F388908

General Info

Members Datasets Scaffolds Average Seq Length
288 237 259 558

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2857542790|2857544535
Length 588
Sequence PGTLWTNMYQYDEVDQQLVEERVTQFSDQMQRFLAGDLSEDDFRPLRLQNGLYIQRHAPMLRVAIPYGLLSAEQLRMLGHIARTWDRGYGHFSTRQNIQFNWPSLEDTPKILAALATVQMHAIQTSGNCIRNTTTDHFAGVAPDEIVDPLVWCEIIRQWSTFHPEFAFLPRKFKIAVSGSPSDRAAVGVHDIGLQADTVDGVIGFRVAVGGGMGRTPIVGKVIRNFLPWYDLLTYLQAILRVYNLHGRRDNKYKARIKILVKDLTPEVFGEQVEREWQHIKDGPNKLTQADLDAIATRFTTPAYDADAAQAPDPTPALAAEQPTFARWLRKNVHPHREPGYACVTLSLKETGVPPGDLTADQMDAVADLADAFSAGEMRVSHEQNLIFAHVRQSDLPALWEKLTPLGLAHANIGLINNIIACPGGDFCALANAVSIPVAESIQRRFDNLDYQFEIGELDLNISGCINSCGHHHVGHIGILGVDKGGEEWYQVTIGGRQSAGPGEHLDAKGVIRPGGAAIGKIIGPSFARDEVPDVVETLIQTYLKLRDSDAERFVDVVGRVGLDPFKTDVYGDARKNLIAQQQGAVHA

Samples

Sample ID Description Type Environment
1 2547132103 Chromobacterium sp. C-61 Isolate Rhizosphere
2 2596583598 Ralstonia sp. UNCCL144 Isolate Unclassified
3 2599185178 Ralstonia sp. NFACC01 Isolate Rhizoplane
4 2599185292 Achromobacter sp. NFACC18-2 Isolate Rhizoplane
5 2643221550 Mesorhizobium sp. Root552 Isolate Unclassified
6 2643221554 Duganella sp. Root1480D1 Isolate Unclassified
7 2643221564 Mesorhizobium sp. Root157 Isolate Unclassified
8 2643221569 Achromobacter sp. Root565 Isolate Unclassified
9 2643221594 Achromobacter sp. Root170 Isolate Unclassified
10 2643221621 Achromobacter sp. Root83 Isolate Unclassified
11 2643221689 Rhizobium sp. Root483D2 Isolate Unclassified
12 2808606395 Achromobacter sp. SLBN-14 Isolate Unclassified
13 2818991461 Neorhizobium alkalisoli 1225 Isolate Unclassified
14 2843690924 Chromobacterium rhizoryzae JP2-74 Isolate Rhizosphere
15 2846033681 Chromobacterium sinusclupearum MWU13-2610 Isolate Rhizosphere
16 2855730933 Achromobacter sp. HZ28 Isolate Nodule
17 2855767633 Achromobacter sp. HZ34 Isolate Nodule
18 2857537821 Achromobacter sp. R-71975 Isolate Unclassified
19 2857542790 Achromobacter sp. R-72367 Isolate Unclassified
20 2857576091 Pigmentiphaga sp. R-72090 Isolate Unclassified
21 2858688981 Cupriavidus sp. UYMMa02A Isolate Unclassified
22 2858950400 Achromobacter sp. K91 Isolate Unclassified
23 2881412998 Achromobacter aloeverae AVA-1 Isolate Unclassified
24 2885266251 Ralstonia sp. SET104 Isolate Nodule
25 2900577576 Ralstonia sp. TCR112 Isolate Rhizosphere
26 2919171160 Neorhizobium sp. 2083 Isolate Unclassified
27 2928058823 Ralstonia sp. 1138 Isolate Unclassified
28 2941479691
29 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
30 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
31 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
32 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
33 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
34 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
35 3300003479 Arabidopsis rhizosphere microbial communities from the University of North Carolina, USA - metaT NBMF1_06_lowP_mix1_d1 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
36 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
37 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
38 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
39 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
40 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
41 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
42 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
43 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
44 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
45 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
46 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
47 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
48 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
49 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
50 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
51 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
52 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
53 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
54 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
55 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
56 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
57 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
58 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
59 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
60 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
61 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
62 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
63 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
64 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
65 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
66 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
67 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
68 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
69 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
70 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
71 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
72 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
73 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
74 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
75 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
76 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
77 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
78 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
79 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
80 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
81 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
82 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
83 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
84 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
85 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
86 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
87 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
88 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
89 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
90 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
91 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
92 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
93 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
94 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
95 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
96 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
97 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
98 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
99 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
100 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
101 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
102 3300020076 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) Metatranscriptome Rhizosphere
103 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
104 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
105 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
106 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
107 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
108 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
109 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
110 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
111 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
112 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
113 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
114 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
115 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
116 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
117 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
118 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
119 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
120 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
121 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
122 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
123 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
124 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
125 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
137 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
138 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
139 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
140 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
141 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
142 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
143 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
144 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
145 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
146 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
147 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
148 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
149 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
150 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
151 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
152 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
153 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
154 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
155 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
156 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
157 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
158 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
159 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
160 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
161 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
162 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
163 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
164 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
165 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
166 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
167 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
168 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
169 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
170 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
171 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
172 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
173 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
174 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
175 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
176 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
177 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
178 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
179 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
180 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
181 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
182 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
183 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
184 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
185 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
186 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
187 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
188 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
189 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
190 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
191 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
192 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
193 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
194 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
195 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
196 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
197 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
198 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
199 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
200 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
201 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
202 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
203 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
204 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
205 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
206 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
207 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
208 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
209 3300049527 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
210 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
211 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
212 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
213 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
214 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
215 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
216 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
217 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
218 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
219 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
220 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
221 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
222 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
223 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
224 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
225 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
226 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
227 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
228 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
229 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
230 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
231 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
232 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
233 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
234 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
235 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
236 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
237 8054563764 Acuticoccus kalidii M5D2P5 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 88.19
Metatranscriptomes 1.74
Isolates 10.07

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 15.62
Nodule 1.04
Rhizoplane 1.39
Rhizosphere 68.4
Stem 0
Stem Tuber 0
Unclassified 13.54

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1001077 3300001915 Bacteria 8165
2 JGI24740J21852_10000051 3300001979 Bacteria 37529
3 JGI24740J21852_10000400 3300001979 Bacteria 18646
4 JGI25156J39149_1009307 3300002705 Bacteria 2399
5 JGI25154J39366_1000429 3300002738 Bacteria 22507
6 JGI25152J39213_1004595 3300002773 Bacteria 4300
7 JGI25151J46595_10000077 3300003187 Bacteria 133862
8 Ga0006556J51387_1026861 3300003479 Bacteria 5423
9 Ga0055539_1000321 3300003752 Bacteria 24630
10 Ga0055533_1000879 3300003756 Bacteria 9093
11 Ga0055532_1000008 3300003758 Bacteria 404753
12 Ga0055525_1000169 3300003759 Bacteria 83336
13 Ga0055527_1000510 3300003760 Bacteria 13509
14 Ga0055535_1000006 3300003761 Bacteria 404753
15 Ga0055542_1000956 3300003762 Bacteria 18924
16 Ga0055529_1000030 3300003763 Bacteria 272455
17 Ga0055530_10003843 3300003791 Bacteria 8234
18 Ga0055541_1001126 3300003841 Bacteria 5997
19 Ga0065704_10113606 3300005289 Bacteria 1908
20 Ga0065707_10083220 3300005295 Bacteria 9947
21 Ga0070670_100006242 3300005331 Bacteria 10083
22 Ga0070670_100094290 3300005331 Bacteria 2574
23 Ga0070661_100000002 3300005344 Bacteria 265686
24 Ga0070668_100007050 3300005347 Bacteria 8329
25 Ga0070675_100016218 3300005354 Bacteria 5911
26 Ga0070675_100081781 3300005354 Bacteria 2694
27 Ga0070671_100099678 3300005355 Bacteria 2437
28 Ga0070659_100000608 3300005366 Bacteria 26248
29 Ga0070667_100092209 3300005367 Bacteria 2606
30 Ga0070663_100000007 3300005455 Bacteria 202632
31 Ga0070706_100092220 3300005467 Bacteria 2810
32 Ga0070707_100102784 3300005468 Bacteria 2769
33 Ga0070698_100109268 3300005471 Bacteria 2732
34 Ga0070699_100152049 3300005518 Bacteria 2048
35 Ga0070672_100003234 3300005543 Bacteria 10548
36 Ga0070672_100083592 3300005543 Bacteria 2562
37 Ga0070695_100029671 3300005545 Bacteria 3400
38 Ga0070693_100003443 3300005547 Bacteria 7382
39 Ga0070693_100016260 3300005547 Bacteria 3847
40 Ga0070665_100131133 3300005548 Bacteria 2509
41 Ga0070704_100022819 3300005549 Bacteria 4077
42 Ga0070664_100000001 3300005564 Bacteria 551832
43 Ga0068854_100000185 3300005578 Bacteria 42068
44 Ga0068856_100000007 3300005614 Bacteria 213669
45 Ga0068856_100111837 3300005614 Bacteria 2729
46 Ga0068859_100004852 3300005617 Bacteria 13683
47 Ga0068859_100126935 3300005617 Bacteria 2620
48 Ga0068864_100001812 3300005618 Bacteria 17534
49 Ga0068864_100009515 3300005618 Bacteria 8021
50 Ga0068866_10005447 3300005718 Bacteria 5252
51 Ga0068861_100007883 3300005719 Bacteria 7328
52 Ga0068861_100011195 3300005719 Bacteria 6229
53 Ga0068858_100024662 3300005842 Bacteria 5601
54 Ga0068860_100005312 3300005843 Bacteria 13077
55 Ga0068860_100041672 3300005843 Bacteria 4386
56 Ga0068862_100050022 3300005844 Bacteria 3571
57 Ga0075364_10000328 3300006051 Bacteria 23550
58 Ga0075364_10017205 3300006051 Bacteria 4512
59 Ga0075366_10003598 3300006195 Bacteria 8207
60 Ga0097621_100035526 3300006237 Bacteria 3983
61 Ga0068871_100158318 3300006358 Bacteria 1935
62 Ga0075430_100011263 3300006846 Bacteria 7587
63 Ga0075433_10069395 3300006852 Bacteria 3096
64 Ga0075434_100054644 3300006871 Bacteria 3967
65 Ga0075429_100001374 3300006880 Bacteria 19911
66 Ga0075436_100069000 3300006914 Bacteria 2443
67 Ga0097620_100004852 3300006931 Bacteria 13683
68 Ga0097620_100126927 3300006931 Bacteria 2620
69 Ga0075435_100020372 3300007076 Bacteria 5081
70 Ga0099795_10000034 3300007788 Bacteria 36525
71 Ga0105240_10156530 3300009093 Bacteria 2709
72 Ga0114129_10016719 3300009147 Bacteria 10449
73 Ga0105242_10014642 3300009176 Bacteria 6072
74 Ga0105242_10037781 3300009176 Bacteria 3881
75 Ga0105248_10308366 3300009177 Bacteria 1782
76 Ga0157373_10121759 3300013100 Bacteria 1834
77 Ga0157371_10000035 3300013102 Bacteria 223396
78 Ga0157370_10000161 3300013104 Bacteria 82233
79 Ga0157369_10000908 3300013105 Bacteria 37806
80 Ga0157369_10007348 3300013105 Bacteria 12683
81 Ga0157378_10063281 3300013297 Bacteria 3305
82 Ga0157372_10000522 3300013307 Bacteria 42436
83 Ga0157375_10022936 3300013308 Bacteria 5752
84 Ga0157375_10106193 3300013308 Bacteria 2900
85 Ga0163163_10006142 3300014325 Bacteria 10467
86 Ga0163163_10016590 3300014325 Bacteria 6850
87 Ga0157380_10042793 3300014326 Bacteria 3542
88 Ga0157376_10003536 3300014969 Bacteria 10772
89 Ga0182006_1003037 3300015261 Bacteria 8826
90 Ga0206355_1624367 3300020076 Bacteria 4540
91 Ga0206351_10600043 3300020077 Bacteria 7842
92 Ga0154015_1157012 3300020610 Bacteria 7194
93 Ga0209784_100014 3300025224 Bacteria 496182
94 Ga0209784_100269 3300025224 Bacteria 30295
95 Ga0209566_100011 3300025225 Bacteria 496182
96 Ga0209566_100591 3300025225 Bacteria 22954
97 Ga0209674_100032 3300025226 Bacteria 426888
98 Ga0209674_100304 3300025226 Bacteria 33311
99 Ga0209672_100094 3300025228 Bacteria 113800
100 Ga0209147_100002 3300025229 Bacteria 2158988
101 Ga0209563_100029 3300025230 Bacteria 496182
102 Ga0209258_100002 3300025242 Bacteria 2158988
103 Ga0207425_1000017 3300025245 Bacteria 423851
104 Ga0209646_1000035 3300025246 Bacteria 363209
105 Ga0209677_100081 3300025253 Bacteria 120362
106 Ga0209677_105525 3300025253 Bacteria 3273
107 Ga0209148_1000158 3300025254 Bacteria 140830
108 Ga0209759_1001953 3300025256 Bacteria 9935
109 Ga0209129_1000039 3300025258 Bacteria 322444
110 Ga0209455_1000009 3300025272 Bacteria 1042273
111 Ga0209130_1000491 3300025284 Bacteria 40619
112 Ga0209025_1000003 3300025294 Bacteria 1366495
113 Ga0209564_1002252 3300025295 Bacteria 15819
114 Ga0209758_1000155 3300025297 Bacteria 160455
115 Ga0209758_1000192 3300025297 Bacteria 136933
116 Ga0209050_1000762 3300025298 Bacteria 46324
117 Ga0209050_1005371 3300025298 Bacteria 8094
118 Ga0209050_1007825 3300025298 Bacteria 5877
119 Ga0209256_1000651 3300025299 Bacteria 47267
120 Ga0209256_1000744 3300025299 Bacteria 42676
121 Ga0207688_10044283 3300025901 Bacteria 2480
122 Ga0207695_10011976 3300025913 Bacteria 10436
123 Ga0207695_10016851 3300025913 Bacteria 8530
124 Ga0207695_10167117 3300025913 Bacteria 2127
125 Ga0207649_10001577 3300025920 Bacteria 13287
126 Ga0207646_10006617 3300025922 Bacteria 11962
127 Ga0207650_10004260 3300025925 Bacteria 9763
128 Ga0207650_10019328 3300025925 Bacteria 4784
129 Ga0207659_10016733 3300025926 Bacteria 4778
130 Ga0207690_10003122 3300025932 Bacteria 9974
131 Ga0207706_10067031 3300025933 Bacteria 3158
132 Ga0207686_10015950 3300025934 Bacteria 4210
133 Ga0207665_10074868 3300025939 Bacteria 2318
134 Ga0207691_10002303 3300025940 Bacteria 18711
135 Ga0207691_10004067 3300025940 Bacteria 14186
136 Ga0207691_10006730 3300025940 Bacteria 11083
137 Ga0207689_10007557 3300025942 Bacteria 9533
138 Ga0207679_10000003 3300025945 Bacteria 597553
139 Ga0207668_10016090 3300025972 Bacteria 4661
140 Ga0207668_10022282 3300025972 Bacteria 4053
141 Ga0207640_10000083 3300025981 Bacteria 74852
142 Ga0207703_10080179 3300026035 Bacteria 2718
143 Ga0207678_10000002 3300026067 Bacteria 371723
144 Ga0207641_10008422 3300026088 Bacteria 8524
145 Ga0207648_10096790 3300026089 Bacteria 2583
146 Ga0207676_10004319 3300026095 Bacteria 10052
147 Ga0207674_10008421 3300026116 Bacteria 11912
148 Ga0207674_10018408 3300026116 Bacteria 7593
149 Ga0207675_100005668 3300026118 Bacteria 11953
150 Ga0207675_100022495 3300026118 Bacteria 5870
151 Ga0207683_10008597 3300026121 Bacteria 8733
152 Ga0207698_10096679 3300026142 Bacteria 2435
153 Ga0209999_1003792 3300027543 Bacteria 2713
154 Ga0268266_10133893 3300028379 Bacteria 2219
155 Ga0268265_10086609 3300028380 Bacteria 2490
156 Ga0268264_10034405 3300028381 Bacteria 4168
157 Ga0265330_10012609 3300031235 Bacteria 3950
158 Ga0265332_10002629 3300031238 Bacteria 9050
159 Ga0265328_10036098 3300031239 Bacteria 1827
160 Ga0265331_10003290 3300031250 Bacteria 10506
161 Ga0265316_10005756 3300031344 Bacteria 11966
162 Ga0307509_10000053 3300031507 Bacteria 164364
163 Ga0307412_10000078 3300031911 Bacteria 94880
164 Ga0373926_0004501 3300035083 Bacteria 4571
165 Ga0373936_0007891 3300035113 Bacteria 3998
166 Ga0373945_0003007 3300035116 Bacteria 5302
167 Ga0373943_0003480 3300035170 Bacteria 7164
168 Ga0373935_0037018 3300035692 Bacteria 3052
169 Ga0373927_0011846 3300035695 Bacteria 5808
170 Ga0373937_0006843 3300036401 Bacteria 9837
171 Ga0373937_0011057 3300036401 Bacteria 7912
172 Ga0373937_0073098 3300036401 Bacteria 3163
173 Ga0373925_0047634 3300037068 Bacteria 3191
174 Ga0395899_0000044 3300037312 Bacteria 248735
175 Ga0395900_0000042 3300037418 Bacteria 242667
176 Ga0395900_0015924 3300037418 Bacteria 7661
177 Ga0395898_0000080 3300037466 Bacteria 242667
178 Ga0395905_0000044 3300037471 Bacteria 242916
179 Ga0395901_0000027 3300038443 Bacteria 244204
180 Ga0400483_034786 3300039062 Bacteria 4982
181 Ga0436361_0270077 3300039447 Bacteria 30158
182 Ga0466965_0007541 3300044683 Bacteria 5003
183 Ga0466961_0006267 3300044693 Bacteria 7552
184 Ga0466959_0002077 3300045049 Bacteria 12673
185 Ga0451576_0003580 3300045051 Bacteria 21130
186 Ga0495592_0007576 3300046454 Bacteria 8128
187 Ga0495603_0024444 3300046455 Bacteria 3654
188 Ga0495638_0007909 3300046460 Bacteria 7583
189 Ga0495580_0036734 3300046472 Bacteria 3516
190 Ga0495639_0023194 3300046475 Bacteria 2726
191 Ga0495607_0000920 3300046501 Bacteria 27401
192 Ga0495643_0010247 3300046522 Bacteria 5773
193 Ga0495586_0003011 3300046535 Bacteria 9088
194 Ga0495645_0003648 3300046543 Bacteria 10458
195 Ga0495667_0037396 3300046559 Bacteria 3235
196 Ga0495625_0019307 3300046660 Bacteria 5292
197 Ga0495635_0047238 3300046663 Bacteria 2970
198 Ga0495657_0045166 3300046675 Bacteria 2991
199 Ga0495623_0085865 3300046679 Bacteria 1940
200 Ga0495647_0000449 3300046681 Bacteria 11857
201 Ga0495658_0004573 3300046683 Bacteria 6807
202 Ga0495581_0033242 3300047315 Bacteria 2986
203 Ga0495636_0037015 3300047318 Bacteria 2014
204 Ga0495602_0025496 3300048088 Bacteria 5723
205 Ga0496111_0007590 3300048914 Bacteria 7121
206 Ga0496113_0091020 3300048916 Bacteria 2351
207 Ga0496116_0015024 3300048919 Bacteria 6140
208 Ga0496118_0067611 3300048921 Bacteria 2600
209 Ga0496119_0042945 3300048922 Bacteria 2862
210 Ga0496120_0015759 3300048923 Bacteria 4969
211 Ga0496121_0000153 3300048924 Bacteria 150635
212 Ga0496121_0012940 3300048924 Bacteria 9020
213 Ga0496121_0016871 3300048924 Bacteria 7509
214 Ga0496122_0000186 3300048925 Bacteria 144012
215 Ga0496123_0000162 3300048926 Bacteria 134316
216 Ga0496124_0000007 3300048927 Bacteria 883534
217 Ga0496124_0109904 3300048927 Bacteria 2220
218 Ga0496125_0000023 3300048928 Bacteria 449042
219 Ga0496125_0027034 3300048928 Bacteria 5210
220 Ga0501311_001538 3300049527 Bacteria 2033
221 Ga0501032_0000001 3300049569 Bacteria 422097
222 Ga0501033_0000092 3300049570 Bacteria 85398
223 Ga0501034_0000036 3300049571 Bacteria 239274
224 Ga0501034_0050836 3300049571 Bacteria 4179
225 Ga0501036_0000078 3300049572 Bacteria 60614
226 Ga0501036_0033378 3300049572 Bacteria 4353
227 Ga0501037_0000017 3300049573 Bacteria 157276
228 Ga0501038_0000036 3300049574 Bacteria 124766
229 Ga0501039_0000011 3300049575 Bacteria 245124
230 Ga0501040_0018590 3300049576 Bacteria 4615
231 Ga0501043_0000105 3300049579 Bacteria 78189
232 Ga0501047_0000740 3300049581 Bacteria 34045
233 Ga0501069_0005279 3300049585 Bacteria 6710
234 Ga0501070_0000215 3300049586 Bacteria 54743
235 Ga0501070_0000747 3300049586 Bacteria 29640
236 Ga0501070_0014406 3300049586 Bacteria 6652
237 Ga0501072_0099530 3300049588 Bacteria 2311
238 Ga0501075_0127834 3300049591 Bacteria 1935
239 Ga0501080_0000542 3300049742 Bacteria 29722
240 Ga0501035_0000028 3300049822 Bacteria 179195
241 Ga0501035_0000374 3300049822 Bacteria 51467
242 Ga0501035_0002288 3300049822 Bacteria 18934
243 Ga0501035_0003206 3300049822 Bacteria 15680
244 Ga0501044_0003331 3300049823 Bacteria 18108
245 Ga0501044_0004322 3300049823 Bacteria 15928
246 Ga0501044_0014562 3300049823 Bacteria 8483
247 Ga0501044_0023991 3300049823 Bacteria 6481
248 Ga0501045_0065123 3300049824 Bacteria 2676
249 nmdc:mga00v17_4707_c1 3300050491 Bacteria 7130
250 nmdc:mga00v17_56551_c1 3300050491 Bacteria 2399
251 nmdc:mga0k408_23802_c1 3300050493 Bacteria 3459
252 nmdc:mga05p37_261_c1 3300050507 Bacteria 54694
253 nmdc:mga09592_119_c1 3300050508 Bacteria 50089
254 nmdc:mga06r32_2251_c1 3300050510 Bacteria 17269
255 nmdc:mga06r32_234189_c1 3300050510 Bacteria 1824
256 nmdc:mga0n895_125899_c1 3300050512 Bacteria 2586
257 nmdc:mga0rr50_8033_c1 3300050513 Bacteria 6543
258 nmdc:mga0a205_92302_c1 3300050515 Bacteria 2925
259 Ga0500616_0001898 3300053153 Bacteria 18735

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046455 Ga0495603_0024444 Ga0495603_0024444_12_1373 434
2 3300046660 Ga0495625_0019307 Ga0495625_0019307_3745_5256 496
3 3300039062 Ga0400483_034786 Ga0400483_034786_1272_2930 529
4 iso_pu_bacteria 8054563764 8054564927 538
5 3300007076 Ga0075435_100020372 Ga0075435_1000203723 542
6 3300027543 Ga0209999_1003792 Ga0209999_10037922 542
7 3300050512 nmdc:mga0n895_125899_c1 nmdc:mga0n895_125899_c1_142_1779 542
8 3300050513 nmdc:mga0rr50_8033_c1 nmdc:mga0rr50_8033_c1_1988_3625 542
9 3300006871 Ga0075434_100054644 Ga0075434_1000546442 543
10 3300048914 Ga0496111_0007590 Ga0496111_0007590_3384_5024 543
11 3300048916 Ga0496113_0091020 Ga0496113_0091020_113_1753 543
12 3300050515 nmdc:mga0a205_92302_c1 nmdc:mga0a205_92302_c1_601_2277 544
13 iso_pu_bacteria 2643221554 2643787994 544
14 3300006195 Ga0075366_10003598 Ga0075366_100035987 545
15 3300007788 Ga0099795_10000034 Ga0099795_1000003421 545
16 3300036401 Ga0373937_0006843 Ga0373937_0006843_2090_3745 545
17 3300046679 Ga0495623_0085865 Ga0495623_0085865_269_1924 545
18 3300048088 Ga0495602_0025496 Ga0495602_0025496_1152_2807 545
19 3300049572 Ga0501036_0033378 Ga0501036_0033378_1481_3157 545
20 3300049576 Ga0501040_0018590 Ga0501040_0018590_510_2186 545
21 3300050493 nmdc:mga0k408_23802_c1 nmdc:mga0k408_23802_c1_133_1887 545
22 3300035083 Ga0373926_0004501 Ga0373926_0004501_2095_3792 546
23 3300035113 Ga0373936_0007891 Ga0373936_0007891_1049_2746 546
24 3300035116 Ga0373945_0003007 Ga0373945_0003007_911_2608 546
25 3300035170 Ga0373943_0003480 Ga0373943_0003480_4395_6092 546
26 3300035692 Ga0373935_0037018 Ga0373935_0037018_1306_3003 546
27 3300035695 Ga0373927_0011846 Ga0373927_0011846_736_2433 546
28 3300037068 Ga0373925_0047634 Ga0373925_0047634_391_2088 546
29 3300046472 Ga0495580_0036734 Ga0495580_0036734_1385_3082 546
30 3300046475 Ga0495639_0023194 Ga0495639_0023194_51_1748 546
31 3300046535 Ga0495586_0003011 Ga0495586_0003011_1614_3311 546
32 3300046681 Ga0495647_0000449 Ga0495647_0000449_7405_9102 546
33 3300046683 Ga0495658_0004573 Ga0495658_0004573_4608_6305 546
34 3300047315 Ga0495581_0033242 Ga0495581_0033242_307_2004 546
35 iso_pu_bacteria 2643221564 2643840140 546
36 iso_pu_bacteria 2857576091 2857579855 546
37 iso_pu_bacteria 2547132103 2547375327 547
38 iso_pu_bacteria 2643221689 2644499093 547
39 iso_pu_bacteria 2818991461 2819687389 547
40 iso_pu_bacteria 2843690924 2843694302 547
41 iso_pu_bacteria 2846033681 2846036092 547
42 iso_pu_bacteria 2855730933 2855736843 547
43 iso_pu_bacteria 2855767633 2855773780 547
44 iso_pu_bacteria 2858688981 2858695544 547
45 iso_pu_bacteria 2881412998 2881417586 547
46 iso_pu_bacteria 2919171160 2919175313 547
47 3300003791 Ga0055530_10003843 Ga0055530_100038432 548
48 3300005289 Ga0065704_10113606 Ga0065704_101136061 548
49 3300005295 Ga0065707_10083220 Ga0065707_100832206 548
50 3300005719 Ga0068861_100007883 Ga0068861_1000078836 548
51 3300006846 Ga0075430_100011263 Ga0075430_1000112635 548
52 3300014326 Ga0157380_10042793 Ga0157380_100427933 548
53 3300025245 Ga0207425_1000017 Ga0207425_1000017392 548
54 3300025258 Ga0209129_1000039 Ga0209129_10000397 548
55 3300025284 Ga0209130_1000491 Ga0209130_100049138 548
56 3300025295 Ga0209564_1002252 Ga0209564_10022528 548
57 3300025297 Ga0209758_1000192 Ga0209758_10001927 548
58 3300025298 Ga0209050_1000762 Ga0209050_100076234 548
59 3300025299 Ga0209256_1000651 Ga0209256_100065134 548
60 3300025299 Ga0209256_1000744 Ga0209256_100074435 548
61 3300026118 Ga0207675_100005668 Ga0207675_1000056685 548
62 3300031344 Ga0265316_10005756 Ga0265316_100057567 548
63 3300046460 Ga0495638_0007909 Ga0495638_0007909_5413_7080 548
64 3300048924 Ga0496121_0016871 Ga0496121_0016871_1361_3031 548
65 3300049527 Ga0501311_001538 Ga0501311_001538_52_1740 548
66 iso_pu_bacteria 2599185292 2599907722 548
67 iso_pu_bacteria 2643221569 2643859133 548
68 iso_pu_bacteria 2643221594 2643979826 548
69 iso_pu_bacteria 2643221621 2644123001 548
70 iso_pu_bacteria 2808606395 2809033748 548
71 iso_pu_bacteria 2857537821 2857542437 548
72 iso_pu_bacteria 2858950400 2858956351 548
73 iso_pu_bacteria 2941479691 2941484860 548
74 3300005518 Ga0070699_100152049 Ga0070699_1001520492 549
75 3300005545 Ga0070695_100029671 Ga0070695_1000296712 549
76 3300005549 Ga0070704_100022819 Ga0070704_1000228193 549
77 3300005617 Ga0068859_100004852 Ga0068859_10000485211 549
78 3300006880 Ga0075429_100001374 Ga0075429_10000137415 549
79 3300006931 Ga0097620_100004852 Ga0097620_10000485211 549
80 3300009147 Ga0114129_10016719 Ga0114129_100167197 549
81 3300045051 Ga0451576_0003580 Ga0451576_0003580_16916_18619 549
82 3300050507 nmdc:mga05p37_261_c1 nmdc:mga05p37_261_c1_5124_6827 549
83 3300050508 nmdc:mga09592_119_c1 nmdc:mga09592_119_c1_5399_7102 549
84 3300050510 nmdc:mga06r32_2251_c1 nmdc:mga06r32_2251_c1_3874_5577 549
85 3300050510 nmdc:mga06r32_234189_c1 nmdc:mga06r32_234189_c1_10_1713 549
86 iso_pu_bacteria 2596583598 2597029814 549
87 iso_pu_bacteria 2599185178 2599446802 549
88 iso_pu_bacteria 2885266251 2885267766 549
89 iso_pu_bacteria 2900577576 2900577592 549
90 iso_pu_bacteria 2928058823 2928061821 549
91 3300002773 JGI25152J39213_1004595 JGI25152J39213_10045954 550
92 3300037312 Ga0395899_0000044 Ga0395899_0000044_54929_56599 550
93 3300037418 Ga0395900_0000042 Ga0395900_0000042_49089_50759 550
94 3300037466 Ga0395898_0000080 Ga0395898_0000080_49089_50759 550
95 3300037471 Ga0395905_0000044 Ga0395905_0000044_192158_193828 550
96 3300038443 Ga0395901_0000027 Ga0395901_0000027_192124_193794 550
97 3300046501 Ga0495607_0000920 Ga0495607_0000920_15404_17128 550
98 3300049569 Ga0501032_0000001 Ga0501032_0000001_352522_354192 550
99 3300049570 Ga0501033_0000092 Ga0501033_0000092_30569_32239 550
100 3300049571 Ga0501034_0000036 Ga0501034_0000036_66917_68587 550
101 3300049572 Ga0501036_0000078 Ga0501036_0000078_10601_12271 550
102 3300049573 Ga0501037_0000017 Ga0501037_0000017_96713_98383 550
103 3300049574 Ga0501038_0000036 Ga0501038_0000036_90081_91751 550
104 3300049575 Ga0501039_0000011 Ga0501039_0000011_69366_71036 550
105 3300049579 Ga0501043_0000105 Ga0501043_0000105_8471_10141 550
106 3300049581 Ga0501047_0000740 Ga0501047_0000740_2239_3909 550
107 3300049585 Ga0501069_0005279 Ga0501069_0005279_3636_5306 550
108 3300049586 Ga0501070_0000215 Ga0501070_0000215_23765_25435 550
109 3300049586 Ga0501070_0000747 Ga0501070_0000747_5556_7226 550
110 3300049586 Ga0501070_0014406 Ga0501070_0014406_2114_3784 550
111 3300049742 Ga0501080_0000542 Ga0501080_0000542_960_2630 550
112 3300049822 Ga0501035_0000028 Ga0501035_0000028_67043_68713 550
113 3300049822 Ga0501035_0000374 Ga0501035_0000374_23582_25252 550
114 3300049822 Ga0501035_0002288 Ga0501035_0002288_1006_2676 550
115 3300049823 Ga0501044_0003331 Ga0501044_0003331_4991_6661 550
116 3300049823 Ga0501044_0004322 Ga0501044_0004322_3004_4674 550
117 3300049823 Ga0501044_0023991 Ga0501044_0023991_1520_3190 550
118 3300049824 Ga0501045_0065123 Ga0501045_0065123_359_2029 550
119 iso_pu_bacteria 2643221550 2643769954 550
120 3300003187 JGI25151J46595_10000077 JGI25151J46595_1000007730 551
121 3300005331 Ga0070670_100006242 Ga0070670_1000062428 551
122 3300005331 Ga0070670_100094290 Ga0070670_1000942902 551
123 3300005347 Ga0070668_100007050 Ga0070668_1000070503 551
124 3300005354 Ga0070675_100016218 Ga0070675_1000162184 551
125 3300005354 Ga0070675_100081781 Ga0070675_1000817812 551
126 3300005355 Ga0070671_100099678 Ga0070671_1000996782 551
127 3300005367 Ga0070667_100092209 Ga0070667_1000922092 551
128 3300005467 Ga0070706_100092220 Ga0070706_1000922202 551
129 3300005468 Ga0070707_100102784 Ga0070707_1001027843 551
130 3300005471 Ga0070698_100109268 Ga0070698_1001092682 551
131 3300005543 Ga0070672_100003234 Ga0070672_1000032349 551
132 3300005543 Ga0070672_100083592 Ga0070672_1000835922 551
133 3300005547 Ga0070693_100003443 Ga0070693_1000034438 551
134 3300005548 Ga0070665_100131133 Ga0070665_1001311332 551
135 3300005617 Ga0068859_100126935 Ga0068859_1001269351 551
136 3300005618 Ga0068864_100001812 Ga0068864_10000181213 551
137 3300005618 Ga0068864_100009515 Ga0068864_1000095154 551
138 3300005718 Ga0068866_10005447 Ga0068866_100054473 551
139 3300005719 Ga0068861_100011195 Ga0068861_1000111954 551
140 3300005842 Ga0068858_100024662 Ga0068858_1000246623 551
141 3300005843 Ga0068860_100005312 Ga0068860_1000053124 551
142 3300005843 Ga0068860_100041672 Ga0068860_1000416723 551
143 3300005844 Ga0068862_100050022 Ga0068862_1000500223 551
144 3300006237 Ga0097621_100035526 Ga0097621_1000355264 551
145 3300006358 Ga0068871_100158318 Ga0068871_1001583181 551
146 3300006852 Ga0075433_10069395 Ga0075433_100693953 551
147 3300006914 Ga0075436_100069000 Ga0075436_1000690002 551
148 3300006931 Ga0097620_100126927 Ga0097620_1001269271 551
149 3300009176 Ga0105242_10037781 Ga0105242_100377812 551
150 3300009177 Ga0105248_10308366 Ga0105248_103083661 551
151 3300013297 Ga0157378_10063281 Ga0157378_100632812 551
152 3300013308 Ga0157375_10022936 Ga0157375_100229365 551
153 3300013308 Ga0157375_10106193 Ga0157375_101061931 551
154 3300014325 Ga0163163_10006142 Ga0163163_100061422 551
155 3300014325 Ga0163163_10016590 Ga0163163_100165901 551
156 3300014969 Ga0157376_10003536 Ga0157376_100035369 551
157 3300025294 Ga0209025_1000003 Ga0209025_100000391 551
158 3300025297 Ga0209758_1000155 Ga0209758_100015567 551
159 3300025298 Ga0209050_1007825 Ga0209050_10078252 551
160 3300025901 Ga0207688_10044283 Ga0207688_100442832 551
161 3300025922 Ga0207646_10006617 Ga0207646_100066176 551
162 3300025925 Ga0207650_10004260 Ga0207650_100042607 551
163 3300025925 Ga0207650_10019328 Ga0207650_100193282 551
164 3300025926 Ga0207659_10016733 Ga0207659_100167332 551
165 3300025933 Ga0207706_10067031 Ga0207706_100670312 551
166 3300025934 Ga0207686_10015950 Ga0207686_100159503 551
167 3300025939 Ga0207665_10074868 Ga0207665_100748682 551
168 3300025940 Ga0207691_10002303 Ga0207691_100023039 551
169 3300025940 Ga0207691_10004067 Ga0207691_1000406712 551
170 3300025940 Ga0207691_10006730 Ga0207691_100067309 551
171 3300025942 Ga0207689_10007557 Ga0207689_100075576 551
172 3300025972 Ga0207668_10016090 Ga0207668_100160904 551
173 3300025972 Ga0207668_10022282 Ga0207668_100222821 551
174 3300026035 Ga0207703_10080179 Ga0207703_100801792 551
175 3300026088 Ga0207641_10008422 Ga0207641_100084225 551
176 3300026089 Ga0207648_10096790 Ga0207648_100967902 551
177 3300026095 Ga0207676_10004319 Ga0207676_100043199 551
178 3300026116 Ga0207674_10018408 Ga0207674_100184087 551
179 3300026118 Ga0207675_100022495 Ga0207675_1000224954 551
180 3300026121 Ga0207683_10008597 Ga0207683_100085975 551
181 3300028379 Ga0268266_10133893 Ga0268266_101338932 551
182 3300028380 Ga0268265_10086609 Ga0268265_100866092 551
183 3300028381 Ga0268264_10034405 Ga0268264_100344054 551
184 3300031235 Ga0265330_10012609 Ga0265330_100126093 551
185 3300031238 Ga0265332_10002629 Ga0265332_100026293 551
186 3300031239 Ga0265328_10036098 Ga0265328_100360982 551
187 3300031250 Ga0265331_10003290 Ga0265331_100032908 551
188 3300036401 Ga0373937_0011057 Ga0373937_0011057_2526_4202 551
189 3300036401 Ga0373937_0073098 Ga0373937_0073098_322_1980 551
190 3300039447 Ga0436361_0270077 Ga0436361_0270077_5336_6994 551
191 3300044683 Ga0466965_0007541 Ga0466965_0007541_2239_3897 551
192 3300044693 Ga0466961_0006267 Ga0466961_0006267_3146_4804 551
193 3300045049 Ga0466959_0002077 Ga0466959_0002077_813_2471 551
194 3300046454 Ga0495592_0007576 Ga0495592_0007576_6367_8055 551
195 3300046543 Ga0495645_0003648 Ga0495645_0003648_7494_9182 551
196 3300046559 Ga0495667_0037396 Ga0495667_0037396_1129_2817 551
197 3300046663 Ga0495635_0047238 Ga0495635_0047238_1226_2914 551
198 3300046675 Ga0495657_0045166 Ga0495657_0045166_702_2390 551
199 3300048919 Ga0496116_0015024 Ga0496116_0015024_1306_3012 551
200 3300048924 Ga0496121_0012940 Ga0496121_0012940_2582_4315 551
201 3300049588 Ga0501072_0099530 Ga0501072_0099530_34_1752 551
202 3300049591 Ga0501075_0127834 Ga0501075_0127834_183_1901 551
203 3300049822 Ga0501035_0003206 Ga0501035_0003206_296_2029 551
204 3300049823 Ga0501044_0014562 Ga0501044_0014562_3994_5727 551
205 3300053153 Ga0500616_0001898 Ga0500616_0001898_2294_3967 551
206 3300005547 Ga0070693_100016260 Ga0070693_1000162602 552
207 3300005614 Ga0068856_100111837 Ga0068856_1001118372 552
208 3300006051 Ga0075364_10000328 Ga0075364_1000032811 552
209 3300006051 Ga0075364_10017205 Ga0075364_100172053 552
210 3300009093 Ga0105240_10156530 Ga0105240_101565302 552
211 3300009176 Ga0105242_10014642 Ga0105242_100146423 552
212 3300013105 Ga0157369_10000908 Ga0157369_1000090836 552
213 3300025298 Ga0209050_1005371 Ga0209050_10053713 552
214 3300025913 Ga0207695_10011976 Ga0207695_100119768 552
215 3300025913 Ga0207695_10167117 Ga0207695_101671172 552
216 3300026142 Ga0207698_10096679 Ga0207698_100966793 552
217 3300031507 Ga0307509_10000053 Ga0307509_1000005372 552
218 3300031911 Ga0307412_10000078 Ga0307412_1000007886 552
219 3300046522 Ga0495643_0010247 Ga0495643_0010247_1952_3646 552
220 3300047318 Ga0495636_0037015 Ga0495636_0037015_233_1963 552
221 3300048921 Ga0496118_0067611 Ga0496118_0067611_372_2114 552
222 3300048922 Ga0496119_0042945 Ga0496119_0042945_349_2091 552
223 3300048923 Ga0496120_0015759 Ga0496120_0015759_535_2277 552
224 3300048924 Ga0496121_0000153 Ga0496121_0000153_88420_90162 552
225 3300048925 Ga0496122_0000186 Ga0496122_0000186_33065_34807 552
226 3300048926 Ga0496123_0000162 Ga0496123_0000162_117536_119278 552
227 3300048927 Ga0496124_0000007 Ga0496124_0000007_856548_858293 552
228 3300048927 Ga0496124_0109904 Ga0496124_0109904_339_2081 552
229 3300048928 Ga0496125_0000023 Ga0496125_0000023_116511_118253 552
230 3300048928 Ga0496125_0027034 Ga0496125_0027034_2418_4160 552
231 3300049571 Ga0501034_0050836 Ga0501034_0050836_774_2501 552
232 3300050491 nmdc:mga00v17_4707_c1 nmdc:mga00v17_4707_c1_1062_2798 552
233 3300050491 nmdc:mga00v17_56551_c1 nmdc:mga00v17_56551_c1_327_2063 552
234 iso_pu_bacteria 2857542790 2857544535 552
235 3300001915 JGI24741J21665_1001077 JGI24741J21665_10010776 553
236 3300001979 JGI24740J21852_10000051 JGI24740J21852_1000005135 553
237 3300001979 JGI24740J21852_10000400 JGI24740J21852_100004007 553
238 3300002705 JGI25156J39149_1009307 JGI25156J39149_10093072 553
239 3300002738 JGI25154J39366_1000429 JGI25154J39366_10004294 553
240 3300003479 Ga0006556J51387_1026861 Ga0006556J51387_10268612 553
241 3300003752 Ga0055539_1000321 Ga0055539_10003214 553
242 3300003756 Ga0055533_1000879 Ga0055533_10008794 553
243 3300003758 Ga0055532_1000008 Ga0055532_100000888 553
244 3300003759 Ga0055525_1000169 Ga0055525_100016968 553
245 3300003760 Ga0055527_1000510 Ga0055527_10005103 553
246 3300003761 Ga0055535_1000006 Ga0055535_1000006304 553
247 3300003762 Ga0055542_1000956 Ga0055542_100095614 553
248 3300003763 Ga0055529_1000030 Ga0055529_1000030187 553
249 3300003841 Ga0055541_1001126 Ga0055541_10011264 553
250 3300005344 Ga0070661_100000002 Ga0070661_100000002108 553
251 3300005366 Ga0070659_100000608 Ga0070659_1000006089 553
252 3300005455 Ga0070663_100000007 Ga0070663_100000007139 553
253 3300005564 Ga0070664_100000001 Ga0070664_100000001250 553
254 3300005578 Ga0068854_100000185 Ga0068854_10000018530 553
255 3300005614 Ga0068856_100000007 Ga0068856_100000007213 553
256 3300013100 Ga0157373_10121759 Ga0157373_101217592 553
257 3300013102 Ga0157371_10000035 Ga0157371_10000035181 553
258 3300013104 Ga0157370_10000161 Ga0157370_1000016169 553
259 3300013105 Ga0157369_10007348 Ga0157369_1000734812 553
260 3300013307 Ga0157372_10000522 Ga0157372_1000052223 553
261 3300015261 Ga0182006_1003037 Ga0182006_10030374 553
262 3300020076 Ga0206355_1624367 Ga0206355_16243674 553
263 3300020077 Ga0206351_10600043 Ga0206351_106000435 553
264 3300020610 Ga0154015_1157012 Ga0154015_11570124 553
265 3300025224 Ga0209784_100014 Ga0209784_100014188 553
266 3300025224 Ga0209784_100269 Ga0209784_10026925 553
267 3300025225 Ga0209566_100011 Ga0209566_100011188 553
268 3300025225 Ga0209566_100591 Ga0209566_1005914 553
269 3300025226 Ga0209674_100032 Ga0209674_100032297 553
270 3300025226 Ga0209674_100304 Ga0209674_10030414 553
271 3300025228 Ga0209672_100094 Ga0209672_10009467 553
272 3300025229 Ga0209147_100002 Ga0209147_100002427 553
273 3300025230 Ga0209563_100029 Ga0209563_100029297 553
274 3300025242 Ga0209258_100002 Ga0209258_100002427 553
275 3300025246 Ga0209646_1000035 Ga0209646_1000035285 553
276 3300025253 Ga0209677_100081 Ga0209677_10008125 553
277 3300025253 Ga0209677_105525 Ga0209677_1055252 553
278 3300025254 Ga0209148_1000158 Ga0209148_100015820 553
279 3300025256 Ga0209759_1001953 Ga0209759_10019534 553
280 3300025272 Ga0209455_1000009 Ga0209455_1000009306 553
281 3300025913 Ga0207695_10016851 Ga0207695_100168517 553
282 3300025920 Ga0207649_10001577 Ga0207649_100015778 553
283 3300025932 Ga0207690_10003122 Ga0207690_100031223 553
284 3300025945 Ga0207679_10000003 Ga0207679_10000003273 553
285 3300025981 Ga0207640_10000083 Ga0207640_1000008344 553
286 3300026067 Ga0207678_10000002 Ga0207678_10000002141 553
287 3300026116 Ga0207674_10008421 Ga0207674_100084217 553
288 3300037418 Ga0395900_0015924 Ga0395900_0015924_4025_5686 553

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01077

NIR_SIR

Nitrite and sulphite reductase 4Fe-4S domain

126

281

0.98

PF03460

NIR_SIR_ferr

Nitrite/Sulfite reductase ferredoxin-like half domain

53

118

0.94

PF03460

NIR_SIR_ferr

Nitrite/Sulfite reductase ferredoxin-like half domain

334

406

0.92

PF01077

NIR_SIR

Nitrite and sulphite reductase 4Fe-4S domain

414

578

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
6c3z-assembly1.cif.gz_A t477a sirhp 0.8174 54 537
6c3x-assembly1.cif.gz_A wild type structure of sirhp 0.8144 54 540
1zj9-assembly2.cif.gz_B structure of mycobacterium tuberculosis nira protein 0.8123 31 543
5gep-assembly1.cif.gz_A sulfite reductase hemoprotein carbon monoxide complex reduced with crii edta 0.8123 54 537
6c3y-assembly1.cif.gz_A wild type structure of sirhp 0.8121 54 540
ID Description Score Start End Superfamily
af_Q60EA3_125_197_3.90.480.10 Alpha Beta;Alpha-Beta Complex;Sulfite Reductase Hemoprotein; domain 2;Sulfite Reductase Hemoprotein;Domain 2 0.8974 50 120 3.90.480.10
af_Q2FVL8_631_763_3.30.413.10 Alpha Beta;2-Layer Sandwich;Sulfite Reductase Hemoprotein; domain 1;Sulfite Reductase Hemoprotein, domain 1 0.8785 414 552 3.30.413.10
af_Q2FVL8_530_630_3.90.480.10 Alpha Beta;Alpha-Beta Complex;Sulfite Reductase Hemoprotein; domain 2;Sulfite Reductase Hemoprotein;Domain 2 0.8711 45 109 3.90.480.10
af_P17846_72_140_3.90.480.10 Alpha Beta;Alpha-Beta Complex;Sulfite Reductase Hemoprotein; domain 2;Sulfite Reductase Hemoprotein;Domain 2 0.8698 46 111 3.90.480.10
af_Q1K9C2_887_1062_3.90.480.20 Alpha Beta;Alpha-Beta Complex;Sulfite Reductase Hemoprotein; domain 2; 0.8679 39 127 3.90.480.20
ID Description Score Start End GO Terms
AF-A0A3M1J539-F1-model_v4 Nitrite/sulfite reductase 0.9948 1 113 GO:0016491
AF-A0A6P1B1K6-F1-model_v4 deleted 0.9919 471 548
AF-A0A3M1J539-F1-model_v4 Nitrite/sulfite reductase 0.9861 1 113 GO:0016491
AF-A0A0K9I507-F1-model_v4 deleted 0.9861 294 507
AF-A0A367M2J0-F1-model_v4 Nitrite/sulfite reductase 0.9848 1 106 GO:0016491

Feature Viewer

pLDDT pTM Quality
87.35 0.89 High
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Predicted Structure (AlphaFold2)

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