F381912

General Info

Members Datasets Scaffolds Average Seq Length
277 178 554 294

Family's Representative Sequence

Representative Sequence 3300039438|Ga0436360_0809015|Ga0436360_0809015_211_1269
Length 339
Sequence VARSVAAAGRADNDGSIQDGGAKTDELGTRLPQNCSRFRHLTATVAVEFGCGGSGVDRGGALMKGIILAGGHGTRLYPATLAVSKQLLPVYDKPMVYYPLTTLMLAGIREILVITTPTEAPRFASLLRDGAQWGISIQYAEQTRPDGLAQALIIGEGFIAGDRVLLAKLRQAAAPRPGATVFGYQVRHPEAYGVVEFAADGEPIAIVEKPRQARSHWAVTGLYFYDDAASEIARSLKPSARGELEISDLNNVYLARGLLSVERLGRGFAWFDTGTHDSLLEASEFVRTIELRQGLKIACVEEVAYRMGYIDEEQLLRIARELGNSGYGAYLERVVADPW

Samples

Sample ID Description Type Environment
1 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
2 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
3 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
4 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
5 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
11 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
14 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
15 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
16 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
17 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
20 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
21 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
22 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
23 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
24 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
25 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
26 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
27 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
28 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
30 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
31 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
32 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
33 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
34 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
35 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
40 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
41 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
42 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
43 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
44 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
45 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
46 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
47 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
48 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
49 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
50 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
51 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
52 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
53 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
54 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
55 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
57 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
58 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
59 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
60 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
78 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
81 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
82 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
83 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
84 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
85 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
86 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
87 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
88 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
89 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
90 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
91 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
92 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
93 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
94 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
95 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
96 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
97 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
98 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
99 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
100 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
101 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
102 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
103 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
104 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
105 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
106 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
107 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
108 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
109 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
110 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
111 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
112 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
113 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
114 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
115 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
116 3300042000 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z081617_5539 Metagenome Rhizosphere
117 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
118 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
119 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
120 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
121 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
122 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
123 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
124 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
125 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
126 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
127 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
128 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
129 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
130 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
131 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
132 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
133 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
134 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
135 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
136 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
137 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
145 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
146 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
147 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
148 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
149 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
150 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
151 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
152 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
153 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
154 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
155 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
156 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
157 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
158 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
159 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
160 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
161 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
162 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
163 3300053737 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 endosphere Metagenome Endosphere
164 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
165 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
166 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
167 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
168 2643221736 Bosea sp. Root483D1 Isolate Unclassified
169 2791355048 Caulobacter flavus CGMCC1 15093 Isolate Rhizosphere
170 2795385470 Labedaea rhizosphaerae DSM 45361 Isolate Rhizosphere
171 2838707686 Rhizobium leguminosarum SEMIA 430 Isolate Nodule
172 2849560528 Caulobacter zeae 410 Isolate Unclassified
173 2849573788 Caulobacter endophyticus 774 Isolate Unclassified
174 2851153111 Caulobacter radicis 736 Isolate Unclassified
175 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere
176 2919160200 Paenibacillus sp. 2003 Isolate Unclassified
177 2996632988 Paenibacillus sp. P32E Isolate Rhizosphere
178 8057529695 Bosea vestrisii A18/4-2 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 95.67
Metatranscriptomes 0
Isolates 4.33

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.69
Nodule 0.72
Rhizoplane 0.36
Rhizosphere 87.36
Stem 0
Stem Tuber 0
Unclassified 0.36

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436360_0809015 3300039438 Bacteria 5534
2 JGI25159J45721_1003347 3300002987 Bacteria 5718
3 JGI25151J46595_10006791 3300003187 Bacteria 5699
4 Ga0065165_1000048 3300005262 Bacteria 196539
5 Ga0070677_10033841 3300005333 Bacteria 1971
6 Ga0070689_100127625 3300005340 Bacteria 2037
7 Ga0070692_10251770 3300005345 Bacteria 1058
8 Ga0070669_100006749 3300005353 Bacteria 8264
9 Ga0070713_100000842 3300005436 Bacteria 19632
10 Ga0070705_100198375 3300005440 Bacteria 1374
11 Ga0070694_100218247 3300005444 Bacteria 1429
12 Ga0070708_100000051 3300005445 Bacteria 79587
13 Ga0070708_100368639 3300005445 Bacteria 1354
14 Ga0070662_100213410 3300005457 Bacteria 1537
15 Ga0070706_100051710 3300005467 Bacteria 3793
16 Ga0070706_100389154 3300005467 Bacteria 1298
17 Ga0070707_100012685 3300005468 Bacteria 7870
18 Ga0070697_100221701 3300005536 Bacteria 1612
19 Ga0070686_100168109 3300005544 Bacteria 1549
20 Ga0070665_100001329 3300005548 Bacteria 29387
21 Ga0068866_10037382 3300005718 Bacteria 2384
22 Ga0068870_10009264 3300005840 Bacteria 4471
23 Ga0068863_100479041 3300005841 Bacteria 1223
24 Ga0068860_100153154 3300005843 Bacteria 2221
25 Ga0068862_100001857 3300005844 Bacteria 19143
26 Ga0081455_10000269 3300005937 Bacteria 68501
27 Ga0081538_10066670 3300005981 Bacteria 2016
28 Ga0075363_100127767 3300006048 Bacteria 1424
29 Ga0070712_100000812 3300006175 Bacteria 18572
30 Ga0070712_100249109 3300006175 Bacteria 1418
31 Ga0097621_100133916 3300006237 Bacteria 2112
32 Ga0068871_100061648 3300006358 Bacteria 3064
33 Ga0075428_100097995 3300006844 Bacteria 3196
34 Ga0075428_100135672 3300006844 Bacteria 2676
35 Ga0075430_100050635 3300006846 Bacteria 3501
36 Ga0075430_100064916 3300006846 Bacteria 3067
37 Ga0075430_100184688 3300006846 Bacteria 1734
38 Ga0075431_100058008 3300006847 Bacteria 3993
39 Ga0075431_100093118 3300006847 Bacteria 3111
40 Ga0075434_100011916 3300006871 Bacteria 8223
41 Ga0075434_100018172 3300006871 Bacteria 6788
42 Ga0075435_100012273 3300007076 Bacteria 6337
43 Ga0105244_10097578 3300009036 Bacteria 1440
44 Ga0105240_10285145 3300009093 Bacteria 1896
45 Ga0111539_10008237 3300009094 Bacteria 13268
46 Ga0111539_10105023 3300009094 Bacteria 3314
47 Ga0111539_10243514 3300009094 Bacteria 2094
48 Ga0114129_10451058 3300009147 Bacteria 1687
49 Ga0105242_10073588 3300009176 Bacteria 2841
50 Ga0105248_10023847 3300009177 Bacteria 6801
51 Ga0105249_10000663 3300009553 Bacteria 31237
52 Ga0105249_10042514 3300009553 Bacteria 4133
53 Ga0105239_10980175 3300010375 Bacteria 972
54 Ga0157370_10039472 3300013104 Bacteria 4562
55 Ga0157378_10076555 3300013297 Bacteria 3015
56 Ga0157378_10318132 3300013297 Bacteria 1511
57 Ga0163162_10015232 3300013306 Bacteria 7511
58 Ga0163162_10246888 3300013306 Bacteria 1917
59 Ga0157375_10150690 3300013308 Bacteria 2461
60 Ga0157375_10211418 3300013308 Bacteria 2097
61 Ga0157375_10320585 3300013308 Bacteria 1714
62 Ga0163163_10026041 3300014325 Bacteria 5585
63 Ga0157380_10039344 3300014326 Bacteria 3677
64 Ga0157376_10066257 3300014969 Bacteria 3053
65 Ga0182007_10047238 3300015262 Bacteria 1424
66 Ga0163161_10155538 3300017792 Bacteria 1740
67 Ga0213873_10016712 3300021358 Bacteria 1663
68 Ga0213872_10051341 3300021361 Bacteria 1872
69 Ga0213871_10026818 3300021441 Bacteria 1477
70 Ga0209566_100228 3300025225 Bacteria 54872
71 Ga0209130_1000071 3300025284 Bacteria 178273
72 Ga0209025_1000488 3300025294 Bacteria 76500
73 Ga0209025_1002438 3300025294 Bacteria 19722
74 Ga0209256_1009858 3300025299 Bacteria 4109
75 Ga0207426_1005102 3300025302 Bacteria 6128
76 Ga0207643_10001051 3300025908 Bacteria 16358
77 Ga0207707_10014896 3300025912 Bacteria 6772
78 Ga0207707_10527918 3300025912 Bacteria 1005
79 Ga0207693_10003414 3300025915 Bacteria 13561
80 Ga0207693_10012757 3300025915 Bacteria 6783
81 Ga0207693_10087104 3300025915 Bacteria 2447
82 Ga0207663_10143235 3300025916 Bacteria 1668
83 Ga0207646_10013422 3300025922 Bacteria 7836
84 Ga0207681_10059388 3300025923 Bacteria 2621
85 Ga0207650_10225360 3300025925 Bacteria 1510
86 Ga0207659_10161159 3300025926 Bacteria 1761
87 Ga0207706_10058880 3300025933 Bacteria 3383
88 Ga0207711_10387834 3300025941 Bacteria 1297
89 Ga0207712_10000923 3300025961 Bacteria 21242
90 Ga0207712_10058195 3300025961 Bacteria 2730
91 Ga0207639_10169414 3300026041 Bacteria 1848
92 Ga0207708_10193973 3300026075 Bacteria 1618
93 Ga0207641_10248056 3300026088 Bacteria 1662
94 Ga0207641_10460039 3300026088 Bacteria 1231
95 Ga0207674_10047670 3300026116 Bacteria 4390
96 Ga0207675_100049522 3300026118 Bacteria 3921
97 Ga0207698_10366870 3300026142 Bacteria 1365
98 Ga0207428_10106044 3300027907 Bacteria 2167
99 Ga0268266_10001274 3300028379 Bacteria 30795
100 Ga0268266_10059559 3300028379 Bacteria 3290
101 Ga0268265_10005637 3300028380 Bacteria 8554
102 Ga0265323_10021215 3300028653 Bacteria 2491
103 Ga0265336_10006970 3300028666 Bacteria 4046
104 Ga0265338_10004085 3300028800 Bacteria 19992
105 Ga0265338_10004546 3300028800 Bacteria 18680
106 Ga0265330_10006833 3300031235 Bacteria 5617
107 Ga0265320_10090216 3300031240 Bacteria 1420
108 Ga0265325_10001125 3300031241 Bacteria 19158
109 Ga0265340_10000600 3300031247 Bacteria 20099
110 Ga0265331_10000337 3300031250 Bacteria 50233
111 Ga0265331_10004912 3300031250 Bacteria 8219
112 Ga0265327_10024067 3300031251 Bacteria 3587
113 Ga0265316_10002330 3300031344 Bacteria 19853
114 Ga0307408_100042997 3300031548 Bacteria 3213
115 Ga0316579_10029756 3300031691 Bacteria 2493
116 Ga0265314_10000017 3300031711 Bacteria 340498
117 Ga0265342_10000375 3300031712 Bacteria 49288
118 Ga0265342_10158513 3300031712 Bacteria 1252
119 Ga0316576_10012505 3300031727 Bacteria 5609
120 Ga0316576_10028273 3300031727 Bacteria 3951
121 Ga0316576_10032345 3300031727 Bacteria 3717
122 Ga0316576_10048736 3300031727 Bacteria 3074
123 Ga0316576_10063989 3300031727 Bacteria 2701
124 Ga0316576_10282709 3300031727 Bacteria 1242
125 Ga0316578_10081136 3300031728 Bacteria 1930
126 Ga0316578_10102264 3300031728 Bacteria 1718
127 Ga0316578_10164984 3300031728 Bacteria 1335
128 Ga0316577_10050868 3300031733 Bacteria 2313
129 Ga0316577_10199825 3300031733 Bacteria 1130
130 Ga0307416_100276066 3300032002 Bacteria 1654
131 Ga0316583_10004110 3300032133 Bacteria 5171
132 Ga0316580_10040882 3300032139 Bacteria 1432
133 Ga0307510_10000023 3300033180 Bacteria 155640
134 Ga0316574_0003903 3300035398 Bacteria 7750
135 Ga0316574_0085022 3300035398 Bacteria 2013
136 Ga0316574_0086684 3300035398 Bacteria 1993
137 Ga0316582_0003903 3300036647 Bacteria 7432
138 Ga0316582_0121931 3300036647 Bacteria 1745
139 Ga0316582_0162280 3300036647 Bacteria 1514
140 Ga0316584_0005308 3300036712 Bacteria 8631
141 Ga0316584_0024070 3300036712 Bacteria 4453
142 Ga0316584_0055077 3300036712 Bacteria 2978
143 Ga0316584_0228492 3300036712 Bacteria 1365
144 Ga0395900_0022611 3300037418 Bacteria 6435
145 Ga0395898_0026035 3300037466 Bacteria 5890
146 Ga0395905_0000034 3300037471 Bacteria 275823
147 Ga0395901_0087638 3300038443 Unclassified 3255
148 Ga0400490_19689 3300038726 Bacteria 38346
149 Ga0400490_22244 3300038726 Bacteria 2192
150 Ga0400488_08327 3300038741 Bacteria 1748
151 Ga0400488_37153 3300038741 Bacteria 3360
152 Ga0400486_04749 3300038742 Bacteria 12452
153 Ga0400483_005430 3300039062 Bacteria 50409
154 Ga0400483_243643 3300039062 Bacteria 18202
155 Ga0400489_13493 3300039093 Bacteria 2618
156 Ga0400489_14732 3300039093 Bacteria 38869
157 Ga0400489_32106 3300039093 Bacteria 2884
158 Ga0436360_0002643 3300039438 Bacteria 1256
159 Ga0436361_0100845 3300039447 Bacteria 1405
160 Ga0436361_0350677 3300039447 Bacteria 1175
161 Ga0436361_1134769 3300039447 Bacteria 2962
162 Ga0436363_1602943 3300039450 Bacteria 1483
163 Ga0436363_1644976 3300039450 Bacteria 1123
164 Ga0436362_0074827 3300039453 Bacteria 4854
165 Ga0436362_1030953 3300039453 Bacteria 998
166 Ga0436362_1040987 3300039453 Bacteria 1513
167 Ga0439437_005327 3300042000 Bacteria 1414
168 Ga0450893_0010473 3300042532 Bacteria 1524
169 Ga0451577_0000022 3300042876 Bacteria 437063
170 Ga0451577_0000075 3300042876 Bacteria 229905
171 Ga0451577_0003816 3300042876 Bacteria 16402
172 Ga0451577_0128933 3300042876 Bacteria 2268
173 Ga0451577_0252390 3300042876 Bacteria 1597
174 Ga0451577_0270452 3300042876 Bacteria 1539
175 Ga0451577_0327536 3300042876 Bacteria 1389
176 Ga0451577_0469884 3300042876 Bacteria 1142
177 Ga0453683_0000023 3300044673 Bacteria 264522
178 Ga0453683_0000991 3300044673 Bacteria 26762
179 Ga0453683_0017580 3300044673 Bacteria 4603
180 Ga0453683_0051479 3300044673 Bacteria 2579
181 Ga0453683_0055716 3300044673 Bacteria 2474
182 Ga0453683_0106015 3300044673 Bacteria 1766
183 Ga0466963_0079853 3300044694 Bacteria 2214
184 Ga0453684_0000033 3300044712 Bacteria 734012
185 Ga0453684_0000501 3300044712 Bacteria 153475
186 Ga0453684_0000510 3300044712 Bacteria 151055
187 Ga0453684_0000648 3300044712 Bacteria 125276
188 Ga0453684_0000661 3300044712 Bacteria 123767
189 Ga0453684_0005768 3300044712 Bacteria 24177
190 Ga0453684_0010344 3300044712 Bacteria 15969
191 Ga0453684_0011149 3300044712 Bacteria 15153
192 Ga0453684_0022212 3300044712 Bacteria 9430
193 Ga0453684_0040897 3300044712 Bacteria 6283
194 Ga0453684_0057619 3300044712 Bacteria 5026
195 Ga0453684_0074650 3300044712 Bacteria 4267
196 Ga0453684_0076558 3300044712 Bacteria 4200
197 Ga0453684_0091466 3300044712 Bacteria 3755
198 Ga0453684_0100427 3300044712 Bacteria 3541
199 Ga0453684_0113570 3300044712 Bacteria 3285
200 Ga0453684_0130988 3300044712 Bacteria 3009
201 Ga0453684_0225901 3300044712 Bacteria 2165
202 Ga0453684_0290716 3300044712 Bacteria 1861
203 Ga0453684_0313573 3300044712 Bacteria 1779
204 Ga0451576_0000044 3300045051 Bacteria 334467
205 Ga0451576_0000283 3300045051 Bacteria 124222
206 Ga0451576_0003233 3300045051 Bacteria 22667
207 Ga0451576_0014707 3300045051 Bacteria 8701
208 Ga0451576_0014935 3300045051 Bacteria 8626
209 Ga0451576_0058892 3300045051 Bacteria 4011
210 Ga0451576_0134123 3300045051 Bacteria 2582
211 Ga0451576_0209727 3300045051 Bacteria 2034
212 Ga0451576_0221624 3300045051 Bacteria 1975
213 Ga0451576_0532920 3300045051 Bacteria 1234
214 Ga0495617_000086 3300046452 Bacteria 67731
215 Ga0495584_0004544 3300046491 Bacteria 7448
216 Ga0495628_0076613 3300046516 Bacteria 2602
217 Ga0495644_0000074 3300046523 Bacteria 48963
218 Ga0495609_0000262 3300046538 Bacteria 49441
219 Ga0495633_0000649 3300046558 Bacteria 32293
220 Ga0495611_0000341 3300046648 Bacteria 30353
221 Ga0495661_0018648 3300046665 Bacteria 4557
222 Ga0495671_0004123 3300046692 Bacteria 8761
223 Ga0495677_0000096 3300047445 Bacteria 44583
224 Ga0495673_0004026 3300047469 Bacteria 9377
225 Ga0496114_0497373 3300048917 Bacteria 1078
226 Ga0496116_0000684 3300048919 Bacteria 44026
227 Ga0495682_0000080 3300049460 Bacteria 84736
228 Ga0501031_0036184 3300049568 Bacteria 3221
229 Ga0501034_0403091 3300049571 Bacteria 1290
230 Ga0501038_0016624 3300049574 Bacteria 6671
231 Ga0501040_0001696 3300049576 Bacteria 14115
232 Ga0501040_0070150 3300049576 Bacteria 2418
233 Ga0501041_0144296 3300049577 Bacteria 1485
234 Ga0501042_0002053 3300049578 Bacteria 12212
235 Ga0501046_0003964 3300049580 Bacteria 13513
236 Ga0501068_0014693 3300049584 Bacteria 4480
237 Ga0501070_0004361 3300049586 Bacteria 12162
238 Ga0501071_0034190 3300049587 Bacteria 3616
239 Ga0501077_0015839 3300049593 Bacteria 4748
240 Ga0501223_004414 3300049663 Bacteria 3012
241 Ga0501079_0001904 3300049741 Bacteria 14960
242 Ga0501081_0000727 3300049743 Bacteria 19202
243 Ga0501083_0339454 3300049744 Bacteria 977
244 Ga0501045_0039422 3300049824 Bacteria 3437
245 nmdc:mga09592_519093_c1 3300050508 Bacteria 1025
246 nmdc:mga0qj67_196154_c1 3300050509 Bacteria 1641
247 nmdc:mga0qj67_26506_c1 3300050509 Bacteria 4487
248 nmdc:mga0qj67_411828_c1 3300050509 Bacteria 1090
249 nmdc:mga06r32_117690_c1 3300050510 Bacteria 2619
250 nmdc:mga06r32_76170_c1 3300050510 Bacteria 3257
251 nmdc:mga08y16_77565_c1 3300050511 Bacteria 3464
252 nmdc:mga0n895_68350_c1 3300050512 Bacteria 3520
253 nmdc:mga08x19_72316_c1 3300050514 Bacteria 2249
254 nmdc:mga0a205_449649_c1 3300050515 Bacteria 1148
255 Ga0495601_0207814 3300053077 Bacteria 1279
256 Ga0500643_003171 3300053087 Bacteria 8039
257 Ga0500616_0073655 3300053153 Bacteria 1733
258 Ga0500601_000727 3300053737 Bacteria 4338
259 Ga0501084_0017048 3300054114 Bacteria 6034
260 Ga0501084_0021093 3300054114 Bacteria 5434
261 Ga0501084_0096360 3300054114 Bacteria 2485
262 Ga0501082_0002481 3300060353 Bacteria 16170
263 Ga0501082_0158602 3300060353 Bacteria 1966
264 Ga0530510_0013766 3300061734 Bacteria 5695
265 Ga0530510_0250459 3300061734 Bacteria 1320
266 2512730014 2512564039 Bacteria 8739048
267 2644745031 2643221736 Bacteria 6608466
268 2792458684 2791355048 Bacteria 5832535
269 2795781370 2795385470 Bacteria 8317180
270 2838708735 2838707686 Bacteria 6619912
271 2849561258 2849560528 Bacteria 5393480
272 2849576347 2849573788 Bacteria 5421256
273 2851157293 2851153111 Bacteria 5542585
274 2898332954 2898329390 Bacteria 5168154
275 2919165154 2919160200 Bacteria 6929020
276 2996637719 2996632988 Bacteria 6921523
277 8057531277 8057529695 Bacteria 6306553
278 Ga0436360_0809015
279 JGI25159J45721_1003347
280 JGI25151J46595_10006791
281 Ga0065165_1000048
282 Ga0070677_10033841
283 Ga0070689_100127625
284 Ga0070692_10251770
285 Ga0070669_100006749
286 Ga0070713_100000842
287 Ga0070705_100198375
288 Ga0070694_100218247
289 Ga0070708_100000051
290 Ga0070708_100368639
291 Ga0070662_100213410
292 Ga0070706_100051710
293 Ga0070706_100389154
294 Ga0070707_100012685
295 Ga0070697_100221701
296 Ga0070686_100168109
297 Ga0070665_100001329
298 Ga0068866_10037382
299 Ga0068870_10009264
300 Ga0068863_100479041
301 Ga0068860_100153154
302 Ga0068862_100001857
303 Ga0081455_10000269
304 Ga0081538_10066670
305 Ga0075363_100127767
306 Ga0070712_100000812
307 Ga0070712_100249109
308 Ga0097621_100133916
309 Ga0068871_100061648
310 Ga0075428_100097995
311 Ga0075428_100135672
312 Ga0075430_100050635
313 Ga0075430_100064916
314 Ga0075430_100184688
315 Ga0075431_100058008
316 Ga0075431_100093118
317 Ga0075434_100011916
318 Ga0075434_100018172
319 Ga0075435_100012273
320 Ga0105244_10097578
321 Ga0105240_10285145
322 Ga0111539_10008237
323 Ga0111539_10105023
324 Ga0111539_10243514
325 Ga0114129_10451058
326 Ga0105242_10073588
327 Ga0105248_10023847
328 Ga0105249_10000663
329 Ga0105249_10042514
330 Ga0105239_10980175
331 Ga0157370_10039472
332 Ga0157378_10076555
333 Ga0157378_10318132
334 Ga0163162_10015232
335 Ga0163162_10246888
336 Ga0157375_10150690
337 Ga0157375_10211418
338 Ga0157375_10320585
339 Ga0163163_10026041
340 Ga0157380_10039344
341 Ga0157376_10066257
342 Ga0182007_10047238
343 Ga0163161_10155538
344 Ga0213873_10016712
345 Ga0213872_10051341
346 Ga0213871_10026818
347 Ga0209566_100228
348 Ga0209130_1000071
349 Ga0209025_1000488
350 Ga0209025_1002438
351 Ga0209256_1009858
352 Ga0207426_1005102
353 Ga0207643_10001051
354 Ga0207707_10014896
355 Ga0207707_10527918
356 Ga0207693_10003414
357 Ga0207693_10012757
358 Ga0207693_10087104
359 Ga0207663_10143235
360 Ga0207646_10013422
361 Ga0207681_10059388
362 Ga0207650_10225360
363 Ga0207659_10161159
364 Ga0207706_10058880
365 Ga0207711_10387834
366 Ga0207712_10000923
367 Ga0207712_10058195
368 Ga0207639_10169414
369 Ga0207708_10193973
370 Ga0207641_10248056
371 Ga0207641_10460039
372 Ga0207674_10047670
373 Ga0207675_100049522
374 Ga0207698_10366870
375 Ga0207428_10106044
376 Ga0268266_10001274
377 Ga0268266_10059559
378 Ga0268265_10005637
379 Ga0265323_10021215
380 Ga0265336_10006970
381 Ga0265338_10004085
382 Ga0265338_10004546
383 Ga0265330_10006833
384 Ga0265320_10090216
385 Ga0265325_10001125
386 Ga0265340_10000600
387 Ga0265331_10000337
388 Ga0265331_10004912
389 Ga0265327_10024067
390 Ga0265316_10002330
391 Ga0307408_100042997
392 Ga0316579_10029756
393 Ga0265314_10000017
394 Ga0265342_10000375
395 Ga0265342_10158513
396 Ga0316576_10012505
397 Ga0316576_10028273
398 Ga0316576_10032345
399 Ga0316576_10048736
400 Ga0316576_10063989
401 Ga0316576_10282709
402 Ga0316578_10081136
403 Ga0316578_10102264
404 Ga0316578_10164984
405 Ga0316577_10050868
406 Ga0316577_10199825
407 Ga0307416_100276066
408 Ga0316583_10004110
409 Ga0316580_10040882
410 Ga0307510_10000023
411 Ga0316574_0003903
412 Ga0316574_0085022
413 Ga0316574_0086684
414 Ga0316582_0003903
415 Ga0316582_0121931
416 Ga0316582_0162280
417 Ga0316584_0005308
418 Ga0316584_0024070
419 Ga0316584_0055077
420 Ga0316584_0228492
421 Ga0395900_0022611
422 Ga0395898_0026035
423 Ga0395905_0000034
424 Ga0395901_0087638
425 Ga0400490_19689
426 Ga0400490_22244
427 Ga0400488_08327
428 Ga0400488_37153
429 Ga0400486_04749
430 Ga0400483_005430
431 Ga0400483_243643
432 Ga0400489_13493
433 Ga0400489_14732
434 Ga0400489_32106
435 Ga0436360_0002643
436 Ga0436361_0100845
437 Ga0436361_0350677
438 Ga0436361_1134769
439 Ga0436363_1602943
440 Ga0436363_1644976
441 Ga0436362_0074827
442 Ga0436362_1030953
443 Ga0436362_1040987
444 Ga0439437_005327
445 Ga0450893_0010473
446 Ga0451577_0000022
447 Ga0451577_0000075
448 Ga0451577_0003816
449 Ga0451577_0128933
450 Ga0451577_0252390
451 Ga0451577_0270452
452 Ga0451577_0327536
453 Ga0451577_0469884
454 Ga0453683_0000023
455 Ga0453683_0000991
456 Ga0453683_0017580
457 Ga0453683_0051479
458 Ga0453683_0055716
459 Ga0453683_0106015
460 Ga0466963_0079853
461 Ga0453684_0000033
462 Ga0453684_0000501
463 Ga0453684_0000510
464 Ga0453684_0000648
465 Ga0453684_0000661
466 Ga0453684_0005768
467 Ga0453684_0010344
468 Ga0453684_0011149
469 Ga0453684_0022212
470 Ga0453684_0040897
471 Ga0453684_0057619
472 Ga0453684_0074650
473 Ga0453684_0076558
474 Ga0453684_0091466
475 Ga0453684_0100427
476 Ga0453684_0113570
477 Ga0453684_0130988
478 Ga0453684_0225901
479 Ga0453684_0290716
480 Ga0453684_0313573
481 Ga0451576_0000044
482 Ga0451576_0000283
483 Ga0451576_0003233
484 Ga0451576_0014707
485 Ga0451576_0014935
486 Ga0451576_0058892
487 Ga0451576_0134123
488 Ga0451576_0209727
489 Ga0451576_0221624
490 Ga0451576_0532920
491 Ga0495617_000086
492 Ga0495584_0004544
493 Ga0495628_0076613
494 Ga0495644_0000074
495 Ga0495609_0000262
496 Ga0495633_0000649
497 Ga0495611_0000341
498 Ga0495661_0018648
499 Ga0495671_0004123
500 Ga0495677_0000096
501 Ga0495673_0004026
502 Ga0496114_0497373
503 Ga0496116_0000684
504 Ga0495682_0000080
505 Ga0501031_0036184
506 Ga0501034_0403091
507 Ga0501038_0016624
508 Ga0501040_0001696
509 Ga0501040_0070150
510 Ga0501041_0144296
511 Ga0501042_0002053
512 Ga0501046_0003964
513 Ga0501068_0014693
514 Ga0501070_0004361
515 Ga0501071_0034190
516 Ga0501077_0015839
517 Ga0501223_004414
518 Ga0501079_0001904
519 Ga0501081_0000727
520 Ga0501083_0339454
521 Ga0501045_0039422
522 nmdc:mga09592_519093_c1
523 nmdc:mga0qj67_196154_c1
524 nmdc:mga0qj67_26506_c1
525 nmdc:mga0qj67_411828_c1
526 nmdc:mga06r32_117690_c1
527 nmdc:mga06r32_76170_c1
528 nmdc:mga08y16_77565_c1
529 nmdc:mga0n895_68350_c1
530 nmdc:mga08x19_72316_c1
531 nmdc:mga0a205_449649_c1
532 Ga0495601_0207814
533 Ga0500643_003171
534 Ga0500616_0073655
535 Ga0500601_000727
536 Ga0501084_0017048
537 Ga0501084_0021093
538 Ga0501084_0096360
539 Ga0501082_0002481
540 Ga0501082_0158602
541 Ga0530510_0013766
542 Ga0530510_0250459
543 2512730014
544 2644745031
545 2792458684
546 2795781370
547 2838708735
548 2849561258
549 2849576347
550 2851157293
551 2898332954
552 2919165154
553 2996637719
554 8057531277

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00483

NTP_transferase

Nucleotidyl transferase

64

289

0.95

PF12804

NTP_transf_3

MobA-like NTP transferase domain

65

182

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
1mp4-assembly1.cif.gz_A w224h variant of s. enterica rmla 0.9939 2 284
4hoc-assembly2.cif.gz_B crystal structure of glucose 1-phosphate thymidylyltransferase from aneurinibacillus thermoaerophilus complexed with udp-n-acetylglucosamine 0.9937 1 288
4hoc-assembly1.cif.gz_A crystal structure of glucose 1-phosphate thymidylyltransferase from aneurinibacillus thermoaerophilus complexed with udp-n-acetylglucosamine 0.9936 1 288
1mp3-assembly1.cif.gz_A l89t variant of s. enterica rmla 0.9931 2 285
1iim-assembly1.cif.gz_A thymidylyltransferase complexed with ttp 0.9927 2 284
ID Description Score Start End Superfamily
4b2xA00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9912 2 289 3.90.550.10
4b2xA00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9744 2 289 3.90.550.10
4ecmA00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9605 1 238 3.90.550.10
af_Q58501_1_209_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9184 1 223 3.90.550.10
4ecmA00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9148 1 238 3.90.550.10
ID Description Score Start End GO Terms
AF-A0A846Q3P9-F1-model_v4 glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) 1.003 1 98 GO:0008879
GO:0045226
AF-A0A351VA12-F1-model_v4 glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) 1.002 1 112 GO:0008879
GO:0045226
AF-A0A6I3TEG1-F1-model_v4 deleted 1.002 14 126
AF-A0A5K1ISM2-F1-model_v4 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) (dTDP-glucose pyrophosphorylase) (dTDP-glucose synthase) 1.002 1 80 GO:0008879
GO:0045226
AF-A0A434W677-F1-model_v4 glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) 1.001 1 144 GO:0008879
GO:0045226

Map