F378696

General Info

Members Datasets Scaffolds Average Seq Length
272 210 247 411

Family's Representative Sequence

Representative Sequence 3300053130|Ga0500642_0004196|Ga0500642_0004196_147_1502
Length 451
Sequence MSTCIRPPNRSSVRRQFDDYPHVTSFLPPEGAFSRLGAARRRLIMFGKKKQAELKAGDAKFLSEVRAAQVMDDMSRATWTLYLMALVVIVAIAWASTARVDEITRADGRVVPDGKEQVIASLEGGILRELFVREGMQVQEGQELAQLDPTRFESQQNEAQVKRAALRGTVARLTAEANGRALQFPSDVSALSSVVESETDAYNARKRGLDEAVRSNSRSIELVMKELGVSEAMSAKGLMSEVEVMRLRRQVNDLHLQSQERVNRFRQDASTELVRVQTDLAQIEEQLAGRQDVLRRTVLKSPVRGLVKNIRSVTVGGVVSPGAAMMEIVPITSRVLIEARVKPSEIGFLRVGQTAEVKLAAYDYTTYGGLKGKIEYISPDALGDTEKTAAPDQTYYRVMLRTERSTLREKGKPLTVLPGMTGSVEVRTGERSVLSFLLRPMLKSKEAFRER

Samples

Sample ID Description Type Environment
1 2511231025 Pantoea sp. YR343 Isolate Rhizosphere
2 2511231035 Pantoea sp. GM01 Isolate Rhizosphere
3 2585428057 Methylibium sp. YR605 Isolate Rhizosphere
4 2585428058 Methylibium sp. CF468 Isolate Rhizosphere
5 2585428062 Methylibium sp. CF059 Isolate Rhizosphere
6 2588253510 Rhizobacter sp. OV335 Isolate Rhizosphere
7 2597489888 Pseudomonas fluorescens SS101 Isolate Rhizosphere
8 2643221585 Pelomonas sp. Root662 Isolate Unclassified
9 2643221592 Rhizobacter sp. Root16D2 Isolate Unclassified
10 2643221625 Rhizobacter sp. Root29 Isolate Unclassified
11 2643221639 Pelomonas sp. Root1217 Isolate Unclassified
12 2643221646 Pelomonas sp. Root1237 Isolate Unclassified
13 2643221648 Rhizobacter sp. Root1238 Isolate Unclassified
14 2643221656 Pelomonas sp. Root405 Isolate Unclassified
15 2738541337 Pelomonas sp. BT06 Isolate Unclassified
16 2876601092 Pantoea endophytica 596 Isolate Unclassified
17 3007861166 Pseudomonas hamedanensis SWRI65 Isolate Rhizosphere
18 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
19 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
20 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
21 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
22 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
23 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
24 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
25 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
26 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
27 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
28 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
29 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
30 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
31 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
32 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
33 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
34 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
35 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
36 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
37 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
38 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
39 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
40 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
41 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
42 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
43 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
44 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
45 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
46 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
47 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
48 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
49 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
50 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
51 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
52 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
53 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
54 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
55 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
56 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
57 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
58 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
59 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
60 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
61 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
62 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
63 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
66 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
68 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
69 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
70 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
72 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
73 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
75 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
76 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
77 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
95 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
98 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
99 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
100 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
101 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
102 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
103 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
104 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
105 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
106 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
107 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
108 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
109 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
110 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
111 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
112 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
113 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
114 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
115 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
116 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
117 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
118 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
119 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
120 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
121 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
122 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
123 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
124 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
125 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
126 3300041463 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_7 MetaG Metagenome Rhizoplane
127 3300042000 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z081617_5539 Metagenome Rhizosphere
128 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
129 3300042118 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_082316_2156 Metagenome Rhizosphere
130 3300042120 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913L_E14_082316_2192 Metagenome Rhizosphere
131 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
132 3300042129 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_070516_95 Metagenome Rhizosphere
133 3300042130 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030L_E14_070516_97 Metagenome Rhizosphere
134 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
135 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
136 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
137 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
138 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
139 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
140 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
141 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
142 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
143 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
144 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
145 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
146 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
147 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
148 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
149 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
150 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
151 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
152 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
153 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
154 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
155 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
156 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
157 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
158 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
159 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
160 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
161 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
162 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
163 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
164 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
165 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
166 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
167 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
168 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
169 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
170 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
171 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
172 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
173 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
174 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
175 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
176 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
177 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
178 3300049129 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_B_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
179 3300049130 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
180 3300049514 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A25_B_5_drought Metagenome Rhizosphere
181 3300049528 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
182 3300049658 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F3_B_0_drought Metagenome Rhizosphere
183 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
184 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
185 3300049706 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_B_2_control Metagenome Rhizosphere
186 3300049759 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_A_4_drought Metagenome Rhizosphere
187 3300049761 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control Metagenome Rhizosphere
188 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
189 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
190 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
191 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
192 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
193 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
194 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
195 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
196 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
197 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
198 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
199 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
200 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
201 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
202 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
203 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
204 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
205 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
206 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
207 8015687852 Pseudomonas chlororaphis aurantiaca RP4 Isolate Rhizosphere
208 8016733728 Pantoea sp. SORGH_AS 659 Isolate Unclassified
209 8019499862 Kluyvera sp. 1366 Isolate Rhizosphere
210 8054347763 Pseudomonas carnis NWU Be30 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 89.71
Metatranscriptomes 1.1
Isolates 9.19

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 20.22
Nodule 0
Rhizoplane 3.31
Rhizosphere 56.25
Stem 0
Stem Tuber 0
Unclassified 20.22

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10002999 3300001979 Bacteria 7471
2 JGI25156J39149_1000326 3300002705 Bacteria 31351
3 JGI25154J39366_1000354 3300002738 Bacteria 26135
4 JGI25157J39369_1000163 3300002741 Bacteria 55914
5 JGI25152J39213_1000361 3300002773 Bacteria 28334
6 JGI25153J46596_10000753 3300003215 Bacteria 19818
7 JGI25153J46596_10006895 3300003215 Bacteria 5673
8 rootH1_10010320 3300003316 Bacteria 29974
9 rootH2_10058548 3300003320 Bacteria 4569
10 rootL2_10004649 3300003322 Bacteria 20682
11 rootL2_10085506 3300003322 Bacteria 3074
12 rootH1_10034297 3300003323 Bacteria 6715
13 rootH1_10077013 3300003323 Bacteria 9645
14 rootH1_10106404 3300003323 Bacteria 2382
15 rootH1_10240293 3300003323 Bacteria 1617
16 Ga0055539_1000886 3300003752 Bacteria 6819
17 Ga0055539_1001763 3300003752 Bacteria 3734
18 Ga0055533_1000006 3300003756 Bacteria 635559
19 Ga0055535_1001019 3300003761 Bacteria 17799
20 Ga0055529_1000175 3300003763 Bacteria 87829
21 Ga0055526_1000848 3300003771 Bacteria 22760
22 Ga0055531_10000203 3300003794 Bacteria 65490
23 Ga0058692_1000112 3300003856 Bacteria 52916
24 Ga0058692_1006906 3300003856 Bacteria 3063
25 Ga0065165_1000283 3300005262 Bacteria 86141
26 Ga0065165_1001215 3300005262 Bacteria 29678
27 Ga0070658_10177753 3300005327 Bacteria 1790
28 Ga0070690_100013245 3300005330 Bacteria 4870
29 Ga0070660_100186872 3300005339 Bacteria 1678
30 Ga0070673_100005304 3300005364 Bacteria 8234
31 Ga0068853_100082857 3300005539 Bacteria 2810
32 Ga0068855_100108336 3300005563 Bacteria 3191
33 Ga0068855_100121470 3300005563 Bacteria 2989
34 Ga0068857_100099598 3300005577 Bacteria 2607
35 Ga0068854_100004327 3300005578 Bacteria 8946
36 Ga0068856_100001213 3300005614 Bacteria 27067
37 Ga0068856_100040165 3300005614 Bacteria 4594
38 Ga0068852_100033410 3300005616 Bacteria 4270
39 Ga0068861_100040046 3300005719 Bacteria 3502
40 Ga0075366_10087362 3300006195 Bacteria 1866
41 Ga0075370_10009704 3300006353 Bacteria 5011
42 Ga0105251_10007191 3300009011 Bacteria 6916
43 Ga0105244_10000720 3300009036 Bacteria 28572
44 Ga0105244_10001972 3300009036 Bacteria 15873
45 Ga0105244_10014181 3300009036 Bacteria 4620
46 Ga0105250_10016053 3300009092 Bacteria 3056
47 Ga0105242_10110402 3300009176 Bacteria 2343
48 Ga0105237_10078628 3300009545 Bacteria 3288
49 Ga0105238_10237051 3300009551 Bacteria 1802
50 Ga0105246_10027859 3300011119 Bacteria 3707
51 Ga0157373_10000508 3300013100 Bacteria 30633
52 Ga0157371_10000203 3300013102 Bacteria 87175
53 Ga0157371_10000389 3300013102 Bacteria 55195
54 Ga0157371_10001221 3300013102 Bacteria 27328
55 Ga0157371_10003451 3300013102 Bacteria 14336
56 Ga0157369_10228376 3300013105 Bacteria 1946
57 Ga0157372_10055217 3300013307 Bacteria 4435
58 Ga0157372_10122901 3300013307 Bacteria 2983
59 Ga0157375_10000480 3300013308 Bacteria 36358
60 Ga0182005_1000390 3300015265 Bacteria 23920
61 Ga0213872_10009395 3300021361 Bacteria 4690
62 Ga0209674_100003 3300025226 Bacteria 2196646
63 Ga0209563_100010 3300025230 Bacteria 1337457
64 Ga0207427_100877 3300025231 Bacteria 13169
65 Ga0209258_100060 3300025242 Bacteria 319881
66 Ga0209258_100437 3300025242 Bacteria 47616
67 Ga0207425_1000410 3300025245 Bacteria 28898
68 Ga0209646_1000242 3300025246 Bacteria 56037
69 Ga0209026_1000311 3300025250 Bacteria 52155
70 Ga0209677_100274 3300025253 Bacteria 34497
71 Ga0209677_100396 3300025253 Bacteria 26411
72 Ga0209677_101726 3300025253 Bacteria 9098
73 Ga0209759_1000373 3300025256 Bacteria 56051
74 Ga0209759_1000818 3300025256 Bacteria 24711
75 Ga0209759_1005836 3300025256 Bacteria 4226
76 Ga0209129_1000144 3300025258 Bacteria 115999
77 Ga0209455_1000093 3300025272 Bacteria 220487
78 Ga0209673_1022259 3300025273 Bacteria 2191
79 Ga0209564_1000029 3300025295 Bacteria 505995
80 Ga0209758_1000043 3300025297 Bacteria 402310
81 Ga0209758_1000434 3300025297 Bacteria 70561
82 Ga0209050_1000197 3300025298 Bacteria 135303
83 Ga0209050_1005754 3300025298 Bacteria 7644
84 Ga0209051_1000674 3300025303 Bacteria 38231
85 Ga0209051_1012756 3300025303 Bacteria 4047
86 Ga0209257_1000017 3300025304 Bacteria 866287
87 Ga0209257_1020687 3300025304 Bacteria 2419
88 Ga0207696_1000048 3300025711 Bacteria 284649
89 Ga0207655_1002204 3300025728 Bacteria 16175
90 Ga0207655_1008634 3300025728 Bacteria 6437
91 Ga0207655_1012161 3300025728 Bacteria 5055
92 Ga0207655_1032149 3300025728 Bacteria 2403
93 Ga0207713_1016438 3300025735 Bacteria 3753
94 Ga0207705_10035278 3300025909 Bacteria 3578
95 Ga0207652_10177759 3300025921 Bacteria 1912
96 Ga0207686_10056986 3300025934 Bacteria 2458
97 Ga0207689_10050962 3300025942 Bacteria 3412
98 Ga0207667_10076003 3300025949 Bacteria 3486
99 Ga0207667_10105306 3300025949 Bacteria 2910
100 Ga0207667_10167775 3300025949 Bacteria 2257
101 Ga0207651_10000345 3300025960 Bacteria 19742
102 Ga0207640_10001287 3300025981 Bacteria 13638
103 Ga0207639_10038195 3300026041 Bacteria 3570
104 Ga0207639_10116533 3300026041 Bacteria 2187
105 Ga0207702_10001598 3300026078 Bacteria 22413
106 Ga0207702_10029209 3300026078 Bacteria 4587
107 Ga0207648_10240947 3300026089 Bacteria 1610
108 Ga0207675_100056399 3300026118 Bacteria 3664
109 Ga0209371_1000062 3300027312 Bacteria 219057
110 Ga0209371_1004550 3300027312 Bacteria 5952
111 Ga0209974_10003188 3300027876 Bacteria 5934
112 Ga0268264_10099649 3300028381 Bacteria 2522
113 Ga0307517_10037350 3300028786 Bacteria 5428
114 Ga0307515_10000011 3300028794 Bacteria 633903
115 Ga0307515_10000842 3300028794 Bacteria 70481
116 Ga0307515_10002513 3300028794 Bacteria 39723
117 Ga0307515_10012271 3300028794 Bacteria 16134
118 Ga0307515_10167270 3300028794 Bacteria 2210
119 Ga0265324_10001776 3300029957 Bacteria 11797
120 Ga0268256_1000088 3300030500 Bacteria 156662
121 Ga0268256_1003589 3300030500 Bacteria 6916
122 Ga0307512_10081051 3300030522 Bacteria 2331
123 Ga0265328_10015282 3300031239 Bacteria 3010
124 Ga0265327_10002230 3300031251 Bacteria 21082
125 Ga0307513_10038720 3300031456 Bacteria 5292
126 Ga0307513_10041837 3300031456 Bacteria 5052
127 Ga0307513_10140635 3300031456 Bacteria 2341
128 Ga0307509_10132026 3300031507 Bacteria 2451
129 Ga0307408_100000030 3300031548 Bacteria 223389
130 Ga0307508_10000333 3300031616 Bacteria 57002
131 Ga0307514_10009121 3300031649 Bacteria 8372
132 Ga0307514_10053720 3300031649 Bacteria 3107
133 Ga0307516_10036821 3300031730 Bacteria 4894
134 Ga0307516_10040033 3300031730 Bacteria 4667
135 Ga0307516_10044603 3300031730 Bacteria 4385
136 Ga0307405_10026056 3300031731 Bacteria 3367
137 Ga0307416_100185060 3300032002 Bacteria 1957
138 Ga0307411_10029821 3300032005 Bacteria 3337
139 Ga0307507_10063485 3300033179 Bacteria 3419
140 Ga0373951_0004455 3300035091 Bacteria 3326
141 Ga0373939_0000302 3300035114 Bacteria 12785
142 Ga0373931_0000150 3300035691 Bacteria 30766
143 Ga0373931_0035830 3300035691 Bacteria 2582
144 Ga0395898_0027863 3300037466 Bacteria 5666
145 Ga0395905_0000678 3300037471 Bacteria 45181
146 Ga0395905_0054368 3300037471 Bacteria 3747
147 Ga0395901_0006809 3300038443 Bacteria 11541
148 Ga0436361_0725841 3300039447 Bacteria 7894
149 Ga0439438_000036 3300041405 Bacteria 66915
150 Ga0439447_003902 3300041407 Bacteria 5230
151 Ga0451789_1174228 3300041443 Bacteria 1341
152 Ga0451789_1340901 3300041443 Bacteria 1364
153 Ga0451795_1635534 3300041456 Bacteria 1391
154 Ga0451800_0504098 3300041459 Bacteria 1688
155 Ga0451800_1105758 3300041459 Bacteria 2063
156 Ga0451804_0069164 3300041463 Bacteria 1369
157 Ga0439437_000436 3300042000 Bacteria 4059
158 Ga0439432_000944 3300042006 Bacteria 10949
159 Ga0450914_000724 3300042118 Bacteria 1736
160 Ga0450917_000023 3300042120 Bacteria 7362
161 Ga0450890_000111 3300042127 Bacteria 13200
162 Ga0450891_000384 3300042129 Bacteria 4606
163 Ga0450892_000366 3300042130 Bacteria 5369
164 Ga0451577_0001771 3300042876 Bacteria 27782
165 Ga0451577_0173053 3300042876 Bacteria 1946
166 Ga0466969_0004405 3300044656 Bacteria 7490
167 Ga0466966_0001100 3300044684 Bacteria 17315
168 Ga0466961_0025833 3300044693 Bacteria 3775
169 Ga0466963_0174116 3300044694 Bacteria 1501
170 Ga0453684_0054503 3300044712 Bacteria 5208
171 Ga0466971_0015823 3300044719 Bacteria 3322
172 Ga0466968_0035071 3300044735 Bacteria 2097
173 Ga0466970_0006541 3300044765 Bacteria 5827
174 Ga0466957_0002089 3300044842 Bacteria 10688
175 Ga0466960_0026108 3300044901 Bacteria 2650
176 Ga0466959_0011256 3300045049 Bacteria 6419
177 Ga0466958_0017720 3300045836 Bacteria 4123
178 Ga0466967_0155236 3300045976 Bacteria 2143
179 Ga0466967_0282969 3300045976 Bacteria 1591
180 Ga0495591_000006 3300046458 Bacteria 390570
181 Ga0495638_0005186 3300046460 Bacteria 9744
182 Ga0495653_0002001 3300046463 Bacteria 16035
183 Ga0495650_0045111 3300046471 Bacteria 1858
184 Ga0495585_0022025 3300046492 Bacteria 3658
185 Ga0495607_0000260 3300046501 Bacteria 56403
186 Ga0495583_0000153 3300046506 Bacteria 115755
187 Ga0495606_0002284 3300046507 Bacteria 22667
188 Ga0495610_0004062 3300046512 Bacteria 10983
189 Ga0495616_0000367 3300046513 Bacteria 35276
190 Ga0495648_0004364 3300046524 Bacteria 12108
191 Ga0495654_0000013 3300046530 Bacteria 327576
192 Ga0495654_0000174 3300046530 Bacteria 63400
193 Ga0495654_0009262 3300046530 Bacteria 5400
194 Ga0495668_0010653 3300046616 Bacteria 5556
195 Ga0495668_0047910 3300046616 Bacteria 2372
196 Ga0495625_0001586 3300046660 Bacteria 26961
197 Ga0495625_0018150 3300046660 Bacteria 5499
198 Ga0495671_0000377 3300046692 Bacteria 36641
199 Ga0495671_0000482 3300046692 Bacteria 30969
200 Ga0495649_0000338 3300046694 Bacteria 40275
201 Ga0495589_0014634 3300046794 Bacteria 4037
202 Ga0495660_0001163 3300046810 Bacteria 18696
203 Ga0495660_0045181 3300046810 Bacteria 2419
204 Ga0495686_0000404 3300047472 Bacteria 68315
205 Ga0496101_0000041 3300048904 Bacteria 163231
206 Ga0496109_0129457 3300048912 Bacteria 2355
207 Ga0496110_0065456 3300048913 Unclassified 3213
208 Ga0496116_0022176 3300048919 Bacteria 4767
209 Ga0496119_0012091 3300048922 Bacteria 7052
210 Ga0496120_0005483 3300048923 Bacteria 10099
211 Ga0496121_0014722 3300048924 Bacteria 8267
212 Ga0496122_0033643 3300048925 Bacteria 4211
213 Ga0496123_0020520 3300048926 Bacteria 5165
214 Ga0496124_0000079 3300048927 Bacteria 212057
215 Ga0496124_0015057 3300048927 Bacteria 7437
216 Ga0496125_0003390 3300048928 Bacteria 19385
217 Ga0501309_000051 3300049129 Bacteria 5928
218 Ga0501310_000180 3300049130 Bacteria 6181
219 Ga0501291_000925 3300049514 Bacteria 3355
220 Ga0501312_004569 3300049528 Bacteria 1639
221 Ga0501211_001232 3300049658 Bacteria 2731
222 Ga0501235_002212 3300049669 Bacteria 4183
223 Ga0501225_0015223 3300049705 Bacteria 2144
224 Ga0501229_000426 3300049706 Bacteria 4751
225 Ga0501262_003537 3300049759 Bacteria 1793
226 Ga0501264_001939 3300049761 Bacteria 2012
227 nmdc:mga03n38_84272_c1 3300050490 Bacteria 1500
228 nmdc:mga00v17_74677_c1 3300050491 Bacteria 2107
229 nmdc:mga0k408_107250_c1 3300050493 Bacteria 1650
230 nmdc:mga07m45_1755_c1 3300050496 Bacteria 9994
231 nmdc:mga07m45_44720_c1 3300050496 Bacteria 2485
232 Ga0500635_0000033 3300053080 Bacteria 97175
233 Ga0500578_0000426 3300053086 Bacteria 51524
234 Ga0500578_0101232 3300053086 Bacteria 1823
235 Ga0500651_0032711 3300053093 Bacteria 3278
236 Ga0500593_000622 3300053117 Bacteria 13637
237 Ga0500608_025090 3300053122 Bacteria 2788
238 Ga0500628_002990 3300053129 Bacteria 2779
239 Ga0500642_0004196 3300053130 Bacteria 4473
240 Ga0500652_000089 3300053131 Bacteria 38735
241 Ga0500586_000311 3300053145 Bacteria 9701
242 Ga0500604_0042402 3300053151 Bacteria 1379
243 Ga0500619_000515 3300053154 Bacteria 6704
244 Ga0500622_0000257 3300053156 Bacteria 54054
245 Ga0500636_0012272 3300053177 Bacteria 5020
246 Ga0500587_007619 3300053739 Bacteria 1406
247 Ga0466962_0002723 3300061719 Bacteria 8395

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300050491 nmdc:mga00v17_74677_c1 nmdc:mga00v17_74677_c1_23_1087 352
2 3300042876 Ga0451577_0173053 Ga0451577_0173053_287_1513 372
3 3300046810 Ga0495660_0001163 Ga0495660_0001163_6163_7410 375
4 3300003322 rootL2_10085506 rootL2_100855062 377
5 3300003323 rootH1_10077013 rootH1_100770133 377
6 3300003794 Ga0055531_10000203 Ga0055531_1000020322 378
7 3300025298 Ga0209050_1005754 Ga0209050_10057547 378
8 3300025304 Ga0209257_1000017 Ga0209257_1000017676 378
9 3300028794 Ga0307515_10167270 Ga0307515_101672702 378
10 3300005262 Ga0065165_1000283 Ga0065165_100028358 380
11 3300005614 Ga0068856_100040165 Ga0068856_1000401652 382
12 3300026078 Ga0207702_10029209 Ga0207702_100292092 382
13 3300037471 Ga0395905_0000678 Ga0395905_0000678_20176_21375 383
14 3300031649 Ga0307514_10009121 Ga0307514_100091213 387
15 3300045976 Ga0466967_0282969 Ga0466967_0282969_164_1414 387
16 3300046810 Ga0495660_0045181 Ga0495660_0045181_269_1558 388
17 3300031548 Ga0307408_100000030 Ga0307408_10000003045 389
18 3300041456 Ga0451795_1635534 Ga0451795_1635534_25_1221 389
19 3300049129 Ga0501309_000051 Ga0501309_000051_3524_4723 389
20 3300049130 Ga0501310_000180 Ga0501310_000180_362_1561 389
21 3300049514 Ga0501291_000925 Ga0501291_000925_1348_2547 389
22 3300049528 Ga0501312_004569 Ga0501312_004569_81_1280 389
23 3300049658 Ga0501211_001232 Ga0501211_001232_916_2115 389
24 3300049669 Ga0501235_002212 Ga0501235_002212_2579_3778 389
25 3300049705 Ga0501225_0015223 Ga0501225_0015223_579_1778 389
26 3300049706 Ga0501229_000426 Ga0501229_000426_1626_2825 389
27 3300049759 Ga0501262_003537 Ga0501262_003537_393_1592 389
28 3300049761 Ga0501264_001939 Ga0501264_001939_260_1459 389
29 iso_pu_bacteria 2643221585 2643936683 395
30 iso_pu_bacteria 2643221656 2644318582 395
31 iso_pu_bacteria 2738541337 2739058723 395
32 iso_pu_bacteria 2643221639 2644221495 396
33 iso_pu_bacteria 2643221646 2644257741 396
34 3300003316 rootH1_10010320 rootH1_100103209 398
35 3300003322 rootL2_10004649 rootL2_100046493 398
36 3300003323 rootH1_10106404 rootH1_101064042 398
37 3300042000 Ga0439437_000436 Ga0439437_000436_1597_2796 398
38 3300042118 Ga0450914_000724 Ga0450914_000724_207_1406 398
39 3300042120 Ga0450917_000023 Ga0450917_000023_2231_3430 398
40 3300042127 Ga0450890_000111 Ga0450890_000111_3934_5133 398
41 3300042129 Ga0450891_000384 Ga0450891_000384_2254_3453 398
42 3300042130 Ga0450892_000366 Ga0450892_000366_2702_3901 398
43 3300044712 Ga0453684_0054503 Ga0453684_0054503_2706_3905 398
44 3300048912 Ga0496109_0129457 Ga0496109_0129457_27_1268 398
45 3300050493 nmdc:mga0k408_107250_c1 nmdc:mga0k408_107250_c1_70_1269 398
46 3300035091 Ga0373951_0004455 Ga0373951_0004455_1891_3093 399
47 3300035114 Ga0373939_0000302 Ga0373939_0000302_10051_11253 399
48 3300035691 Ga0373931_0000150 Ga0373931_0000150_11506_12708 399
49 3300050496 nmdc:mga07m45_1755_c1 nmdc:mga07m45_1755_c1_1957_3159 399
50 3300050496 nmdc:mga07m45_44720_c1 nmdc:mga07m45_44720_c1_678_1880 399
51 3300021361 Ga0213872_10009395 Ga0213872_100093952 400
52 3300039447 Ga0436361_0725841 Ga0436361_0725841_6179_7387 400
53 3300048913 Ga0496110_0065456 Ga0496110_0065456_1656_2888 401
54 3300044901 Ga0466960_0026108 Ga0466960_0026108_1181_2437 402
55 iso_pu_bacteria 2585428057 2587726295 403
56 iso_pu_bacteria 2585428062 2587756467 403
57 iso_pu_bacteria 8015687852 8015691911 403
58 3300047472 Ga0495686_0000404 Ga0495686_0000404_14629_15870 404
59 iso_pu_bacteria 2511231025 2511381460 404
60 iso_pu_bacteria 2585428058 2587734470 404
61 iso_pu_bacteria 2588253510 2588293827 404
62 iso_pu_bacteria 2643221592 2643970912 404
63 iso_pu_bacteria 2643221625 2644138833 404
64 iso_pu_bacteria 2643221648 2644273931 404
65 iso_pu_bacteria 2876601092 2876605288 404
66 iso_pu_bacteria 8019499862 8019504666 404
67 3300042876 Ga0451577_0001771 Ga0451577_0001771_15761_16984 405
68 3300048904 Ga0496101_0000041 Ga0496101_0000041_134766_135995 405
69 3300048919 Ga0496116_0022176 Ga0496116_0022176_871_2100 405
70 3300048922 Ga0496119_0012091 Ga0496119_0012091_3137_4366 405
71 3300048923 Ga0496120_0005483 Ga0496120_0005483_7477_8706 405
72 3300048925 Ga0496122_0033643 Ga0496122_0033643_2323_3552 405
73 3300048926 Ga0496123_0020520 Ga0496123_0020520_1613_2842 405
74 3300048927 Ga0496124_0015057 Ga0496124_0015057_1538_2767 405
75 iso_pu_bacteria 2511231025 2511379168 405
76 iso_pu_bacteria 2511231035 2511435414 405
77 iso_pu_bacteria 2876601092 2876602359 405
78 iso_pu_bacteria 3007861166 3007862710 405
79 iso_pu_bacteria 8016733728 8016734323 405
80 iso_pu_bacteria 8019499862 8019503340 405
81 iso_pu_bacteria 8054347763 8054350516 405
82 3300013102 Ga0157371_10000389 Ga0157371_1000038932 406
83 3300028794 Ga0307515_10000011 Ga0307515_10000011483 406
84 3300028794 Ga0307515_10000842 Ga0307515_1000084215 406
85 3300031616 Ga0307508_10000333 Ga0307508_1000033349 406
86 3300031649 Ga0307514_10053720 Ga0307514_100537202 406
87 iso_pu_bacteria 2511231035 2511437086 406
88 3300028794 Ga0307515_10002513 Ga0307515_1000251325 407
89 3300028794 Ga0307515_10012271 Ga0307515_100122718 407
90 3300030522 Ga0307512_10081051 Ga0307512_100810512 407
91 3300031456 Ga0307513_10041837 Ga0307513_100418375 407
92 3300031456 Ga0307513_10140635 Ga0307513_101406351 407
93 3300031730 Ga0307516_10044603 Ga0307516_100446032 407
94 3300033179 Ga0307507_10063485 Ga0307507_100634852 407
95 3300041443 Ga0451789_1174228 Ga0451789_1174228_91_1314 407
96 3300041443 Ga0451789_1340901 Ga0451789_1340901_119_1342 407
97 3300041459 Ga0451800_0504098 Ga0451800_0504098_116_1339 407
98 3300046660 Ga0495625_0001586 Ga0495625_0001586_25190_26413 407
99 3300053093 Ga0500651_0032711 Ga0500651_0032711_1643_2866 407
100 3300053129 Ga0500628_002990 Ga0500628_002990_69_1292 407
101 3300053131 Ga0500652_000089 Ga0500652_000089_8752_9975 407
102 3300053151 Ga0500604_0042402 Ga0500604_0042402_91_1314 407
103 3300053156 Ga0500622_0000257 Ga0500622_0000257_20180_21403 407
104 3300053739 Ga0500587_007619 Ga0500587_007619_122_1345 407
105 iso_pu_bacteria 2597489888 2597865377 407
106 3300002773 JGI25152J39213_1000361 JGI25152J39213_10003617 408
107 3300003215 JGI25153J46596_10000753 JGI25153J46596_1000075313 408
108 3300003215 JGI25153J46596_10006895 JGI25153J46596_100068953 408
109 3300003323 rootH1_10240293 rootH1_102402932 408
110 3300003771 Ga0055526_1000848 Ga0055526_10008483 408
111 3300005262 Ga0065165_1001215 Ga0065165_100121517 408
112 3300006195 Ga0075366_10087362 Ga0075366_100873621 408
113 3300006353 Ga0075370_10009704 Ga0075370_100097041 408
114 3300025245 Ga0207425_1000410 Ga0207425_100041010 408
115 3300025258 Ga0209129_1000144 Ga0209129_100014490 408
116 3300025273 Ga0209673_1022259 Ga0209673_10222591 408
117 3300025295 Ga0209564_1000029 Ga0209564_1000029134 408
118 3300025297 Ga0209758_1000043 Ga0209758_1000043306 408
119 3300025297 Ga0209758_1000434 Ga0209758_100043448 408
120 3300025298 Ga0209050_1000197 Ga0209050_1000197126 408
121 3300025303 Ga0209051_1000674 Ga0209051_100067423 408
122 3300025303 Ga0209051_1012756 Ga0209051_10127563 408
123 3300025304 Ga0209257_1020687 Ga0209257_10206873 408
124 3300027876 Ga0209974_10003188 Ga0209974_100031882 408
125 3300031239 Ga0265328_10015282 Ga0265328_100152822 408
126 3300031251 Ga0265327_10002230 Ga0265327_100022305 408
127 3300031456 Ga0307513_10038720 Ga0307513_100387204 408
128 3300032005 Ga0307411_10029821 Ga0307411_100298212 408
129 3300037471 Ga0395905_0054368 Ga0395905_0054368_2461_3696 408
130 3300041463 Ga0451804_0069164 Ga0451804_0069164_76_1302 408
131 3300050490 nmdc:mga03n38_84272_c1 nmdc:mga03n38_84272_c1_125_1351 408
132 3300053086 Ga0500578_0000426 Ga0500578_0000426_45090_46316 408
133 3300003856 Ga0058692_1000112 Ga0058692_10001126 409
134 3300003856 Ga0058692_1006906 Ga0058692_10069062 409
135 3300009011 Ga0105251_10007191 Ga0105251_100071912 409
136 3300009036 Ga0105244_10000720 Ga0105244_100007204 409
137 3300009036 Ga0105244_10001972 Ga0105244_100019722 409
138 3300009036 Ga0105244_10014181 Ga0105244_100141813 409
139 3300009092 Ga0105250_10016053 Ga0105250_100160532 409
140 3300011119 Ga0105246_10027859 Ga0105246_100278592 409
141 3300013100 Ga0157373_10000508 Ga0157373_1000050818 409
142 3300013102 Ga0157371_10000203 Ga0157371_1000020350 409
143 3300013102 Ga0157371_10001221 Ga0157371_1000122117 409
144 3300013102 Ga0157371_10003451 Ga0157371_100034514 409
145 3300013307 Ga0157372_10122901 Ga0157372_101229012 409
146 3300013308 Ga0157375_10000480 Ga0157375_1000048010 409
147 3300025711 Ga0207696_1000048 Ga0207696_1000048134 409
148 3300025728 Ga0207655_1002204 Ga0207655_100220410 409
149 3300025728 Ga0207655_1008634 Ga0207655_10086344 409
150 3300025728 Ga0207655_1012161 Ga0207655_10121612 409
151 3300025728 Ga0207655_1032149 Ga0207655_10321492 409
152 3300025735 Ga0207713_1016438 Ga0207713_10164382 409
153 3300027312 Ga0209371_1000062 Ga0209371_1000062132 409
154 3300027312 Ga0209371_1004550 Ga0209371_10045502 409
155 3300030500 Ga0268256_1000088 Ga0268256_1000088138 409
156 3300030500 Ga0268256_1003589 Ga0268256_10035895 409
157 3300031507 Ga0307509_10132026 Ga0307509_101320262 409
158 3300032002 Ga0307416_100185060 Ga0307416_1001850602 409
159 3300035691 Ga0373931_0035830 Ga0373931_0035830_401_1648 409
160 3300041405 Ga0439438_000036 Ga0439438_000036_37798_39039 409
161 3300041407 Ga0439447_003902 Ga0439447_003902_563_1804 409
162 3300042006 Ga0439432_000944 Ga0439432_000944_556_1797 409
163 3300046492 Ga0495585_0022025 Ga0495585_0022025_2219_3466 409
164 3300046512 Ga0495610_0004062 Ga0495610_0004062_4562_5803 409
165 3300046513 Ga0495616_0000367 Ga0495616_0000367_8826_10067 409
166 3300046524 Ga0495648_0004364 Ga0495648_0004364_6406_7647 409
167 3300046530 Ga0495654_0000174 Ga0495654_0000174_38583_39824 409
168 3300046616 Ga0495668_0047910 Ga0495668_0047910_88_1329 409
169 3300046692 Ga0495671_0000482 Ga0495671_0000482_7326_8567 409
170 3300053145 Ga0500586_000311 Ga0500586_000311_6445_7686 409
171 3300003761 Ga0055535_1001019 Ga0055535_10010196 410
172 3300003763 Ga0055529_1000175 Ga0055529_10001756 410
173 3300015265 Ga0182005_1000390 Ga0182005_10003904 410
174 3300025242 Ga0209258_100060 Ga0209258_100060211 410
175 3300025256 Ga0209759_1005836 Ga0209759_10058361 410
176 3300025272 Ga0209455_1000093 Ga0209455_100009327 410
177 3300025921 Ga0207652_10177759 Ga0207652_101777591 410
178 3300031731 Ga0307405_10026056 Ga0307405_100260562 410
179 3300044656 Ga0466969_0004405 Ga0466969_0004405_6029_7285 410
180 3300044684 Ga0466966_0001100 Ga0466966_0001100_4854_6110 410
181 3300044693 Ga0466961_0025833 Ga0466961_0025833_2198_3454 410
182 3300044694 Ga0466963_0174116 Ga0466963_0174116_142_1398 410
183 3300044719 Ga0466971_0015823 Ga0466971_0015823_1894_3150 410
184 3300044735 Ga0466968_0035071 Ga0466968_0035071_123_1379 410
185 3300044765 Ga0466970_0006541 Ga0466970_0006541_4351_5607 410
186 3300044842 Ga0466957_0002089 Ga0466957_0002089_2244_3500 410
187 3300045049 Ga0466959_0011256 Ga0466959_0011256_2947_4203 410
188 3300045836 Ga0466958_0017720 Ga0466958_0017720_240_1496 410
189 3300045976 Ga0466967_0155236 Ga0466967_0155236_248_1504 410
190 3300046458 Ga0495591_000006 Ga0495591_000006_191858_193102 410
191 3300046460 Ga0495638_0005186 Ga0495638_0005186_7382_8626 410
192 3300046501 Ga0495607_0000260 Ga0495607_0000260_38419_39663 410
193 3300046530 Ga0495654_0000013 Ga0495654_0000013_241051_242295 410
194 3300046530 Ga0495654_0009262 Ga0495654_0009262_2091_3335 410
195 3300046616 Ga0495668_0010653 Ga0495668_0010653_2753_3997 410
196 3300046692 Ga0495671_0000377 Ga0495671_0000377_6433_7677 410
197 3300061719 Ga0466962_0002723 Ga0466962_0002723_4350_5606 410
198 3300002705 JGI25156J39149_1000326 JGI25156J39149_10003264 411
199 3300002738 JGI25154J39366_1000354 JGI25154J39366_100035415 411
200 3300002741 JGI25157J39369_1000163 JGI25157J39369_100016315 411
201 3300003320 rootH2_10058548 rootH2_100585482 411
202 3300003323 rootH1_10034297 rootH1_100342973 411
203 3300003752 Ga0055539_1000886 Ga0055539_10008864 411
204 3300003752 Ga0055539_1001763 Ga0055539_10017632 411
205 3300003756 Ga0055533_1000006 Ga0055533_100000636 411
206 3300005327 Ga0070658_10177753 Ga0070658_101777532 411
207 3300005330 Ga0070690_100013245 Ga0070690_1000132452 411
208 3300005339 Ga0070660_100186872 Ga0070660_1001868722 411
209 3300005364 Ga0070673_100005304 Ga0070673_1000053043 411
210 3300005539 Ga0068853_100082857 Ga0068853_1000828572 411
211 3300005563 Ga0068855_100121470 Ga0068855_1001214702 411
212 3300005577 Ga0068857_100099598 Ga0068857_1000995982 411
213 3300005578 Ga0068854_100004327 Ga0068854_1000043275 411
214 3300005614 Ga0068856_100001213 Ga0068856_10000121323 411
215 3300005616 Ga0068852_100033410 Ga0068852_1000334102 411
216 3300005719 Ga0068861_100040046 Ga0068861_1000400462 411
217 3300009176 Ga0105242_10110402 Ga0105242_101104022 411
218 3300009545 Ga0105237_10078628 Ga0105237_100786283 411
219 3300009551 Ga0105238_10237051 Ga0105238_102370511 411
220 3300013105 Ga0157369_10228376 Ga0157369_102283762 411
221 3300013307 Ga0157372_10055217 Ga0157372_100552172 411
222 3300025226 Ga0209674_100003 Ga0209674_1000031300 411
223 3300025230 Ga0209563_100010 Ga0209563_1000101028 411
224 3300025231 Ga0207427_100877 Ga0207427_1008777 411
225 3300025242 Ga0209258_100437 Ga0209258_10043722 411
226 3300025246 Ga0209646_1000242 Ga0209646_100024214 411
227 3300025250 Ga0209026_1000311 Ga0209026_100031114 411
228 3300025253 Ga0209677_100274 Ga0209677_10027430 411
229 3300025253 Ga0209677_100396 Ga0209677_10039624 411
230 3300025253 Ga0209677_101726 Ga0209677_1017264 411
231 3300025256 Ga0209759_1000373 Ga0209759_100037328 411
232 3300025256 Ga0209759_1000818 Ga0209759_10008189 411
233 3300025909 Ga0207705_10035278 Ga0207705_100352783 411
234 3300025934 Ga0207686_10056986 Ga0207686_100569862 411
235 3300025942 Ga0207689_10050962 Ga0207689_100509622 411
236 3300025949 Ga0207667_10076003 Ga0207667_100760032 411
237 3300025949 Ga0207667_10167775 Ga0207667_101677752 411
238 3300025960 Ga0207651_10000345 Ga0207651_100003459 411
239 3300025981 Ga0207640_10001287 Ga0207640_100012875 411
240 3300026041 Ga0207639_10038195 Ga0207639_100381952 411
241 3300026041 Ga0207639_10116533 Ga0207639_101165332 411
242 3300026078 Ga0207702_10001598 Ga0207702_100015982 411
243 3300026089 Ga0207648_10240947 Ga0207648_102409472 411
244 3300026118 Ga0207675_100056399 Ga0207675_1000563992 411
245 3300028786 Ga0307517_10037350 Ga0307517_100373504 411
246 3300029957 Ga0265324_10001776 Ga0265324_100017763 411
247 3300031730 Ga0307516_10036821 Ga0307516_100368213 411
248 3300031730 Ga0307516_10040033 Ga0307516_100400332 411
249 3300037466 Ga0395898_0027863 Ga0395898_0027863_314_1597 411
250 3300038443 Ga0395901_0006809 Ga0395901_0006809_9403_10686 411
251 3300041459 Ga0451800_1105758 Ga0451800_1105758_597_1844 411
252 3300046463 Ga0495653_0002001 Ga0495653_0002001_9446_10696 411
253 3300046471 Ga0495650_0045111 Ga0495650_0045111_444_1706 411
254 3300046506 Ga0495583_0000153 Ga0495583_0000153_58685_59956 411
255 3300046507 Ga0495606_0002284 Ga0495606_0002284_13485_14756 411
256 3300046660 Ga0495625_0018150 Ga0495625_0018150_2324_3595 411
257 3300046694 Ga0495649_0000338 Ga0495649_0000338_24990_26261 411
258 3300046794 Ga0495589_0014634 Ga0495589_0014634_867_2138 411
259 3300053080 Ga0500635_0000033 Ga0500635_0000033_28568_29854 411
260 3300053086 Ga0500578_0101232 Ga0500578_0101232_454_1725 411
261 3300053122 Ga0500608_025090 Ga0500608_025090_846_2117 411
262 3300053177 Ga0500636_0012272 Ga0500636_0012272_3617_4888 411
263 3300028381 Ga0268264_10099649 Ga0268264_100996492 412
264 3300048924 Ga0496121_0014722 Ga0496121_0014722_4666_5916 412
265 3300048927 Ga0496124_0000079 Ga0496124_0000079_205385_206635 412
266 3300048928 Ga0496125_0003390 Ga0496125_0003390_12514_13764 412
267 3300053117 Ga0500593_000622 Ga0500593_000622_7582_8826 414
268 3300053154 Ga0500619_000515 Ga0500619_000515_631_1884 417
269 3300053130 Ga0500642_0004196 Ga0500642_0004196_147_1502 422
270 3300001979 JGI24740J21852_10002999 JGI24740J21852_100029993 426
271 3300005563 Ga0068855_100108336 Ga0068855_1001083362 426
272 3300025949 Ga0207667_10105306 Ga0207667_101053062 426

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13533

Biotin_lipoyl_2

Biotin-lipoyl like

115

162

0.91

PF00529

CusB_dom_1

Cation efflux system protein CusB domain 1

87

428

0.88

PF16576

HlyD_D23

Barrel-sandwich domain of CusB or HlyD membrane-fusion

99

390

0.83

PF13437

HlyD_3

HlyD family secretion protein

298

419

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
2d5d-assembly1.cif.gz_A structure of biotin carboxyl carrier protein (74val start) from pyrococcus horikoshi ot3 ligand free form ii 0.9369 93 122
5gua-assembly1.cif.gz_A structure of biotin carboxyl carrier protein from pyrococcus horikoshi ot3 (delta n79) a138y mutant 0.9343 90 122
5gu9-assembly1.cif.gz_A structure of biotin carboxyl carrier protein from pyrococcus horikoshi ot3 (delta n79) a138i mutant 0.9282 93 123
5ks8-assembly1.cif.gz_F crystal structure of two-subunit pyruvate carboxylase from methylobacillus flagellatus 0.9245 93 123
5ks8-assembly1.cif.gz_D crystal structure of two-subunit pyruvate carboxylase from methylobacillus flagellatus 0.9179 93 123
ID Description Score Start End Superfamily
af_Q54KE6_633_699_2.40.50.100 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.9619 94 123 2.40.50.100
af_Q91ZA3_659_724_2.40.50.100 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.953 95 123 2.40.50.100
3n6rA04 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.9526 92 122 2.40.50.100
af_Q9V9T5_626_691_2.40.50.100 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.9507 94 123 2.40.50.100
af_P9WPQ1_4_71_2.40.50.100 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.9433 96 123 2.40.50.100
ID Description Score Start End GO Terms
AF-A0A378BDQ3-F1-model_v4 HlyD family secretion protein 0.838 86 307
AF-A0A378BDQ3-F1-model_v4 HlyD family secretion protein 0.8216 86 307
AF-A0A2X2RPZ0-F1-model_v4 deleted 0.7529 25 289
AF-A0A227NFS0-F1-model_v4 Secretion protein HlyD 0.7351 55 426 GO:0016020
AF-A0A227NFS0-F1-model_v4 Secretion protein HlyD 0.7298 55 426 GO:0016020

Feature Viewer

pLDDT pTM Quality
84.08 0.57 Medium
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Predicted Structure (AlphaFold2)

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