F391556

General Info

Members Datasets Scaffolds Average Seq Length
293 194 266 533

Family's Representative Sequence

Representative Sequence 3300027876|Ga0209974_10003424|Ga0209974_100034243
Length 571
Sequence MTQPATVVIGFIGTQLDSGQGAGRWEKWRPTISMAQHPDLEVARFELFYTARFENLAQQVRKDLAAASPNSQVKLIALDINDPWDFGEVYAALYDWVRSYPFDTERERYWAHITTGTHVAQICTFLLVESRLLPGLLLQTAPPKKQRQGDPGSYELIDLDLQRYSVIAQRFEQEQGDAVAFLKSGIATRNARFNALIAEIERVAVRSRAPILLAGPTGAGKSFLARRMYELKKTRHQMSGPFVEVNCATLRGDSAASTLFGHKKGSFTGAAADRAGLLRSADQGVLFLDEIGELGSDEQAMLLKAIEEKRFFPMGADREVESDFQLIAGTNRDLRHEVAQGHFRDDLFARINLWTYDLPGLAQRPEDIEPNVEHLLARSVAETGRAVRFSAEARAQYLKFAQSPEALWSANFRDLGASVTRLATLAEGGRISTELVTAEIARLRWMWQRDTSPEPAAGIDLNALLGDQATAALDLFDRLQLEAVLRVCHDSRTLSEAGRKLFHATRTQRSVVNDADRLRKYLARFGLSWRMSLMKTSGSFQFDSTSGTIAGVGSARQSRPMSSKCRMSTTS

Samples

Sample ID Description Type Environment
1 2513020051 Variovorax sp. CF313 Isolate Rhizosphere
2 2551306352 Acinetobacter sp. GG2 Isolate Rhizosphere
3 2585428057 Methylibium sp. YR605 Isolate Rhizosphere
4 2585428058 Methylibium sp. CF468 Isolate Rhizosphere
5 2639762793 Acinetobacter calcoaceticus GK1 Isolate Rhizosphere
6 2643221592 Rhizobacter sp. Root16D2 Isolate Unclassified
7 2643221625 Rhizobacter sp. Root29 Isolate Unclassified
8 2643221639 Pelomonas sp. Root1217 Isolate Unclassified
9 2643221648 Rhizobacter sp. Root1238 Isolate Unclassified
10 2643221665 Acinetobacter sp. Root1280 Isolate Unclassified
11 2643221672 Variovorax sp. Root434 Isolate Unclassified
12 2718218334 Luteibacter rhizovicinus LJ96 Isolate Rhizosphere
13 2773857761 Acinetobacter sp. 3664 Isolate Unclassified
14 2773857770 Acinetobacter sp. 3636 Isolate Unclassified
15 2842677519 Variovorax sp. R-72495 Isolate Unclassified
16 2842914999 Luteibacter sp. R-72151 Isolate Unclassified
17 2885192300 Variovorax sp. MHTC-1 Isolate Rhizosphere
18 2904449895 Variovorax sp. 1763 Isolate Rhizosphere
19 2904456579 Variovorax sp. 2002 Isolate Unclassified
20 2919462493 Variovorax sp. 3319 Isolate Rhizosphere
21 2919506607 Acinetobacter sp. 3657 Isolate Unclassified
22 2928515477 Acinetobacter bereziniae 1375 Isolate Rhizosphere
23 2929520902 Variovorax beijingensis 502 Isolate Unclassified
24 2945945610 Variovorax paradoxus W1I18 Isolate Rhizosphere
25 2945984333 Variovorax sp. W2I14 Isolate Rhizosphere
26 2989392574 Methylomonas rhizoryzae GJ1 Isolate Unclassified
27 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
28 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
29 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
30 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
31 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
32 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
33 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
34 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
35 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
36 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
37 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
38 3300005272 Switchgrass rhizosphere microbial communities from Buena Vista Grasslands Wildlife Area, Michigan, USA - BV2.1 v1 Metagenome Rhizosphere
39 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
40 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
41 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
42 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
43 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
44 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
45 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
46 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
47 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
48 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
49 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
50 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
51 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
52 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
53 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
54 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
55 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
56 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
57 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
58 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
59 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
61 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
62 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
63 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
64 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
65 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
66 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
67 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
68 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
69 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
70 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
71 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
72 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
73 3300012500 Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.old.080610 Metagenome Rhizosphere
74 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
75 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
76 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
77 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
78 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
79 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
80 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
81 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
82 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
83 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
84 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
86 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
87 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
88 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
89 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
90 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
91 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
92 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
93 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
94 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
95 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
96 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
97 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
98 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
99 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
100 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
101 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
123 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
124 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
125 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
128 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
129 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
130 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
131 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
132 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
133 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
134 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
135 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
136 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
137 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
138 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
139 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
140 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
141 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
142 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
143 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
144 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
145 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
146 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
147 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
148 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
149 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
150 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
151 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
152 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
153 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
154 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
155 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
156 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
157 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
158 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
159 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
160 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
161 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
162 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
163 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
164 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
165 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
166 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
167 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
168 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
169 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
170 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
171 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
172 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
173 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
174 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
175 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
176 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
177 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
178 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
179 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
180 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
181 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
182 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
183 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
184 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
185 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
186 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
187 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
188 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
189 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
190 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
191 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
192 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
193 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
194 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.13
Metatranscriptomes 0
Isolates 8.87

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 27.3
Nodule 0.68
Rhizoplane 1.71
Rhizosphere 54.27
Stem 0
Stem Tuber 0
Unclassified 16.04

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10002492 3300001989 Bacteria 7108
2 JGI24737J22298_10008763 3300001990 Bacteria 3377
3 JGI24735J21928_10001411 3300002067 Bacteria 8484
4 JGI25152J39213_1002978 3300002773 Bacteria 6019
5 JGI25153J46596_10026017 3300003215 Bacteria 2080
6 Ga0055535_1000047 3300003761 Bacteria 139836
7 Ga0055529_1000148 3300003763 Bacteria 100809
8 Ga0055524_1000061 3300003775 Bacteria 135241
9 Ga0055530_10000636 3300003791 Bacteria 30219
10 Ga0055530_10019305 3300003791 Bacteria 2067
11 Ga0055540_1000212 3300003792 Bacteria 54979
12 Ga0055540_1005318 3300003792 Bacteria 5466
13 Ga0055540_1007196 3300003792 Bacteria 4256
14 Ga0055531_10003307 3300003794 Bacteria 10320
15 Ga0065703_1000106 3300005272 Bacteria 45533
16 Ga0070690_100000968 3300005330 Bacteria 14599
17 Ga0070669_100012110 3300005353 Bacteria 6122
18 Ga0070673_100056357 3300005364 Bacteria 3101
19 Ga0068867_100000097 3300005459 Bacteria 55623
20 Ga0068853_100019094 3300005539 Bacteria 5679
21 Ga0068853_100174287 3300005539 Bacteria 1947
22 Ga0070665_100000513 3300005548 Bacteria 55553
23 Ga0070665_100031517 3300005548 Bacteria 5336
24 Ga0068855_100019458 3300005563 Bacteria 8157
25 Ga0068855_100026487 3300005563 Bacteria 6936
26 Ga0068857_100000562 3300005577 Bacteria 27091
27 Ga0068854_100016565 3300005578 Bacteria 4917
28 Ga0068852_100079387 3300005616 Bacteria 2907
29 Ga0068859_100015884 3300005617 Bacteria 7565
30 Ga0068861_100018394 3300005719 Bacteria 4979
31 Ga0068863_100020057 3300005841 Bacteria 6395
32 Ga0068858_100003891 3300005842 Bacteria 14748
33 Ga0068858_100020821 3300005842 Bacteria 6131
34 Ga0081538_10032878 3300005981 Bacteria 3464
35 Ga0075368_10033719 3300006042 Bacteria 1993
36 Ga0075363_100020592 3300006048 Bacteria 3309
37 Ga0075363_100035628 3300006048 Bacteria 2606
38 Ga0075362_10004701 3300006177 Bacteria 4928
39 Ga0075366_10005045 3300006195 Bacteria 7135
40 Ga0075366_10008470 3300006195 Bacteria 5720
41 Ga0075366_10012038 3300006195 Bacteria 4899
42 Ga0075366_10048921 3300006195 Bacteria 2508
43 Ga0075370_10003729 3300006353 Bacteria 7294
44 Ga0097620_100015885 3300006931 Bacteria 7565
45 Ga0079104_1000093 3300006946 Bacteria 130633
46 Ga0105251_10006521 3300009011 Bacteria 7409
47 Ga0105251_10047468 3300009011 Bacteria 2063
48 Ga0105251_10047639 3300009011 Bacteria 2059
49 Ga0105240_10009929 3300009093 Bacteria 13423
50 Ga0105240_10010614 3300009093 Bacteria 12941
51 Ga0105240_10026373 3300009093 Bacteria 7623
52 Ga0105240_10049286 3300009093 Bacteria 5318
53 Ga0105240_10085326 3300009093 Bacteria 3869
54 Ga0105240_10104494 3300009093 Bacteria 3440
55 Ga0105240_10233319 3300009093 Bacteria 2137
56 Ga0111539_10000057 3300009094 Bacteria 114860
57 Ga0105247_10000503 3300009101 Bacteria 32160
58 Ga0114129_10425044 3300009147 Bacteria 1747
59 Ga0105243_10000010 3300009148 Bacteria 316672
60 Ga0105243_10000316 3300009148 Bacteria 53266
61 Ga0105243_10011976 3300009148 Bacteria 6557
62 Ga0105243_10031313 3300009148 Bacteria 4101
63 Ga0105248_10193528 3300009177 Bacteria 2291
64 Ga0105237_10000112 3300009545 Bacteria 114192
65 Ga0105237_10011669 3300009545 Bacteria 9297
66 Ga0105237_10036771 3300009545 Bacteria 4953
67 Ga0105237_10039689 3300009545 Bacteria 4751
68 Ga0105237_10130271 3300009545 Bacteria 2510
69 Ga0105238_10003393 3300009551 Bacteria 15900
70 Ga0105249_10001247 3300009553 Bacteria 22341
71 Ga0105239_10009282 3300010375 Bacteria 11120
72 Ga0105239_10012683 3300010375 Bacteria 9376
73 Ga0105239_10058412 3300010375 Bacteria 4233
74 Ga0105246_10094794 3300011119 Bacteria 2159
75 Ga0157314_1000413 3300012500 Bacteria 4254
76 Ga0157371_10084098 3300013102 Bacteria 2253
77 Ga0157369_10031079 3300013105 Bacteria 5885
78 Ga0163162_10095129 3300013306 Bacteria 3065
79 Ga0157377_10000006 3300014745 Bacteria 419853
80 Ga0182006_1000779 3300015261 Bacteria 21592
81 Ga0182007_10000246 3300015262 Bacteria 36410
82 Ga0163161_10000521 3300017792 Bacteria 31378
83 Ga0207427_100391 3300025231 Bacteria 26259
84 Ga0209258_100072 3300025242 Bacteria 274355
85 Ga0209258_100341 3300025242 Bacteria 68437
86 Ga0207425_1000133 3300025245 Bacteria 67802
87 Ga0209677_103761 3300025253 Bacteria 4725
88 Ga0209759_1001196 3300025256 Bacteria 16168
89 Ga0209129_1000186 3300025258 Bacteria 85793
90 Ga0209565_1000190 3300025263 Bacteria 75207
91 Ga0209455_1000053 3300025272 Bacteria 365949
92 Ga0209673_1000393 3300025273 Bacteria 78531
93 Ga0209673_1008284 3300025273 Bacteria 4641
94 Ga0209130_1000433 3300025284 Bacteria 44915
95 Ga0209130_1000979 3300025284 Bacteria 22401
96 Ga0209675_1000300 3300025291 Bacteria 45407
97 Ga0209676_1000069 3300025292 Bacteria 312462
98 Ga0209676_1002454 3300025292 Bacteria 13139
99 Ga0209676_1002619 3300025292 Bacteria 12295
100 Ga0209025_1000947 3300025294 Bacteria 44024
101 Ga0209564_1000417 3300025295 Bacteria 74808
102 Ga0209564_1000575 3300025295 Bacteria 58260
103 Ga0209758_1000092 3300025297 Bacteria 241910
104 Ga0209758_1000177 3300025297 Bacteria 142824
105 Ga0209050_1000023 3300025298 Bacteria 537172
106 Ga0209050_1000720 3300025298 Bacteria 48448
107 Ga0209050_1003727 3300025298 Bacteria 10962
108 Ga0209256_1000030 3300025299 Bacteria 414828
109 Ga0209256_1000094 3300025299 Bacteria 208177
110 Ga0207426_1000084 3300025302 Bacteria 298123
111 Ga0207426_1000715 3300025302 Bacteria 38612
112 Ga0209051_1000017 3300025303 Bacteria 537172
113 Ga0209051_1000099 3300025303 Bacteria 165161
114 Ga0209051_1000207 3300025303 Bacteria 103683
115 Ga0209051_1003021 3300025303 Bacteria 11400
116 Ga0209257_1000041 3300025304 Bacteria 537172
117 Ga0209257_1000249 3300025304 Bacteria 124522
118 Ga0209257_1000752 3300025304 Bacteria 48949
119 Ga0209257_1003968 3300025304 Bacteria 11976
120 Ga0209257_1007832 3300025304 Bacteria 6317
121 Ga0207655_1001468 3300025728 Bacteria 21769
122 Ga0207655_1001487 3300025728 Bacteria 21477
123 Ga0207655_1004621 3300025728 Bacteria 9673
124 Ga0207713_1006708 3300025735 Bacteria 6957
125 Ga0207710_10000005 3300025900 Bacteria 607066
126 Ga0207695_10004175 3300025913 Bacteria 19845
127 Ga0207695_10008170 3300025913 Bacteria 13149
128 Ga0207695_10035810 3300025913 Bacteria 5375
129 Ga0207695_10044543 3300025913 Bacteria 4718
130 Ga0207695_10054868 3300025913 Bacteria 4157
131 Ga0207695_10206509 3300025913 Bacteria 1877
132 Ga0207671_10000009 3300025914 Bacteria 724862
133 Ga0207671_10004922 3300025914 Bacteria 12539
134 Ga0207671_10007645 3300025914 Bacteria 9338
135 Ga0207681_10004476 3300025923 Bacteria 8603
136 Ga0207694_10053768 3300025924 Bacteria 3123
137 Ga0207687_10108226 3300025927 Bacteria 2058
138 Ga0207706_10003225 3300025933 Bacteria 15663
139 Ga0207706_10004447 3300025933 Bacteria 13172
140 Ga0207706_10013847 3300025933 Bacteria 7316
141 Ga0207709_10000001 3300025935 Bacteria 2228154
142 Ga0207709_10000698 3300025935 Bacteria 27097
143 Ga0207709_10003570 3300025935 Bacteria 9196
144 Ga0207709_10015453 3300025935 Bacteria 4233
145 Ga0207667_10002016 3300025949 Bacteria 25491
146 Ga0207667_10006072 3300025949 Bacteria 14686
147 Ga0207667_10108686 3300025949 Bacteria 2861
148 Ga0207667_10113126 3300025949 Bacteria 2799
149 Ga0207640_10022394 3300025981 Bacteria 3781
150 Ga0207703_10000563 3300026035 Bacteria 38142
151 Ga0207703_10009012 3300026035 Bacteria 7858
152 Ga0207703_10027115 3300026035 Bacteria 4512
153 Ga0207639_10067566 3300026041 Bacteria 2782
154 Ga0207678_10043891 3300026067 Bacteria 3868
155 Ga0207702_10040372 3300026078 Bacteria 3913
156 Ga0207641_10010219 3300026088 Bacteria 7718
157 Ga0207648_10006761 3300026089 Bacteria 11369
158 Ga0207674_10000145 3300026116 Bacteria 83147
159 Ga0207675_100017085 3300026118 Bacteria 6776
160 Ga0207683_10064103 3300026121 Bacteria 3238
161 Ga0209281_1000084 3300027111 Bacteria 254215
162 Ga0209974_10003424 3300027876 Bacteria 5727
163 Ga0207428_10000996 3300027907 Bacteria 31420
164 Ga0268266_10002920 3300028379 Bacteria 17679
165 Ga0268266_10004664 3300028379 Bacteria 13062
166 Ga0268266_10083213 3300028379 Bacteria 2793
167 Ga0268264_10001647 3300028381 Bacteria 20631
168 Ga0265336_10000029 3300028666 Bacteria 178897
169 Ga0307517_10000024 3300028786 Bacteria 185597
170 Ga0307515_10053921 3300028794 Bacteria 5916
171 Ga0307515_10089421 3300028794 Bacteria 3878
172 Ga0307515_10157019 3300028794 Bacteria 2341
173 Ga0265324_10000372 3300029957 Bacteria 32416
174 Ga0307511_10014184 3300030521 Bacteria 7756
175 Ga0307512_10034237 3300030522 Bacteria 4350
176 Ga0316181_1059055 3300030744 Bacteria 4387
177 Ga0307513_10023105 3300031456 Bacteria 7277
178 Ga0307508_10031089 3300031616 Bacteria 4827
179 Ga0307514_10000592 3300031649 Bacteria 68079
180 Ga0307514_10026075 3300031649 Bacteria 4726
181 Ga0307516_10001053 3300031730 Bacteria 38382
182 Ga0307516_10020470 3300031730 Bacteria 6834
183 Ga0307405_10031517 3300031731 Bacteria 3122
184 Ga0307406_10004365 3300031901 Bacteria 7692
185 Ga0307510_10000008 3300033180 Bacteria 433990
186 Ga0307510_10004129 3300033180 Bacteria 17045
187 Ga0395905_0010204 3300037471 Bacteria 9153
188 Ga0395905_0038802 3300037471 Bacteria 4467
189 Ga0400484_06002 3300038725 Bacteria 2536
190 Ga0400484_31125 3300038725 Bacteria 6395
191 Ga0400488_28982 3300038741 Bacteria 7915
192 Ga0400487_02611 3300039110 Bacteria 4160
193 Ga0436361_0698026 3300039447 Bacteria 6434
194 Ga0439466_0003032 3300041411 Bacteria 6552
195 Ga0450908_000001 3300042184 Bacteria 100479
196 Ga0450893_0001767 3300042532 Bacteria 3326
197 Ga0466966_0101346 3300044684 Bacteria 1780
198 Ga0466961_0089189 3300044693 Bacteria 1947
199 Ga0466964_0003097 3300044706 Bacteria 6050
200 Ga0466960_0005611 3300044901 Bacteria 4980
201 Ga0495627_005457 3300046453 Bacteria 5124
202 Ga0495627_019514 3300046453 Bacteria 2272
203 Ga0495639_0006918 3300046475 Bacteria 4871
204 Ga0495583_0001679 3300046506 Bacteria 21403
205 Ga0495583_0027963 3300046506 Bacteria 2777
206 Ga0495606_0000329 3300046507 Bacteria 81972
207 Ga0495606_0034604 3300046507 Bacteria 3467
208 Ga0495620_0002540 3300046515 Bacteria 10563
209 Ga0495632_0004129 3300046519 Bacteria 9981
210 Ga0495632_0006599 3300046519 Bacteria 7425
211 Ga0495632_0065935 3300046519 Bacteria 1748
212 Ga0495648_0007414 3300046524 Bacteria 8778
213 Ga0495652_0087301 3300046529 Bacteria 2559
214 Ga0495597_0005059 3300046542 Bacteria 7055
215 Ga0495668_0017646 3300046616 Bacteria 4136
216 Ga0495625_0000045 3300046660 Bacteria 202475
217 Ga0495661_0000643 3300046665 Bacteria 35454
218 Ga0495670_0004986 3300046691 Bacteria 6524
219 Ga0495649_0000942 3300046694 Bacteria 22968
220 Ga0495687_000705 3300047443 Bacteria 37210
221 Ga0495673_0000161 3300047469 Bacteria 115632
222 Ga0495686_0000176 3300047472 Bacteria 121953
223 Ga0495686_0005675 3300047472 Bacteria 9763
224 Ga0495686_0022572 3300047472 Bacteria 4164
225 Ga0496102_0005601 3300048905 Bacteria 10663
226 Ga0496102_0015371 3300048905 Bacteria 6666
227 Ga0496102_0034556 3300048905 Bacteria 4547
228 Ga0496106_0001623 3300048909 Bacteria 16907
229 Ga0496114_0029765 3300048917 Bacteria 4489
230 Ga0496117_0000044 3300048920 Bacteria 301076
231 Ga0496118_0000025 3300048921 Bacteria 379363
232 Ga0496118_0073139 3300048921 Bacteria 2457
233 Ga0496119_0002747 3300048922 Bacteria 18941
234 Ga0496119_0003173 3300048922 Bacteria 17253
235 Ga0496120_0000098 3300048923 Bacteria 145165
236 Ga0496120_0021651 3300048923 Bacteria 4059
237 Ga0496121_0019728 3300048924 Bacteria 6724
238 Ga0496121_0027924 3300048924 Bacteria 5270
239 Ga0496125_0000726 3300048928 Bacteria 54615
240 Ga0496125_0028447 3300048928 Bacteria 5048
241 Ga0496126_0065307 3300048929 Bacteria 3257
242 Ga0496126_0097771 3300048929 Bacteria 2572
243 Ga0496126_0139550 3300048929 Bacteria 2088
244 nmdc:mga03683_8591_c1 3300050489 Bacteria 3596
245 nmdc:mga03n38_10408_c1 3300050490 Bacteria 3419
246 nmdc:mga00v17_99350_c1 3300050491 Bacteria 1836
247 nmdc:mga0k408_23651_c1 3300050493 Bacteria 3469
248 nmdc:mga0k408_25312_c1 3300050493 Bacteria 3361
249 nmdc:mga0k408_2868_c1 3300050493 Bacteria 9151
250 nmdc:mga0k408_35347_c1 3300050493 Bacteria 2866
251 nmdc:mga0k408_512_c1 3300050493 Bacteria 21330
252 nmdc:mga0k408_8409_c1 3300050493 Bacteria 5538
253 nmdc:mga06z11_10899_c1 3300050494 Bacteria 3895
254 nmdc:mga07m45_15971_c1 3300050496 Bacteria 4016
255 nmdc:mga08y16_162_c1 3300050511 Bacteria 58005
256 Ga0500578_0000342 3300053086 Bacteria 56948
257 Ga0500583_0067403 3300053092 Bacteria 1705
258 Ga0500595_002908 3300053119 Bacteria 8197
259 Ga0500568_0005777 3300053139 Bacteria 6330
260 Ga0500588_0012671 3300053146 Bacteria 2097
261 Ga0500622_0000091 3300053156 Bacteria 93307
262 Ga0500622_0002544 3300053156 Bacteria 13077
263 Ga0500622_0002832 3300053156 Bacteria 12168
264 Ga0500636_0015863 3300053177 Bacteria 4438
265 Ga0500645_000304 3300053730 Bacteria 35240
266 Ga0500645_001403 3300053730 Bacteria 12293

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300009177 Ga0105248_10193528 Ga0105248_101935282 419
2 3300005364 Ga0070673_100056357 Ga0070673_1000563572 420
3 3300025935 Ga0207709_10003570 Ga0207709_100035706 468
4 3300046453 Ga0495627_019514 Ga0495627_019514_691_2181 468
5 3300025295 Ga0209564_1000575 Ga0209564_100057525 483
6 3300048922 Ga0496119_0003173 Ga0496119_0003173_9434_11050 494
7 3300048923 Ga0496120_0000098 Ga0496120_0000098_94712_96328 494
8 3300025304 Ga0209257_1007832 Ga0209257_10078324 497
9 3300048905 Ga0496102_0034556 Ga0496102_0034556_176_1795 498
10 3300025927 Ga0207687_10108226 Ga0207687_101082262 500
11 3300046475 Ga0495639_0006918 Ga0495639_0006918_3255_4856 500
12 3300046529 Ga0495652_0087301 Ga0495652_0087301_906_2507 500
13 iso_pu_bacteria 2551306352 2552746634 500
14 iso_pu_bacteria 2639762793 2640734972 500
15 iso_pu_bacteria 2773857761 2774389580 500
16 iso_pu_bacteria 2773857770 2774436716 500
17 3300005272 Ga0065703_1000106 Ga0065703_100010611 501
18 3300005353 Ga0070669_100012110 Ga0070669_1000121102 501
19 3300009011 Ga0105251_10047468 Ga0105251_100474681 501
20 3300009101 Ga0105247_10000503 Ga0105247_1000050318 501
21 3300009148 Ga0105243_10000010 Ga0105243_10000010112 501
22 3300013102 Ga0157371_10084098 Ga0157371_100840981 501
23 3300025728 Ga0207655_1001468 Ga0207655_10014685 501
24 3300025728 Ga0207655_1001487 Ga0207655_10014875 501
25 3300025900 Ga0207710_10000005 Ga0207710_10000005444 501
26 3300025923 Ga0207681_10004476 Ga0207681_1000447612 501
27 3300025935 Ga0207709_10000001 Ga0207709_10000001368 501
28 3300033180 Ga0307510_10000008 Ga0307510_10000008317 501
29 iso_pu_bacteria 2513020051 2513230568 501
30 iso_pu_bacteria 2585428058 2587733569 501
31 iso_pu_bacteria 2643221665 2644361810 501
32 iso_pu_bacteria 2919506607 2919507842 501
33 iso_pu_bacteria 2945984333 2945988235 501
34 3300009011 Ga0105251_10006521 Ga0105251_100065216 502
35 3300009011 Ga0105251_10047639 Ga0105251_100476391 502
36 3300009553 Ga0105249_10001247 Ga0105249_100012471 502
37 3300025735 Ga0207713_1006708 Ga0207713_10067087 502
38 3300031730 Ga0307516_10001053 Ga0307516_1000105312 502
39 iso_pu_bacteria 2643221639 2644219221 502
40 iso_pu_bacteria 2643221672 2644399783 502
41 iso_pu_bacteria 2842677519 2842680308 502
42 iso_pu_bacteria 2885192300 2885192971 502
43 iso_pu_bacteria 2904449895 2904452613 502
44 iso_pu_bacteria 2904456579 2904460790 502
45 iso_pu_bacteria 2945945610 2945945877 502
46 iso_pu_bacteria 2989392574 2989395577 502
47 3300017792 Ga0163161_10000521 Ga0163161_1000052122 503
48 3300053146 Ga0500588_0012671 Ga0500588_0012671_378_1958 503
49 3300053156 Ga0500622_0002544 Ga0500622_0002544_4133_5713 503
50 3300053156 Ga0500622_0002832 Ga0500622_0002832_8637_10217 503
51 iso_pu_bacteria 2585428057 2587729002 503
52 iso_pu_bacteria 2643221592 2643967042 503
53 iso_pu_bacteria 2643221625 2644139908 503
54 iso_pu_bacteria 2643221648 2644271148 503
55 iso_pu_bacteria 2919462493 2919463753 503
56 iso_pu_bacteria 2929520902 2929522566 503
57 3300005548 Ga0070665_100031517 Ga0070665_1000315171 504
58 3300005617 Ga0068859_100015884 Ga0068859_1000158846 504
59 3300005841 Ga0068863_100020057 Ga0068863_1000200571 504
60 3300006048 Ga0075363_100035628 Ga0075363_1000356282 504
61 3300006931 Ga0097620_100015885 Ga0097620_1000158856 504
62 3300009093 Ga0105240_10233319 Ga0105240_102333192 504
63 3300025245 Ga0207425_1000133 Ga0207425_100013323 504
64 3300025258 Ga0209129_1000186 Ga0209129_100018662 504
65 3300025263 Ga0209565_1000190 Ga0209565_100019053 504
66 3300025273 Ga0209673_1000393 Ga0209673_100039353 504
67 3300025284 Ga0209130_1000433 Ga0209130_100043323 504
68 3300025291 Ga0209675_1000300 Ga0209675_100030027 504
69 3300025292 Ga0209676_1002454 Ga0209676_10024542 504
70 3300025294 Ga0209025_1000947 Ga0209025_100094726 504
71 3300025295 Ga0209564_1000417 Ga0209564_100041723 504
72 3300025297 Ga0209758_1000092 Ga0209758_1000092210 504
73 3300025299 Ga0209256_1000094 Ga0209256_1000094180 504
74 3300025302 Ga0207426_1000084 Ga0207426_100008423 504
75 3300025304 Ga0209257_1003968 Ga0209257_100396814 504
76 3300025924 Ga0207694_10053768 Ga0207694_100537682 504
77 3300026035 Ga0207703_10000563 Ga0207703_1000056321 504
78 3300026088 Ga0207641_10010219 Ga0207641_100102196 504
79 3300028379 Ga0268266_10004664 Ga0268266_1000466410 504
80 3300028381 Ga0268264_10001647 Ga0268264_1000164712 504
81 3300028794 Ga0307515_10089421 Ga0307515_100894213 504
82 3300031649 Ga0307514_10000592 Ga0307514_1000059243 504
83 3300031730 Ga0307516_10020470 Ga0307516_100204705 504
84 3300048905 Ga0496102_0015371 Ga0496102_0015371_2662_4266 504
85 3300048920 Ga0496117_0000044 Ga0496117_0000044_129764_131368 504
86 3300048921 Ga0496118_0000025 Ga0496118_0000025_70644_72248 504
87 3300048922 Ga0496119_0002747 Ga0496119_0002747_7475_9079 504
88 3300048923 Ga0496120_0021651 Ga0496120_0021651_681_2285 504
89 3300048924 Ga0496121_0027924 Ga0496121_0027924_3269_4873 504
90 3300048928 Ga0496125_0000726 Ga0496125_0000726_19392_21002 504
91 3300048929 Ga0496126_0065307 Ga0496126_0065307_153_1763 504
92 3300048929 Ga0496126_0097771 Ga0496126_0097771_227_1831 504
93 iso_pu_bacteria 2718218334 2721029590 504
94 iso_pu_bacteria 2842914999 2842915934 504
95 iso_pu_bacteria 2928515477 2928517922 504
96 3300003215 JGI25153J46596_10026017 JGI25153J46596_100260171 505
97 3300003761 Ga0055535_1000047 Ga0055535_100004771 505
98 3300003763 Ga0055529_1000148 Ga0055529_100014882 505
99 3300003775 Ga0055524_1000061 Ga0055524_1000061103 505
100 3300003791 Ga0055530_10000636 Ga0055530_1000063626 505
101 3300003792 Ga0055540_1000212 Ga0055540_100021222 505
102 3300003794 Ga0055531_10003307 Ga0055531_100033075 505
103 3300005539 Ga0068853_100174287 Ga0068853_1001742872 505
104 3300006042 Ga0075368_10033719 Ga0075368_100337192 505
105 3300006195 Ga0075366_10012038 Ga0075366_100120385 505
106 3300006195 Ga0075366_10048921 Ga0075366_100489212 505
107 3300006353 Ga0075370_10003729 Ga0075370_100037298 505
108 3300006946 Ga0079104_1000093 Ga0079104_100009350 505
109 3300009093 Ga0105240_10026373 Ga0105240_100263733 505
110 3300009093 Ga0105240_10104494 Ga0105240_101044942 505
111 3300009148 Ga0105243_10011976 Ga0105243_100119765 505
112 3300009545 Ga0105237_10039689 Ga0105237_100396892 505
113 3300010375 Ga0105239_10058412 Ga0105239_100584122 505
114 3300015261 Ga0182006_1000779 Ga0182006_10007793 505
115 3300015262 Ga0182007_10000246 Ga0182007_1000024612 505
116 3300025231 Ga0207427_100391 Ga0207427_10039117 505
117 3300025242 Ga0209258_100072 Ga0209258_100072198 505
118 3300025242 Ga0209258_100341 Ga0209258_1003415 505
119 3300025256 Ga0209759_1001196 Ga0209759_100119610 505
120 3300025272 Ga0209455_1000053 Ga0209455_1000053278 505
121 3300025284 Ga0209130_1000979 Ga0209130_100097919 505
122 3300025292 Ga0209676_1000069 Ga0209676_100006914 505
123 3300025292 Ga0209676_1002619 Ga0209676_10026192 505
124 3300025297 Ga0209758_1000177 Ga0209758_1000177106 505
125 3300025298 Ga0209050_1000023 Ga0209050_1000023189 505
126 3300025298 Ga0209050_1003727 Ga0209050_10037272 505
127 3300025299 Ga0209256_1000030 Ga0209256_1000030103 505
128 3300025302 Ga0207426_1000715 Ga0207426_100071519 505
129 3300025303 Ga0209051_1000017 Ga0209051_1000017189 505
130 3300025303 Ga0209051_1000207 Ga0209051_100020754 505
131 3300025304 Ga0209257_1000041 Ga0209257_1000041189 505
132 3300025304 Ga0209257_1000249 Ga0209257_1000249112 505
133 3300025728 Ga0207655_1004621 Ga0207655_10046216 505
134 3300025913 Ga0207695_10054868 Ga0207695_100548684 505
135 3300025933 Ga0207706_10003225 Ga0207706_100032259 505
136 3300025933 Ga0207706_10004447 Ga0207706_100044476 505
137 3300025933 Ga0207706_10013847 Ga0207706_100138475 505
138 3300026041 Ga0207639_10067566 Ga0207639_100675663 505
139 3300027111 Ga0209281_1000084 Ga0209281_1000084158 505
140 3300027876 Ga0209974_10003424 Ga0209974_100034243 505
141 3300028666 Ga0265336_10000029 Ga0265336_1000002915 505
142 3300028794 Ga0307515_10157019 Ga0307515_101570191 505
143 3300029957 Ga0265324_10000372 Ga0265324_1000037215 505
144 3300030522 Ga0307512_10034237 Ga0307512_100342372 505
145 3300031616 Ga0307508_10031089 Ga0307508_1003108911 505
146 3300031649 Ga0307514_10026075 Ga0307514_100260752 505
147 3300033180 Ga0307510_10004129 Ga0307510_1000412919 505
148 3300044684 Ga0466966_0101346 Ga0466966_0101346_18_1619 505
149 3300044693 Ga0466961_0089189 Ga0466961_0089189_249_1850 505
150 3300044706 Ga0466964_0003097 Ga0466964_0003097_4390_5991 505
151 3300046453 Ga0495627_005457 Ga0495627_005457_1631_3238 505
152 3300046506 Ga0495583_0027963 Ga0495583_0027963_502_2109 505
153 3300046519 Ga0495632_0004129 Ga0495632_0004129_3157_4755 505
154 3300047472 Ga0495686_0005675 Ga0495686_0005675_5205_6809 505
155 3300048905 Ga0496102_0005601 Ga0496102_0005601_6985_8592 505
156 3300048917 Ga0496114_0029765 Ga0496114_0029765_2830_4431 505
157 3300048921 Ga0496118_0073139 Ga0496118_0073139_309_1916 505
158 3300048928 Ga0496125_0028447 Ga0496125_0028447_1682_3289 505
159 3300048929 Ga0496126_0139550 Ga0496126_0139550_181_1767 505
160 3300050493 nmdc:mga0k408_23651_c1 nmdc:mga0k408_23651_c1_11_1615 505
161 3300050493 nmdc:mga0k408_2868_c1 nmdc:mga0k408_2868_c1_546_2150 505
162 3300050493 nmdc:mga0k408_35347_c1 nmdc:mga0k408_35347_c1_602_2206 505
163 3300050494 nmdc:mga06z11_10899_c1 nmdc:mga06z11_10899_c1_2226_3830 505
164 3300050496 nmdc:mga07m45_15971_c1 nmdc:mga07m45_15971_c1_818_2422 505
165 3300053092 Ga0500583_0067403 Ga0500583_0067403_31_1614 505
166 3300053139 Ga0500568_0005777 Ga0500568_0005777_2386_3984 505
167 3300053156 Ga0500622_0000091 Ga0500622_0000091_26038_27639 505
168 3300053730 Ga0500645_001403 Ga0500645_001403_1976_3580 505
169 3300003792 Ga0055540_1005318 Ga0055540_10053184 506
170 3300003792 Ga0055540_1007196 Ga0055540_10071963 506
171 3300005459 Ga0068867_100000097 Ga0068867_10000009745 506
172 3300005548 Ga0070665_100000513 Ga0070665_10000051335 506
173 3300006048 Ga0075363_100020592 Ga0075363_1000205923 506
174 3300006177 Ga0075362_10004701 Ga0075362_100047013 506
175 3300009093 Ga0105240_10085326 Ga0105240_100853262 506
176 3300009148 Ga0105243_10000316 Ga0105243_1000031641 506
177 3300009148 Ga0105243_10031313 Ga0105243_100313132 506
178 3300009545 Ga0105237_10036771 Ga0105237_100367713 506
179 3300011119 Ga0105246_10094794 Ga0105246_100947941 506
180 3300013306 Ga0163162_10095129 Ga0163162_100951293 506
181 3300014745 Ga0157377_10000006 Ga0157377_10000006320 506
182 3300025303 Ga0209051_1000099 Ga0209051_1000099171 506
183 3300025303 Ga0209051_1003021 Ga0209051_10030213 506
184 3300025304 Ga0209257_1000752 Ga0209257_100075220 506
185 3300025913 Ga0207695_10044543 Ga0207695_100445432 506
186 3300025913 Ga0207695_10206509 Ga0207695_102065091 506
187 3300025935 Ga0207709_10000698 Ga0207709_1000069814 506
188 3300025935 Ga0207709_10015453 Ga0207709_100154532 506
189 3300026089 Ga0207648_10006761 Ga0207648_100067613 506
190 3300026121 Ga0207683_10064103 Ga0207683_100641032 506
191 3300028379 Ga0268266_10002920 Ga0268266_100029205 506
192 3300028379 Ga0268266_10083213 Ga0268266_100832132 506
193 3300028786 Ga0307517_10000024 Ga0307517_10000024156 506
194 3300028794 Ga0307515_10053921 Ga0307515_100539219 506
195 3300030744 Ga0316181_1059055 Ga0316181_10590552 506
196 3300031456 Ga0307513_10023105 Ga0307513_100231052 506
197 3300031731 Ga0307405_10031517 Ga0307405_100315172 506
198 3300031901 Ga0307406_10004365 Ga0307406_100043656 506
199 3300037471 Ga0395905_0038802 Ga0395905_0038802_609_2216 506
200 3300041411 Ga0439466_0003032 Ga0439466_0003032_3460_5073 506
201 3300050489 nmdc:mga03683_8591_c1 nmdc:mga03683_8591_c1_1202_2812 506
202 3300050490 nmdc:mga03n38_10408_c1 nmdc:mga03n38_10408_c1_299_1906 506
203 3300050491 nmdc:mga00v17_99350_c1 nmdc:mga00v17_99350_c1_185_1795 506
204 3300050493 nmdc:mga0k408_25312_c1 nmdc:mga0k408_25312_c1_934_2544 506
205 3300002773 JGI25152J39213_1002978 JGI25152J39213_10029781 507
206 3300003791 Ga0055530_10019305 Ga0055530_100193051 507
207 3300005330 Ga0070690_100000968 Ga0070690_1000009688 507
208 3300005563 Ga0068855_100026487 Ga0068855_1000264875 507
209 3300005719 Ga0068861_100018394 Ga0068861_1000183942 507
210 3300005981 Ga0081538_10032878 Ga0081538_100328781 507
211 3300006195 Ga0075366_10008470 Ga0075366_100084703 507
212 3300009545 Ga0105237_10130271 Ga0105237_101302711 507
213 3300013105 Ga0157369_10031079 Ga0157369_100310791 507
214 3300025273 Ga0209673_1008284 Ga0209673_10082842 507
215 3300025298 Ga0209050_1000720 Ga0209050_100072030 507
216 3300025949 Ga0207667_10006072 Ga0207667_100060725 507
217 3300025949 Ga0207667_10108686 Ga0207667_101086862 507
218 3300026078 Ga0207702_10040372 Ga0207702_100403722 507
219 3300026118 Ga0207675_100017085 Ga0207675_1000170855 507
220 3300030521 Ga0307511_10014184 Ga0307511_100141845 507
221 3300037471 Ga0395905_0010204 Ga0395905_0010204_1051_2658 507
222 3300039447 Ga0436361_0698026 Ga0436361_0698026_2302_3909 507
223 3300042532 Ga0450893_0001767 Ga0450893_0001767_1452_3062 507
224 3300044901 Ga0466960_0005611 Ga0466960_0005611_1309_2922 507
225 3300046506 Ga0495583_0001679 Ga0495583_0001679_16480_18087 507
226 3300046507 Ga0495606_0000329 Ga0495606_0000329_14766_16373 507
227 3300046519 Ga0495632_0065935 Ga0495632_0065935_76_1683 507
228 3300046616 Ga0495668_0017646 Ga0495668_0017646_1873_3480 507
229 3300046694 Ga0495649_0000942 Ga0495649_0000942_18253_19860 507
230 3300050493 nmdc:mga0k408_8409_c1 nmdc:mga0k408_8409_c1_2998_4608 507
231 3300053086 Ga0500578_0000342 Ga0500578_0000342_21101_22705 507
232 3300053119 Ga0500595_002908 Ga0500595_002908_4755_6353 507
233 3300053177 Ga0500636_0015863 Ga0500636_0015863_2606_4213 507
234 3300005539 Ga0068853_100019094 Ga0068853_1000190943 508
235 3300006195 Ga0075366_10005045 Ga0075366_100050453 508
236 3300009093 Ga0105240_10009929 Ga0105240_1000992913 508
237 3300009551 Ga0105238_10003393 Ga0105238_100033934 508
238 3300010375 Ga0105239_10009282 Ga0105239_1000928211 508
239 3300010375 Ga0105239_10012683 Ga0105239_100126833 508
240 3300025253 Ga0209677_103761 Ga0209677_1037612 508
241 3300025913 Ga0207695_10008170 Ga0207695_100081704 508
242 3300025914 Ga0207671_10004922 Ga0207671_100049224 508
243 3300026067 Ga0207678_10043891 Ga0207678_100438912 508
244 3300046507 Ga0495606_0034604 Ga0495606_0034604_1391_2980 508
245 3300046515 Ga0495620_0002540 Ga0495620_0002540_649_2238 508
246 3300046519 Ga0495632_0006599 Ga0495632_0006599_723_2342 508
247 3300046524 Ga0495648_0007414 Ga0495648_0007414_1503_3122 508
248 3300046542 Ga0495597_0005059 Ga0495597_0005059_1466_3076 508
249 3300046665 Ga0495661_0000643 Ga0495661_0000643_17483_19072 508
250 3300046691 Ga0495670_0004986 Ga0495670_0004986_4699_6288 508
251 3300047443 Ga0495687_000705 Ga0495687_000705_9645_11255 508
252 3300047469 Ga0495673_0000161 Ga0495673_0000161_92779_94368 508
253 3300047472 Ga0495686_0000176 Ga0495686_0000176_108845_110434 508
254 3300047472 Ga0495686_0022572 Ga0495686_0022572_521_2110 508
255 3300048909 Ga0496106_0001623 Ga0496106_0001623_6522_8111 508
256 3300050493 nmdc:mga0k408_512_c1 nmdc:mga0k408_512_c1_14063_15682 508
257 3300050493 nmdc:mga0k408_512_c1 nmdc:mga0k408_512_c1_5649_7268 508
258 3300053730 Ga0500645_000304 Ga0500645_000304_12236_13825 508
259 3300009093 Ga0105240_10049286 Ga0105240_100492863 510
260 3300009147 Ga0114129_10425044 Ga0114129_104250441 510
261 3300025913 Ga0207695_10035810 Ga0207695_100358102 510
262 3300025949 Ga0207667_10113126 Ga0207667_101131262 510
263 3300042184 Ga0450908_000001 Ga0450908_000001_64301_65896 510
264 3300005842 Ga0068858_100003891 Ga0068858_1000038912 511
265 3300005842 Ga0068858_100020821 Ga0068858_1000208217 511
266 3300009545 Ga0105237_10011669 Ga0105237_100116693 511
267 3300025914 Ga0207671_10007645 Ga0207671_100076456 511
268 3300026035 Ga0207703_10009012 Ga0207703_100090121 511
269 3300026035 Ga0207703_10027115 Ga0207703_100271152 511
270 3300038725 Ga0400484_06002 Ga0400484_06002_491_2110 511
271 3300038741 Ga0400488_28982 Ga0400488_28982_1471_3090 511
272 3300039110 Ga0400487_02611 Ga0400487_02611_2367_3989 511
273 3300009094 Ga0111539_10000057 Ga0111539_1000005733 512
274 3300027907 Ga0207428_10000996 Ga0207428_1000099616 512
275 3300038725 Ga0400484_31125 Ga0400484_31125_4438_6081 512
276 3300046660 Ga0495625_0000045 Ga0495625_0000045_50856_52490 512
277 3300050511 nmdc:mga08y16_162_c1 nmdc:mga08y16_162_c1_34818_36440 512
278 3300001989 JGI24739J22299_10002492 JGI24739J22299_100024925 518
279 3300001990 JGI24737J22298_10008763 JGI24737J22298_100087632 518
280 3300002067 JGI24735J21928_10001411 JGI24735J21928_100014115 518
281 3300005563 Ga0068855_100019458 Ga0068855_1000194581 518
282 3300005577 Ga0068857_100000562 Ga0068857_1000005626 518
283 3300005578 Ga0068854_100016565 Ga0068854_1000165653 518
284 3300005616 Ga0068852_100079387 Ga0068852_1000793872 518
285 3300009093 Ga0105240_10010614 Ga0105240_100106145 518
286 3300009545 Ga0105237_10000112 Ga0105237_1000011282 518
287 3300012500 Ga0157314_1000413 Ga0157314_10004131 518
288 3300025913 Ga0207695_10004175 Ga0207695_1000417511 518
289 3300025914 Ga0207671_10000009 Ga0207671_10000009119 518
290 3300025949 Ga0207667_10002016 Ga0207667_1000201611 518
291 3300025981 Ga0207640_10022394 Ga0207640_100223943 518
292 3300026116 Ga0207674_10000145 Ga0207674_1000014513 518
293 3300048924 Ga0496121_0019728 Ga0496121_0019728_3822_5630 518

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06956

RtcR

Regulator of RNA terminal phosphate cyclase

4

185

0.99

PF00158

Sigma54_activat

Sigma-54 interaction domain

186

356

0.93

PF14532

Sigma54_activ_2

Sigma-54 interaction domain

188

361

0.88

PF00004

AAA

ATPase family associated with various cellular activities (AAA)

211

352

0.76

PF01078

Mg_chelatase

Magnesium chelatase, subunit ChlI

195

334

0.76

PF07728

AAA_5

AAA domain (dynein-related subfamily)

210

345

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
4bs1-assembly1.cif.gz_B-1 mub is an aaaplus atpase that forms helical filaments to control target selection for dna transposition 0.9159 184 359
4bs1-assembly1.cif.gz_B-1 mub is an aaaplus atpase that forms helical filaments to control target selection for dna transposition 0.9059 184 359
1ojl-assembly2.cif.gz_F-3 crystal structure of a sigma54-activator suggests the mechanism for the conformational switch necessary for sigma54 binding 0.9016 185 434
6jdi-assembly1.cif.gz_A central domain of fleq h287n mutant in complex with atpgs and mg 0.8965 190 439
1ny6-assembly1.cif.gz_B crystal structure of sigm54 activator (aaa+ atpase) in the active state 0.8953 191 435
ID Description Score Start End Superfamily
af_P38035_362_443_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.99 363 442 1.10.8.60
af_P38035_362_443_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9545 363 442 1.10.8.60
5m7nA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9359 185 357 3.40.50.300
af_P38035_172_361_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9341 172 361 3.40.50.300
af_P07604_193_369_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9335 186 359 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A2V8ULU9-F1-model_v4 Sigma-54 factor interaction domain-containing protein 0.9776 243 367 GO:0005524
GO:0006355
AF-A0A6D0ENZ7-F1-model_v4 deleted 0.9703 1 133
AF-A0A6D0ENZ7-F1-model_v4 deleted 0.9562 1 133
AF-A0A485BGG0-F1-model_v4 Nitrogen regulation protein NR(I) 0.9557 256 340 GO:0000160
GO:0005524
GO:0006355
AF-A0A212DLT4-F1-model_v4 deleted 0.9555 240 364

Feature Viewer

pLDDT pTM Quality
80.99 0.54 Medium
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Predicted Structure (AlphaFold2)

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