F381949

General Info

Members Datasets Scaffolds Average Seq Length
277 176 554 214

Family's Representative Sequence

Representative Sequence 3300045836|Ga0466958_0028909|Ga0466958_0028909_1711_2451
Length 246
Sequence MPSARRPAGRKAPKLGGGTINLDSDAFEARFNMPLVHESVRAELAARRRGTASTKTRGQVRGGGEKPWRQKGTGRARAGSNRSPIWTGGGTVFGPSPRHYTFKINRKERRAALRSALSLHAERESLAVFDAGVFDAPSTAQAVGLLNDWDPTEPVLVVLGNDEAAAGKSFRNIKRTDAIPVGDVGVADIVGAASLLISEAALPALVERAQKPTRSSHDAPNSGLSSERAAPTPKAGVATSATEEAA

Samples

Sample ID Description Type Environment
1 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
20 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
21 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
22 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
25 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
26 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
29 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
30 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
37 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
38 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
39 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
40 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
41 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
42 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
43 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
44 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
47 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
48 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
51 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
52 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
53 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
54 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
55 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
56 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
57 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
58 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
59 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
60 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
61 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
62 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
104 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
105 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
106 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
107 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
108 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
109 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
110 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
111 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
112 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
113 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
114 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
115 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
116 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
117 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
118 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
119 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
120 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
121 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
122 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
123 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
124 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
125 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
126 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
127 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
128 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
129 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
130 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
131 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
132 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
133 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
134 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
135 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
136 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
137 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
138 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
139 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
140 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
141 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
142 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
143 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
144 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
145 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
146 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
147 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
148 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
149 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
150 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
151 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
152 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
153 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
154 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
155 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
156 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
157 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
158 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
159 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
160 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
161 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
162 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
163 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
164 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
165 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
166 3300049533 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
167 3300049537 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B12_A_3_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
168 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
169 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
170 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
171 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
172 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
173 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
174 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
175 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
176 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.92
Metatranscriptomes 1.08
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.08
Nodule 0
Rhizoplane 6.5
Rhizosphere 82.67
Stem 0
Stem Tuber 0
Unclassified 0.72

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466958_0028909 3300045836 Bacteria 3289
2 Ga0070676_10340221 3300005328 Bacteria 1029
3 Ga0070683_100560339 3300005329 Bacteria 1093
4 Ga0070682_100209720 3300005337 Bacteria 1380
5 Ga0070682_100485695 3300005337 Bacteria 954
6 Ga0068868_100132660 3300005338 Bacteria 2039
7 Ga0070689_100146074 3300005340 Bacteria 1905
8 Ga0070661_100326876 3300005344 Bacteria 1199
9 Ga0070668_101080253 3300005347 Bacteria 724
10 Ga0070675_100657277 3300005354 Bacteria 953
11 Ga0070671_100203558 3300005355 Bacteria 1679
12 Ga0070674_100129035 3300005356 Bacteria 1882
13 Ga0070688_100419054 3300005365 Bacteria 995
14 Ga0070659_100591732 3300005366 Bacteria 953
15 Ga0070709_10025460 3300005434 Bacteria 3496
16 Ga0070714_100096656 3300005435 Bacteria 2595
17 Ga0070714_100247672 3300005435 Bacteria 1647
18 Ga0070713_100061554 3300005436 Bacteria 3140
19 Ga0070711_100010618 3300005439 Bacteria 5705
20 Ga0070700_100084563 3300005441 Bacteria 2056
21 Ga0070663_100595020 3300005455 Bacteria 929
22 Ga0070678_100421481 3300005456 Bacteria 1164
23 Ga0070662_100130102 3300005457 Bacteria 1940
24 Ga0070681_10598734 3300005458 Bacteria 1017
25 Ga0068867_100583441 3300005459 Bacteria 973
26 Ga0070685_10279189 3300005466 Bacteria 1118
27 Ga0070707_100121433 3300005468 Bacteria 2537
28 Ga0070699_100588734 3300005518 Bacteria 1014
29 Ga0070679_100468830 3300005530 Bacteria 1204
30 Ga0070684_101078252 3300005535 Bacteria 755
31 Ga0070672_100366951 3300005543 Bacteria 1230
32 Ga0070672_100875388 3300005543 Bacteria 793
33 Ga0070664_100242696 3300005564 Bacteria 1617
34 Ga0070664_100747758 3300005564 Bacteria 912
35 Ga0068857_100672150 3300005577 Bacteria 983
36 Ga0070702_100005631 3300005615 Bacteria 5858
37 Ga0068852_100227666 3300005616 Bacteria 1776
38 Ga0068859_100119417 3300005617 Bacteria 2703
39 Ga0068864_100096261 3300005618 Bacteria 2619
40 Ga0068866_10057880 3300005718 Bacteria 1999
41 Ga0068870_10062303 3300005840 Bacteria 2008
42 Ga0068863_100979685 3300005841 Bacteria 848
43 Ga0068858_100115450 3300005842 Bacteria 2509
44 Ga0068860_100550246 3300005843 Bacteria 1156
45 Ga0068862_100555649 3300005844 Bacteria 1097
46 Ga0070717_10080499 3300006028 Bacteria 2733
47 Ga0070717_10106216 3300006028 Bacteria 2390
48 Ga0070717_10180166 3300006028 Bacteria 1841
49 Ga0070712_100124401 3300006175 Bacteria 1945
50 Ga0070712_100525074 3300006175 Unclassified 995
51 Ga0075430_100243650 3300006846 Bacteria 1490
52 Ga0097620_100119408 3300006931 Bacteria 2703
53 Ga0105245_10091016 3300009098 Bacteria 2807
54 Ga0105245_10207575 3300009098 Bacteria 1884
55 Ga0105245_10352825 3300009098 Bacteria 1458
56 Ga0105243_10085476 3300009148 Bacteria 2586
57 Ga0105243_10576725 3300009148 Bacteria 1079
58 Ga0105241_10963496 3300009174 Bacteria 796
59 Ga0105241_11146981 3300009174 Bacteria 734
60 Ga0105248_10361030 3300009177 Bacteria 1635
61 Ga0163162_10421942 3300013306 Bacteria 1466
62 Ga0157375_11407831 3300013308 Bacteria 821
63 Ga0163163_10179775 3300014325 Bacteria 2163
64 Ga0163163_11261586 3300014325 Bacteria 801
65 Ga0157380_10695198 3300014326 Bacteria 1021
66 Ga0157377_10264828 3300014745 Bacteria 1120
67 Ga0157379_10290217 3300014968 Bacteria 1490
68 Ga0163161_10699792 3300017792 Bacteria 844
69 Ga0206356_11550861 3300020070 Bacteria 848
70 Ga0213874_10002514 3300021377 Bacteria 3955
71 Ga0213874_10008711 3300021377 Bacteria 2482
72 Ga0213876_10014495 3300021384 Bacteria 4176
73 Ga0213876_10193898 3300021384 Bacteria 1080
74 Ga0213876_10290746 3300021384 Bacteria 868
75 Ga0213875_10013547 3300021388 Bacteria 4000
76 Ga0213875_10020518 3300021388 Bacteria 3170
77 Ga0213875_10031658 3300021388 Bacteria 2501
78 Ga0207426_1027930 3300025302 Bacteria 1874
79 Ga0207692_10000003 3300025898 Bacteria 431531
80 Ga0207688_10029091 3300025901 Bacteria 3040
81 Ga0207688_10079443 3300025901 Bacteria 1871
82 Ga0207699_10025558 3300025906 Bacteria 3243
83 Ga0207643_10134240 3300025908 Bacteria 1474
84 Ga0207643_10284124 3300025908 Bacteria 1027
85 Ga0207707_10463746 3300025912 Bacteria 1083
86 Ga0207693_10013907 3300025915 Bacteria 6480
87 Ga0207693_10065988 3300025915 Bacteria 2834
88 Ga0207663_10005867 3300025916 Bacteria 6228
89 Ga0207663_10272101 3300025916 Bacteria 1255
90 Ga0207663_10508642 3300025916 Bacteria 936
91 Ga0207662_10155303 3300025918 Bacteria 1458
92 Ga0207657_10060594 3300025919 Bacteria 3247
93 Ga0207657_10139400 3300025919 Bacteria 1982
94 Ga0207657_10293685 3300025919 Bacteria 1288
95 Ga0207649_10355513 3300025920 Bacteria 1085
96 Ga0207652_10064741 3300025921 Bacteria 3164
97 Ga0207646_10177643 3300025922 Bacteria 1923
98 Ga0207646_10346148 3300025922 Bacteria 1343
99 Ga0207681_10306243 3300025923 Bacteria 1259
100 Ga0207659_10464890 3300025926 Bacteria 1067
101 Ga0207687_10030470 3300025927 Bacteria 3638
102 Ga0207664_10052775 3300025929 Bacteria 3216
103 Ga0207664_10377814 3300025929 Bacteria 1257
104 Ga0207664_10514803 3300025929 Bacteria 1072
105 Ga0207690_10209402 3300025932 Bacteria 1486
106 Ga0207690_10247389 3300025932 Bacteria 1376
107 Ga0207706_10040115 3300025933 Bacteria 4149
108 Ga0207706_10336887 3300025933 Bacteria 1312
109 Ga0207709_10481160 3300025935 Bacteria 965
110 Ga0207709_10512501 3300025935 Bacteria 938
111 Ga0207709_10898392 3300025935 Bacteria 720
112 Ga0207669_10295844 3300025937 Bacteria 1228
113 Ga0207669_10613361 3300025937 Bacteria 886
114 Ga0207704_10051212 3300025938 Bacteria 2495
115 Ga0207704_10128816 3300025938 Bacteria 1748
116 Ga0207704_10211440 3300025938 Bacteria 1428
117 Ga0207665_10099952 3300025939 Bacteria 2024
118 Ga0207665_10273666 3300025939 Bacteria 1255
119 Ga0207691_10479667 3300025940 Bacteria 1057
120 Ga0207689_10091239 3300025942 Bacteria 2503
121 Ga0207689_10140831 3300025942 Bacteria 1987
122 Ga0207661_10167922 3300025944 Bacteria 1908
123 Ga0207679_10031597 3300025945 Bacteria 3707
124 Ga0207679_10108799 3300025945 Bacteria 2183
125 Ga0207679_10749594 3300025945 Bacteria 888
126 Ga0207667_10742188 3300025949 Bacteria 981
127 Ga0207668_10177784 3300025972 Bacteria 1676
128 Ga0207640_10059615 3300025981 Bacteria 2519
129 Ga0207677_10205508 3300026023 Bacteria 1569
130 Ga0207677_10227396 3300026023 Bacteria 1500
131 Ga0207703_10065761 3300026035 Bacteria 2980
132 Ga0207678_10168023 3300026067 Bacteria 1873
133 Ga0207678_10415995 3300026067 Bacteria 1165
134 Ga0207708_10081503 3300026075 Bacteria 2487
135 Ga0207708_10087705 3300026075 Bacteria 2396
136 Ga0207641_10585828 3300026088 Bacteria 1091
137 Ga0207648_10086990 3300026089 Bacteria 2727
138 Ga0207648_10098546 3300026089 Bacteria 2559
139 Ga0207676_10054566 3300026095 Bacteria 3133
140 Ga0207674_10690391 3300026116 Bacteria 985
141 Ga0207674_10700635 3300026116 Bacteria 978
142 Ga0207675_100246022 3300026118 Bacteria 1729
143 Ga0207675_100257516 3300026118 Bacteria 1690
144 Ga0207683_10117278 3300026121 Bacteria 2387
145 Ga0207683_10763041 3300026121 Bacteria 897
146 Ga0207698_10283630 3300026142 Bacteria 1533
147 Ga0207698_10575256 3300026142 Bacteria 1107
148 Ga0268265_10877016 3300028380 Bacteria 880
149 Ga0268265_11224194 3300028380 Bacteria 749
150 Ga0265337_1023137 3300028556 Bacteria 1915
151 Ga0265326_10000931 3300028558 Bacteria 10545
152 Ga0265319_1000863 3300028563 Bacteria 19261
153 Ga0265319_1105065 3300028563 Bacteria 885
154 Ga0265318_10000275 3300028577 Bacteria 43186
155 Ga0265323_10084300 3300028653 Bacteria 1070
156 Ga0265336_10000043 3300028666 Bacteria 132135
157 Ga0265338_10000142 3300028800 Bacteria 132135
158 Ga0265324_10056337 3300029957 Bacteria 1347
159 Ga0265340_10000006 3300031247 Bacteria 132135
160 Ga0265327_10036385 3300031251 Bacteria 2706
161 Ga0265327_10073127 3300031251 Bacteria 1711
162 Ga0265327_10156696 3300031251 Bacteria 1055
163 Ga0265327_10199116 3300031251 Bacteria 908
164 Ga0265316_10010215 3300031344 Bacteria 8571
165 Ga0265342_10115263 3300031712 Bacteria 1517
166 Ga0307405_10096705 3300031731 Bacteria 1970
167 Ga0307406_10166733 3300031901 Bacteria 1590
168 Ga0307407_10172862 3300031903 Bacteria 1425
169 Ga0307407_10770854 3300031903 Bacteria 730
170 Ga0307412_10776151 3300031911 Bacteria 830
171 Ga0307409_101659302 3300031995 Bacteria 668
172 Ga0307416_100548224 3300032002 Bacteria 1229
173 Ga0307414_10507784 3300032004 Bacteria 1068
174 Ga0307415_100740167 3300032126 Bacteria 891
175 Ga0373943_0082786 3300035170 Bacteria 1648
176 Ga0395900_0648798 3300037418 Bacteria 992
177 Ga0395898_0004042 3300037466 Bacteria 16132
178 Ga0395898_0029242 3300037466 Bacteria 5521
179 Ga0395898_0980642 3300037466 Bacteria 781
180 Ga0436364_0012596 3300037853 Bacteria 3992
181 Ga0436364_0101374 3300037853 Bacteria 3222
182 Ga0436364_0362343 3300037853 Bacteria 5501
183 Ga0436364_0474529 3300037853 Bacteria 2985
184 Ga0436364_0727760 3300037853 Bacteria 5997
185 Ga0436364_0781728 3300037853 Bacteria 941
186 Ga0436364_0804559 3300037853 Bacteria 2805
187 Ga0436364_1282248 3300037853 Bacteria 1251
188 Ga0395901_0037835 3300038443 Bacteria 4989
189 Ga0395901_0248922 3300038443 Bacteria 1852
190 Ga0436365_0889615 3300039437 Bacteria 1330
191 Ga0436365_1414304 3300039437 Bacteria 1410
192 Ga0436365_1598222 3300039437 Bacteria 3080
193 Ga0436365_1720692 3300039437 Bacteria 2084
194 Ga0436365_1904562 3300039437 Bacteria 2014
195 Ga0436365_1934402 3300039437 Bacteria 2562
196 Ga0436363_0256943 3300039450 Bacteria 1671
197 Ga0436363_0793862 3300039450 Bacteria 10158
198 Ga0436363_1000975 3300039450 Bacteria 1458
199 Ga0436362_0971514 3300039453 Bacteria 1714
200 Ga0439463_011539 3300042016 Bacteria 2169
201 Ga0466969_0041808 3300044656 Bacteria 2291
202 Ga0466969_0058175 3300044656 Bacteria 1882
203 Ga0466965_0103023 3300044683 Bacteria 1461
204 Ga0466966_0087705 3300044684 Bacteria 1934
205 Ga0466966_0247169 3300044684 Bacteria 1075
206 Ga0466966_0259260 3300044684 Bacteria 1047
207 Ga0466961_0023348 3300044693 Bacteria 3979
208 Ga0466961_0032273 3300044693 Bacteria 3364
209 Ga0466961_0119374 3300044693 Bacteria 1656
210 Ga0466961_0180008 3300044693 Bacteria 1313
211 Ga0466961_0243684 3300044693 Bacteria 1105
212 Ga0466961_0469499 3300044693 Bacteria 761
213 Ga0466963_0001026 3300044694 Bacteria 14486
214 Ga0466963_0128014 3300044694 Bacteria 1752
215 Ga0453684_0534074 3300044712 Bacteria 1294
216 Ga0466971_0050998 3300044719 Bacteria 1862
217 Ga0466971_0241517 3300044719 Bacteria 859
218 Ga0466968_0161627 3300044735 Unclassified 1034
219 Ga0466970_0053794 3300044765 Bacteria 2150
220 Ga0466970_0265577 3300044765 Bacteria 963
221 Ga0466960_0001761 3300044901 Bacteria 7943
222 Ga0466960_0109936 3300044901 Bacteria 1431
223 Ga0466959_0039917 3300045049 Bacteria 3469
224 Ga0466959_0159366 3300045049 Bacteria 1587
225 Ga0466959_0230590 3300045049 Bacteria 1282
226 Ga0466959_0258356 3300045049 Bacteria 1199
227 Ga0466959_0366151 3300045049 Bacteria 982
228 Ga0466958_0008187 3300045836 Bacteria 5789
229 Ga0466958_0023806 3300045836 Bacteria 3599
230 Ga0466958_0059014 3300045836 Bacteria 2333
231 Ga0466958_0059538 3300045836 Bacteria 2323
232 Ga0466958_0146010 3300045836 Bacteria 1491
233 Ga0466967_0041134 3300045976 Bacteria 3982
234 Ga0466967_0096012 3300045976 Bacteria 2703
235 Ga0466967_0234485 3300045976 Bacteria 1748
236 Ga0466967_0594156 3300045976 Bacteria 1092
237 Ga0495653_0004713 3300046463 Bacteria 11039
238 Ga0495618_0000035 3300046514 Bacteria 102739
239 Ga0495630_0000610 3300046517 Bacteria 25880
240 Ga0495645_0000033 3300046543 Bacteria 105930
241 Ga0495656_0201921 3300046615 Bacteria 987
242 Ga0495668_0325681 3300046616 Bacteria 843
243 Ga0495588_0061152 3300046674 Bacteria 1950
244 Ga0495657_0000027 3300046675 Bacteria 131421
245 Ga0495658_0355178 3300046683 Bacteria 932
246 Ga0495604_0293188 3300047317 Bacteria 1095
247 Ga0496102_0143115 3300048905 Bacteria 2243
248 Ga0496102_0335175 3300048905 Bacteria 1425
249 Ga0496102_0581070 3300048905 Bacteria 1043
250 Ga0496103_0399688 3300048906 Bacteria 883
251 Ga0496106_0069042 3300048909 Bacteria 2696
252 Ga0496107_0049671 3300048910 Bacteria 3023
253 Ga0496108_0295104 3300048911 Bacteria 1412
254 Ga0496109_0004801 3300048912 Bacteria 11284
255 Ga0496109_0119789 3300048912 Bacteria 2451
256 Ga0496109_0229745 3300048912 Bacteria 1745
257 Ga0496111_0117258 3300048914 Bacteria 1964
258 Ga0496111_0458085 3300048914 Bacteria 941
259 Ga0496112_0005170 3300048915 Bacteria 11216
260 Ga0496112_0420540 3300048915 Bacteria 1275
261 Ga0496112_0781175 3300048915 Bacteria 880
262 Ga0496114_0040613 3300048917 Bacteria 3852
263 Ga0496115_0021403 3300048918 Bacteria 4997
264 Ga0496115_0428549 3300048918 Bacteria 1071
265 Ga0496119_0207546 3300048922 Bacteria 1010
266 Ga0496121_0366358 3300048924 Bacteria 955
267 Ga0501317_026362 3300049533 Bacteria 819
268 Ga0501321_027592 3300049537 Bacteria 742
269 Ga0501034_0185517 3300049571 Bacteria 2044
270 Ga0501069_0038355 3300049585 Bacteria 2645
271 Ga0501079_0119065 3300049741 Bacteria 2053
272 nmdc:mga0qj67_79691_c1 3300050509 Bacteria 2623
273 Ga0495601_0003409 3300053077 Bacteria 9110
274 Ga0495612_0000369 3300053078 Bacteria 18070
275 Ga0500616_0006301 3300053153 Bacteria 7797
276 Ga0500622_0005115 3300053156 Bacteria 7960
277 Ga0466962_0045117 3300061719 Bacteria 2107
278 Ga0466958_0028909
279 Ga0070676_10340221
280 Ga0070683_100560339
281 Ga0070682_100209720
282 Ga0070682_100485695
283 Ga0068868_100132660
284 Ga0070689_100146074
285 Ga0070661_100326876
286 Ga0070668_101080253
287 Ga0070675_100657277
288 Ga0070671_100203558
289 Ga0070674_100129035
290 Ga0070688_100419054
291 Ga0070659_100591732
292 Ga0070709_10025460
293 Ga0070714_100096656
294 Ga0070714_100247672
295 Ga0070713_100061554
296 Ga0070711_100010618
297 Ga0070700_100084563
298 Ga0070663_100595020
299 Ga0070678_100421481
300 Ga0070662_100130102
301 Ga0070681_10598734
302 Ga0068867_100583441
303 Ga0070685_10279189
304 Ga0070707_100121433
305 Ga0070699_100588734
306 Ga0070679_100468830
307 Ga0070684_101078252
308 Ga0070672_100366951
309 Ga0070672_100875388
310 Ga0070664_100242696
311 Ga0070664_100747758
312 Ga0068857_100672150
313 Ga0070702_100005631
314 Ga0068852_100227666
315 Ga0068859_100119417
316 Ga0068864_100096261
317 Ga0068866_10057880
318 Ga0068870_10062303
319 Ga0068863_100979685
320 Ga0068858_100115450
321 Ga0068860_100550246
322 Ga0068862_100555649
323 Ga0070717_10080499
324 Ga0070717_10106216
325 Ga0070717_10180166
326 Ga0070712_100124401
327 Ga0070712_100525074
328 Ga0075430_100243650
329 Ga0097620_100119408
330 Ga0105245_10091016
331 Ga0105245_10207575
332 Ga0105245_10352825
333 Ga0105243_10085476
334 Ga0105243_10576725
335 Ga0105241_10963496
336 Ga0105241_11146981
337 Ga0105248_10361030
338 Ga0163162_10421942
339 Ga0157375_11407831
340 Ga0163163_10179775
341 Ga0163163_11261586
342 Ga0157380_10695198
343 Ga0157377_10264828
344 Ga0157379_10290217
345 Ga0163161_10699792
346 Ga0206356_11550861
347 Ga0213874_10002514
348 Ga0213874_10008711
349 Ga0213876_10014495
350 Ga0213876_10193898
351 Ga0213876_10290746
352 Ga0213875_10013547
353 Ga0213875_10020518
354 Ga0213875_10031658
355 Ga0207426_1027930
356 Ga0207692_10000003
357 Ga0207688_10029091
358 Ga0207688_10079443
359 Ga0207699_10025558
360 Ga0207643_10134240
361 Ga0207643_10284124
362 Ga0207707_10463746
363 Ga0207693_10013907
364 Ga0207693_10065988
365 Ga0207663_10005867
366 Ga0207663_10272101
367 Ga0207663_10508642
368 Ga0207662_10155303
369 Ga0207657_10060594
370 Ga0207657_10139400
371 Ga0207657_10293685
372 Ga0207649_10355513
373 Ga0207652_10064741
374 Ga0207646_10177643
375 Ga0207646_10346148
376 Ga0207681_10306243
377 Ga0207659_10464890
378 Ga0207687_10030470
379 Ga0207664_10052775
380 Ga0207664_10377814
381 Ga0207664_10514803
382 Ga0207690_10209402
383 Ga0207690_10247389
384 Ga0207706_10040115
385 Ga0207706_10336887
386 Ga0207709_10481160
387 Ga0207709_10512501
388 Ga0207709_10898392
389 Ga0207669_10295844
390 Ga0207669_10613361
391 Ga0207704_10051212
392 Ga0207704_10128816
393 Ga0207704_10211440
394 Ga0207665_10099952
395 Ga0207665_10273666
396 Ga0207691_10479667
397 Ga0207689_10091239
398 Ga0207689_10140831
399 Ga0207661_10167922
400 Ga0207679_10031597
401 Ga0207679_10108799
402 Ga0207679_10749594
403 Ga0207667_10742188
404 Ga0207668_10177784
405 Ga0207640_10059615
406 Ga0207677_10205508
407 Ga0207677_10227396
408 Ga0207703_10065761
409 Ga0207678_10168023
410 Ga0207678_10415995
411 Ga0207708_10081503
412 Ga0207708_10087705
413 Ga0207641_10585828
414 Ga0207648_10086990
415 Ga0207648_10098546
416 Ga0207676_10054566
417 Ga0207674_10690391
418 Ga0207674_10700635
419 Ga0207675_100246022
420 Ga0207675_100257516
421 Ga0207683_10117278
422 Ga0207683_10763041
423 Ga0207698_10283630
424 Ga0207698_10575256
425 Ga0268265_10877016
426 Ga0268265_11224194
427 Ga0265337_1023137
428 Ga0265326_10000931
429 Ga0265319_1000863
430 Ga0265319_1105065
431 Ga0265318_10000275
432 Ga0265323_10084300
433 Ga0265336_10000043
434 Ga0265338_10000142
435 Ga0265324_10056337
436 Ga0265340_10000006
437 Ga0265327_10036385
438 Ga0265327_10073127
439 Ga0265327_10156696
440 Ga0265327_10199116
441 Ga0265316_10010215
442 Ga0265342_10115263
443 Ga0307405_10096705
444 Ga0307406_10166733
445 Ga0307407_10172862
446 Ga0307407_10770854
447 Ga0307412_10776151
448 Ga0307409_101659302
449 Ga0307416_100548224
450 Ga0307414_10507784
451 Ga0307415_100740167
452 Ga0373943_0082786
453 Ga0395900_0648798
454 Ga0395898_0004042
455 Ga0395898_0029242
456 Ga0395898_0980642
457 Ga0436364_0012596
458 Ga0436364_0101374
459 Ga0436364_0362343
460 Ga0436364_0474529
461 Ga0436364_0727760
462 Ga0436364_0781728
463 Ga0436364_0804559
464 Ga0436364_1282248
465 Ga0395901_0037835
466 Ga0395901_0248922
467 Ga0436365_0889615
468 Ga0436365_1414304
469 Ga0436365_1598222
470 Ga0436365_1720692
471 Ga0436365_1904562
472 Ga0436365_1934402
473 Ga0436363_0256943
474 Ga0436363_0793862
475 Ga0436363_1000975
476 Ga0436362_0971514
477 Ga0439463_011539
478 Ga0466969_0041808
479 Ga0466969_0058175
480 Ga0466965_0103023
481 Ga0466966_0087705
482 Ga0466966_0247169
483 Ga0466966_0259260
484 Ga0466961_0023348
485 Ga0466961_0032273
486 Ga0466961_0119374
487 Ga0466961_0180008
488 Ga0466961_0243684
489 Ga0466961_0469499
490 Ga0466963_0001026
491 Ga0466963_0128014
492 Ga0453684_0534074
493 Ga0466971_0050998
494 Ga0466971_0241517
495 Ga0466968_0161627
496 Ga0466970_0053794
497 Ga0466970_0265577
498 Ga0466960_0001761
499 Ga0466960_0109936
500 Ga0466959_0039917
501 Ga0466959_0159366
502 Ga0466959_0230590
503 Ga0466959_0258356
504 Ga0466959_0366151
505 Ga0466958_0008187
506 Ga0466958_0023806
507 Ga0466958_0059014
508 Ga0466958_0059538
509 Ga0466958_0146010
510 Ga0466967_0041134
511 Ga0466967_0096012
512 Ga0466967_0234485
513 Ga0466967_0594156
514 Ga0495653_0004713
515 Ga0495618_0000035
516 Ga0495630_0000610
517 Ga0495645_0000033
518 Ga0495656_0201921
519 Ga0495668_0325681
520 Ga0495588_0061152
521 Ga0495657_0000027
522 Ga0495658_0355178
523 Ga0495604_0293188
524 Ga0496102_0143115
525 Ga0496102_0335175
526 Ga0496102_0581070
527 Ga0496103_0399688
528 Ga0496106_0069042
529 Ga0496107_0049671
530 Ga0496108_0295104
531 Ga0496109_0004801
532 Ga0496109_0119789
533 Ga0496109_0229745
534 Ga0496111_0117258
535 Ga0496111_0458085
536 Ga0496112_0005170
537 Ga0496112_0420540
538 Ga0496112_0781175
539 Ga0496114_0040613
540 Ga0496115_0021403
541 Ga0496115_0428549
542 Ga0496119_0207546
543 Ga0496121_0366358
544 Ga0501317_026362
545 Ga0501321_027592
546 Ga0501034_0185517
547 Ga0501069_0038355
548 Ga0501079_0119065
549 nmdc:mga0qj67_79691_c1
550 Ga0495601_0003409
551 Ga0495612_0000369
552 Ga0500616_0006301
553 Ga0500622_0005115
554 Ga0466962_0045117

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00573

Ribosomal_L4

Ribosomal protein L4/L1 family

20

208

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
8c97-assembly1.cif.gz_E cryo-em captures early ribosome assembly in action 0.8347 3 201
8c9a-assembly1.cif.gz_E cryo-em captures early ribosome assembly in action 0.8333 8 201
8c9b-assembly1.cif.gz_E cryo-em captures early ribosome assembly in action 0.8259 3 201
8c97-assembly1.cif.gz_E cryo-em captures early ribosome assembly in action 0.8196 3 201
8c9b-assembly1.cif.gz_E cryo-em captures early ribosome assembly in action 0.8112 3 201
ID Description Score Start End Superfamily
af_Q2FW07_2_206_3.40.1370.10 Alpha Beta;3-Layer(aba) Sandwich;Ribosomal Protein L4; Chain: A;;Ribosomal protein L4/L1 0.7142 2 199 3.40.1370.10
1dmgA00 Alpha Beta;3-Layer(aba) Sandwich;Ribosomal Protein L4; Chain: A;;Ribosomal protein L4/L1 0.7135 2 199 3.40.1370.10
af_K7MAT5_102_317_3.40.1370.10 Alpha Beta;3-Layer(aba) Sandwich;Ribosomal Protein L4; Chain: A;;Ribosomal protein L4/L1 0.701 3 205 3.40.1370.10
1dmgA00 Alpha Beta;3-Layer(aba) Sandwich;Ribosomal Protein L4; Chain: A;;Ribosomal protein L4/L1 0.6983 2 199 3.40.1370.10
af_P60723_1_201_3.40.1370.10 Alpha Beta;3-Layer(aba) Sandwich;Ribosomal Protein L4; Chain: A;;Ribosomal protein L4/L1 0.6969 3 201 3.40.1370.10
ID Description Score Start End GO Terms
AF-A0A7V8ZDN3-F1-model_v4 Large ribosomal subunit protein uL4 (50S ribosomal protein L4) 0.9356 86 201 GO:0003735
GO:0005840
GO:0006412
GO:1990904
AF-A0A1F7TNV7-F1-model_v4 Large ribosomal subunit protein uL4 (50S ribosomal protein L4) 0.9047 97 204 GO:0003735
GO:0005840
GO:0006412
GO:1990904
AF-A0A1G3V270-F1-model_v4 Large ribosomal subunit protein uL4 (50S ribosomal protein L4) 0.8866 100 203 GO:0003735
GO:0005840
GO:0006412
GO:1990904
AF-A0A1F7TNV7-F1-model_v4 Large ribosomal subunit protein uL4 (50S ribosomal protein L4) 0.882 97 204 GO:0003735
GO:0005840
GO:0006412
GO:1990904
AF-A0A0H4TX09-F1-model_v4 Large ribosomal subunit protein uL4 (50S ribosomal protein L4) 0.8745 91 208 GO:0003735
GO:0005840
GO:0006412
GO:1990904

Map