F378257

General Info

Members Datasets Scaffolds Average Seq Length
272 220 253 358

Family's Representative Sequence

Representative Sequence 3300006038|Ga0075365_10051705|Ga0075365_100517052
Length 419
Sequence MLFPHFGREPEASRERAALERPRTAGATARRDALRAVRPIDFCTSFVLMGASADKRRTVPVQRTIEGVHLSDEQRLDWLRLIRSDNVGPRTFRMLVNHYGGARRALAALPDLARRGGASGPARICSRQDAERELDATRSLGVALVALGEPDYPRRLQMIDDAPPLLAVRGSPAVFGRPIVAIVGARNASAAGIRFAERLHRGSLASGTIAVLAGGQDRIYPREHADLAEAVAAEGALISEMPLGWEPRARDFPRRNRLVSGLAVGIVVVEAARRSGSLITARFALEQGREVFAVPGSPLDPRAEGSNDLLKQGATLVTEAADVITVVRPILGAPVEAAVAEPDAPPLPASDPDGGERAGIVALLGPTPVPIDDLIRLSGSSPATVQVVLLELELAGRLERHGGALVSLAMHPAGRPLAS

Samples

Sample ID Description Type Environment
1 2513237098 Bradyrhizobium elkanii WSM2783 Isolate Nodule
2 2513237141 Bradyrhizobium sp. TV2a.2 Isolate Nodule
3 2517572143 Bradyrhizobium elkanii USDA 76 Isolate Nodule
4 2524023210 Bradyrhizobium sp. Ai1a-2 Isolate Nodule
5 2524023228 Bradyrhizobium sp. Th.b2 Isolate Nodule
6 2524023250 Niveispirillum irakense DSM 11586 Isolate Unclassified
7 2885374607 Bradyrhizobium sp. NAS96.2 Isolate Unclassified
8 2885383462 Bradyrhizobium sp. Leo170 Isolate Unclassified
9 2903768456 Bradyrhizobium sp. Leo121 Isolate Unclassified
10 2904690495 Bradyrhizobium ivorense CI-1B Isolate Nodule
11 2906635258 Bradyrhizobium sp. USDA 3458 Isolate Unclassified
12 2906660503 Bradyrhizobium brasilense UFLA 03-321 Isolate Unclassified
13 2908739725 Bradyrhizobium sp. UFLA03-84 Isolate Nodule
14 2908756301 Bradyrhizobium ivorense CI-41S Isolate Nodule
15 2996336353 Mesorhizobium sp. YM1C-6-2 Isolate Unclassified
16 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
17 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
18 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
19 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
20 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
21 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
22 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
23 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
24 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
25 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
26 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
27 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
28 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
29 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
30 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
31 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
32 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
33 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
34 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
35 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
36 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
37 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
38 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
39 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
40 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
41 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
42 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
43 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
44 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
45 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
46 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
47 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
48 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
49 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
50 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
51 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
52 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
53 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
54 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
55 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
56 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
57 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
58 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
59 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
60 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
61 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
62 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
63 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
64 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
65 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
66 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
67 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
68 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
69 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
70 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
71 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
72 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
73 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
74 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
75 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
76 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
77 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
78 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
79 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
80 3300025271 Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
110 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
111 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
112 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
113 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
115 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
116 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
117 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
118 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
119 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
120 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
121 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
122 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
123 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
124 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
125 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
126 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
127 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
128 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
129 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
130 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
131 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
132 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
133 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
134 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
135 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
136 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
137 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
138 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
139 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
140 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
141 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
142 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
143 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
144 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
145 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
146 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
147 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
148 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
149 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
150 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
151 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
152 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
153 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
154 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
155 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
156 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
157 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
158 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
159 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
160 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
161 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
162 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
163 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
164 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
165 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
166 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
167 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
168 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
169 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
170 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
171 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
172 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
173 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
174 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
175 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
176 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
177 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
178 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
179 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
180 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
181 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
182 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
183 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
184 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
185 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
186 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
187 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
188 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
189 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
190 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
191 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
192 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
193 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
194 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
195 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
196 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
197 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
198 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
199 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
200 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
201 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
202 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
203 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
204 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
205 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
206 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
207 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
208 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
209 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
210 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
211 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
212 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
213 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
214 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
215 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
216 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
217 8006933436 Bradyrhizobium septentrionale 7(2017) Isolate Unclassified
218 8006973647 Bradyrhizobium septentrionale 162S2 Isolate Nodule
219 8056681323 Bradyrhizobium cenepequi CNPSo 4026 Isolate Nodule
220 8056689827 Bradyrhizobium semiaridum WSM 1704 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 93.01
Metatranscriptomes 0
Isolates 6.99

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.29
Nodule 4.04
Rhizoplane 9.19
Rhizosphere 71.69
Stem 0
Stem Tuber 0
Unclassified 4.78

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24751J29686_10026261 3300002459 Bacteria 1208
2 Ga0065712_10090507 3300005290 Bacteria 2418
3 Ga0065707_10119681 3300005295 Bacteria 2153
4 Ga0070676_10101366 3300005328 Bacteria 1779
5 Ga0070670_100018981 3300005331 Bacteria 5897
6 Ga0070680_100017952 3300005336 Bacteria 5586
7 Ga0070680_100066615 3300005336 Bacteria 2953
8 Ga0070680_100238995 3300005336 Bacteria 1535
9 Ga0070682_100044961 3300005337 Bacteria 2735
10 Ga0068868_100000287 3300005338 Bacteria 33828
11 Ga0068868_100045528 3300005338 Bacteria 3432
12 Ga0068868_100096912 3300005338 Bacteria 2383
13 Ga0070660_100062174 3300005339 Bacteria 2900
14 Ga0070689_100018095 3300005340 Bacteria 5184
15 Ga0070692_10010746 3300005345 Bacteria 4180
16 Ga0070668_100001169 3300005347 Bacteria 18553
17 Ga0070668_100195521 3300005347 Bacteria 1658
18 Ga0070675_100049831 3300005354 Bacteria 3438
19 Ga0070671_100125989 3300005355 Bacteria 2156
20 Ga0070673_100000191 3300005364 Bacteria 30135
21 Ga0070688_100086694 3300005365 Bacteria 2037
22 Ga0070659_100226884 3300005366 Bacteria 1543
23 Ga0070667_100032349 3300005367 Bacteria 4362
24 Ga0070713_100010983 3300005436 Bacteria 6569
25 Ga0070711_100008995 3300005439 Bacteria 6131
26 Ga0070711_100140035 3300005439 Bacteria 1813
27 Ga0070694_100128471 3300005444 Bacteria 1828
28 Ga0070678_100271934 3300005456 Bacteria 1429
29 Ga0070684_100230596 3300005535 Bacteria 1691
30 Ga0070684_100353069 3300005535 Bacteria 1353
31 Ga0068853_100100126 3300005539 Bacteria 2561
32 Ga0070686_100001852 3300005544 Bacteria 11801
33 Ga0070693_100003405 3300005547 Bacteria 7408
34 Ga0070693_100108432 3300005547 Bacteria 1704
35 Ga0068855_100136856 3300005563 Bacteria 2794
36 Ga0070664_100097137 3300005564 Bacteria 2557
37 Ga0068854_100112874 3300005578 Bacteria 2052
38 Ga0068856_100071204 3300005614 Bacteria 3441
39 Ga0068856_100228686 3300005614 Bacteria 1875
40 Ga0070702_100002122 3300005615 Bacteria 8421
41 Ga0068859_100002296 3300005617 Bacteria 19413
42 Ga0068866_10002715 3300005718 Bacteria 7301
43 Ga0068861_100177774 3300005719 Bacteria 1769
44 Ga0068870_10023790 3300005840 Bacteria 3025
45 Ga0068863_100229392 3300005841 Bacteria 1791
46 Ga0068858_100047364 3300005842 Bacteria 3985
47 Ga0068858_100055131 3300005842 Bacteria 3674
48 Ga0068858_100184454 3300005842 Bacteria 1971
49 Ga0068858_100189370 3300005842 Bacteria 1944
50 Ga0068860_100011366 3300005843 Bacteria 8773
51 Ga0081455_10000009 3300005937 Bacteria 249885
52 Ga0081455_10004176 3300005937 Bacteria 16283
53 Ga0081455_10015330 3300005937 Bacteria 7452
54 Ga0081538_10001263 3300005981 Bacteria 26406
55 Ga0075365_10002226 3300006038 Bacteria 9378
56 Ga0075365_10034820 3300006038 Bacteria 3254
57 Ga0075365_10051705 3300006038 Bacteria 2715
58 Ga0075365_10099261 3300006038 Bacteria 1992
59 Ga0075365_10112543 3300006038 Bacteria 1872
60 Ga0075368_10026752 3300006042 Bacteria 2220
61 Ga0075363_100029233 3300006048 Bacteria 2843
62 Ga0075364_10016489 3300006051 Bacteria 4597
63 Ga0075364_10071641 3300006051 Bacteria 2283
64 Ga0070712_100115187 3300006175 Bacteria 2014
65 Ga0075369_10040780 3300006186 Bacteria 1985
66 Ga0075370_10017678 3300006353 Bacteria 3855
67 Ga0068871_100045370 3300006358 Bacteria 3538
68 Ga0075428_100009524 3300006844 Bacteria 10786
69 Ga0075428_100119637 3300006844 Bacteria 2867
70 Ga0068865_100053184 3300006881 Bacteria 2809
71 Ga0097620_100002296 3300006931 Bacteria 19413
72 Ga0099795_10000155 3300007788 Bacteria 11496
73 Ga0105240_10129758 3300009093 Bacteria 3025
74 Ga0111539_10003401 3300009094 Bacteria 20957
75 Ga0111539_10022902 3300009094 Bacteria 7670
76 Ga0114129_10018793 3300009147 Bacteria 9844
77 Ga0105243_10045048 3300009148 Bacteria 3465
78 Ga0105241_10003767 3300009174 Bacteria 11245
79 Ga0105248_10083940 3300009177 Bacteria 3583
80 Ga0105249_10025232 3300009553 Bacteria 5348
81 Ga0099796_10000545 3300010159 Bacteria 6436
82 Ga0105246_10027136 3300011119 Bacteria 3749
83 Ga0157375_10039024 3300013308 Bacteria 4565
84 Ga0157377_10024270 3300014745 Bacteria 3222
85 Ga0157377_10026019 3300014745 Bacteria 3126
86 Ga0157379_10014568 3300014968 Bacteria 6897
87 Ga0207666_1003103 3300025271 Bacteria 2025
88 Ga0207653_10003139 3300025885 Bacteria 5228
89 Ga0207653_10027516 3300025885 Bacteria 1826
90 Ga0207642_10000453 3300025899 Bacteria 12480
91 Ga0207688_10008788 3300025901 Bacteria 5496
92 Ga0207643_10000523 3300025908 Bacteria 24625
93 Ga0207643_10024632 3300025908 Bacteria 3321
94 Ga0207705_10048180 3300025909 Bacteria 3064
95 Ga0207654_10001610 3300025911 Bacteria 11830
96 Ga0207707_10001147 3300025912 Bacteria 25092
97 Ga0207663_10005264 3300025916 Bacteria 6514
98 Ga0207649_10109575 3300025920 Bacteria 1842
99 Ga0207652_10092880 3300025921 Bacteria 2655
100 Ga0207681_10090654 3300025923 Bacteria 2182
101 Ga0207694_10128409 3300025924 Bacteria 2030
102 Ga0207644_10201174 3300025931 Bacteria 1571
103 Ga0207690_10049570 3300025932 Bacteria 2800
104 Ga0207709_10009025 3300025935 Bacteria 5498
105 Ga0207665_10001692 3300025939 Bacteria 14821
106 Ga0207665_10073275 3300025939 Bacteria 2341
107 Ga0207711_10040516 3300025941 Bacteria 3963
108 Ga0207689_10073515 3300025942 Bacteria 2808
109 Ga0207677_10145260 3300026023 Bacteria 1822
110 Ga0207703_10368529 3300026035 Bacteria 1326
111 Ga0207708_10002721 3300026075 Bacteria 12989
112 Ga0207702_10003767 3300026078 Bacteria 13697
113 Ga0207702_10089597 3300026078 Bacteria 2690
114 Ga0207641_10467183 3300026088 Bacteria 1221
115 Ga0207648_10024588 3300026089 Bacteria 5374
116 Ga0207648_10082742 3300026089 Bacteria 2799
117 Ga0207648_10200866 3300026089 Bacteria 1768
118 Ga0207675_100181177 3300026118 Bacteria 2017
119 Ga0207675_100234421 3300026118 Bacteria 1772
120 Ga0207683_10000037 3300026121 Bacteria 100920
121 Ga0207698_10177372 3300026142 Bacteria 1883
122 Ga0209179_1000126 3300027512 Bacteria 8526
123 Ga0209971_1017778 3300027682 Bacteria 1685
124 Ga0209998_10001005 3300027717 Bacteria 7098
125 Ga0209974_10006247 3300027876 Bacteria 4167
126 Ga0207428_10000947 3300027907 Bacteria 32277
127 Ga0268264_10054175 3300028381 Bacteria 3349
128 Ga0265320_10000960 3300031240 Bacteria 21445
129 Ga0265325_10003453 3300031241 Bacteria 10312
130 Ga0265340_10071270 3300031247 Bacteria 1648
131 Ga0265313_10000438 3300031595 Bacteria 44285
132 Ga0265314_10027903 3300031711 Bacteria 4219
133 Ga0307416_100152695 3300032002 Bacteria 2121
134 Ga0373953_0049532 3300035117 Bacteria 1695
135 Ga0373954_0011780 3300035118 Bacteria 3881
136 Ga0373956_0100387 3300035119 Bacteria 1342
137 Ga0373955_0008707 3300035172 Bacteria 4723
138 Ga0373942_0004460 3300035207 Bacteria 3247
139 Ga0373961_0001449 3300035241 Bacteria 6985
140 Ga0373931_0068095 3300035691 Bacteria 1937
141 Ga0373947_0204188 3300035725 Bacteria 1294
142 Ga0373937_0098200 3300036401 Bacteria 2716
143 Ga0436364_0136711 3300037853 Bacteria 2792
144 Ga0395901_0238257 3300038443 Bacteria 1898
145 Ga0436360_0687479 3300039438 Bacteria 1880
146 Ga0439465_0058762 3300041413 Bacteria 1271
147 Ga0453684_0000020 3300044712 Bacteria 879938
148 Ga0453684_0022654 3300044712 Bacteria 9307
149 Ga0466970_0097362 3300044765 Bacteria 1601
150 Ga0451576_0023568 3300045051 Bacteria 6663
151 Ga0495592_0070753 3300046454 Bacteria 2540
152 Ga0495638_0038630 3300046460 Bacteria 3032
153 Ga0495651_0067157 3300046462 Bacteria 2736
154 Ga0495580_0245418 3300046472 Bacteria 1227
155 Ga0495664_0074190 3300046477 Bacteria 2035
156 Ga0495608_0055798 3300046511 Bacteria 2610
157 Ga0495628_0014081 3300046516 Bacteria 6713
158 Ga0495644_0072339 3300046523 Bacteria 1296
159 Ga0495652_0010378 3300046529 Bacteria 8442
160 Ga0495640_0087133 3300046533 Bacteria 2066
161 Ga0495587_0081263 3300046536 Bacteria 1878
162 Ga0495611_0027749 3300046648 Bacteria 2477
163 Ga0495635_0029945 3300046663 Bacteria 3784
164 Ga0495657_0039832 3300046675 Bacteria 3227
165 Ga0495599_0002940 3300046678 Bacteria 9906
166 Ga0495623_0029465 3300046679 Bacteria 3532
167 Ga0495669_0045395 3300046684 Bacteria 1959
168 Ga0495604_0215028 3300047317 Bacteria 1326
169 Ga0495681_0076209 3300047470 Bacteria 1508
170 Ga0495602_0009515 3300048088 Bacteria 10102
171 Ga0496100_0023288 3300048903 Bacteria 3760
172 Ga0496101_0059392 3300048904 Bacteria 2771
173 Ga0496102_0005977 3300048905 Bacteria 10367
174 Ga0496102_0385094 3300048905 Bacteria 1319
175 Ga0496104_0000196 3300048907 Bacteria 53901
176 Ga0496104_0096220 3300048907 Bacteria 2832
177 Ga0496105_0002714 3300048908 Bacteria 12911
178 Ga0496105_0011729 3300048908 Bacteria 6935
179 Ga0496106_0016377 3300048909 Bacteria 5485
180 Ga0496106_0080448 3300048909 Bacteria 2502
181 Ga0496106_0094473 3300048909 Bacteria 2312
182 Ga0496107_0001255 3300048910 Bacteria 15528
183 Ga0496107_0222245 3300048910 Bacteria 1405
184 Ga0496108_0013177 3300048911 Bacteria 6738
185 Ga0496109_0001302 3300048912 Bacteria 20645
186 Ga0496109_0048064 3300048912 Bacteria 3881
187 Ga0496110_0017147 3300048913 Bacteria 6054
188 Ga0496111_0008814 3300048914 Bacteria 6700
189 Ga0496111_0020509 3300048914 Bacteria 4602
190 Ga0496112_0004880 3300048915 Bacteria 11467
191 Ga0496112_0005955 3300048915 Bacteria 10636
192 Ga0496113_0000394 3300048916 Bacteria 21064
193 Ga0496113_0092856 3300048916 Bacteria 2328
194 Ga0496114_0018298 3300048917 Bacteria 5664
195 Ga0496115_0004440 3300048918 Bacteria 10168
196 Ga0496122_0060228 3300048925 Bacteria 2797
197 Ga0496126_0055592 3300048929 Bacteria 3580
198 Ga0496126_0076084 3300048929 Bacteria 2978
199 Ga0496126_0092883 3300048929 Bacteria 2650
200 Ga0501032_0024752 3300049569 Bacteria 4142
201 Ga0501034_0026169 3300049571 Bacteria 5940
202 Ga0501034_0049146 3300049571 Bacteria 4257
203 Ga0501034_0169757 3300049571 Bacteria 2149
204 Ga0501036_0000164 3300049572 Bacteria 43588
205 Ga0501037_0006302 3300049573 Bacteria 8676
206 Ga0501038_0101812 3300049574 Bacteria 2391
207 Ga0501041_0071911 3300049577 Bacteria 2124
208 Ga0501043_0001053 3300049579 Bacteria 24217
209 Ga0501047_0000218 3300049581 Bacteria 68952
210 Ga0501048_0000762 3300049582 Bacteria 23616
211 Ga0501068_0073708 3300049584 Bacteria 2086
212 Ga0501069_0091543 3300049585 Bacteria 1720
213 Ga0501070_0004965 3300049586 Bacteria 11351
214 Ga0501071_0111971 3300049587 Bacteria 2018
215 Ga0501072_0009156 3300049588 Bacteria 7522
216 Ga0501073_0057975 3300049589 Bacteria 2707
217 Ga0501073_0228173 3300049589 Bacteria 1286
218 Ga0501074_0005730 3300049590 Bacteria 8956
219 Ga0501076_0034739 3300049592 Bacteria 3943
220 Ga0501080_0000489 3300049742 Bacteria 30879
221 Ga0501083_0002238 3300049744 Bacteria 13225
222 Ga0501044_0000931 3300049823 Bacteria 35180
223 nmdc:mga03683_1837_c1 3300050489 Bacteria 6445
224 nmdc:mga00v17_95664_c1 3300050491 Bacteria 1870
225 nmdc:mga0yw44_41499_c1 3300050492 Bacteria 2739
226 nmdc:mga0yw44_50870_c1 3300050492 Bacteria 2507
227 nmdc:mga04h51_38449_c1 3300050495 Bacteria 1550
228 nmdc:mga04h51_81904_c1 3300050495 Bacteria 1147
229 nmdc:mga07m45_19801_c1 3300050496 Bacteria 3649
230 nmdc:mga05p37_111360_c1 3300050507 Bacteria 3367
231 nmdc:mga06r32_62349_c1 3300050510 Bacteria 3592
232 nmdc:mga0n895_274069_c1 3300050512 Bacteria 1711
233 nmdc:mga0rr50_19830_c1 3300050513 Bacteria 4549
234 nmdc:mga0rr50_29462_c1 3300050513 Bacteria 3872
235 nmdc:mga0sz30_47033_c1 3300050516 Bacteria 1823
236 Ga0495601_0081747 3300053077 Bacteria 2073
237 Ga0495612_0000795 3300053078 Bacteria 12832
238 Ga0495595_0001780 3300053084 Bacteria 8401
239 Ga0495619_0001605 3300053085 Bacteria 14871
240 Ga0495619_0127678 3300053085 Bacteria 1746
241 Ga0500643_022754 3300053087 Bacteria 2012
242 Ga0500644_0002004 3300053088 Bacteria 5187
243 Ga0500651_0029703 3300053093 Bacteria 3439
244 Ga0500641_0016258 3300053096 Bacteria 2769
245 Ga0500595_000002 3300053119 Bacteria 1074388
246 Ga0500595_008303 3300053119 Bacteria 4249
247 Ga0500616_0000002 3300053153 Bacteria 1611257
248 Ga0500616_0043553 3300053153 Bacteria 2398
249 Ga0500645_000410 3300053730 Bacteria 30009
250 Ga0590077_017394 3300059426 Bacteria 1512
251 Ga0501082_0117670 3300060353 Bacteria 2302
252 Ga0530510_0050382 3300061734 Bacteria 3008
253 Ga0530510_0086247 3300061734 Bacteria 2287

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300035119 Ga0373956_0100387 Ga0373956_0100387_377_1285 280
2 3300048910 Ga0496107_0222245 Ga0496107_0222245_55_1008 294
3 3300047317 Ga0495604_0215028 Ga0495604_0215028_319_1302 305
4 3300009094 Ga0111539_10003401 Ga0111539_1000340114 307
5 3300009553 Ga0105249_10025232 Ga0105249_100252324 307
6 3300045051 Ga0451576_0023568 Ga0451576_0023568_303_1292 307
7 3300038443 Ga0395901_0238257 Ga0395901_0238257_444_1475 312
8 3300050516 nmdc:mga0sz30_47033_c1 nmdc:mga0sz30_47033_c1_83_1102 318
9 3300005364 Ga0070673_100000191 Ga0070673_10000019124 320
10 3300027907 Ga0207428_10000947 Ga0207428_1000094715 320
11 3300028381 Ga0268264_10054175 Ga0268264_100541752 320
12 3300050513 nmdc:mga0rr50_19830_c1 nmdc:mga0rr50_19830_c1_2219_3295 320
13 3300048909 Ga0496106_0094473 Ga0496106_0094473_1003_2049 325
14 3300035207 Ga0373942_0004460 Ga0373942_0004460_1233_2279 326
15 3300005444 Ga0070694_100128471 Ga0070694_1001284711 327
16 3300032002 Ga0307416_100152695 Ga0307416_1001526952 331
17 3300059426 Ga0590077_017394 Ga0590077_017394_172_1314 331
18 3300049569 Ga0501032_0024752 Ga0501032_0024752_1586_2674 332
19 3300049571 Ga0501034_0026169 Ga0501034_0026169_2047_3135 332
20 3300049572 Ga0501036_0000164 Ga0501036_0000164_8052_9140 332
21 3300049573 Ga0501037_0006302 Ga0501037_0006302_6275_7363 332
22 3300049579 Ga0501043_0001053 Ga0501043_0001053_12508_13596 332
23 3300049581 Ga0501047_0000218 Ga0501047_0000218_15010_16098 332
24 3300049582 Ga0501048_0000762 Ga0501048_0000762_7799_8887 332
25 3300049585 Ga0501069_0091543 Ga0501069_0091543_310_1398 332
26 3300049586 Ga0501070_0004965 Ga0501070_0004965_7499_8587 332
27 3300049589 Ga0501073_0228173 Ga0501073_0228173_31_1119 332
28 3300049590 Ga0501074_0005730 Ga0501074_0005730_267_1355 332
29 3300049742 Ga0501080_0000489 Ga0501080_0000489_15113_16201 332
30 3300049744 Ga0501083_0002238 Ga0501083_0002238_10278_11366 332
31 3300049823 Ga0501044_0000931 Ga0501044_0000931_11722_12810 332
32 3300046523 Ga0495644_0072339 Ga0495644_0072339_150_1253 333
33 3300046648 Ga0495611_0027749 Ga0495611_0027749_418_1521 333
34 3300046684 Ga0495669_0045395 Ga0495669_0045395_651_1754 333
35 3300049571 Ga0501034_0169757 Ga0501034_0169757_721_1824 333
36 3300005336 Ga0070680_100017952 Ga0070680_1000179522 335
37 3300005366 Ga0070659_100226884 Ga0070659_1002268841 335
38 3300026142 Ga0207698_10177372 Ga0207698_101773721 335
39 3300048929 Ga0496126_0092883 Ga0496126_0092883_1036_2148 336
40 3300049574 Ga0501038_0101812 Ga0501038_0101812_832_1935 337
41 3300049571 Ga0501034_0049146 Ga0501034_0049146_964_2052 338
42 3300005981 Ga0081538_10001263 Ga0081538_1000126312 339
43 iso_pu_bacteria 2524023250 2524610805 339
44 3300035241 Ga0373961_0001449 Ga0373961_0001449_4454_5593 340
45 3300044712 Ga0453684_0000020 Ga0453684_0000020_426393_427520 341
46 3300049589 Ga0501073_0057975 Ga0501073_0057975_1487_2614 341
47 3300050495 nmdc:mga04h51_81904_c1 nmdc:mga04h51_81904_c1_40_1128 341
48 3300053093 Ga0500651_0029703 Ga0500651_0029703_699_1796 342
49 3300005436 Ga0070713_100010983 Ga0070713_1000109836 343
50 3300031240 Ga0265320_10000960 Ga0265320_1000096017 343
51 3300031711 Ga0265314_10027903 Ga0265314_100279034 343
52 3300046472 Ga0495580_0245418 Ga0495580_0245418_82_1191 343
53 3300047470 Ga0495681_0076209 Ga0495681_0076209_126_1259 343
54 iso_pu_bacteria 2513237098 2513676836 343
55 iso_pu_bacteria 2885383462 2885386632 343
56 iso_pu_bacteria 2903768456 2903774616 343
57 iso_pu_bacteria 8056681323 8056684083 343
58 iso_pu_bacteria 8056689827 8056695784 343
59 3300005937 Ga0081455_10004176 Ga0081455_1000417617 344
60 3300005937 Ga0081455_10015330 Ga0081455_100153303 344
61 3300006038 Ga0075365_10002226 Ga0075365_100022261 344
62 3300006051 Ga0075364_10016489 Ga0075364_100164895 344
63 3300025939 Ga0207665_10073275 Ga0207665_100732752 344
64 3300031247 Ga0265340_10071270 Ga0265340_100712703 344
65 3300035691 Ga0373931_0068095 Ga0373931_0068095_518_1663 344
66 3300044712 Ga0453684_0022654 Ga0453684_0022654_4858_5985 344
67 3300048925 Ga0496122_0060228 Ga0496122_0060228_101_1231 344
68 3300048929 Ga0496126_0055592 Ga0496126_0055592_929_2059 344
69 3300048929 Ga0496126_0076084 Ga0496126_0076084_1418_2527 344
70 3300050489 nmdc:mga03683_1837_c1 nmdc:mga03683_1837_c1_3474_4577 344
71 3300050491 nmdc:mga00v17_95664_c1 nmdc:mga00v17_95664_c1_691_1794 344
72 3300050492 nmdc:mga0yw44_50870_c1 nmdc:mga0yw44_50870_c1_681_1784 344
73 3300053096 Ga0500641_0016258 Ga0500641_0016258_572_1681 344
74 iso_pu_bacteria 2513237141 2513889379 344
75 iso_pu_bacteria 2524023210 2524469895 344
76 3300005331 Ga0070670_100018981 Ga0070670_1000189816 345
77 3300005337 Ga0070682_100044961 Ga0070682_1000449613 345
78 3300005338 Ga0068868_100045528 Ga0068868_1000455281 345
79 3300005347 Ga0070668_100195521 Ga0070668_1001955212 345
80 3300005355 Ga0070671_100125989 Ga0070671_1001259891 345
81 3300005365 Ga0070688_100086694 Ga0070688_1000866942 345
82 3300005439 Ga0070711_100008995 Ga0070711_1000089951 345
83 3300005439 Ga0070711_100140035 Ga0070711_1001400352 345
84 3300005535 Ga0070684_100230596 Ga0070684_1002305961 345
85 3300005614 Ga0068856_100071204 Ga0068856_1000712044 345
86 3300005718 Ga0068866_10002715 Ga0068866_100027155 345
87 3300005840 Ga0068870_10023790 Ga0068870_100237905 345
88 3300005842 Ga0068858_100055131 Ga0068858_1000551312 345
89 3300005842 Ga0068858_100184454 Ga0068858_1001844542 345
90 3300005843 Ga0068860_100011366 Ga0068860_10001136611 345
91 3300006038 Ga0075365_10034820 Ga0075365_100348204 345
92 3300006038 Ga0075365_10051705 Ga0075365_100517052 345
93 3300006358 Ga0068871_100045370 Ga0068871_1000453703 345
94 3300006844 Ga0075428_100009524 Ga0075428_1000095246 345
95 3300006844 Ga0075428_100119637 Ga0075428_1001196373 345
96 3300009093 Ga0105240_10129758 Ga0105240_101297582 345
97 3300009147 Ga0114129_10018793 Ga0114129_100187937 345
98 3300009177 Ga0105248_10083940 Ga0105248_100839404 345
99 3300011119 Ga0105246_10027136 Ga0105246_100271363 345
100 3300014745 Ga0157377_10024270 Ga0157377_100242701 345
101 3300014968 Ga0157379_10014568 Ga0157379_100145681 345
102 3300025901 Ga0207688_10008788 Ga0207688_100087881 345
103 3300025908 Ga0207643_10024632 Ga0207643_100246323 345
104 3300025916 Ga0207663_10005264 Ga0207663_100052646 345
105 3300025920 Ga0207649_10109575 Ga0207649_101095752 345
106 3300025931 Ga0207644_10201174 Ga0207644_102011741 345
107 3300025941 Ga0207711_10040516 Ga0207711_100405161 345
108 3300025942 Ga0207689_10073515 Ga0207689_100735153 345
109 3300026075 Ga0207708_10002721 Ga0207708_1000272110 345
110 3300026078 Ga0207702_10089597 Ga0207702_100895973 345
111 3300026089 Ga0207648_10024588 Ga0207648_100245881 345
112 3300026118 Ga0207675_100181177 Ga0207675_1001811771 345
113 3300037853 Ga0436364_0136711 Ga0436364_0136711_293_1432 345
114 3300039438 Ga0436360_0687479 Ga0436360_0687479_285_1475 345
115 3300044765 Ga0466970_0097362 Ga0466970_0097362_200_1315 345
116 3300048903 Ga0496100_0023288 Ga0496100_0023288_1566_2714 345
117 3300048904 Ga0496101_0059392 Ga0496101_0059392_1580_2728 345
118 3300048905 Ga0496102_0005977 Ga0496102_0005977_5051_6199 345
119 3300048905 Ga0496102_0385094 Ga0496102_0385094_134_1282 345
120 3300048908 Ga0496105_0011729 Ga0496105_0011729_4512_5660 345
121 3300048909 Ga0496106_0016377 Ga0496106_0016377_291_1439 345
122 3300048909 Ga0496106_0080448 Ga0496106_0080448_787_1935 345
123 3300048911 Ga0496108_0013177 Ga0496108_0013177_3048_4196 345
124 3300048912 Ga0496109_0001302 Ga0496109_0001302_3857_5005 345
125 3300048912 Ga0496109_0048064 Ga0496109_0048064_128_1276 345
126 3300048914 Ga0496111_0020509 Ga0496111_0020509_2576_3724 345
127 3300048915 Ga0496112_0004880 Ga0496112_0004880_6525_7673 345
128 3300048915 Ga0496112_0005955 Ga0496112_0005955_938_2086 345
129 3300048916 Ga0496113_0000394 Ga0496113_0000394_4603_5751 345
130 3300048917 Ga0496114_0018298 Ga0496114_0018298_1638_2786 345
131 3300050492 nmdc:mga0yw44_41499_c1 nmdc:mga0yw44_41499_c1_552_1736 345
132 3300050507 nmdc:mga05p37_111360_c1 nmdc:mga05p37_111360_c1_914_2029 345
133 3300050510 nmdc:mga06r32_62349_c1 nmdc:mga06r32_62349_c1_391_1506 345
134 iso_pu_bacteria 2517572143 2517893263 345
135 iso_pu_bacteria 2524023228 2524537156 345
136 iso_pu_bacteria 2885374607 2885374857 345
137 iso_pu_bacteria 2904690495 2904696693 345
138 iso_pu_bacteria 2906635258 2906642268 345
139 iso_pu_bacteria 2906660503 2906667970 345
140 iso_pu_bacteria 2908739725 2908743658 345
141 iso_pu_bacteria 2908756301 2908761313 345
142 iso_pu_bacteria 8006933436 8006941783 345
143 iso_pu_bacteria 8006973647 8006981531 345
144 3300005340 Ga0070689_100018095 Ga0070689_1000180953 346
145 3300005615 Ga0070702_100002122 Ga0070702_1000021226 346
146 3300009148 Ga0105243_10045048 Ga0105243_100450483 346
147 3300048907 Ga0496104_0096220 Ga0496104_0096220_327_1475 346
148 3300048910 Ga0496107_0001255 Ga0496107_0001255_12229_13377 346
149 3300048913 Ga0496110_0017147 Ga0496110_0017147_1230_2378 346
150 3300048914 Ga0496111_0008814 Ga0496111_0008814_1576_2724 346
151 3300048916 Ga0496113_0092856 Ga0496113_0092856_175_1323 346
152 3300048918 Ga0496115_0004440 Ga0496115_0004440_1613_2761 346
153 3300050512 nmdc:mga0n895_274069_c1 nmdc:mga0n895_274069_c1_282_1397 346
154 3300050513 nmdc:mga0rr50_29462_c1 nmdc:mga0rr50_29462_c1_1242_2360 346
155 3300053087 Ga0500643_022754 Ga0500643_022754_17_1126 346
156 3300053088 Ga0500644_0002004 Ga0500644_0002004_3800_4939 346
157 3300053119 Ga0500595_000002 Ga0500595_000002_347366_348475 346
158 3300053119 Ga0500595_008303 Ga0500595_008303_650_1759 346
159 3300053153 Ga0500616_0000002 Ga0500616_0000002_420843_421982 346
160 3300053153 Ga0500616_0043553 Ga0500616_0043553_392_1504 346
161 3300053730 Ga0500645_000410 Ga0500645_000410_5878_6987 346
162 iso_pu_bacteria 2996336353 2996341722 346
163 3300005336 Ga0070680_100238995 Ga0070680_1002389951 347
164 3300006038 Ga0075365_10099261 Ga0075365_100992612 347
165 3300006042 Ga0075368_10026752 Ga0075368_100267522 347
166 3300006048 Ga0075363_100029233 Ga0075363_1000292332 347
167 3300006051 Ga0075364_10071641 Ga0075364_100716411 347
168 3300006186 Ga0075369_10040780 Ga0075369_100407802 347
169 3300006353 Ga0075370_10017678 Ga0075370_100176784 347
170 3300007788 Ga0099795_10000155 Ga0099795_100001554 347
171 3300010159 Ga0099796_10000545 Ga0099796_100005454 347
172 3300025939 Ga0207665_10001692 Ga0207665_100016923 347
173 3300027512 Ga0209179_1000126 Ga0209179_10001264 347
174 3300031241 Ga0265325_10003453 Ga0265325_1000345310 347
175 3300031595 Ga0265313_10000438 Ga0265313_1000043832 347
176 3300046460 Ga0495638_0038630 Ga0495638_0038630_1850_3022 347
177 3300049577 Ga0501041_0071911 Ga0501041_0071911_167_1279 347
178 3300049584 Ga0501068_0073708 Ga0501068_0073708_557_1675 347
179 3300049587 Ga0501071_0111971 Ga0501071_0111971_188_1306 347
180 3300049588 Ga0501072_0009156 Ga0501072_0009156_3970_5097 347
181 3300049592 Ga0501076_0034739 Ga0501076_0034739_1628_2755 347
182 3300050495 nmdc:mga04h51_38449_c1 nmdc:mga04h51_38449_c1_181_1287 347
183 3300050496 nmdc:mga07m45_19801_c1 nmdc:mga07m45_19801_c1_2125_3231 347
184 3300060353 Ga0501082_0117670 Ga0501082_0117670_317_1435 347
185 3300061734 Ga0530510_0050382 Ga0530510_0050382_462_1589 347
186 3300061734 Ga0530510_0086247 Ga0530510_0086247_285_1403 347
187 3300005535 Ga0070684_100353069 Ga0070684_1003530691 348
188 3300009094 Ga0111539_10022902 Ga0111539_100229027 348
189 3300025909 Ga0207705_10048180 Ga0207705_100481802 348
190 3300005295 Ga0065707_10119681 Ga0065707_101196813 349
191 3300005328 Ga0070676_10101366 Ga0070676_101013662 349
192 3300005336 Ga0070680_100066615 Ga0070680_1000666153 349
193 3300005338 Ga0068868_100096912 Ga0068868_1000969122 349
194 3300005339 Ga0070660_100062174 Ga0070660_1000621742 349
195 3300005354 Ga0070675_100049831 Ga0070675_1000498313 349
196 3300005367 Ga0070667_100032349 Ga0070667_1000323495 349
197 3300005547 Ga0070693_100108432 Ga0070693_1001084322 349
198 3300005563 Ga0068855_100136856 Ga0068855_1001368562 349
199 3300005578 Ga0068854_100112874 Ga0068854_1001128742 349
200 3300005719 Ga0068861_100177774 Ga0068861_1001777741 349
201 3300005841 Ga0068863_100229392 Ga0068863_1002293922 349
202 3300005842 Ga0068858_100189370 Ga0068858_1001893702 349
203 3300006038 Ga0075365_10112543 Ga0075365_101125432 349
204 3300006881 Ga0068865_100053184 Ga0068865_1000531843 349
205 3300025271 Ga0207666_1003103 Ga0207666_10031032 349
206 3300025885 Ga0207653_10027516 Ga0207653_100275161 349
207 3300025921 Ga0207652_10092880 Ga0207652_100928803 349
208 3300025923 Ga0207681_10090654 Ga0207681_100906543 349
209 3300025932 Ga0207690_10049570 Ga0207690_100495702 349
210 3300026023 Ga0207677_10145260 Ga0207677_101452601 349
211 3300026035 Ga0207703_10368529 Ga0207703_103685292 349
212 3300026088 Ga0207641_10467183 Ga0207641_104671831 349
213 3300026089 Ga0207648_10200866 Ga0207648_102008661 349
214 3300026118 Ga0207675_100234421 Ga0207675_1002344211 349
215 3300027682 Ga0209971_1017778 Ga0209971_10177782 349
216 3300027717 Ga0209998_10001005 Ga0209998_100010054 349
217 3300027876 Ga0209974_10006247 Ga0209974_100062474 349
218 3300041413 Ga0439465_0058762 Ga0439465_0058762_51_1178 349
219 3300002459 JGI24751J29686_10026261 JGI24751J29686_100262611 350
220 3300005290 Ga0065712_10090507 Ga0065712_100905072 350
221 3300005338 Ga0068868_100000287 Ga0068868_10000028733 350
222 3300005345 Ga0070692_10010746 Ga0070692_100107464 350
223 3300005347 Ga0070668_100001169 Ga0070668_10000116913 350
224 3300005456 Ga0070678_100271934 Ga0070678_1002719341 350
225 3300005539 Ga0068853_100100126 Ga0068853_1001001262 350
226 3300005544 Ga0070686_100001852 Ga0070686_1000018523 350
227 3300005547 Ga0070693_100003405 Ga0070693_1000034053 350
228 3300005564 Ga0070664_100097137 Ga0070664_1000971372 350
229 3300005614 Ga0068856_100228686 Ga0068856_1002286862 350
230 3300005617 Ga0068859_100002296 Ga0068859_10000229618 350
231 3300005842 Ga0068858_100047364 Ga0068858_1000473643 350
232 3300005937 Ga0081455_10000009 Ga0081455_10000009235 350
233 3300006175 Ga0070712_100115187 Ga0070712_1001151872 350
234 3300006931 Ga0097620_100002296 Ga0097620_10000229618 350
235 3300009174 Ga0105241_10003767 Ga0105241_100037671 350
236 3300013308 Ga0157375_10039024 Ga0157375_100390242 350
237 3300014745 Ga0157377_10026019 Ga0157377_100260193 350
238 3300025885 Ga0207653_10003139 Ga0207653_100031393 350
239 3300025899 Ga0207642_10000453 Ga0207642_100004534 350
240 3300025908 Ga0207643_10000523 Ga0207643_100005233 350
241 3300025911 Ga0207654_10001610 Ga0207654_100016107 350
242 3300025912 Ga0207707_10001147 Ga0207707_1000114714 350
243 3300025924 Ga0207694_10128409 Ga0207694_101284092 350
244 3300025935 Ga0207709_10009025 Ga0207709_100090253 350
245 3300026078 Ga0207702_10003767 Ga0207702_100037672 350
246 3300026089 Ga0207648_10082742 Ga0207648_100827423 350
247 3300026121 Ga0207683_10000037 Ga0207683_100000371 350
248 3300035117 Ga0373953_0049532 Ga0373953_0049532_187_1305 350
249 3300035118 Ga0373954_0011780 Ga0373954_0011780_948_2066 350
250 3300035172 Ga0373955_0008707 Ga0373955_0008707_2743_3861 350
251 3300035725 Ga0373947_0204188 Ga0373947_0204188_44_1162 350
252 3300036401 Ga0373937_0098200 Ga0373937_0098200_682_1800 350
253 3300046454 Ga0495592_0070753 Ga0495592_0070753_1186_2304 350
254 3300046462 Ga0495651_0067157 Ga0495651_0067157_1333_2451 350
255 3300046477 Ga0495664_0074190 Ga0495664_0074190_449_1567 350
256 3300046511 Ga0495608_0055798 Ga0495608_0055798_1321_2439 350
257 3300046516 Ga0495628_0014081 Ga0495628_0014081_3907_5025 350
258 3300046529 Ga0495652_0010378 Ga0495652_0010378_4223_5341 350
259 3300046533 Ga0495640_0087133 Ga0495640_0087133_218_1336 350
260 3300046536 Ga0495587_0081263 Ga0495587_0081263_538_1656 350
261 3300046663 Ga0495635_0029945 Ga0495635_0029945_1395_2513 350
262 3300046675 Ga0495657_0039832 Ga0495657_0039832_560_1678 350
263 3300046678 Ga0495599_0002940 Ga0495599_0002940_3688_4806 350
264 3300046679 Ga0495623_0029465 Ga0495623_0029465_1944_3062 350
265 3300048088 Ga0495602_0009515 Ga0495602_0009515_3146_4264 350
266 3300048907 Ga0496104_0000196 Ga0496104_0000196_10178_11299 350
267 3300048908 Ga0496105_0002714 Ga0496105_0002714_5233_6354 350
268 3300053077 Ga0495601_0081747 Ga0495601_0081747_608_1726 350
269 3300053078 Ga0495612_0000795 Ga0495612_0000795_11333_12451 350
270 3300053084 Ga0495595_0001780 Ga0495595_0001780_3979_5097 350
271 3300053085 Ga0495619_0001605 Ga0495619_0001605_2110_3228 350
272 3300053085 Ga0495619_0127678 Ga0495619_0127678_524_1642 350

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF21102

DprA_N

DprA-like N-terminal HHH domain

72

136

0.98

PF02481

DNA_processg_A

DNA recombination-mediator protein A

197

319

0.96

PF17782

DprA_WH

DprA winged helix domain

342

404

0.94

PF02481

DNA_processg_A

DNA recombination-mediator protein A

136

207

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
1j75-assembly1.cif.gz_A-2 crystal structure of the dna-binding domain zalpha of dlm-1 bound to z-dna 0.8948 297 350
2heo-assembly1.cif.gz_D general structure-based approach to the design of protein ligands: application to the design of kv1.2 potassium channel blockers. 0.8892 296 350
4lb5-assembly1.cif.gz_A-2 crystal structure of pkz zalpha in complex with ds(cg)6 (hexagonal form) 0.8887 298 350
3f22-assembly2.cif.gz_C crystal structure of zalpha in complex with d(cgtacg) 0.8817 296 349
2heo-assembly1.cif.gz_A general structure-based approach to the design of protein ligands: application to the design of kv1.2 potassium channel blockers. 0.8675 296 349
ID Description Score Start End Superfamily
3majA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9789 293 349 1.10.10.10
3majA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9276 3 269 3.40.50.450
af_Q2FZ33_2_246_3.40.50.450 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9243 68 264 3.40.50.450
3majA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.916 293 349 1.10.10.10
af_P37671_22_94_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.914 297 350 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A528URS4-F1-model_v4 DNA-protecting protein DprA 0.988 5 121 GO:0009294
AF-A0A139PN59-F1-model_v4 Rossmann fold nucleotide-binding protein Smf 0.9731 187 265 GO:0009294
AF-A0A5S9M9R6-F1-model_v4 DNA recombination-mediator protein A 0.9726 178 263 GO:0009294
AF-A0A2N7S844-F1-model_v4 deleted 0.9684 2 138
AF-A0A1Q6KJ76-F1-model_v4 DNA protecting protein DprA 0.9615 79 268 GO:0009294

Feature Viewer

pLDDT pTM Quality
87.3 0.86 High
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Predicted Structure (AlphaFold2)

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