F393093

General Info

Members Datasets Scaffolds Average Seq Length
296 219 592 409

Family's Representative Sequence

Representative Sequence 3300005844|Ga0068862_100237035|Ga0068862_1002370352
Length 471
Sequence MFVSWAAYQLRGRRLDDSMIAGIESEGAMGRDELFEGLPEQRAERSEGAGAPRLRQPQRDQIALRAVDLDSAIGAEHPARVIWAYCERLDLSALYDAIKAREGRPGHPPIDPRLMLALWLYATSQGVGSARALERLCETHDAYRWLCGEVSVNYHTLADFRVAHPELLDELLAQHVATLAASGVIEVATLAQDGLRVRASAGAGSFRREKSLRKILKQTRKLVARLKAELADDPDASNQRIAAAKQRXXXEREARVTAALKKLDELKAERARRAKTNRKQTAKQQEPRASTSDPEARVMKMADGGFRPAYNMQIACAPEQQIVVGVDVATTGSDRGLLRPMLDAVRRRFGWRVRRHLVDGGFTKNSDIEWAAQQGIAVHCPPTRSKHGSDPFVPRPDDGPGMAAWRRRMNSPAGKARYKRRPLVECINARLREWNLRQLTVRGKEKVRSVLLWGALANNILQGHRLAQAAA

Samples

Sample ID Description Type Environment
1 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
4 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
29 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
33 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
34 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
35 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
36 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
37 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
38 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
39 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
40 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
41 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
42 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
43 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
44 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
45 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
46 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
47 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
48 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
51 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
52 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
54 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
55 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
56 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
57 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
58 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
59 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
60 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
61 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
62 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
63 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
64 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
65 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
66 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
67 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
68 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
69 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
96 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
99 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
100 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
101 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
102 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
103 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
104 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
105 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
106 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
107 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
108 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
109 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
110 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
111 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
112 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
113 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
114 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
115 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
116 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
117 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
118 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
119 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
120 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
121 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
122 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
123 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
124 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
125 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
126 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
127 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
128 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
129 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
130 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
131 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
132 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
133 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
134 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
135 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
136 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
137 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
138 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
139 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
140 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
141 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
142 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
143 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
144 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
145 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
146 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
147 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
148 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
149 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
150 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
151 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
152 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
153 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
154 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
155 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
156 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
157 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
158 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
159 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
160 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
161 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
162 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
163 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
164 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
165 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
166 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
167 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
168 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
169 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
170 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
171 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
172 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
173 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
174 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
175 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
176 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
177 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
178 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
179 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
180 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
181 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
182 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
183 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
184 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
185 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
186 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
187 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
188 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
189 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
190 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
191 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
192 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
193 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
194 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
195 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
196 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
197 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
198 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
199 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
200 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
201 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
202 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
203 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
204 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
205 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
206 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
207 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
208 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
209 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
210 2508501009 Bradyrhizobium sp. WSM471 Isolate Nodule
211 2513237098 Bradyrhizobium elkanii WSM2783 Isolate Nodule
212 2529292951 Rhizobium sp. CCGE 510 Isolate Nodule
213 2718217997 Rhizobium phaseoli sv. phaseoli R723 Isolate Nodule
214 2718218233 Rhizobium phaseoli sv. phaseoli R744 Isolate Nodule
215 2841957949 Bradyrhizobium sp. CIR1 Isolate Nodule
216 2842395702 Rhizobium ecuadorense SEMIA 4029 Isolate Nodule
217 2904690495 Bradyrhizobium ivorense CI-1B Isolate Nodule
218 2906643746 Bradyrhizobium genosp. SA-3 Rp7b Isolate Unclassified
219 8005626139 Rhizobium phaseoli Y18 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 94.59
Metatranscriptomes 0
Isolates 5.41

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.81
Nodule 5.07
Rhizoplane 3.38
Rhizosphere 71.28
Stem 0
Stem Tuber 0
Unclassified 6.08

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068862_100237035 3300005844 Bacteria 1657
2 JGI25406J46586_10000267 3300003203 Bacteria 23237
3 JGI25153J46596_10017214 3300003215 Bacteria 2855
4 JGI25407J50210_10017313 3300003373 Bacteria 1870
5 JGI25407J50210_10021835 3300003373 Bacteria 1663
6 Ga0065707_10142354 3300005295 Bacteria 1756
7 Ga0065707_10153500 3300005295 Bacteria 1633
8 Ga0070658_10190903 3300005327 Bacteria 1726
9 Ga0070683_100272529 3300005329 Bacteria 1610
10 Ga0070660_100127480 3300005339 Bacteria 2034
11 Ga0070691_10050013 3300005341 Bacteria 1993
12 Ga0070661_100027539 3300005344 Bacteria 4093
13 Ga0070668_100153117 3300005347 Bacteria 1866
14 Ga0070668_100181394 3300005347 Bacteria 1720
15 Ga0070673_100249235 3300005364 Bacteria 1547
16 Ga0070667_100165739 3300005367 Bacteria 1949
17 Ga0070709_10124756 3300005434 Bacteria 1750
18 Ga0070714_100231255 3300005435 Bacteria 1703
19 Ga0070713_100115784 3300005436 Bacteria 2343
20 Ga0070706_100277056 3300005467 Bacteria 1565
21 Ga0070684_100242351 3300005535 Bacteria 1647
22 Ga0070697_100106539 3300005536 Bacteria 2332
23 Ga0068853_100031968 3300005539 Bacteria 4455
24 Ga0070693_100091660 3300005547 Bacteria 1833
25 Ga0070665_100165544 3300005548 Bacteria 2213
26 Ga0070665_100270517 3300005548 Bacteria 1701
27 Ga0068855_100172533 3300005563 Bacteria 2448
28 Ga0068855_100307217 3300005563 Bacteria 1755
29 Ga0068857_100253801 3300005577 Unclassified 1613
30 Ga0068854_100142424 3300005578 Bacteria 1841
31 Ga0068856_100301318 3300005614 Bacteria 1620
32 Ga0068856_100331063 3300005614 Bacteria 1540
33 Ga0068852_100086496 3300005616 Bacteria 2795
34 Ga0068866_10034821 3300005718 Bacteria 2455
35 Ga0068851_10075407 3300005834 Bacteria 1752
36 Ga0068863_100262144 3300005841 Bacteria 1671
37 Ga0068858_100273861 3300005842 Bacteria 1606
38 Ga0068862_100205969 3300005844 Bacteria 1775
39 Ga0068862_100236513 3300005844 Bacteria 1659
40 Ga0081455_10066523 3300005937 Bacteria 3009
41 Ga0081455_10144149 3300005937 Bacteria 1845
42 Ga0081538_10010053 3300005981 Bacteria 7801
43 Ga0081540_1026436 3300005983 Bacteria 3312
44 Ga0081539_10065887 3300005985 Eukaryota 1966
45 Ga0081539_10076660 3300005985 Bacteria 1771
46 Ga0081539_10093457 3300005985 Unclassified 1549
47 Ga0075363_100053120 3300006048 Bacteria 2164
48 Ga0075363_100087202 3300006048 Bacteria 1714
49 Ga0070715_10077791 3300006163 Bacteria 1498
50 Ga0070716_100117301 3300006173 Bacteria 1660
51 Ga0075367_10056671 3300006178 Unclassified 2328
52 Ga0075367_10104661 3300006178 Bacteria 1733
53 Ga0075366_10054860 3300006195 Bacteria 2367
54 Ga0075366_10072134 3300006195 Bacteria 2057
55 Ga0075370_10114353 3300006353 Bacteria 1568
56 Ga0075428_100000061 3300006844 Bacteria 88478
57 Ga0075428_100250019 3300006844 Bacteria 1911
58 Ga0075428_100344787 3300006844 Bacteria 1599
59 Ga0075434_100172863 3300006871 Bacteria 2180
60 Ga0075434_100311977 3300006871 Bacteria 1593
61 Ga0075429_100139686 3300006880 Bacteria 2121
62 Ga0075429_100164590 3300006880 Bacteria 1943
63 Ga0075429_100244678 3300006880 Bacteria 1571
64 Ga0068865_100166758 3300006881 Bacteria 1685
65 Ga0075436_100137755 3300006914 Unclassified 1714
66 Ga0075436_100175518 3300006914 Bacteria 1513
67 Ga0075435_100179380 3300007076 Bacteria 1789
68 Ga0105240_10305273 3300009093 Bacteria 1819
69 Ga0111539_10262815 3300009094 Bacteria 2009
70 Ga0111539_10264521 3300009094 Bacteria 2002
71 Ga0111539_10290097 3300009094 Bacteria 1904
72 Ga0111539_10300499 3300009094 Bacteria 1868
73 Ga0105245_10186348 3300009098 Bacteria 1985
74 Ga0105247_10064650 3300009101 Bacteria 2274
75 Ga0114129_10117599 3300009147 Unclassified 3662
76 Ga0114129_10367083 3300009147 Bacteria 1903
77 Ga0105248_10286063 3300009177 Bacteria 1856
78 Ga0105237_10037720 3300009545 Bacteria 4884
79 Ga0105237_10239300 3300009545 Bacteria 1816
80 Ga0105238_10181555 3300009551 Bacteria 2081
81 Ga0105249_10217780 3300009553 Bacteria 1877
82 Ga0105249_10258732 3300009553 Bacteria 1728
83 Ga0105239_10285707 3300010375 Bacteria 1858
84 Ga0105239_10346415 3300010375 Bacteria 1677
85 Ga0157370_10206189 3300013104 Bacteria 1823
86 Ga0157369_10226693 3300013105 Bacteria 1955
87 Ga0157369_10277194 3300013105 Unclassified 1746
88 Ga0157374_10237333 3300013296 Bacteria 1792
89 Ga0163162_10263134 3300013306 Bacteria 1856
90 Ga0157375_10312746 3300013308 Bacteria 1735
91 Ga0157380_10160719 3300014326 Unclassified 1952
92 Ga0157379_10104084 3300014968 Bacteria 2547
93 Ga0213872_10020405 3300021361 Bacteria 3054
94 Ga0213874_10010947 3300021377 Bacteria 2285
95 Ga0213874_10019663 3300021377 Bacteria 1841
96 Ga0213875_10058775 3300021388 Bacteria 1800
97 Ga0213875_10064371 3300021388 Bacteria 1713
98 Ga0213875_10085177 3300021388 Bacteria 1474
99 Ga0209758_1048164 3300025297 Unclassified 1518
100 Ga0207697_10063988 3300025315 Bacteria 1533
101 Ga0207710_10065585 3300025900 Bacteria 1655
102 Ga0207647_10075745 3300025904 Bacteria 2024
103 Ga0207699_10128129 3300025906 Bacteria 1651
104 Ga0207705_10133762 3300025909 Unclassified 1847
105 Ga0207684_10203003 3300025910 Bacteria 1710
106 Ga0207707_10004078 3300025912 Bacteria 12936
107 Ga0207695_10248212 3300025913 Bacteria 1680
108 Ga0207660_10003796 3300025917 Bacteria 9840
109 Ga0207657_10108710 3300025919 Bacteria 2292
110 Ga0207652_10022501 3300025921 Bacteria 5215
111 Ga0207694_10204754 3300025924 Unclassified 1606
112 Ga0207700_10132854 3300025928 Bacteria 2035
113 Ga0207664_10113481 3300025929 Bacteria 2256
114 Ga0207665_10111537 3300025939 Bacteria 1922
115 Ga0207665_10174466 3300025939 Bacteria 1554
116 Ga0207711_10232661 3300025941 Bacteria 1688
117 Ga0207667_10318550 3300025949 Unclassified 1588
118 Ga0207712_10145734 3300025961 Bacteria 1823
119 Ga0207668_10215370 3300025972 Bacteria 1538
120 Ga0207658_10141650 3300025986 Bacteria 1946
121 Ga0207703_10211410 3300026035 Bacteria 1730
122 Ga0207639_10235533 3300026041 Unclassified 1589
123 Ga0207702_10198890 3300026078 Bacteria 1856
124 Ga0207702_10293775 3300026078 Bacteria 1540
125 Ga0207641_10239031 3300026088 Unclassified 1691
126 Ga0207698_10186315 3300026142 Bacteria 1844
127 Ga0207698_10274391 3300026142 Unclassified 1556
128 Ga0209588_1037094 3300027671 Bacteria 1569
129 Ga0207428_10162497 3300027907 Bacteria 1695
130 Ga0207428_10191406 3300027907 Bacteria 1542
131 Ga0268266_10258754 3300028379 Bacteria 1612
132 Ga0268266_10262942 3300028379 Bacteria 1599
133 Ga0268265_10215130 3300028380 Bacteria 1677
134 Ga0268265_10244770 3300028380 Bacteria 1584
135 Ga0268265_10245851 3300028380 Bacteria 1581
136 Ga0307515_10202986 3300028794 Bacteria 1852
137 Ga0265330_10049218 3300031235 Bacteria 1852
138 Ga0265332_10052659 3300031238 Bacteria 1747
139 Ga0265328_10022256 3300031239 Bacteria 2413
140 Ga0265340_10062448 3300031247 Bacteria 1779
141 Ga0265340_10068128 3300031247 Bacteria 1690
142 Ga0265331_10063327 3300031250 Bacteria 1742
143 Ga0265316_10075028 3300031344 Bacteria 2601
144 Ga0265316_10152387 3300031344 Bacteria 1731
145 Ga0265316_10190544 3300031344 Bacteria 1523
146 Ga0307513_10178643 3300031456 Bacteria 1989
147 Ga0307513_10189019 3300031456 Bacteria 1913
148 Ga0307508_10034002 3300031616 Bacteria 4597
149 Ga0265314_10109014 3300031711 Bacteria 1763
150 Ga0265314_10116451 3300031711 Bacteria 1689
151 Ga0307405_10103669 3300031731 Bacteria 1913
152 Ga0373934_0040557 3300035086 Bacteria 1836
153 Ga0373923_0056173 3300035111 Bacteria 1661
154 Ga0373936_0051442 3300035113 Bacteria 1667
155 Ga0373945_0031103 3300035116 Bacteria 1885
156 Ga0373954_0052284 3300035118 Bacteria 1919
157 Ga0373943_0072445 3300035170 Bacteria 1747
158 Ga0373924_0043215 3300035410 Bacteria 1850
159 Ga0373935_0137476 3300035692 Bacteria 1647
160 Ga0373935_0150285 3300035692 Bacteria 1580
161 Ga0373927_0114215 3300035695 Bacteria 1760
162 Ga0373933_0131437 3300035724 Bacteria 1574
163 Ga0373947_0087924 3300035725 Bacteria 1933
164 Ga0373947_0142012 3300035725 Bacteria 1540
165 Ga0373937_0238611 3300036401 Bacteria 1712
166 Ga0373925_0126682 3300037068 Bacteria 1987
167 Ga0373925_0169439 3300037068 Bacteria 1723
168 Ga0395899_0115388 3300037312 Bacteria 1927
169 Ga0395900_0204175 3300037418 Bacteria 1998
170 Ga0395898_0292933 3300037466 Bacteria 1552
171 Ga0395905_0213345 3300037471 Bacteria 1808
172 Ga0395905_0244462 3300037471 Bacteria 1676
173 Ga0395905_0290500 3300037471 Bacteria 1521
174 Ga0436364_0788171 3300037853 Bacteria 2717
175 Ga0436364_1208893 3300037853 Bacteria 1967
176 Ga0436364_1452739 3300037853 Bacteria 3344
177 Ga0436364_1459185 3300037853 Bacteria 1747
178 Ga0395901_0352513 3300038443 Bacteria 1518
179 Ga0436365_0523963 3300039437 Bacteria 2337
180 Ga0436365_1772144 3300039437 Bacteria 3643
181 Ga0436360_0870544 3300039438 Bacteria 2112
182 Ga0436361_0091457 3300039447 Bacteria 1974
183 Ga0436361_1196459 3300039447 Bacteria 4926
184 Ga0436363_0376763 3300039450 Bacteria 4706
185 Ga0436363_0696165 3300039450 Bacteria 2119
186 Ga0436363_1028213 3300039450 Bacteria 2140
187 Ga0439465_0014890 3300041413 Bacteria 2426
188 Ga0439465_0020717 3300041413 Bacteria 2060
189 Ga0439465_0028162 3300041413 Unclassified 1780
190 Ga0439431_0027762 3300041997 Bacteria 1392
191 Ga0439445_0028182 3300042004 Bacteria 1446
192 Ga0439448_0023536 3300042005 Bacteria 1922
193 Ga0439455_0009658 3300042012 Bacteria 2100
194 Ga0439434_0028340 3300042435 Bacteria 1695
195 Ga0439435_0015829 3300042436 Bacteria 1882
196 Ga0451577_0245477 3300042876 Bacteria 1620
197 Ga0466969_0065257 3300044656 Bacteria 1760
198 Ga0466961_0137127 3300044693 Bacteria 1533
199 Ga0466968_0042024 3300044735 Bacteria 1931
200 Ga0466970_0094965 3300044765 Bacteria 1620
201 Ga0466960_0101041 3300044901 Bacteria 1485
202 Ga0466959_0159451 3300045049 Bacteria 1586
203 Ga0466958_0119328 3300045836 Bacteria 1650
204 Ga0466967_0238278 3300045976 Bacteria 1734
205 Ga0466967_0261228 3300045976 Bacteria 1656
206 Ga0495638_0100707 3300046460 Bacteria 1728
207 Ga0495653_0136070 3300046463 Unclassified 1733
208 Ga0495580_0043721 3300046472 Bacteria 3187
209 Ga0495582_0071774 3300046473 Bacteria 1915
210 Ga0495666_0028247 3300046526 Bacteria 2760
211 Ga0495654_0072148 3300046530 Bacteria 1635
212 Ga0495588_0066749 3300046674 Bacteria 1867
213 Ga0495647_0018543 3300046681 Bacteria 2479
214 Ga0495647_0039812 3300046681 Bacteria 1783
215 Ga0495658_0078239 3300046683 Bacteria 1935
216 Ga0495672_0051440 3300047320 Bacteria 2426
217 Ga0495672_0090185 3300047320 Bacteria 1685
218 Ga0495686_0119237 3300047472 Bacteria 1574
219 Ga0496102_0210886 3300048905 Bacteria 1831
220 Ga0496104_0139453 3300048907 Bacteria 2330
221 Ga0496105_0146177 3300048908 Bacteria 1944
222 Ga0496107_0223711 3300048910 Bacteria 1400
223 Ga0496110_0220065 3300048913 Bacteria 1726
224 Ga0496110_0284947 3300048913 Bacteria 1505
225 Ga0496112_0000037 3300048915 Bacteria 96876
226 Ga0496112_0267959 3300048915 Bacteria 1656
227 Ga0496113_0141781 3300048916 Bacteria 1891
228 Ga0496115_0230010 3300048918 Bacteria 1529
229 Ga0496117_0083254 3300048920 Bacteria 2092
230 Ga0496118_0131240 3300048921 Bacteria 1608
231 Ga0496119_0040842 3300048922 Bacteria 2962
232 Ga0496119_0067266 3300048922 Bacteria 2113
233 Ga0496120_0095617 3300048923 Bacteria 1579
234 Ga0496122_0073936 3300048925 Bacteria 2413
235 Ga0496123_0106470 3300048926 Bacteria 1615
236 Ga0496125_0139673 3300048928 Bacteria 1687
237 Ga0496126_0218678 3300048929 Bacteria 1601
238 Ga0501034_0201270 3300049571 Bacteria 1949
239 Ga0501036_0242118 3300049572 Bacteria 1513
240 Ga0501042_0183853 3300049578 Bacteria 1508
241 Ga0501075_0082362 3300049591 Bacteria 2437
242 Ga0501076_0218866 3300049592 Bacteria 1556
243 nmdc:mga03683_57551_c1 3300050489 Bacteria 1637
244 nmdc:mga03n38_66399_c1 3300050490 Bacteria 1657
245 nmdc:mga0k408_89501_c1 3300050493 Bacteria 1808
246 nmdc:mga06z11_80763_c1 3300050494 Unclassified 1744
247 nmdc:mga07m45_86108_c1 3300050496 Bacteria 1797
248 nmdc:mga05p37_123299_c1 3300050507 Unclassified 3183
249 nmdc:mga05p37_302073_c1 3300050507 Bacteria 1901
250 nmdc:mga09592_204140_c1 3300050508 Bacteria 1712
251 nmdc:mga09592_208281_c1 3300050508 Bacteria 1694
252 nmdc:mga08y16_226971_c1 3300050511 Bacteria 1932
253 nmdc:mga08y16_255169_c1 3300050511 Bacteria 1812
254 nmdc:mga08y16_275694_c1 3300050511 Bacteria 1736
255 nmdc:mga08y16_300729_c1 3300050511 Bacteria 1654
256 nmdc:mga0n895_275660_c1 3300050512 Bacteria 1706
257 nmdc:mga0rr50_47352_c1 3300050513 Bacteria 3171
258 nmdc:mga08x19_112972_c1 3300050514 Bacteria 1814
259 nmdc:mga08x19_52433_c1 3300050514 Bacteria 2624
260 Ga0500610_0055091 3300053079 Bacteria 2074
261 Ga0495655_0016037 3300053083 Bacteria 1605
262 Ga0495619_0097836 3300053085 Bacteria 1994
263 Ga0500578_0077165 3300053086 Bacteria 2121
264 Ga0500651_0056355 3300053093 Bacteria 2460
265 Ga0500651_0090177 3300053093 Bacteria 1888
266 Ga0500641_0019969 3300053096 Bacteria 2538
267 Ga0500650_0025336 3300053098 Bacteria 2652
268 Ga0500569_027728 3300053109 Bacteria 1563
269 Ga0500572_023603 3300053111 Bacteria 1652
270 Ga0500594_0019278 3300053118 Bacteria 1689
271 Ga0500595_002328 3300053119 Bacteria 9497
272 Ga0500642_0053858 3300053130 Bacteria 1784
273 Ga0500568_0022315 3300053139 Bacteria 2709
274 Ga0500573_0084339 3300053140 Bacteria 1802
275 Ga0500588_0025735 3300053146 Bacteria 1639
276 Ga0500588_0036565 3300053146 Bacteria 1453
277 Ga0500604_0012213 3300053151 Bacteria 2316
278 Ga0500622_0047332 3300053156 Bacteria 2221
279 Ga0500609_005802 3300053731 Bacteria 1687
280 Ga0530510_0128805 3300061734 Bacteria 1861
281 2508543280 2508501009 Bacteria 7784016
282 2508544777 2508501009 Bacteria 7784016
283 2508545544 2508501009 Bacteria 7784016
284 2508545728 2508501009 Bacteria 7784016
285 2508546163 2508501009 Bacteria 7784016
286 2508546310 2508501009 Bacteria 7784016
287 2513675544 2513237098 Bacteria 9902361
288 2513677015 2513237098 Bacteria 9902361
289 2530648493 2529292951 Bacteria 6916614
290 2719668286 2718217997 Bacteria 6740740
291 2720617546 2718218233 Bacteria 6662049
292 2841966183 2841957949 Bacteria 8652217
293 2842402199 2842395702 Bacteria 6780583
294 2904697684 2904690495 Bacteria 9412302
295 2906652468 2906643746 Bacteria 8722424
296 8005627943 8005626139 Bacteria 6534237
297 Ga0068862_100237035
298 JGI25406J46586_10000267
299 JGI25153J46596_10017214
300 JGI25407J50210_10017313
301 JGI25407J50210_10021835
302 Ga0065707_10142354
303 Ga0065707_10153500
304 Ga0070658_10190903
305 Ga0070683_100272529
306 Ga0070660_100127480
307 Ga0070691_10050013
308 Ga0070661_100027539
309 Ga0070668_100153117
310 Ga0070668_100181394
311 Ga0070673_100249235
312 Ga0070667_100165739
313 Ga0070709_10124756
314 Ga0070714_100231255
315 Ga0070713_100115784
316 Ga0070706_100277056
317 Ga0070684_100242351
318 Ga0070697_100106539
319 Ga0068853_100031968
320 Ga0070693_100091660
321 Ga0070665_100165544
322 Ga0070665_100270517
323 Ga0068855_100172533
324 Ga0068855_100307217
325 Ga0068857_100253801
326 Ga0068854_100142424
327 Ga0068856_100301318
328 Ga0068856_100331063
329 Ga0068852_100086496
330 Ga0068866_10034821
331 Ga0068851_10075407
332 Ga0068863_100262144
333 Ga0068858_100273861
334 Ga0068862_100205969
335 Ga0068862_100236513
336 Ga0081455_10066523
337 Ga0081455_10144149
338 Ga0081538_10010053
339 Ga0081540_1026436
340 Ga0081539_10065887
341 Ga0081539_10076660
342 Ga0081539_10093457
343 Ga0075363_100053120
344 Ga0075363_100087202
345 Ga0070715_10077791
346 Ga0070716_100117301
347 Ga0075367_10056671
348 Ga0075367_10104661
349 Ga0075366_10054860
350 Ga0075366_10072134
351 Ga0075370_10114353
352 Ga0075428_100000061
353 Ga0075428_100250019
354 Ga0075428_100344787
355 Ga0075434_100172863
356 Ga0075434_100311977
357 Ga0075429_100139686
358 Ga0075429_100164590
359 Ga0075429_100244678
360 Ga0068865_100166758
361 Ga0075436_100137755
362 Ga0075436_100175518
363 Ga0075435_100179380
364 Ga0105240_10305273
365 Ga0111539_10262815
366 Ga0111539_10264521
367 Ga0111539_10290097
368 Ga0111539_10300499
369 Ga0105245_10186348
370 Ga0105247_10064650
371 Ga0114129_10117599
372 Ga0114129_10367083
373 Ga0105248_10286063
374 Ga0105237_10037720
375 Ga0105237_10239300
376 Ga0105238_10181555
377 Ga0105249_10217780
378 Ga0105249_10258732
379 Ga0105239_10285707
380 Ga0105239_10346415
381 Ga0157370_10206189
382 Ga0157369_10226693
383 Ga0157369_10277194
384 Ga0157374_10237333
385 Ga0163162_10263134
386 Ga0157375_10312746
387 Ga0157380_10160719
388 Ga0157379_10104084
389 Ga0213872_10020405
390 Ga0213874_10010947
391 Ga0213874_10019663
392 Ga0213875_10058775
393 Ga0213875_10064371
394 Ga0213875_10085177
395 Ga0209758_1048164
396 Ga0207697_10063988
397 Ga0207710_10065585
398 Ga0207647_10075745
399 Ga0207699_10128129
400 Ga0207705_10133762
401 Ga0207684_10203003
402 Ga0207707_10004078
403 Ga0207695_10248212
404 Ga0207660_10003796
405 Ga0207657_10108710
406 Ga0207652_10022501
407 Ga0207694_10204754
408 Ga0207700_10132854
409 Ga0207664_10113481
410 Ga0207665_10111537
411 Ga0207665_10174466
412 Ga0207711_10232661
413 Ga0207667_10318550
414 Ga0207712_10145734
415 Ga0207668_10215370
416 Ga0207658_10141650
417 Ga0207703_10211410
418 Ga0207639_10235533
419 Ga0207702_10198890
420 Ga0207702_10293775
421 Ga0207641_10239031
422 Ga0207698_10186315
423 Ga0207698_10274391
424 Ga0209588_1037094
425 Ga0207428_10162497
426 Ga0207428_10191406
427 Ga0268266_10258754
428 Ga0268266_10262942
429 Ga0268265_10215130
430 Ga0268265_10244770
431 Ga0268265_10245851
432 Ga0307515_10202986
433 Ga0265330_10049218
434 Ga0265332_10052659
435 Ga0265328_10022256
436 Ga0265340_10062448
437 Ga0265340_10068128
438 Ga0265331_10063327
439 Ga0265316_10075028
440 Ga0265316_10152387
441 Ga0265316_10190544
442 Ga0307513_10178643
443 Ga0307513_10189019
444 Ga0307508_10034002
445 Ga0265314_10109014
446 Ga0265314_10116451
447 Ga0307405_10103669
448 Ga0373934_0040557
449 Ga0373923_0056173
450 Ga0373936_0051442
451 Ga0373945_0031103
452 Ga0373954_0052284
453 Ga0373943_0072445
454 Ga0373924_0043215
455 Ga0373935_0137476
456 Ga0373935_0150285
457 Ga0373927_0114215
458 Ga0373933_0131437
459 Ga0373947_0087924
460 Ga0373947_0142012
461 Ga0373937_0238611
462 Ga0373925_0126682
463 Ga0373925_0169439
464 Ga0395899_0115388
465 Ga0395900_0204175
466 Ga0395898_0292933
467 Ga0395905_0213345
468 Ga0395905_0244462
469 Ga0395905_0290500
470 Ga0436364_0788171
471 Ga0436364_1208893
472 Ga0436364_1452739
473 Ga0436364_1459185
474 Ga0395901_0352513
475 Ga0436365_0523963
476 Ga0436365_1772144
477 Ga0436360_0870544
478 Ga0436361_0091457
479 Ga0436361_1196459
480 Ga0436363_0376763
481 Ga0436363_0696165
482 Ga0436363_1028213
483 Ga0439465_0014890
484 Ga0439465_0020717
485 Ga0439465_0028162
486 Ga0439431_0027762
487 Ga0439445_0028182
488 Ga0439448_0023536
489 Ga0439455_0009658
490 Ga0439434_0028340
491 Ga0439435_0015829
492 Ga0451577_0245477
493 Ga0466969_0065257
494 Ga0466961_0137127
495 Ga0466968_0042024
496 Ga0466970_0094965
497 Ga0466960_0101041
498 Ga0466959_0159451
499 Ga0466958_0119328
500 Ga0466967_0238278
501 Ga0466967_0261228
502 Ga0495638_0100707
503 Ga0495653_0136070
504 Ga0495580_0043721
505 Ga0495582_0071774
506 Ga0495666_0028247
507 Ga0495654_0072148
508 Ga0495588_0066749
509 Ga0495647_0018543
510 Ga0495647_0039812
511 Ga0495658_0078239
512 Ga0495672_0051440
513 Ga0495672_0090185
514 Ga0495686_0119237
515 Ga0496102_0210886
516 Ga0496104_0139453
517 Ga0496105_0146177
518 Ga0496107_0223711
519 Ga0496110_0220065
520 Ga0496110_0284947
521 Ga0496112_0000037
522 Ga0496112_0267959
523 Ga0496113_0141781
524 Ga0496115_0230010
525 Ga0496117_0083254
526 Ga0496118_0131240
527 Ga0496119_0040842
528 Ga0496119_0067266
529 Ga0496120_0095617
530 Ga0496122_0073936
531 Ga0496123_0106470
532 Ga0496125_0139673
533 Ga0496126_0218678
534 Ga0501034_0201270
535 Ga0501036_0242118
536 Ga0501042_0183853
537 Ga0501075_0082362
538 Ga0501076_0218866
539 nmdc:mga03683_57551_c1
540 nmdc:mga03n38_66399_c1
541 nmdc:mga0k408_89501_c1
542 nmdc:mga06z11_80763_c1
543 nmdc:mga07m45_86108_c1
544 nmdc:mga05p37_123299_c1
545 nmdc:mga05p37_302073_c1
546 nmdc:mga09592_204140_c1
547 nmdc:mga09592_208281_c1
548 nmdc:mga08y16_226971_c1
549 nmdc:mga08y16_255169_c1
550 nmdc:mga08y16_275694_c1
551 nmdc:mga08y16_300729_c1
552 nmdc:mga0n895_275660_c1
553 nmdc:mga0rr50_47352_c1
554 nmdc:mga08x19_112972_c1
555 nmdc:mga08x19_52433_c1
556 Ga0500610_0055091
557 Ga0495655_0016037
558 Ga0495619_0097836
559 Ga0500578_0077165
560 Ga0500651_0056355
561 Ga0500651_0090177
562 Ga0500641_0019969
563 Ga0500650_0025336
564 Ga0500569_027728
565 Ga0500572_023603
566 Ga0500594_0019278
567 Ga0500595_002328
568 Ga0500642_0053858
569 Ga0500568_0022315
570 Ga0500573_0084339
571 Ga0500588_0025735
572 Ga0500588_0036565
573 Ga0500604_0012213
574 Ga0500622_0047332
575 Ga0500609_005802
576 Ga0530510_0128805
577 2508543280
578 2508544777
579 2508545544
580 2508545728
581 2508546163
582 2508546310
583 2513675544
584 2513677015
585 2530648493
586 2719668286
587 2720617546
588 2841966183
589 2842402199
590 2904697684
591 2906652468
592 8005627943

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05598

DUF772

Transposase domain (DUF772)

106

175

0.97

PF01609

DDE_Tnp_1

Transposase DDE domain

275

460

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
5cz2-assembly1.cif.gz_A crystal structure of a two-domain fragment of mmtv integrase 0.7096 223 292
5cz2-assembly3.cif.gz_E crystal structure of a two-domain fragment of mmtv integrase 0.7092 223 292
4dmu-assembly5.cif.gz_J crystal structure of the von willebrand factor a3 domain in complex with a collagen iii derived triple-helical peptide 0.6807 254 292
3ff4-assembly1.cif.gz_A crystal structure of uncharacterized protein chu_1412 0.6436 247 294
3t5c-assembly2.cif.gz_B crystal structure of n-terminal domain of facl13 from mycobacterium tuberculosis in different space group c2 0.6352 254 295
ID Description Score Start End Superfamily
af_Q2FW68_1_95_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.8209 222 300 3.30.420.10
af_Q2FXN1_1_235_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.786 213 371 3.30.420.10
af_P75741_104_321_3.90.350.10 Alpha Beta;Alpha-Beta Complex;Transposase Inhibitor Protein From Tn5; Chain A, domain 1;Transposase Inhibitor Protein From Tn5; Chain A, domain 1 0.7663 160 295 3.90.350.10
af_Q9FI63_292_491_3.80.10.10 Alpha Beta;Alpha-Beta Horseshoe;Leucine-rich repeat, LRR (right-handed beta-alpha superhelix);Ribonuclease Inhibitor 0.7482 254 292 3.80.10.10
af_Q9UAW8_52_341_3.20.20.190 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphatidylinositol (PI) phosphodiesterase 0.7476 265 300 3.20.20.190
ID Description Score Start End GO Terms
AF-A0A7T7Z2S6-F1-model_v4 deleted 0.9912 226 380
AF-A0A7W6VSE5-F1-model_v4 Transposase IS4-like domain-containing protein 0.9795 200 382 GO:0003677
GO:0004803
GO:0006313
AF-A0A1J5QLY4-F1-model_v4 Transposase DDE domain protein 0.9672 211 378 GO:0003677
GO:0004803
GO:0006313
AF-A0A1F4QDN6-F1-model_v4 Transposase DDE domain-containing protein 0.9544 211 380
AF-A6GJF2-F1-model_v4 Transposase, IS4 family protein 0.9507 200 383 GO:0003677
GO:0004803
GO:0006313

Map