 Ga0163161_10014391 3300017792 Bacteria 5508
65 Ga0163161_10070175 3300017792 Bacteria 2562
66 Ga0163161_10163222 3300017792 Bacteria 1700
67 Ga0207425_1000117 3300025245 Bacteria 74911
68 Ga0207425_1038629 3300025245 Bacteria 917
69 Ga0209129_1000011 3300025258 Bacteria 568657
70 Ga0209565_1000274 3300025263 Bacteria 52312
71 Ga0209565_1015087 3300025263 Bacteria 1752
72 Ga0209673_1001264 3300025273 Bacteria 26004
73 Ga0209675_1000015 3300025291 Bacteria 403517
74 Ga0209676_1000436 3300025292 Bacteria 72143
75 Ga0209676_1000594 3300025292 Bacteria 53972
76 Ga0209676_1000781 3300025292 Bacteria 42548
77 Ga0209676_1001136 3300025292 Bacteria 29134
78 Ga0209676_1001981 3300025292 Bacteria 16305
79 Ga0209676_1002305 3300025292 Bacteria 13899
80 Ga0209676_1002844 3300025292 Bacteria 11437
81 Ga0209676_1005388 3300025292 Bacteria 6712
82 Ga0209025_1000002 3300025294 Bacteria 1393142
83 Ga0209025_1000564 3300025294 Bacteria 67936
84 Ga0209025_1045384 3300025294 Bacteria 1822
85 Ga0209564_1000037 3300025295 Bacteria 414794
86 Ga0209758_1000003 3300025297 Bacteria 1398533
87 Ga0209050_1000147 3300025298 Bacteria 164512
88 Ga0209050_1000328 3300025298 Bacteria 94963
89 Ga0209050_1005567 3300025298 Bacteria 7836
90 Ga0209050_1013845 3300025298 Bacteria 3539
91 Ga0209256_1001805 3300025299 Bacteria 20160
92 Ga0209256_1002374 3300025299 Bacteria 15525
93 Ga0209051_1003931 3300025303 Bacteria 9469
94 Ga0209257_1000086 3300025304 Bacteria 287437
95 Ga0209257_1000343 3300025304 Bacteria 96876
96 Ga0209257_1000655 3300025304 Bacteria 54777
97 Ga0209257_1000738 3300025304 Bacteria 49567
98 Ga0209257_1002327 3300025304 Bacteria 19162
99 Ga0209257_1003212 3300025304 Bacteria 14433
100 Ga0209257_1004934 3300025304 Bacteria 9799
101 Ga0209257_1018733 3300025304 Bacteria 2644
102 Ga0209257_1028061 3300025304 Bacteria 1859
103 Ga0207713_1000294 3300025735 Bacteria 57476
104 Ga0207713_1007926 3300025735 Bacteria 6189
105 Ga0207650_10013553 3300025925 Bacteria 5648
106 Ga0207709_10002269 3300025935 Bacteria 12198
107 Ga0207668_10036652 3300025972 Bacteria 3275
108 Ga0207640_10235708 3300025981 Bacteria 1411
109 Ga0209371_1000028 3300027312 Bacteria 429688
110 Ga0209371_1000055 3300027312 Bacteria 257599
111 Ga0209974_10019568 3300027876 Bacteria 2244
112 Ga0268266_10392241 3300028379 Bacteria 1311
113 Ga0268256_1000030 3300030500 Bacteria 429688
114 Ga0268256_1000054 3300030500 Bacteria 257599
115 Ga0316180_1145477 3300030736 Bacteria 2358
116 Ga0316183_1070943 3300030742 Bacteria 5376
117 Ga0316181_1017997 3300030744 Bacteria 6507
118 Ga0316182_1085314 3300030745 Bacteria 3184
119 Ga0316182_1107481 3300030745 Bacteria 2531
120 Ga0307408_100321446 3300031548 Bacteria 1303
121 Ga0307405_10074324 3300031731 Bacteria 2198
122 Ga0307413_10006589 3300031824 Bacteria 5319
123 Ga0307410_10013086 3300031852 Bacteria 4827
124 Ga0307410_10026395 3300031852 Bacteria 3656
125 Ga0307410_10576779 3300031852 Bacteria 935
126 Ga0307406_10215809 3300031901 Bacteria 1422
127 Ga0307412_10012273 3300031911 Bacteria 4988
128 Ga0307412_10121218 3300031911 Bacteria 1883
129 Ga0307409_100016419 3300031995 Bacteria 4898
130 Ga0307409_100034516 3300031995 Bacteria 3695
131 Ga0307409_100037691 3300031995 Bacteria 3567
132 Ga0307409_100289049 3300031995 Bacteria 1519
133 Ga0307409_100312324 3300031995 Bacteria 1467
134 Ga0307416_100027856 3300032002 Bacteria 4192
135 Ga0307416_100307751 3300032002 Bacteria 1579
136 Ga0307414_10019217 3300032004 Bacteria 4228
137 Ga0307414_10019635 3300032004 Bacteria 4192
138 Ga0307414_10059073 3300032004 Bacteria 2705
139 Ga0307414_10127035 3300032004 Bacteria 1972
140 Ga0307414_10229172 3300032004 Bacteria 1530
141 Ga0307414_10249113 3300032004 Bacteria 1475
142 Ga0307414_10266960 3300032004 Bacteria 1431
143 Ga0307411_10062829 3300032005 Bacteria 2478
144 Ga0307411_10698798 3300032005 Bacteria 883
145 Ga0395905_0118577 3300037471 Bacteria 2487
146 Ga0237819_00412 3300038705 Bacteria 14816
147 Ga0237819_02950 3300038705 Bacteria 3183
148 Ga0237819_04909 3300038705 Bacteria 2145
149 Ga0237816_00086 3300039145 Bacteria 6647
150 Ga0439436_0011096 3300041404 Bacteria 2739
151 Ga0439465_0000362 3300041413 Bacteria 12994
152 Ga0439465_0069085 3300041413 Bacteria 1182
153 Ga0451797_0481523 3300041453 Bacteria 1485
154 Ga0451800_0514176 3300041459 Bacteria 6401
155 Ga0451806_112225 3300041462 Bacteria 6097
156 Ga0451804_0012872 3300041463 Bacteria 1095
157 Ga0451807_1026549 3300041486 Bacteria 3848
158 Ga0439445_0008548 3300042004 Bacteria 2397
159 Ga0439432_005990 3300042006 Bacteria 4362
160 Ga0439432_015006 3300042006 Bacteria 2618
161 Ga0439432_030673 3300042006 Bacteria 1742
162 Ga0439449_0004898 3300042007 Bacteria 5156
163 Ga0439449_0007530 3300042007 Bacteria 4136
164 Ga0439449_0017681 3300042007 Bacteria 2677
165 Ga0439449_0023440 3300042007 Bacteria 2308
166 Ga0439449_0029871 3300042007 Bacteria 2031
167 Ga0451577_0013341 3300042876 Bacteria 7696
168 Ga0453684_0001075 3300044712 Bacteria 86968
169 Ga0451576_0000025 3300045051 Bacteria 427980
170 Ga0495627_078578 3300046453 Bacteria 958
171 Ga0495638_0002420 3300046460 Bacteria 15249
172 Ga0495638_0023422 3300046460 Bacteria 4038
173 Ga0495610_0001467 3300046512 Bacteria 20805
174 Ga0495631_0001602 3300046518 Bacteria 13536
175 Ga0495643_0001732 3300046522 Bacteria 18841
176 Ga0495663_0002021 3300046525 Bacteria 6239
177 Ga0495663_0008042 3300046525 Bacteria 2918
178 Ga0495663_0011645 3300046525 Bacteria 2447
179 Ga0495663_0030533 3300046525 Bacteria 1597
180 Ga0495633_0014853 3300046558 Bacteria 4054
181 Ga0495656_0011020 3300046615 Bacteria 3306
182 Ga0495625_0045276 3300046660 Bacteria 3181
183 Ga0495670_0083000 3300046691 Bacteria 1634
184 Ga0495636_0113783 3300047318 Bacteria 1192
185 Ga0495672_0000792 3300047320 Bacteria 34270
186 Ga0495686_0068036 3300047472 Bacteria 2197
187 Ga0496114_0007208 3300048917 Bacteria 8778
188 Ga0496116_0001249 3300048919 Bacteria 29528
189 Ga0496116_0028754 3300048919 Bacteria 4020
190 Ga0496116_0110547 3300048919 Bacteria 1616
191 Ga0496117_0003368 3300048920 Bacteria 18629
192 Ga0496117_0004014 3300048920 Bacteria 16599
193 Ga0496117_0004363 3300048920 Bacteria 15693
194 Ga0496117_0032475 3300048920 Bacteria 3965
195 Ga0496117_0169588 3300048920 Bacteria 1268
196 Ga0496118_0001509 3300048921 Bacteria 34684
197 Ga0496118_0002520 3300048921 Bacteria 24587
198 Ga0496118_0013515 3300048921 Bacteria 7712
199 Ga0496118_0017235 3300048921 Bacteria 6585
200 Ga0496118_0036750 3300048921 Bacteria 3953
201 Ga0496118_0060756 3300048921 Bacteria 2804
202 Ga0496119_0001171 3300048922 Bacteria 32847
203 Ga0496119_0002089 3300048922 Bacteria 22562
204 Ga0496120_0000480 3300048923 Bacteria 62598
205 Ga0496120_0000537 3300048923 Bacteria 58209
206 Ga0496121_0002935 3300048924 Bacteria 24926
207 Ga0496121_0006901 3300048924 Bacteria 13856
208 Ga0496121_0025182 3300048924 Bacteria 5658
209 Ga0496121_0025861 3300048924 Bacteria 5553
210 Ga0496122_0000859 3300048925 Bacteria 57207
211 Ga0496122_0000903 3300048925 Bacteria 54843
212 Ga0496122_0034948 3300048925 Bacteria 4102
213 Ga0496122_0149896 3300048925 Bacteria 1441
214 Ga0496123_0000417 3300048926 Bacteria 77334
215 Ga0496123_0000702 3300048926 Bacteria 54737
216 Ga0496123_0008015 3300048926 Bacteria 9785
217 Ga0496123_0027396 3300048926 Bacteria 4245
218 Ga0496123_0045694 3300048926 Bacteria 2980
219 Ga0496124_0000653 3300048927 Bacteria 57229
220 Ga0496124_0001664 3300048927 Bacteria 31677
221 Ga0496124_0013690 3300048927 Bacteria 7902
222 Ga0496124_0016287 3300048927 Bacteria 7079
223 Ga0496124_0016830 3300048927 Bacteria 6930
224 Ga0496124_0025149 3300048927 Bacteria 5397
225 Ga0496124_0026819 3300048927 Bacteria 5186
226 Ga0496124_0055870 3300048927 Bacteria 3333
227 Ga0496125_0009651 3300048928 Bacteria 9866
228 Ga0496125_0010770 3300048928 Bacteria 9210
229 Ga0496125_0011102 3300048928 Bacteria 9035
230 Ga0496125_0024593 3300048928 Bacteria 5534
231 Ga0496125_0051605 3300048928 Bacteria 3390
232 Ga0496125_0054173 3300048928 Bacteria 3280
233 Ga0496125_0089460 3300048928 Bacteria 2315
234 Ga0496126_0002009 3300048929 Bacteria 28764
235 Ga0496126_0093988 3300048929 Bacteria 2632
236 Ga0496126_0147291 3300048929 Bacteria 2021
237 Ga0496126_0375810 3300048929 Bacteria 1158
238 Ga0501300_016313 3300049523 Bacteria 1084
239 Ga0501031_0043413 3300049568 Bacteria 2934
240 Ga0501032_0005929 3300049569 Bacteria 9025
241 Ga0501033_0003114 3300049570 Bacteria 13771
242 Ga0501034_0000636 3300049571 Bacteria 54505
243 Ga0501034_0001777 3300049571 Bacteria 27560
244 Ga0501034_0051562 3300049571 Bacteria 4149
245 Ga0501034_0060996 3300049571 Bacteria 3788
246 Ga0501036_0034775 3300049572 Bacteria 4263
247 Ga0501037_0003917 3300049573 Bacteria 10799
248 Ga0501038_0005610 3300049574 Bacteria 11648
249 Ga0501043_0008837 3300049579 Bacteria 7928
250 Ga0501070_0017908 3300049586 Bacteria 5947
251 Ga0501202_024954 3300049652 Bacteria 1215
252 Ga0501223_019201 3300049663 Bacteria 1343
253 Ga0501264_003971 3300049761 Bacteria 1343
254 Ga0501265_002279 3300049762 Bacteria 2175
255 Ga0501275_000285 3300049772 Bacteria 5737
256 Ga0501035_0021820 3300049822 Bacteria 5884
257 Ga0501044_0009841 3300049823 Bacteria 10392
258 nmdc:mga00v17_23000_c1 3300050491 Bacteria 3602
259 Ga0500634_0000574 3300053161 Bacteria 12167

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300048929 Ga0496126_0375810 Ga0496126_0375810_16_696 225
2 3300041413 Ga0439465_0069085 Ga0439465_0069085_439_1155 231
3 3300032004 Ga0307414_10019217 Ga0307414_100192178 239
4 3300048926 Ga0496123_0008015 Ga0496123_0008015_4197_4931 243
5 3300042876 Ga0451577_0013341 Ga0451577_0013341_1641_2447 245
6 iso_pu_bacteria 2571042365 2572254542 249
7 3300037471 Ga0395905_0118577 Ga0395905_0118577_948_1724 250
8 iso_pu_bacteria 2896253425 2896253801 251
9 3300044712 Ga0453684_0001075 Ga0453684_0001075_12816_13574 252
10 3300045051 Ga0451576_0000025 Ga0451576_0000025_73154_73912 252
11 3300030745 Ga0316182_1085314 Ga0316182_10853144 253
12 3300042006 Ga0439432_005990 Ga0439432_005990_3566_4348 253
13 3300049652 Ga0501202_024954 Ga0501202_024954_107_889 253
14 3300049663 Ga0501223_019201 Ga0501223_019201_412_1194 253
15 iso_pu_bacteria 2842757796 2842759707 253
16 iso_pu_bacteria 2547132130 2547502343 254
17 iso_pu_bacteria 2576861471 2578459560 254
18 iso_pu_bacteria 2643221695 2644528416 254
19 iso_pu_bacteria 2747842428 2747950390 254
20 iso_pu_bacteria 2747842501 2748018899 254
21 iso_pu_bacteria 2765235840 2765577748 254
22 iso_pu_bacteria 2816332141 2816519520 254
23 iso_pu_bacteria 2818991457 2819662746 254
24 iso_pu_bacteria 2842391507 2842395399 254
25 iso_pu_bacteria 2852684882 2852687514 254
26 iso_pu_bacteria 2874220319 2874220349 254
27 iso_pu_bacteria 2894414249 2894414474 254
28 iso_pu_bacteria 2919089067 2919091619 254
29 iso_pu_bacteria 2919130084 2919134303 254
30 iso_pu_bacteria 2919134579 2919134969 254
31 iso_pu_bacteria 2928496128 2928498439 254
32 iso_pu_bacteria 2929195423 2929198952 254
33 iso_pu_bacteria 2937610967 2937611244 254
34 iso_pu_bacteria 2939589442 2939591826 254
35 iso_pu_bacteria 2939622612 2939626185 254
36 iso_pu_bacteria 2939626828 2939630112 254
37 iso_pu_bacteria 2941475908 2941477313 254
38 iso_pu_bacteria 2941489479 2941490113 254
39 iso_pu_bacteria 2961047084 2961047114 254
40 iso_pu_bacteria 2961064222 2961068484 254
41 iso_pu_bacteria 2974307012 2974310009 254
42 iso_pu_bacteria 2977247770 2977250744 254
43 iso_pu_bacteria 2984514374 2984514771 254
44 iso_pu_bacteria 2987605356 2987607979 254
45 iso_pu_bacteria 8003014200 8003015036 254
46 iso_pu_bacteria 8021622325 8021622518 254
47 iso_pu_bacteria 8021626552 8021627978 254
48 iso_pu_bacteria 8021648035 8021652184 254
49 3300003781 Ga0055536_1002006 Ga0055536_100200610 255
50 3300003791 Ga0055530_10002696 Ga0055530_100026969 255
51 3300003791 Ga0055530_10002710 Ga0055530_100027103 255
52 3300003794 Ga0055531_10002957 Ga0055531_100029573 255
53 3300009011 Ga0105251_10004731 Ga0105251_100047313 255
54 3300025292 Ga0209676_1000594 Ga0209676_10005947 255
55 3300025298 Ga0209050_1000147 Ga0209050_100014789 255
56 3300025298 Ga0209050_1000328 Ga0209050_100032814 255
57 3300025303 Ga0209051_1003931 Ga0209051_10039312 255
58 3300025304 Ga0209257_1000086 Ga0209257_100008612 255
59 3300025735 Ga0207713_1007926 Ga0207713_10079265 255
60 3300046512 Ga0495610_0001467 Ga0495610_0001467_8187_8954 255
61 3300046518 Ga0495631_0001602 Ga0495631_0001602_8201_8968 255
62 iso_pu_bacteria 2643221579 2643907298 255
63 iso_pu_bacteria 2643221581 2643915200 255
64 iso_pu_bacteria 2923516293 2923519261 255
65 3300041453 Ga0451797_0481523 Ga0451797_0481523_603_1373 256
66 3300002773 JGI25152J39213_1000480 JGI25152J39213_100048013 257
67 3300002774 JGI25150J39212_1000356 JGI25150J39212_100035614 257
68 3300003187 JGI25151J46595_10000924 JGI25151J46595_1000092413 257
69 3300003215 JGI25153J46596_10000050 JGI25153J46596_10000050173 257
70 3300005288 Ga0065714_10013386 Ga0065714_100133862 257
71 3300025245 Ga0207425_1000117 Ga0207425_100011773 257
72 3300025258 Ga0209129_1000011 Ga0209129_1000011308 257
73 3300025294 Ga0209025_1000002 Ga0209025_1000002490 257
74 3300025297 Ga0209758_1000003 Ga0209758_1000003497 257
75 3300027876 Ga0209974_10019568 Ga0209974_100195683 257
76 3300030745 Ga0316182_1107481 Ga0316182_11074813 257
77 3300038705 Ga0237819_00412 Ga0237819_00412_1882_2661 257
78 3300038705 Ga0237819_04909 Ga0237819_04909_103_882 257
79 3300046525 Ga0495663_0011645 Ga0495663_0011645_455_1228 257
80 3300047472 Ga0495686_0068036 Ga0495686_0068036_263_1042 257
81 3300049523 Ga0501300_016313 Ga0501300_016313_292_1074 257
82 3300049761 Ga0501264_003971 Ga0501264_003971_367_1179 257
83 3300049762 Ga0501265_002279 Ga0501265_002279_481_1293 257
84 3300049772 Ga0501275_000285 Ga0501275_000285_377_1189 257
85 2162886007 SwRhRL2b_contig_3845428 SwRhRL2b_0169.00003190 258
86 3300003187 JGI25151J46595_10015338 JGI25151J46595_100153384 258
87 3300003320 rootH2_10111575 rootH2_101115751 258
88 3300003771 Ga0055526_1001480 Ga0055526_10014807 258
89 3300003771 Ga0055526_1020207 Ga0055526_10202073 258
90 3300003773 Ga0055537_1000372 Ga0055537_100037223 258
91 3300003775 Ga0055524_1003485 Ga0055524_10034855 258
92 3300003781 Ga0055536_1002508 Ga0055536_10025082 258
93 3300003781 Ga0055536_1002916 Ga0055536_10029162 258
94 3300003784 Ga0055534_1000252 Ga0055534_100025216 258
95 3300003790 Ga0055528_1009981 Ga0055528_10099812 258
96 3300003791 Ga0055530_10032990 Ga0055530_100329902 258
97 3300003794 Ga0055531_10002096 Ga0055531_100020967 258
98 3300003794 Ga0055531_10002569 Ga0055531_100025695 258
99 3300003794 Ga0055531_10006582 Ga0055531_100065823 258
100 3300003794 Ga0055531_10009716 Ga0055531_100097163 258
101 3300003856 Ga0058692_1000032 Ga0058692_1000032155 258
102 3300003856 Ga0058692_1000107 Ga0058692_100010719 258
103 3300005289 Ga0065704_10078342 Ga0065704_100783423 258
104 3300005331 Ga0070670_100005259 Ga0070670_1000052594 258
105 3300005347 Ga0070668_100003799 Ga0070668_1000037993 258
106 3300005347 Ga0070668_100103396 Ga0070668_1001033962 258
107 3300005548 Ga0070665_100524630 Ga0070665_1005246301 258
108 3300005578 Ga0068854_100266726 Ga0068854_1002667262 258
109 3300006048 Ga0075363_100177762 Ga0075363_1001777621 258
110 3300006051 Ga0075364_10025874 Ga0075364_100258743 258
111 3300006051 Ga0075364_10056656 Ga0075364_100566562 258
112 3300006051 Ga0075364_10106987 Ga0075364_101069871 258
113 3300006051 Ga0075364_10143348 Ga0075364_101433482 258
114 3300006353 Ga0075370_10215099 Ga0075370_102150992 258
115 3300006946 Ga0079104_1011203 Ga0079104_10112033 258
116 3300009011 Ga0105251_10002229 Ga0105251_1000222916 258
117 3300009148 Ga0105243_10023660 Ga0105243_100236604 258
118 3300009148 Ga0105243_10348190 Ga0105243_103481901 258
119 3300013100 Ga0157373_10131342 Ga0157373_101313421 258
120 3300013100 Ga0157373_10283433 Ga0157373_102834331 258
121 3300013102 Ga0157371_10001023 Ga0157371_1000102323 258
122 3300013102 Ga0157371_10012173 Ga0157371_100121734 258
123 3300013102 Ga0157371_10049839 Ga0157371_100498391 258
124 3300013104 Ga0157370_10004159 Ga0157370_100041598 258
125 3300013104 Ga0157370_10228731 Ga0157370_102287312 258
126 3300013104 Ga0157370_10316960 Ga0157370_103169602 258
127 3300014326 Ga0157380_10186658 Ga0157380_101866583 258
128 3300014497 Ga0182008_10002252 Ga0182008_100022525 258
129 3300015261 Ga0182006_1006204 Ga0182006_10062044 258
130 3300015261 Ga0182006_1061997 Ga0182006_10619972 258
131 3300015262 Ga0182007_10000173 Ga0182007_1000017320 258
132 3300015265 Ga0182005_1000468 Ga0182005_100046810 258
133 3300015265 Ga0182005_1008030 Ga0182005_10080304 258
134 3300017792 Ga0163161_10006943 Ga0163161_100069438 258
135 3300017792 Ga0163161_10014391 Ga0163161_100143912 258
136 3300017792 Ga0163161_10070175 Ga0163161_100701752 258
137 3300017792 Ga0163161_10163222 Ga0163161_101632222 258
138 3300025245 Ga0207425_1038629 Ga0207425_10386291 258
139 3300025263 Ga0209565_1000274 Ga0209565_100027418 258
140 3300025263 Ga0209565_1015087 Ga0209565_10150872 258
141 3300025273 Ga0209673_1001264 Ga0209673_100126411 258
142 3300025291 Ga0209675_1000015 Ga0209675_100001525 258
143 3300025292 Ga0209676_1000781 Ga0209676_100078127 258
144 3300025292 Ga0209676_1001136 Ga0209676_100113624 258
145 3300025292 Ga0209676_1002305 Ga0209676_10023058 258
146 3300025292 Ga0209676_1002844 Ga0209676_10028442 258
147 3300025292 Ga0209676_1005388 Ga0209676_10053882 258
148 3300025294 Ga0209025_1000564 Ga0209025_10005647 258
149 3300025295 Ga0209564_1000037 Ga0209564_1000037343 258
150 3300025298 Ga0209050_1005567 Ga0209050_10055672 258
151 3300025298 Ga0209050_1013845 Ga0209050_10138451 258
152 3300025299 Ga0209256_1001805 Ga0209256_100180513 258
153 3300025299 Ga0209256_1002374 Ga0209256_10023745 258
154 3300025304 Ga0209257_1000343 Ga0209257_100034319 258
155 3300025304 Ga0209257_1000655 Ga0209257_10006558 258
156 3300025304 Ga0209257_1000738 Ga0209257_10007387 258
157 3300025304 Ga0209257_1002327 Ga0209257_100232711 258
158 3300025304 Ga0209257_1003212 Ga0209257_10032128 258
159 3300025304 Ga0209257_1004934 Ga0209257_10049346 258
160 3300025304 Ga0209257_1018733 Ga0209257_10187333 258
161 3300025304 Ga0209257_1028061 Ga0209257_10280611 258
162 3300025735 Ga0207713_1000294 Ga0207713_10002943 258
163 3300025925 Ga0207650_10013553 Ga0207650_100135534 258
164 3300025935 Ga0207709_10002269 Ga0207709_1000226912 258
165 3300025972 Ga0207668_10036652 Ga0207668_100366523 258
166 3300025981 Ga0207640_10235708 Ga0207640_102357081 258
167 3300027312 Ga0209371_1000028 Ga0209371_1000028375 258
168 3300027312 Ga0209371_1000055 Ga0209371_100005519 258
169 3300028379 Ga0268266_10392241 Ga0268266_103922411 258
170 3300030500 Ga0268256_1000030 Ga0268256_100003020 258
171 3300030500 Ga0268256_1000054 Ga0268256_1000054215 258
172 3300030736 Ga0316180_1145477 Ga0316180_11454773 258
173 3300030742 Ga0316183_1070943 Ga0316183_10709433 258
174 3300030744 Ga0316181_1017997 Ga0316181_10179973 258
175 3300031548 Ga0307408_100321446 Ga0307408_1003214462 258
176 3300031731 Ga0307405_10074324 Ga0307405_100743243 258
177 3300031824 Ga0307413_10006589 Ga0307413_100065893 258
178 3300031852 Ga0307410_10013086 Ga0307410_100130862 258
179 3300031852 Ga0307410_10026395 Ga0307410_100263953 258
180 3300031852 Ga0307410_10576779 Ga0307410_105767792 258
181 3300031901 Ga0307406_10215809 Ga0307406_102158091 258
182 3300031911 Ga0307412_10012273 Ga0307412_100122731 258
183 3300031911 Ga0307412_10121218 Ga0307412_101212182 258
184 3300031995 Ga0307409_100016419 Ga0307409_1000164195 258
185 3300031995 Ga0307409_100034516 Ga0307409_1000345162 258
186 3300031995 Ga0307409_100037691 Ga0307409_1000376915 258
187 3300031995 Ga0307409_100289049 Ga0307409_1002890492 258
188 3300031995 Ga0307409_100312324 Ga0307409_1003123242 258
189 3300032002 Ga0307416_100027856 Ga0307416_1000278564 258
190 3300032002 Ga0307416_100307751 Ga0307416_1003077512 258
191 3300032004 Ga0307414_10019635 Ga0307414_100196352 258
192 3300032004 Ga0307414_10059073 Ga0307414_100590732 258
193 3300032004 Ga0307414_10127035 Ga0307414_101270352 258
194 3300032004 Ga0307414_10229172 Ga0307414_102291722 258
195 3300032004 Ga0307414_10249113 Ga0307414_102491133 258
196 3300032004 Ga0307414_10266960 Ga0307414_102669602 258
197 3300032005 Ga0307411_10062829 Ga0307411_100628292 258
198 3300032005 Ga0307411_10698798 Ga0307411_106987981 258
199 3300038705 Ga0237819_02950 Ga0237819_02950_1543_2325 258
200 3300039145 Ga0237816_00086 Ga0237816_00086_1117_1896 258
201 3300041404 Ga0439436_0011096 Ga0439436_0011096_1444_2250 258
202 3300041413 Ga0439465_0000362 Ga0439465_0000362_3704_4486 258
203 3300041459 Ga0451800_0514176 Ga0451800_0514176_5427_6203 258
204 3300041462 Ga0451806_112225 Ga0451806_112225_278_1054 258
205 3300041463 Ga0451804_0012872 Ga0451804_0012872_231_1007 258
206 3300041486 Ga0451807_1026549 Ga0451807_1026549_103_879 258
207 3300042004 Ga0439445_0008548 Ga0439445_0008548_894_1676 258
208 3300042006 Ga0439432_015006 Ga0439432_015006_223_1029 258
209 3300042006 Ga0439432_030673 Ga0439432_030673_579_1364 258
210 3300042007 Ga0439449_0004898 Ga0439449_0004898_2365_3171 258
211 3300042007 Ga0439449_0007530 Ga0439449_0007530_253_1035 258
212 3300042007 Ga0439449_0017681 Ga0439449_0017681_749_1540 258
213 3300042007 Ga0439449_0023440 Ga0439449_0023440_458_1237 258
214 3300042007 Ga0439449_0029871 Ga0439449_0029871_132_920 258
215 3300046453 Ga0495627_078578 Ga0495627_078578_21_800 258
216 3300046460 Ga0495638_0002420 Ga0495638_0002420_10449_11228 258
217 3300046460 Ga0495638_0023422 Ga0495638_0023422_1222_2001 258
218 3300046522 Ga0495643_0001732 Ga0495643_0001732_7985_8764 258
219 3300046525 Ga0495663_0002021 Ga0495663_0002021_3966_4745 258
220 3300046525 Ga0495663_0008042 Ga0495663_0008042_90_881 258
221 3300046525 Ga0495663_0030533 Ga0495663_0030533_459_1247 258
222 3300046558 Ga0495633_0014853 Ga0495633_0014853_175_963 258
223 3300046615 Ga0495656_0011020 Ga0495656_0011020_10_786 258
224 3300046660 Ga0495625_0045276 Ga0495625_0045276_764_1543 258
225 3300046691 Ga0495670_0083000 Ga0495670_0083000_292_1068 258
226 3300047318 Ga0495636_0113783 Ga0495636_0113783_179_955 258
227 3300047320 Ga0495672_0000792 Ga0495672_0000792_10117_10896 258
228 3300048919 Ga0496116_0001249 Ga0496116_0001249_4063_4851 258
229 3300048919 Ga0496116_0028754 Ga0496116_0028754_1957_2736 258
230 3300048919 Ga0496116_0110547 Ga0496116_0110547_642_1421 258
231 3300048920 Ga0496117_0003368 Ga0496117_0003368_7909_8685 258
232 3300048920 Ga0496117_0004014 Ga0496117_0004014_8935_9714 258
233 3300048920 Ga0496117_0004363 Ga0496117_0004363_4666_5442 258
234 3300048920 Ga0496117_0032475 Ga0496117_0032475_1313_2095 258
235 3300048920 Ga0496117_0169588 Ga0496117_0169588_365_1147 258
236 3300048921 Ga0496118_0001509 Ga0496118_0001509_23625_24401 258
237 3300048921 Ga0496118_0002520 Ga0496118_0002520_8070_8849 258
238 3300048921 Ga0496118_0013515 Ga0496118_0013515_3026_3802 258
239 3300048921 Ga0496118_0017235 Ga0496118_0017235_4161_4952 258
240 3300048921 Ga0496118_0036750 Ga0496118_0036750_1038_1820 258
241 3300048921 Ga0496118_0060756 Ga0496118_0060756_143_919 258
242 3300048922 Ga0496119_0001171 Ga0496119_0001171_23347_24126 258
243 3300048922 Ga0496119_0002089 Ga0496119_0002089_13765_14541 258
244 3300048923 Ga0496120_0000480 Ga0496120_0000480_38526_39305 258
245 3300048923 Ga0496120_0000537 Ga0496120_0000537_42645_43421 258
246 3300048924 Ga0496121_0002935 Ga0496121_0002935_11291_12076 258
247 3300048924 Ga0496121_0006901 Ga0496121_0006901_3838_4617 258
248 3300048924 Ga0496121_0025182 Ga0496121_0025182_1994_2773 258
249 3300048924 Ga0496121_0025861 Ga0496121_0025861_2188_2976 258
250 3300048925 Ga0496122_0000859 Ga0496122_0000859_42747_43523 258
251 3300048925 Ga0496122_0000903 Ga0496122_0000903_21623_22408 258
252 3300048925 Ga0496122_0034948 Ga0496122_0034948_2206_2985 258
253 3300048925 Ga0496122_0149896 Ga0496122_0149896_19_807 258
254 3300048926 Ga0496123_0000417 Ga0496123_0000417_62874_63650 258
255 3300048926 Ga0496123_0000702 Ga0496123_0000702_32330_33115 258
256 3300048926 Ga0496123_0027396 Ga0496123_0027396_3447_4226 258
257 3300048926 Ga0496123_0045694 Ga0496123_0045694_976_1764 258
258 3300048927 Ga0496124_0000653 Ga0496124_0000653_42757_43533 258
259 3300048927 Ga0496124_0001664 Ga0496124_0001664_8121_8903 258
260 3300048927 Ga0496124_0013690 Ga0496124_0013690_3002_3784 258
261 3300048927 Ga0496124_0016287 Ga0496124_0016287_4322_5098 258
262 3300048927 Ga0496124_0016830 Ga0496124_0016830_2040_2819 258
263 3300048927 Ga0496124_0025149 Ga0496124_0025149_1300_2079 258
264 3300048927 Ga0496124_0026819 Ga0496124_0026819_279_1070 258
265 3300048927 Ga0496124_0055870 Ga0496124_0055870_1768_2550 258
266 3300048928 Ga0496125_0009651 Ga0496125_0009651_2163_2942 258
267 3300048928 Ga0496125_0010770 Ga0496125_0010770_3797_4576 258
268 3300048928 Ga0496125_0011102 Ga0496125_0011102_3786_4565 258
269 3300048928 Ga0496125_0024593 Ga0496125_0024593_2457_3254 258
270 3300048928 Ga0496125_0051605 Ga0496125_0051605_449_1228 258
271 3300048928 Ga0496125_0054173 Ga0496125_0054173_256_1047 258
272 3300048928 Ga0496125_0089460 Ga0496125_0089460_161_943 258
273 3300048929 Ga0496126_0002009 Ga0496126_0002009_6270_7049 258
274 3300048929 Ga0496126_0093988 Ga0496126_0093988_58_837 258
275 3300048929 Ga0496126_0147291 Ga0496126_0147291_132_923 258
276 3300049568 Ga0501031_0043413 Ga0501031_0043413_1939_2715 258
277 3300049569 Ga0501032_0005929 Ga0501032_0005929_6842_7618 258
278 3300049570 Ga0501033_0003114 Ga0501033_0003114_7246_8022 258
279 3300049571 Ga0501034_0001777 Ga0501034_0001777_5069_5845 258
280 3300049571 Ga0501034_0051562 Ga0501034_0051562_2084_2860 258
281 3300049571 Ga0501034_0060996 Ga0501034_0060996_1596_2372 258
282 3300049572 Ga0501036_0034775 Ga0501036_0034775_2432_3208 258
283 3300049573 Ga0501037_0003917 Ga0501037_0003917_9059_9835 258
284 3300049574 Ga0501038_0005610 Ga0501038_0005610_1503_2279 258
285 3300049579 Ga0501043_0008837 Ga0501043_0008837_3572_4348 258
286 3300049586 Ga0501070_0017908 Ga0501070_0017908_672_1448 258
287 3300049822 Ga0501035_0021820 Ga0501035_0021820_2840_3616 258
288 3300049823 Ga0501044_0009841 Ga0501044_0009841_657_1433 258
289 3300050491 nmdc:mga00v17_23000_c1 nmdc:mga00v17_23000_c1_1828_2619 258
290 3300053161 Ga0500634_0000574 Ga0500634_0000574_10007_10789 258
291 iso_pu_bacteria 2852649853 2852653067 258
292 iso_pu_bacteria 2857442823 2857445050 258
293 iso_pu_bacteria 2931380184 2931381995 258
294 2162886007 SwRhRL2b_contig_306729 SwRhRL2b_0301.00004740 259
295 3300003781 Ga0055536_1002108 Ga0055536_100210812 259
296 3300005289 Ga0065704_10071251 Ga0065704_1007125111 259
297 3300025292 Ga0209676_1000436 Ga0209676_100043618 259
298 3300025292 Ga0209676_1001981 Ga0209676_10019818 259
299 3300025294 Ga0209025_1045384 Ga0209025_10453842 259
300 3300048917 Ga0496114_0007208 Ga0496114_0007208_3644_4423 259
301 3300049571 Ga0501034_0000636 Ga0501034_0000636_11254_12033 259

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03976

PPK2

Polyphosphate kinase 2 (PPK2)

20

248

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
3czq-assembly1.cif.gz_D crystal structure of putative polyphosphate kinase 2 from sinorhizobium meliloti 0.9887 1 223
5llf-assembly2.cif.gz_C structure of polyphosphate kinase 2 mutant d117n from francisella tularensis with polyphosphate 0.9853 1 224
5llb-assembly1.cif.gz_C structure of polyphosphate kinase 2 from francisella tularensis with amppch2ppp and polyphosphate 0.9757 4 228
4yeg-assembly2.cif.gz_D characterisation of polyphosphate kinase 2 from the intracellular pathogen francisella tularensis 0.9531 3 227
5lcd-assembly1.cif.gz_A structure of polyphosphate kinase from meiothermus ruber bound to amp 0.9475 4 221
ID Description Score Start End Superfamily
3czqA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9596 1 228 3.40.50.300
5ldbC00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9444 4 221 3.40.50.300
4yegC00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9315 3 228 3.40.50.300
6angA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9183 2 221 3.40.50.300
3czpB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9117 2 221 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A6G3X2D0-F1-model_v4 Polyphosphate kinase 2 0.9951 97 217 GO:0016301
AF-A0A3C1ND58-F1-model_v4 Polyphosphate kinase 2 0.9951 95 224 GO:0006754
GO:0016301
AF-A0A6B3H7W7-F1-model_v4 Polyphosphate kinase 2 0.9936 100 224 GO:0016301
AF-A0A2W4TIZ7-F1-model_v4 ADP/GDP-polyphosphate phosphotransferase (EC 2.7.4.-) (Polyphosphate kinase PPK2) 0.9928 3 224 GO:0006793
GO:0008976
AF-A0A0S8AZX5-F1-model_v4 Polyphosphate kinase 0.9927 71 224 GO:0016301

Feature Viewer

pLDDT pTM Quality
92.41 0.88 High
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Predicted Structure (AlphaFold2)

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