F391058

General Info

Members Datasets Scaffolds Average Seq Length
292 206 584 553

Family's Representative Sequence

Representative Sequence 3300037853|Ga0436364_0380175|Ga0436364_0380175_6143_8077
Length 644
Sequence MHWQAVDAGVPDIVVWKHGTTFNLRRTISASARRANEARSKNRHQGAGCYPWHEPQRSTRPGVLDRQGAGGSIMVSVTTTDASGARIIAELIHGHGVSHVFIVPAILREGLAELGSLGVRTISAHGEKAAAYMADGYARVLGRPGVCMSQTVGASNIAAGLKDAYLSCSPVVAFTGGTAPDTRYRNVYQEIRDFDMFAPVTKWNAEVEGPNRLPDVVSQAFRVATTGAPGPVHVELRGNTGQVGVGSPDQQRAFELNIDPRFAEVPPFRPVADAADIRAALHELQTAQRPIIVAGGGVMWSRAEAELVELAERMSIPVATSLHAKACIPESNPLNVGICGTYSRVCANRAVAEADLVFYIGSQSGSMITAFWHVPPQGTRVIHLDIDPSQLGRHYPTAVSLNGDAKATLQRMLADAPRRDNPVWRDRVQTLVSQWRSEVAATVETNSGPIRPERIVAEIGNALPANGAAVIDTLQASVWSGSFMPLKGASQRFVRCAGSLGWGFPAAIGAKAALGDRPVVCFTGDGGFYYHIAELETAARYGIPLVVVVNNNGAYGAERPDEQSPYRADAGIGDANKTWKFGQYNFAQIAREFGCEGVRVENPVDVGSAIQRALGSGKPVVLDVLTDPTASHPRAWTPPALAHV

Samples

Sample ID Description Type Environment
1 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
18 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
19 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
20 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
21 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
22 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
23 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
24 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
25 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
26 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
27 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
28 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
29 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
30 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
31 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
32 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
33 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
34 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
35 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
36 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
37 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
38 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
39 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
40 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
41 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
42 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
43 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
44 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
45 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
46 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
47 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
48 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
49 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
50 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
51 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
52 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
53 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
54 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
56 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
57 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
58 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
60 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
61 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
64 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
65 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
66 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
67 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
68 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
69 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
70 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
71 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
72 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
73 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
74 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
75 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
104 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
105 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
107 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
108 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
109 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
110 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
111 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
112 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
113 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
114 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
115 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
116 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
117 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
118 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
119 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
120 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
121 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
122 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
123 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
124 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
125 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
126 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
127 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
128 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
129 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
130 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
131 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
132 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
133 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
134 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
135 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
136 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
137 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
138 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
139 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
140 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
141 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
142 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
143 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
144 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
145 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
146 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
147 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
148 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
149 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
150 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
151 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
152 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
153 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
154 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
155 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
156 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
157 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
158 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
159 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
160 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
161 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
162 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
163 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
164 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
165 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
166 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
167 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
168 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
169 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
170 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
171 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
173 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
174 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
175 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
176 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
177 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
178 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
179 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
180 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
181 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
182 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
183 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
184 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
185 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
186 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
187 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
188 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
189 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
190 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
191 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
192 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
193 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
194 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
195 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
196 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
197 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
198 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
199 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
200 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
201 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
202 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
203 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
204 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
205 2751185897 Sphingomonas panacis DCY99 Isolate Unclassified
206 2854911287 Brucella lupini LUP21 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.32
Metatranscriptomes 0
Isolates 0.68

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.37
Nodule 0
Rhizoplane 2.74
Rhizosphere 88.36
Stem 0
Stem Tuber 0
Unclassified 6.16

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436364_0380175 3300037853 Bacteria 8114
2 rootH2_10021968 3300003320 Bacteria 7556
3 JGI25407J50210_10012674 3300003373 Bacteria 2161
4 Ga0070658_10018004 3300005327 Bacteria 5650
5 Ga0070683_100000850 3300005329 Bacteria 22636
6 Ga0070683_100014142 3300005329 Bacteria 6971
7 Ga0070670_100004001 3300005331 Bacteria 12302
8 Ga0070666_10067872 3300005335 Bacteria 2421
9 Ga0070680_100030790 3300005336 Bacteria 4311
10 Ga0068868_100005626 3300005338 Bacteria 8816
11 Ga0070689_100005426 3300005340 Bacteria 8702
12 Ga0070691_10006951 3300005341 Bacteria 5182
13 Ga0070661_100003892 3300005344 Bacteria 10278
14 Ga0070675_100039931 3300005354 Bacteria 3830
15 Ga0070671_100001341 3300005355 Bacteria 18456
16 Ga0070673_100003613 3300005364 Bacteria 9676
17 Ga0070667_100035105 3300005367 Bacteria 4200
18 Ga0070703_10004605 3300005406 Bacteria 3867
19 Ga0070709_10041892 3300005434 Bacteria 2824
20 Ga0070714_100009643 3300005435 Bacteria 7601
21 Ga0070714_100096494 3300005435 Bacteria 2597
22 Ga0070713_100043084 3300005436 Bacteria 3688
23 Ga0070710_10032516 3300005437 Unclassified 2826
24 Ga0070711_100100285 3300005439 Bacteria 2105
25 Ga0070705_100000280 3300005440 Bacteria 30477
26 Ga0070705_100027388 3300005440 Bacteria 3112
27 Ga0070700_100000800 3300005441 Bacteria 15435
28 Ga0070694_100003068 3300005444 Bacteria 9940
29 Ga0070694_100074546 3300005444 Bacteria 2346
30 Ga0070708_100059903 3300005445 Bacteria 3396
31 Ga0070678_100002134 3300005456 Bacteria 10725
32 Ga0070662_100055242 3300005457 Bacteria 2880
33 Ga0070681_10030377 3300005458 Bacteria 5422
34 Ga0070681_10058709 3300005458 Bacteria 3827
35 Ga0068867_100022501 3300005459 Bacteria 4507
36 Ga0070706_100043504 3300005467 Unclassified 4150
37 Ga0070706_100164853 3300005467 Bacteria 2069
38 Ga0070707_100001809 3300005468 Bacteria 20551
39 Ga0070707_100019730 3300005468 Bacteria 6354
40 Ga0070707_100071003 3300005468 Unclassified 3354
41 Ga0070698_100022364 3300005471 Bacteria 6614
42 Ga0070698_100060236 3300005471 Bacteria 3831
43 Ga0070698_100103954 3300005471 Bacteria 2810
44 Ga0070698_100139164 3300005471 Bacteria 2380
45 Ga0070699_100001385 3300005518 Bacteria 22280
46 Ga0070699_100007007 3300005518 Bacteria 9797
47 Ga0070699_100014961 3300005518 Bacteria 6667
48 Ga0070679_100052819 3300005530 Bacteria 4046
49 Ga0070679_100199032 3300005530 Bacteria 1970
50 Ga0070684_100107438 3300005535 Bacteria 2499
51 Ga0070672_100017247 3300005543 Bacteria 5192
52 Ga0070686_100006054 3300005544 Bacteria 6712
53 Ga0070695_100007601 3300005545 Bacteria 6421
54 Ga0070696_100000420 3300005546 Bacteria 26506
55 Ga0068855_100042984 3300005563 Bacteria 5355
56 Ga0068855_100052899 3300005563 Bacteria 4779
57 Ga0068855_100111490 3300005563 Bacteria 3140
58 Ga0070664_100001067 3300005564 Bacteria 21578
59 Ga0070664_100081062 3300005564 Unclassified 2796
60 Ga0068857_100039848 3300005577 Bacteria 4164
61 Ga0068857_100135536 3300005577 Bacteria 2223
62 Ga0068859_100001793 3300005617 Bacteria 21863
63 Ga0068864_100053033 3300005618 Bacteria 3497
64 Ga0068851_10018445 3300005834 Bacteria 3360
65 Ga0068860_100001979 3300005843 Bacteria 21661
66 Ga0081455_10003911 3300005937 Bacteria 16956
67 Ga0081455_10028801 3300005937 Bacteria 5070
68 Ga0081538_10007091 3300005981 Bacteria 9738
69 Ga0081538_10030958 3300005981 Bacteria 3620
70 Ga0070717_10101535 3300006028 Unclassified 2443
71 Ga0075364_10067265 3300006051 Unclassified 2355
72 Ga0070716_100059919 3300006173 Bacteria 2196
73 Ga0070712_100087628 3300006175 Bacteria 2272
74 Ga0097621_100003120 3300006237 Bacteria 11371
75 Ga0068871_100001807 3300006358 Bacteria 14436
76 Ga0075430_100026201 3300006846 Bacteria 4961
77 Ga0075431_100005793 3300006847 Bacteria 12225
78 Ga0097620_100001793 3300006931 Bacteria 21863
79 Ga0099794_10023759 3300007265 Bacteria 2808
80 Ga0099795_10020385 3300007788 Bacteria 2159
81 Ga0111539_10001848 3300009094 Bacteria 28145
82 Ga0111539_10017506 3300009094 Bacteria 8872
83 Ga0114129_10266100 3300009147 Bacteria 2295
84 Ga0105248_10040847 3300009177 Bacteria 5200
85 Ga0105248_10080691 3300009177 Bacteria 3657
86 Ga0105246_10052798 3300011119 Bacteria 2795
87 Ga0157374_10059302 3300013296 Bacteria 3578
88 Ga0157378_10086295 3300013297 Bacteria 2845
89 Ga0163162_10011588 3300013306 Bacteria 8599
90 Ga0163162_10067741 3300013306 Bacteria 3620
91 Ga0157375_10025007 3300013308 Bacteria 5539
92 Ga0163163_10233270 3300014325 Bacteria 1889
93 Ga0182008_10000288 3300014497 Bacteria 39629
94 Ga0157377_10025584 3300014745 Bacteria 3149
95 Ga0182007_10000119 3300015262 Bacteria 54423
96 Ga0213876_10006516 3300021384 Bacteria 6363
97 Ga0213876_10017306 3300021384 Bacteria 3805
98 Ga0213875_10000081 3300021388 Bacteria 114181
99 Ga0213875_10002110 3300021388 Bacteria 12184
100 Ga0207656_10006099 3300025321 Bacteria 4315
101 Ga0207699_10019846 3300025906 Bacteria 3593
102 Ga0207684_10172629 3300025910 Bacteria 1863
103 Ga0207684_10191996 3300025910 Bacteria 1762
104 Ga0207707_10033446 3300025912 Bacteria 4500
105 Ga0207693_10009452 3300025915 Bacteria 7944
106 Ga0207693_10038316 3300025915 Bacteria 3775
107 Ga0207663_10028571 3300025916 Unclassified 3265
108 Ga0207663_10060790 3300025916 Bacteria 2395
109 Ga0207660_10000964 3300025917 Bacteria 19054
110 Ga0207649_10017728 3300025920 Bacteria 4037
111 Ga0207646_10014181 3300025922 Bacteria 7576
112 Ga0207646_10062879 3300025922 Bacteria 3314
113 Ga0207646_10094433 3300025922 Bacteria 2678
114 Ga0207646_10106725 3300025922 Bacteria 2512
115 Ga0207650_10001044 3300025925 Bacteria 20713
116 Ga0207659_10072827 3300025926 Bacteria 2513
117 Ga0207664_10044223 3300025929 Bacteria 3487
118 Ga0207664_10111589 3300025929 Bacteria 2275
119 Ga0207644_10001830 3300025931 Bacteria 13812
120 Ga0207670_10021744 3300025936 Bacteria 3963
121 Ga0207665_10150577 3300025939 Bacteria 1666
122 Ga0207691_10011657 3300025940 Bacteria 8440
123 Ga0207711_10053535 3300025941 Bacteria 3461
124 Ga0207679_10008182 3300025945 Bacteria 6656
125 Ga0207667_10020825 3300025949 Bacteria 7282
126 Ga0207651_10013519 3300025960 Bacteria 4674
127 Ga0207640_10004438 3300025981 Bacteria 7610
128 Ga0207677_10068337 3300026023 Bacteria 2493
129 Ga0207678_10040323 3300026067 Bacteria 4050
130 Ga0207708_10002182 3300026075 Bacteria 14441
131 Ga0207708_10032547 3300026075 Bacteria 3959
132 Ga0207676_10048607 3300026095 Bacteria 3294
133 Ga0207676_10082245 3300026095 Bacteria 2618
134 Ga0207683_10002745 3300026121 Bacteria 15370
135 Ga0207698_10000870 3300026142 Bacteria 17515
136 Ga0209588_1025680 3300027671 Bacteria 1866
137 Ga0209974_10013653 3300027876 Bacteria 2705
138 Ga0209974_10014327 3300027876 Unclassified 2640
139 Ga0207428_10000213 3300027907 Bacteria 80079
140 Ga0268265_10001718 3300028380 Bacteria 17722
141 Ga0265325_10011505 3300031241 Bacteria 5083
142 Ga0265331_10005356 3300031250 Bacteria 7757
143 Ga0265316_10048680 3300031344 Bacteria 3344
144 Ga0307507_10050492 3300033179 Bacteria 4014
145 Ga0373934_0025050 3300035086 Bacteria 2309
146 Ga0373953_0004481 3300035117 Bacteria 4456
147 Ga0373954_0012481 3300035118 Bacteria 3777
148 Ga0373956_0008143 3300035119 Bacteria 4241
149 Ga0373957_0003530 3300035120 Bacteria 4637
150 Ga0373955_0006709 3300035172 Bacteria 5254
151 Ga0373955_0089117 3300035172 Unclassified 1755
152 Ga0373962_0004088 3300035242 Bacteria 3518
153 Ga0373924_0002617 3300035410 Bacteria 6074
154 Ga0373935_0022646 3300035692 Bacteria 3855
155 Ga0373933_0002111 3300035724 Bacteria 11412
156 Ga0373933_0004416 3300035724 Bacteria 7724
157 Ga0373933_0017625 3300035724 Bacteria 4007
158 Ga0373933_0031843 3300035724 Bacteria 3062
159 Ga0373947_0024530 3300035725 Bacteria 3515
160 Ga0373937_0001507 3300036401 Bacteria 19562
161 Ga0373937_0003546 3300036401 Bacteria 13142
162 Ga0373937_0005823 3300036401 Bacteria 10599
163 Ga0373937_0010769 3300036401 Bacteria 8003
164 Ga0373937_0019181 3300036401 Bacteria 6122
165 Ga0373937_0108978 3300036401 Bacteria 2575
166 Ga0316584_0120824 3300036712 Bacteria 1958
167 Ga0395898_0027220 3300037466 Bacteria 5742
168 Ga0436364_0051340 3300037853 Bacteria 6234
169 Ga0436364_0052069 3300037853 Bacteria 6657
170 Ga0436364_0097713 3300037853 Bacteria 12294
171 Ga0436364_0560002 3300037853 Bacteria 93566
172 Ga0436364_0616448 3300037853 Bacteria 1930
173 Ga0436364_0647301 3300037853 Bacteria 6843
174 Ga0436364_0664634 3300037853 Bacteria 1971
175 Ga0436364_0881244 3300037853 Bacteria 28600
176 Ga0436365_0748929 3300039437 Bacteria 3824
177 Ga0436365_1283794 3300039437 Bacteria 9095
178 Ga0436360_0202792 3300039438 Bacteria 2080
179 Ga0436360_0606826 3300039438 Bacteria 2698
180 Ga0436360_0904537 3300039438 Bacteria 4588
181 Ga0436360_1306478 3300039438 Bacteria 3031
182 Ga0436361_0416137 3300039447 Bacteria 2153
183 Ga0436362_0950021 3300039453 Unclassified 2319
184 Ga0436362_1150155 3300039453 Unclassified 3553
185 Ga0451577_0136234 3300042876 Unclassified 2205
186 Ga0453684_0011346 3300044712 Bacteria 14969
187 Ga0466967_0000696 3300045976 Bacteria 17102
188 Ga0495592_0007353 3300046454 Bacteria 8240
189 Ga0495629_0014855 3300046459 Bacteria 5602
190 Ga0495651_0065653 3300046462 Bacteria 2771
191 Ga0495651_0083055 3300046462 Bacteria 2416
192 Ga0495651_0100601 3300046462 Bacteria 2153
193 Ga0495662_0008687 3300046476 Bacteria 4993
194 Ga0495664_0000719 3300046477 Bacteria 16853
195 Ga0495664_0119678 3300046477 Bacteria 1593
196 Ga0495608_0000699 3300046511 Bacteria 23284
197 Ga0495608_0011984 3300046511 Bacteria 6032
198 Ga0495608_0034650 3300046511 Bacteria 3407
199 Ga0495618_0006068 3300046514 Bacteria 7331
200 Ga0495628_0015469 3300046516 Bacteria 6371
201 Ga0495628_0018095 3300046516 Bacteria 5843
202 Ga0495630_0006858 3300046517 Bacteria 8116
203 Ga0495666_0002362 3300046526 Bacteria 9412
204 Ga0495652_0024171 3300046529 Bacteria 5379
205 Ga0495640_0002581 3300046533 Bacteria 14557
206 Ga0495640_0018509 3300046533 Bacteria 5161
207 Ga0495640_0077507 3300046533 Bacteria 2216
208 Ga0495586_0003540 3300046535 Bacteria 8368
209 Ga0495587_0006616 3300046536 Bacteria 7547
210 Ga0495645_0001051 3300046543 Bacteria 18796
211 Ga0495645_0053005 3300046543 Bacteria 2950
212 Ga0495667_0008251 3300046559 Bacteria 7061
213 Ga0495667_0027751 3300046559 Bacteria 3812
214 Ga0495634_0002579 3300046642 Bacteria 14950
215 Ga0495635_0017737 3300046663 Plasmid 4972
216 Ga0495635_0020256 3300046663 Bacteria 4634
217 Ga0495659_0019989 3300046664 Bacteria 2245
218 Ga0495623_0070277 3300046679 Bacteria 2181
219 Ga0495658_0002852 3300046683 Bacteria 8688
220 Ga0495613_0003814 3300046689 Bacteria 11293
221 Ga0495624_0010120 3300046690 Bacteria 6503
222 Ga0495600_0103210 3300046809 Unclassified 1858
223 Ga0495604_0000911 3300047317 Bacteria 24567
224 Ga0495636_0028825 3300047318 Bacteria 2265
225 Ga0495680_0003156 3300047322 Bacteria 16416
226 Ga0495680_0027940 3300047322 Bacteria 4629
227 Ga0495675_0006001 3300047444 Bacteria 7428
228 Ga0495675_0128340 3300047444 Bacteria 1577
229 Ga0495602_0001050 3300048088 Bacteria 26998
230 Ga0496102_0011632 3300048905 Bacteria 7595
231 Ga0496103_0054164 3300048906 Bacteria 2486
232 Ga0496106_0006540 3300048909 Bacteria 8628
233 Ga0496107_0004561 3300048910 Bacteria 9384
234 Ga0496110_0001623 3300048913 Bacteria 16484
235 Ga0496110_0099765 3300048913 Bacteria 2603
236 Ga0496112_0154729 3300048915 Bacteria 2260
237 Ga0496114_0023496 3300048917 Bacteria 5031
238 Ga0496118_0041656 3300048921 Bacteria 3632
239 Ga0496119_0007336 3300048922 Bacteria 9970
240 Ga0496121_0003730 3300048924 Bacteria 21352
241 Ga0501031_0005747 3300049568 Bacteria 8080
242 Ga0501032_0003490 3300049569 Bacteria 12020
243 Ga0501033_0000496 3300049570 Bacteria 37079
244 Ga0501034_0002494 3300049571 Bacteria 22085
245 Ga0501034_0013107 3300049571 Bacteria 8542
246 Ga0501036_0000354 3300049572 Bacteria 32340
247 Ga0501037_0001293 3300049573 Bacteria 18401
248 Ga0501038_0001403 3300049574 Bacteria 22046
249 Ga0501039_0000808 3300049575 Bacteria 22572
250 Ga0501040_0009520 3300049576 Bacteria 6337
251 Ga0501040_0016202 3300049576 Bacteria 4928
252 Ga0501043_0001281 3300049579 Bacteria 22063
253 Ga0501047_0001889 3300049581 Bacteria 20137
254 Ga0501048_0075314 3300049582 Bacteria 2381
255 Ga0501069_0003553 3300049585 Bacteria 8026
256 Ga0501070_0031466 3300049586 Bacteria 4446
257 Ga0501072_0023234 3300049588 Bacteria 4815
258 Ga0501074_0004356 3300049590 Bacteria 10109
259 Ga0501075_0001439 3300049591 Bacteria 15475
260 Ga0501076_0067945 3300049592 Unclassified 2847
261 Ga0501079_0051610 3300049741 Unclassified 3176
262 Ga0501081_0028484 3300049743 Bacteria 3770
263 Ga0501081_0066373 3300049743 Bacteria 2509
264 Ga0501081_0162217 3300049743 Unclassified 1611
265 Ga0501035_0001741 3300049822 Bacteria 21987
266 Ga0501044_0002819 3300049823 Bacteria 19810
267 Ga0501044_0019030 3300049823 Bacteria 7352
268 nmdc:mga00v17_45951_c1 3300050491 Bacteria 2640
269 nmdc:mga05p37_19751_c1 3300050507 Bacteria 8151
270 nmdc:mga05p37_29130_c1 3300050507 Bacteria 6739
271 nmdc:mga05p37_64571_c1 3300050507 Bacteria 4505
272 nmdc:mga09592_6506_c2 3300050508 Bacteria 7687
273 nmdc:mga06r32_274788_c1 3300050510 Bacteria 1672
274 nmdc:mga06r32_32719_c1 3300050510 Bacteria 4895
275 nmdc:mga08y16_1801_c1 3300050511 Bacteria 21726
276 nmdc:mga08y16_26321_c1 3300050511 Bacteria 6133
277 nmdc:mga08y16_28169_c2 3300050511 Bacteria 5595
278 nmdc:mga0n895_7117_c1 3300050512 Bacteria 9565
279 nmdc:mga08x19_4641_c1 3300050514 Bacteria 8152
280 nmdc:mga0a205_165486_c1 3300050515 Bacteria 2107
281 Ga0495601_0005091 3300053077 Bacteria 7631
282 Ga0495601_0025502 3300053077 Bacteria 3646
283 Ga0495601_0026453 3300053077 Bacteria 3583
284 Ga0495612_0001932 3300053078 Bacteria 8533
285 Ga0495612_0006356 3300053078 Bacteria 4866
286 Ga0500616_0011292 3300053153 Bacteria 5288
287 Ga0500619_000050 3300053154 Bacteria 36425
288 Ga0530510_0046000 3300061734 Unclassified 3153
289 Ga0530510_0061260 3300061734 Bacteria 2724
290 Ga0530510_0136962 3300061734 Unclassified 1803
291 2753765914 2751185897 Bacteria 5322941
292 2854916101 2854911287 Bacteria 5582813
293 Ga0436364_0380175
294 rootH2_10021968
295 JGI25407J50210_10012674
296 Ga0070658_10018004
297 Ga0070683_100000850
298 Ga0070683_100014142
299 Ga0070670_100004001
300 Ga0070666_10067872
301 Ga0070680_100030790
302 Ga0068868_100005626
303 Ga0070689_100005426
304 Ga0070691_10006951
305 Ga0070661_100003892
306 Ga0070675_100039931
307 Ga0070671_100001341
308 Ga0070673_100003613
309 Ga0070667_100035105
310 Ga0070703_10004605
311 Ga0070709_10041892
312 Ga0070714_100009643
313 Ga0070714_100096494
314 Ga0070713_100043084
315 Ga0070710_10032516
316 Ga0070711_100100285
317 Ga0070705_100000280
318 Ga0070705_100027388
319 Ga0070700_100000800
320 Ga0070694_100003068
321 Ga0070694_100074546
322 Ga0070708_100059903
323 Ga0070678_100002134
324 Ga0070662_100055242
325 Ga0070681_10030377
326 Ga0070681_10058709
327 Ga0068867_100022501
328 Ga0070706_100043504
329 Ga0070706_100164853
330 Ga0070707_100001809
331 Ga0070707_100019730
332 Ga0070707_100071003
333 Ga0070698_100022364
334 Ga0070698_100060236
335 Ga0070698_100103954
336 Ga0070698_100139164
337 Ga0070699_100001385
338 Ga0070699_100007007
339 Ga0070699_100014961
340 Ga0070679_100052819
341 Ga0070679_100199032
342 Ga0070684_100107438
343 Ga0070672_100017247
344 Ga0070686_100006054
345 Ga0070695_100007601
346 Ga0070696_100000420
347 Ga0068855_100042984
348 Ga0068855_100052899
349 Ga0068855_100111490
350 Ga0070664_100001067
351 Ga0070664_100081062
352 Ga0068857_100039848
353 Ga0068857_100135536
354 Ga0068859_100001793
355 Ga0068864_100053033
356 Ga0068851_10018445
357 Ga0068860_100001979
358 Ga0081455_10003911
359 Ga0081455_10028801
360 Ga0081538_10007091
361 Ga0081538_10030958
362 Ga0070717_10101535
363 Ga0075364_10067265
364 Ga0070716_100059919
365 Ga0070712_100087628
366 Ga0097621_100003120
367 Ga0068871_100001807
368 Ga0075430_100026201
369 Ga0075431_100005793
370 Ga0097620_100001793
371 Ga0099794_10023759
372 Ga0099795_10020385
373 Ga0111539_10001848
374 Ga0111539_10017506
375 Ga0114129_10266100
376 Ga0105248_10040847
377 Ga0105248_10080691
378 Ga0105246_10052798
379 Ga0157374_10059302
380 Ga0157378_10086295
381 Ga0163162_10011588
382 Ga0163162_10067741
383 Ga0157375_10025007
384 Ga0163163_10233270
385 Ga0182008_10000288
386 Ga0157377_10025584
387 Ga0182007_10000119
388 Ga0213876_10006516
389 Ga0213876_10017306
390 Ga0213875_10000081
391 Ga0213875_10002110
392 Ga0207656_10006099
393 Ga0207699_10019846
394 Ga0207684_10172629
395 Ga0207684_10191996
396 Ga0207707_10033446
397 Ga0207693_10009452
398 Ga0207693_10038316
399 Ga0207663_10028571
400 Ga0207663_10060790
401 Ga0207660_10000964
402 Ga0207649_10017728
403 Ga0207646_10014181
404 Ga0207646_10062879
405 Ga0207646_10094433
406 Ga0207646_10106725
407 Ga0207650_10001044
408 Ga0207659_10072827
409 Ga0207664_10044223
410 Ga0207664_10111589
411 Ga0207644_10001830
412 Ga0207670_10021744
413 Ga0207665_10150577
414 Ga0207691_10011657
415 Ga0207711_10053535
416 Ga0207679_10008182
417 Ga0207667_10020825
418 Ga0207651_10013519
419 Ga0207640_10004438
420 Ga0207677_10068337
421 Ga0207678_10040323
422 Ga0207708_10002182
423 Ga0207708_10032547
424 Ga0207676_10048607
425 Ga0207676_10082245
426 Ga0207683_10002745
427 Ga0207698_10000870
428 Ga0209588_1025680
429 Ga0209974_10013653
430 Ga0209974_10014327
431 Ga0207428_10000213
432 Ga0268265_10001718
433 Ga0265325_10011505
434 Ga0265331_10005356
435 Ga0265316_10048680
436 Ga0307507_10050492
437 Ga0373934_0025050
438 Ga0373953_0004481
439 Ga0373954_0012481
440 Ga0373956_0008143
441 Ga0373957_0003530
442 Ga0373955_0006709
443 Ga0373955_0089117
444 Ga0373962_0004088
445 Ga0373924_0002617
446 Ga0373935_0022646
447 Ga0373933_0002111
448 Ga0373933_0004416
449 Ga0373933_0017625
450 Ga0373933_0031843
451 Ga0373947_0024530
452 Ga0373937_0001507
453 Ga0373937_0003546
454 Ga0373937_0005823
455 Ga0373937_0010769
456 Ga0373937_0019181
457 Ga0373937_0108978
458 Ga0316584_0120824
459 Ga0395898_0027220
460 Ga0436364_0051340
461 Ga0436364_0052069
462 Ga0436364_0097713
463 Ga0436364_0560002
464 Ga0436364_0616448
465 Ga0436364_0647301
466 Ga0436364_0664634
467 Ga0436364_0881244
468 Ga0436365_0748929
469 Ga0436365_1283794
470 Ga0436360_0202792
471 Ga0436360_0606826
472 Ga0436360_0904537
473 Ga0436360_1306478
474 Ga0436361_0416137
475 Ga0436362_0950021
476 Ga0436362_1150155
477 Ga0451577_0136234
478 Ga0453684_0011346
479 Ga0466967_0000696
480 Ga0495592_0007353
481 Ga0495629_0014855
482 Ga0495651_0065653
483 Ga0495651_0083055
484 Ga0495651_0100601
485 Ga0495662_0008687
486 Ga0495664_0000719
487 Ga0495664_0119678
488 Ga0495608_0000699
489 Ga0495608_0011984
490 Ga0495608_0034650
491 Ga0495618_0006068
492 Ga0495628_0015469
493 Ga0495628_0018095
494 Ga0495630_0006858
495 Ga0495666_0002362
496 Ga0495652_0024171
497 Ga0495640_0002581
498 Ga0495640_0018509
499 Ga0495640_0077507
500 Ga0495586_0003540
501 Ga0495587_0006616
502 Ga0495645_0001051
503 Ga0495645_0053005
504 Ga0495667_0008251
505 Ga0495667_0027751
506 Ga0495634_0002579
507 Ga0495635_0017737
508 Ga0495635_0020256
509 Ga0495659_0019989
510 Ga0495623_0070277
511 Ga0495658_0002852
512 Ga0495613_0003814
513 Ga0495624_0010120
514 Ga0495600_0103210
515 Ga0495604_0000911
516 Ga0495636_0028825
517 Ga0495680_0003156
518 Ga0495680_0027940
519 Ga0495675_0006001
520 Ga0495675_0128340
521 Ga0495602_0001050
522 Ga0496102_0011632
523 Ga0496103_0054164
524 Ga0496106_0006540
525 Ga0496107_0004561
526 Ga0496110_0001623
527 Ga0496110_0099765
528 Ga0496112_0154729
529 Ga0496114_0023496
530 Ga0496118_0041656
531 Ga0496119_0007336
532 Ga0496121_0003730
533 Ga0501031_0005747
534 Ga0501032_0003490
535 Ga0501033_0000496
536 Ga0501034_0002494
537 Ga0501034_0013107
538 Ga0501036_0000354
539 Ga0501037_0001293
540 Ga0501038_0001403
541 Ga0501039_0000808
542 Ga0501040_0009520
543 Ga0501040_0016202
544 Ga0501043_0001281
545 Ga0501047_0001889
546 Ga0501048_0075314
547 Ga0501069_0003553
548 Ga0501070_0031466
549 Ga0501072_0023234
550 Ga0501074_0004356
551 Ga0501075_0001439
552 Ga0501076_0067945
553 Ga0501079_0051610
554 Ga0501081_0028484
555 Ga0501081_0066373
556 Ga0501081_0162217
557 Ga0501035_0001741
558 Ga0501044_0002819
559 Ga0501044_0019030
560 nmdc:mga00v17_45951_c1
561 nmdc:mga05p37_19751_c1
562 nmdc:mga05p37_29130_c1
563 nmdc:mga05p37_64571_c1
564 nmdc:mga09592_6506_c2
565 nmdc:mga06r32_274788_c1
566 nmdc:mga06r32_32719_c1
567 nmdc:mga08y16_1801_c1
568 nmdc:mga08y16_26321_c1
569 nmdc:mga08y16_28169_c2
570 nmdc:mga0n895_7117_c1
571 nmdc:mga08x19_4641_c1
572 nmdc:mga0a205_165486_c1
573 Ga0495601_0005091
574 Ga0495601_0025502
575 Ga0495601_0026453
576 Ga0495612_0001932
577 Ga0495612_0006356
578 Ga0500616_0011292
579 Ga0500619_000050
580 Ga0530510_0046000
581 Ga0530510_0061260
582 Ga0530510_0136962
583 2753765914
584 2854916101

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00205

TPP_enzyme_M

Thiamine pyrophosphate enzyme, central domain

277

412

0.95

PF02775

TPP_enzyme_C

Thiamine pyrophosphate enzyme, C-terminal TPP binding domain

472

624

0.92

PF02776

TPP_enzyme_N

Thiamine pyrophosphate enzyme, N-terminal TPP binding domain

82

196

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
6lpi-assembly3.cif.gz_C crystal structure of ahas holo-enzyme 0.8685 6 546
6lpi-assembly4.cif.gz_D crystal structure of ahas holo-enzyme 0.8653 6 546
6lpi-assembly2.cif.gz_B crystal structure of ahas holo-enzyme 0.864 1 542
6lpi-assembly1.cif.gz_A crystal structure of ahas holo-enzyme 0.8629 6 542
3eya-assembly2.cif.gz_G structural basis for membrane binding and catalytic activation of the peripheral membrane enzyme pyruvate oxidase from escherichia coli 0.8602 5 542
ID Description Score Start End Superfamily
af_Q2FV86_182_336_3.40.50.1220 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain 0.9459 189 348 3.40.50.1220
af_P08142_199_364_3.40.50.1220 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain 0.9342 198 358 3.40.50.1220
af_P0DP89_182_327_3.40.50.1220 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain 0.9322 195 335 3.40.50.1220
af_Q2FV86_182_336_3.40.50.1220 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain 0.9284 189 348 3.40.50.1220
af_Q54DA9_1_176_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9064 6 172 3.40.50.970
ID Description Score Start End GO Terms
AF-A0A7X1P8W1-F1-model_v4 Thiamine pyrophosphate enzyme central domain-containing protein 0.9734 239 370 GO:0000287
GO:0003984
GO:0005948
GO:0009097
GO:0009099
GO:0030976
GO:0050660
AF-A0A355B8A1-F1-model_v4 Acetolactate synthase 0.9504 5 548 GO:0000287
GO:0003984
GO:0005948
GO:0009097
GO:0009099
GO:0030976
GO:0050660
AF-A0A6N8UWH6-F1-model_v4 Thiamine pyrophosphate-binding protein 0.9493 6 471 GO:0000287
GO:0003984
GO:0005948
GO:0009097
GO:0009099
GO:0030976
GO:0050660
AF-A0A800AD02-F1-model_v4 Thiamine pyrophosphate-binding protein 0.947 6 548 GO:0000287
GO:0003984
GO:0005948
GO:0009097
GO:0009099
GO:0030976
GO:0050660
AF-A0A3N5N1P2-F1-model_v4 Thiamine pyrophosphate-binding protein 0.947 6 146 GO:0003984
GO:0005948
GO:0009097
GO:0009099
GO:0030976
GO:0050660

Map