F375877

General Info

Members Datasets Scaffolds Average Seq Length
268 217 180 437

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2842198810|2842200030
Length 481
Sequence PSGRRSSQNIPAERSAWRSATSPNTQWTGNSSSNQRRCNKLMEGWGRYPRHESQAINCQLPEALSGTVAARVGLIGRGNGRSYGDAAIGEQATLMCRGLSRMRNFDPTGATLTVEGGVMLSDILRAFVPRGYFPPVVPGTKFVTVGGMIASDVHGKNHHCDGGFGDHVSELKLVVAGGEILICSRTRNPELFFATVGGMGMTGIIAEATFRLKPIESGWIAQKTIVAENLGDALKALQQTEDVTYSVAWIDCLSQGASLGRSLIFAGEHATRDQVGGMPDAGRFAAKNAGRFSLPFDLPQWMLNKTSVAAFNEIYFRAGARKAAMTSLVHWDKFFFPLDGILEWNRLYGRRGFLQHQCVVPAEEALAVLSGILERFARSGKGSFLAVLKKLGGGSGLLSFPAPGYTLALDLPVTQEVSRLLDEIDELVVKAGGRLYLAKDARQSRHTFEAGYPRLSAFKELRKVTGADRHFNSRLAKRLGI

Samples

Sample ID Description Type Environment
1 2517287029 Rhizobium leguminosarum bv. trifolii SRDI565 Isolate Nodule
2 2602042107 Bradyrhizobium sp. NFR13 Isolate Rhizoplane
3 2615840624 Rhizobium aethiopicum HBR26 Isolate Nodule
4 2718217882 Rhizobium sp. N741 Isolate Nodule
5 2718217927 Rhizobium sp. N324 Isolate Nodule
6 2718217997 Rhizobium phaseoli sv. phaseoli R723 Isolate Nodule
7 2718218009 Rhizobium sp. N561 Isolate Nodule
8 2718218199 Rhizobium phaseoli sv. phaseoli N261 Isolate Nodule
9 2718218232 Rhizobium phaseoli sv. phaseoli N161 Isolate Nodule
10 2718218233 Rhizobium phaseoli sv. phaseoli R744 Isolate Nodule
11 2718218235 Rhizobium phaseoli sv. phaseoli R620 Isolate Nodule
12 2718218269 Rhizobium phaseoli sv. phaseoli N671 Isolate Nodule
13 2718218363 Rhizobium sp. N113 Isolate Nodule
14 2718218365 Rhizobium sp. N731 Isolate Nodule
15 2718218366 Rhizobium sp. N621 Isolate Nodule
16 2718218423 Rhizobium sp. N941 Isolate Nodule
17 2721755514 Rhizobium sp. N6212 Isolate Nodule
18 2721755556 Rhizobium phaseoli sv. phaseoli N931 Isolate Nodule
19 2721755684 Rhizobium phaseoli sv. phaseoli N841 Isolate Nodule
20 2721755685 Rhizobium phaseoli sv. phaseoli R611 Isolate Nodule
21 2721755809 Rhizobium sp. N541 Isolate Nodule
22 2721755810 Rhizobium sp. N871 Isolate Nodule
23 2721755819 Rhizobium phaseoli sv. phaseoli N771 Isolate Nodule
24 2721755822 Rhizobium phaseoli sv. phaseoli R650 Isolate Nodule
25 2721755823 Rhizobium phaseoli sv. phaseoli R630 Isolate Nodule
26 2728369352 Rhizobium phaseoli sv. phaseoli N831 Isolate Nodule
27 2728369365 Rhizobium sp. N1341 Isolate Nodule
28 2728369397 Rhizobium sp. N1314 Isolate Nodule
29 2773857925 Microvirga vignae BR3299 Isolate Unclassified
30 2791355256 Rhizobium sp. M10 Isolate Nodule
31 2791355260 Rhizobium sp. L9 Isolate Nodule
32 2791355262 Rhizobium sp. M1 Isolate Nodule
33 2791355264 Rhizobium sp. S9 Isolate Nodule
34 2791355265 Rhizobium sp. H4 Isolate Nodule
35 2802429605 Rhizobium sophoriradicis L101 Isolate Nodule
36 2802429606 Rhizobium sophoriradicis JJW1 Isolate Nodule
37 2830075706 Sphingomonas jinjuensis DSM 21457 Isolate Rhizosphere
38 2838016132 Rhizobium phaseoli SEMIA 4071 Isolate Nodule
39 2838022645 Rhizobium aethiopicum SEMIA 4074 Isolate Nodule
40 2838048938 Rhizobium pisi 27/80 Isolate Nodule
41 2838061910 Rhizobium phaseoli L15 Isolate Nodule
42 2838068647 Rhizobium esperanzae VC28 Isolate Nodule
43 2838668709 Rhizobium sophoriradicis SEMIA 403 Isolate Nodule
44 2838701080 Rhizobium aethiopicum SEMIA 428 Isolate Nodule
45 2842192696 Rhizobium esperanzae SEMIA 468 Isolate Nodule
46 2842198810 Rhizobium aethiopicum SEMIA 470 Isolate Nodule
47 2842205361 Rhizobium etli SEMIA 471 Isolate Nodule
48 2842250916 Rhizobium etli SEMIA 484 Isolate Nodule
49 2842264693 Rhizobium phaseoli SEMIA 487 Isolate Nodule
50 2842278818 Rhizobium etli SEMIA 489 Isolate Nodule
51 2842311132 Rhizobium phaseoli SEMIA 4002 Isolate Nodule
52 2842317721 Rhizobium etli SEMIA 4004 Isolate Nodule
53 2842422224 Rhizobium esperanzae SEMIA 4042 Isolate Nodule
54 2842428310 Rhizobium phaseoli SEMIA 4050 Isolate Nodule
55 2842434925 Rhizobium esperanzae SEMIA 4051 Isolate Nodule
56 2842441272 Rhizobium esperanzae SEMIA 4053 Isolate Nodule
57 2842447887 Rhizobium esperanzae SEMIA 4055 Isolate Nodule
58 2842462802 Rhizobium phaseoli SEMIA 4057 Isolate Nodule
59 2842469257 Rhizobium phaseoli SEMIA 4058 Isolate Nodule
60 2842489311 Rhizobium sophoriradicis SEMIA 4061 Isolate Nodule
61 2842495871 Rhizobium etli SEMIA 4062 Isolate Nodule
62 2857516855 Rhizobium sp. R-72456 Isolate Unclassified
63 2857524615 Tardiphaga sp. R-73074 Isolate Unclassified
64 2861691609 Methylorubrum thiocyanatum DSM 11490 Isolate Rhizosphere
65 2882456835 Microvirga sp. KLBC 81 Isolate Unclassified
66 2894232714 Microvirga tunisiensis Lmie10 Isolate Nodule
67 2902330777 Methylobacterium sp. 2A Isolate Unclassified
68 2919450847 Ancylobacter sp. 3268 Isolate Rhizosphere
69 2933599457 Rhizobium phaseoli M3 Isolate Nodule
70 2936367885 Rhizobium changzhiense WYCCWR 11290 Isolate Nodule
71 2936375103 Rhizobium changzhiense WYCCWR 11317 Isolate Nodule
72 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
73 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
74 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
75 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
76 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
77 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
78 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
79 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
80 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
81 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
82 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
83 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
84 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
85 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
86 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
87 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
88 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
89 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
90 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
91 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
92 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
93 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
94 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
95 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
96 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
97 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
98 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
99 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
100 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
101 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
102 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
103 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
104 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
105 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
106 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300027357 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) Metagenome Nodule
115 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
116 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
117 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
119 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
120 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
121 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
122 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
123 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
124 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
125 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
126 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
127 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
128 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
129 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
130 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
131 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
132 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
133 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
134 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
135 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
136 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
137 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
138 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
139 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
140 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
141 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
142 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
143 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
144 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
145 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
146 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
147 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
148 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
149 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
150 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
151 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
152 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
153 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
154 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
155 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
156 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
157 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
162 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
166 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
170 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
171 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
172 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
173 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
174 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
175 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
176 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
177 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
178 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
179 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
180 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
181 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
182 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
183 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
184 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
185 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
186 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
187 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
188 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
189 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
190 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
191 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
192 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
193 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
194 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
195 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
196 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
197 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
198 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
199 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
200 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
201 8005275841 Rhizobium sp. N4311 Isolate Nodule
202 8005282627 Rhizobium phaseoli NC1 Isolate Nodule
203 8005289223 Rhizobium bangladeshense 1002 Isolate Nodule
204 8005301065 Rhizobium bangladeshense 1017 Isolate Nodule
205 8005376324 Rhizobium changzhiense WYCCWR 11279 Isolate Nodule
206 8005382845 Rhizobium sp. R634 Isolate Nodule
207 8005395548 Rhizobium sp. R339 Isolate Nodule
208 8005430974 Rhizobium phaseoli Y20 Isolate Nodule
209 8005497431 Rhizobium phaseoli CCGM8 Isolate Unclassified
210 8005619151 Rhizobium phaseoli CCGM2 Isolate Unclassified
211 8005626139 Rhizobium phaseoli Y18 Isolate Nodule
212 8005668836 Rhizobium phaseoli CCGM9 Isolate Unclassified
213 8005688590 Rhizobium bangladeshense 1024 Isolate Nodule
214 8018127388 Rhizobium aegyptiacum 950 Isolate Nodule
215 8018176218 Rhizobium sp. N122 Isolate Nodule
216 8024501048 Rhizobium sp. H4 Isolate Nodule
217 8056382006 Rhizobium croatiense 13T Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 67.16
Metatranscriptomes 0
Isolates 32.84

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.6
Nodule 30.6
Rhizoplane 0.75
Rhizosphere 54.48
Stem 0
Stem Tuber 0
Unclassified 8.58

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10000821 3300003203 Bacteria 14594
2 JGI25406J46586_10001120 3300003203 Bacteria 12551
3 rootH1_10130239 3300003323 Unclassified 2828
4 Ga0070660_100215328 3300005339 Bacteria 1560
5 Ga0070694_100204383 3300005444 Bacteria 1474
6 Ga0070706_100008718 3300005467 Bacteria 9452
7 Ga0070706_100022077 3300005467 Bacteria 5861
8 Ga0070707_100001344 3300005468 Bacteria 24173
9 Ga0070698_100005981 3300005471 Bacteria 13263
10 Ga0070699_100012210 3300005518 Bacteria 7412
11 Ga0068853_100094390 3300005539 Bacteria 2636
12 Ga0070665_100000393 3300005548 Bacteria 64556
13 Ga0068859_100002658 3300005617 Bacteria 18141
14 Ga0068859_100126663 3300005617 Bacteria 2623
15 Ga0068864_100308033 3300005618 Bacteria 1484
16 Ga0068860_100010558 3300005843 Bacteria 9125
17 Ga0081539_10000029 3300005985 Bacteria 322399
18 Ga0081539_10000036 3300005985 Bacteria 296724
19 Ga0075365_10001213 3300006038 Bacteria 11402
20 Ga0075364_10032397 3300006051 Plasmid 3360
21 Ga0075367_10044025 3300006178 Plasmid 2615
22 Ga0075369_10010890 3300006186 Plasmid 3564
23 Ga0075430_100047997 3300006846 Bacteria 3605
24 Ga0075431_100009888 3300006847 Bacteria 9577
25 Ga0075431_100132310 3300006847 Bacteria 2573
26 Ga0075433_10131549 3300006852 Bacteria 2223
27 Ga0075429_100111271 3300006880 Bacteria 2394
28 Ga0075436_100116941 3300006914 Bacteria 1864
29 Ga0097620_100002658 3300006931 Bacteria 18141
30 Ga0097620_100126661 3300006931 Bacteria 2623
31 Ga0099824_1008618 3300006942 Bacteria 12970
32 Ga0079104_1008697 3300006946 Bacteria 3515
33 Ga0105240_10017590 3300009093 Bacteria 9631
34 Ga0111539_10188444 3300009094 Bacteria 2408
35 Ga0114129_10005244 3300009147 Bacteria 18266
36 Ga0114129_10439085 3300009147 Bacteria 1714
37 Ga0105248_10133925 3300009177 Bacteria 2796
38 Ga0105239_10047764 3300010375 Bacteria 4692
39 Ga0163162_10032599 3300013306 Bacteria 5175
40 Ga0214544_1000123 3300021320 Bacteria 110258
41 Ga0213872_10031673 3300021361 Bacteria 2424
42 Ga0207684_10007099 3300025910 Bacteria 10125
43 Ga0207660_10121717 3300025917 Bacteria 1977
44 Ga0207662_10108776 3300025918 Bacteria 1726
45 Ga0207652_10039518 3300025921 Bacteria 4004
46 Ga0207646_10003447 3300025922 Bacteria 17857
47 Ga0207706_10035076 3300025933 Bacteria 4462
48 Ga0207691_10006543 3300025940 Bacteria 11248
49 Ga0207639_10078102 3300026041 Bacteria 2612
50 Ga0209589_1000098 3300027357 Bacteria 88220
51 Ga0209489_100283 3300027361 Bacteria 88220
52 Ga0209700_100299 3300027363 Bacteria 88220
53 Ga0268266_10000532 3300028379 Bacteria 53266
54 Ga0265334_10007181 3300028573 Bacteria 4779
55 Ga0265323_10003187 3300028653 Bacteria 7305
56 Ga0265336_10000229 3300028666 Bacteria 39820
57 Ga0265338_10000176 3300028800 Bacteria 118726
58 Ga0265338_10008289 3300028800 Bacteria 12647
59 Ga0265324_10006235 3300029957 Bacteria 5010
60 Ga0265325_10002904 3300031241 Bacteria 11422
61 Ga0265325_10010470 3300031241 Bacteria 5368
62 Ga0265339_10000836 3300031249 Bacteria 23772
63 Ga0307408_100039921 3300031548 Bacteria 3321
64 Ga0316576_10031361 3300031727 Bacteria 3771
65 Ga0307516_10109317 3300031730 Bacteria 2570
66 Ga0307410_10164220 3300031852 Bacteria 1667
67 Ga0307407_10041172 3300031903 Bacteria 2581
68 Ga0307407_10098521 3300031903 Bacteria 1809
69 Ga0307412_10005431 3300031911 Bacteria 7152
70 Ga0307414_10054675 3300032004 Bacteria 2791
71 Ga0307411_10030557 3300032005 Bacteria 3303
72 Ga0395899_0101329 3300037312 Bacteria 2078
73 Ga0395900_0179165 3300037418 Bacteria 2154
74 Ga0395905_0008946 3300037471 Bacteria 9832
75 Ga0395905_0022338 3300037471 Bacteria 5985
76 Ga0395905_0182343 3300037471 Bacteria 1971
77 Ga0436364_0978651 3300037853 Bacteria 6828
78 Ga0395901_0009054 3300038443 Bacteria 10081
79 Ga0436361_0548065 3300039447 Bacteria 18879
80 Ga0439465_0002022 3300041413 Bacteria 6656
81 Ga0451837_1478446 3300041494 Bacteria 1581
82 Ga0439431_0017402 3300041997 Bacteria 1690
83 Ga0451577_0000628 3300042876 Bacteria 56481
84 Ga0453684_0001505 3300044712 Bacteria 65497
85 Ga0453684_0002177 3300044712 Bacteria 48912
86 Ga0451576_0000511 3300045051 Bacteria 85172
87 Ga0495618_0063878 3300046514 Bacteria 2339
88 Ga0495586_0007971 3300046535 Bacteria 5649
89 Ga0495634_0002114 3300046642 Bacteria 16758
90 Ga0495674_0001339 3300047319 Bacteria 24024
91 Ga0496105_0025607 3300048908 Bacteria 4804
92 Ga0496116_0001041 3300048919 Bacteria 33907
93 Ga0496117_0014755 3300048920 Bacteria 6708
94 Ga0496117_0047411 3300048920 Bacteria 3081
95 Ga0496118_0015621 3300048921 Bacteria 7017
96 Ga0496118_0040539 3300048921 Bacteria 3701
97 Ga0496122_0064338 3300048925 Unclassified 2669
98 Ga0496123_0045826 3300048926 Plasmid 2974
99 Ga0496125_0003568 3300048928 Bacteria 18732
100 Ga0496125_0053284 3300048928 Bacteria 3318
101 Ga0496126_0051186 3300048929 Plasmid 3761
102 Ga0496126_0090896 3300048929 Bacteria 2685
103 Ga0501031_0018605 3300049568 Unclassified 4524
104 Ga0501031_0082526 3300049568 Bacteria 2095
105 Ga0501032_0000067 3300049569 Bacteria 89910
106 Ga0501032_0028506 3300049569 Bacteria 3837
107 Ga0501033_0000117 3300049570 Bacteria 75935
108 Ga0501033_0048929 3300049570 Bacteria 3139
109 Ga0501034_0000153 3300049571 Bacteria 129892
110 Ga0501034_0016573 3300049571 Bacteria 7554
111 Ga0501034_0023954 3300049571 Bacteria 6212
112 Ga0501034_0049484 3300049571 Bacteria 4240
113 Ga0501034_0080778 3300049571 Bacteria 3254
114 Ga0501036_0012173 3300049572 Bacteria 7126
115 Ga0501037_0000081 3300049573 Bacteria 86623
116 Ga0501037_0074200 3300049573 Bacteria 2472
117 Ga0501038_0000033 3300049574 Bacteria 129840
118 Ga0501038_0004496 3300049574 Bacteria 12971
119 Ga0501038_0017741 3300049574 Bacteria 6433
120 Ga0501038_0061356 3300049574 Bacteria 3215
121 Ga0501039_0000031 3300049575 Bacteria 129814
122 Ga0501039_0023626 3300049575 Bacteria 4718
123 Ga0501039_0081878 3300049575 Bacteria 2513
124 Ga0501042_0068987 3300049578 Bacteria 2529
125 Ga0501043_0000044 3300049579 Bacteria 114304
126 Ga0501043_0000717 3300049579 Bacteria 29385
127 Ga0501043_0015836 3300049579 Bacteria 5909
128 Ga0501043_0015873 3300049579 Bacteria 5903
129 Ga0501043_0138871 3300049579 Bacteria 1903
130 Ga0501046_0002335 3300049580 Bacteria 17889
131 Ga0501046_0023571 3300049580 Bacteria 5061
132 Ga0501046_0030978 3300049580 Bacteria 4340
133 Ga0501047_0000504 3300049581 Bacteria 42147
134 Ga0501047_0015435 3300049581 Bacteria 7277
135 Ga0501047_0026091 3300049581 Bacteria 5619
136 Ga0501048_0084368 3300049582 Bacteria 2240
137 Ga0501067_0002873 3300049583 Bacteria 9487
138 Ga0501067_0056442 3300049583 Bacteria 2175
139 Ga0501068_0007003 3300049584 Bacteria 6236
140 Ga0501068_0039452 3300049584 Bacteria 2831
141 Ga0501069_0040499 3300049585 Bacteria 2575
142 Ga0501070_0176747 3300049586 Bacteria 1757
143 Ga0501072_0020095 3300049588 Bacteria 5171
144 Ga0501073_0011751 3300049589 Bacteria 6393
145 Ga0501073_0042170 3300049589 Bacteria 3222
146 Ga0501073_0115385 3300049589 Bacteria 1861
147 Ga0501080_0126349 3300049742 Bacteria 2368
148 Ga0501080_0149741 3300049742 Bacteria 2157
149 Ga0501083_0004346 3300049744 Bacteria 9981
150 Ga0501083_0091402 3300049744 Bacteria 2009
151 Ga0501035_0000609 3300049822 Bacteria 39517
152 Ga0501044_0011273 3300049823 Bacteria 9688
153 Ga0501044_0017185 3300049823 Bacteria 7761
154 Ga0501044_0021369 3300049823 Bacteria 6906
155 Ga0501044_0030407 3300049823 Bacteria 5692
156 Ga0501044_0117150 3300049823 Bacteria 2668
157 Ga0501045_0149149 3300049824 Bacteria 1740
158 nmdc:mga00v17_1190_c1 3300050491 Bacteria 13677
159 nmdc:mga0yw44_55740_c1 3300050492 Unclassified 2406
160 nmdc:mga06z11_7453_c1 3300050494 Plasmid 4501
161 nmdc:mga05p37_17017_c1 3300050507 Bacteria 8769
162 nmdc:mga0qj67_111619_c1 3300050509 Bacteria 2208
163 nmdc:mga06r32_16318_c1 3300050510 Bacteria 6765
164 nmdc:mga06r32_23694_c1 3300050510 Bacteria 5684
165 nmdc:mga08y16_135522_c1 3300050511 Bacteria 2559
166 nmdc:mga0n895_325694_c1 3300050512 Bacteria 1557
167 nmdc:mga08x19_105759_c1 3300050514 Bacteria 1872
168 nmdc:mga0a205_201542_c1 3300050515 Bacteria 1880
169 nmdc:mga0sz30_275_c1 3300050516 Bacteria 19654
170 Ga0500644_0002569 3300053088 Bacteria 4532
171 Ga0500555_000202 3300053103 Bacteria 27708
172 Ga0500642_0000009 3300053130 Bacteria 286829
173 Ga0500652_000940 3300053131 Bacteria 9635
174 Ga0500616_0001764 3300053153 Bacteria 19783
175 Ga0500622_0001070 3300053156 Bacteria 22778
176 Ga0500645_000636 3300053730 Bacteria 22311
177 Ga0501084_0007506 3300054114 Bacteria 8990
178 Ga0501084_0059992 3300054114 Bacteria 3185
179 Ga0501082_0008288 3300060353 Bacteria 8963
180 Ga0501082_0203899 3300060353 Bacteria 1721

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049579 Ga0501043_0138871 Ga0501043_0138871_23_1174 379
2 3300039447 Ga0436361_0548065 Ga0436361_0548065_14824_16104 382
3 3300021361 Ga0213872_10031673 Ga0213872_100316732 389
4 iso_pu_bacteria 2838022645 2838024487 397
5 3300048919 Ga0496116_0001041 Ga0496116_0001041_18103_19341 400
6 3300048920 Ga0496117_0014755 Ga0496117_0014755_2189_3427 400
7 3300048920 Ga0496117_0047411 Ga0496117_0047411_208_1446 400
8 3300048921 Ga0496118_0015621 Ga0496118_0015621_3230_4468 400
9 3300048921 Ga0496118_0040539 Ga0496118_0040539_477_1715 400
10 3300048925 Ga0496122_0064338 Ga0496122_0064338_60_1298 400
11 3300048926 Ga0496123_0045826 Ga0496123_0045826_958_2196 400
12 3300048928 Ga0496125_0003568 Ga0496125_0003568_11285_12523 400
13 3300048929 Ga0496126_0051186 Ga0496126_0051186_1597_2835 400
14 3300050491 nmdc:mga00v17_1190_c1 nmdc:mga00v17_1190_c1_12207_13445 400
15 3300050492 nmdc:mga0yw44_55740_c1 nmdc:mga0yw44_55740_c1_85_1323 400
16 3300050494 nmdc:mga06z11_7453_c1 nmdc:mga06z11_7453_c1_1081_2319 400
17 3300050509 nmdc:mga0qj67_111619_c1 nmdc:mga0qj67_111619_c1_658_1899 400
18 3300050510 nmdc:mga06r32_16318_c1 nmdc:mga06r32_16318_c1_5057_6298 400
19 3300050516 nmdc:mga0sz30_275_c1 nmdc:mga0sz30_275_c1_16115_17353 400
20 iso_pu_bacteria 2857524615 2857530389 400
21 3300037471 Ga0395905_0022338 Ga0395905_0022338_3761_5008 401
22 3300005539 Ga0068853_100094390 Ga0068853_1000943903 402
23 3300006946 Ga0079104_1008697 Ga0079104_10086973 404
24 3300049571 Ga0501034_0023954 Ga0501034_0023954_1870_3216 407
25 3300049579 Ga0501043_0000717 Ga0501043_0000717_1248_2594 407
26 3300049581 Ga0501047_0000504 Ga0501047_0000504_12086_13432 407
27 3300049589 Ga0501073_0042170 Ga0501073_0042170_503_1870 407
28 3300054114 Ga0501084_0007506 Ga0501084_0007506_3268_4614 407
29 iso_pu_bacteria 2861691609 2861691677 407
30 3300041494 Ga0451837_1478446 Ga0451837_1478446_77_1516 409
31 iso_pu_bacteria 2838048938 2838049518 409
32 3300009093 Ga0105240_10017590 Ga0105240_100175903 411
33 3300028573 Ga0265334_10007181 Ga0265334_100071812 411
34 3300028653 Ga0265323_10003187 Ga0265323_100031873 411
35 3300028666 Ga0265336_10000229 Ga0265336_100002296 411
36 3300028800 Ga0265338_10000176 Ga0265338_1000017669 411
37 3300029957 Ga0265324_10006235 Ga0265324_100062353 411
38 3300037853 Ga0436364_0978651 Ga0436364_0978651_4639_5910 411
39 3300037471 Ga0395905_0008946 Ga0395905_0008946_1093_2397 412
40 3300037471 Ga0395905_0182343 Ga0395905_0182343_435_1739 412
41 3300049571 Ga0501034_0016573 Ga0501034_0016573_4359_5705 412
42 3300049574 Ga0501038_0004496 Ga0501038_0004496_3558_4904 412
43 3300049575 Ga0501039_0023626 Ga0501039_0023626_195_1541 412
44 3300049578 Ga0501042_0068987 Ga0501042_0068987_128_1474 412
45 3300049579 Ga0501043_0015836 Ga0501043_0015836_2970_4316 412
46 3300049580 Ga0501046_0002335 Ga0501046_0002335_16465_17811 412
47 3300049582 Ga0501048_0084368 Ga0501048_0084368_700_2046 412
48 3300049584 Ga0501068_0039452 Ga0501068_0039452_1389_2735 412
49 3300060353 Ga0501082_0008288 Ga0501082_0008288_3676_5022 412
50 3300038443 Ga0395901_0009054 Ga0395901_0009054_5123_6463 414
51 3300042876 Ga0451577_0000628 Ga0451577_0000628_23079_24386 414
52 3300044712 Ga0453684_0001505 Ga0453684_0001505_16528_17835 414
53 3300045051 Ga0451576_0000511 Ga0451576_0000511_51749_53056 414
54 3300046535 Ga0495586_0007971 Ga0495586_0007971_2393_3727 415
55 3300046642 Ga0495634_0002114 Ga0495634_0002114_9331_10665 415
56 3300047319 Ga0495674_0001339 Ga0495674_0001339_7352_8686 415
57 3300005617 Ga0068859_100126663 Ga0068859_1001266633 417
58 3300006931 Ga0097620_100126661 Ga0097620_1001266613 417
59 3300003323 rootH1_10130239 rootH1_101302393 418
60 3300009094 Ga0111539_10188444 Ga0111539_101884441 418
61 3300026041 Ga0207639_10078102 Ga0207639_100781023 418
62 3300031241 Ga0265325_10002904 Ga0265325_100029043 418
63 3300031727 Ga0316576_10031361 Ga0316576_100313612 418
64 3300031730 Ga0307516_10109317 Ga0307516_101093172 418
65 3300044712 Ga0453684_0002177 Ga0453684_0002177_33271_34587 418
66 3300046514 Ga0495618_0063878 Ga0495618_0063878_382_1701 418
67 3300048908 Ga0496105_0025607 Ga0496105_0025607_2353_3672 418
68 3300049568 Ga0501031_0018605 Ga0501031_0018605_100_1434 418
69 3300049569 Ga0501032_0000067 Ga0501032_0000067_62901_64235 418
70 3300049570 Ga0501033_0000117 Ga0501033_0000117_57602_58936 418
71 3300049571 Ga0501034_0000153 Ga0501034_0000153_102883_104217 418
72 3300049573 Ga0501037_0000081 Ga0501037_0000081_60435_61769 418
73 3300049574 Ga0501038_0000033 Ga0501038_0000033_25676_27010 418
74 3300049575 Ga0501039_0000031 Ga0501039_0000031_102833_104167 418
75 3300049579 Ga0501043_0000044 Ga0501043_0000044_87295_88629 418
76 3300049744 Ga0501083_0091402 Ga0501083_0091402_14_1282 418
77 3300049822 Ga0501035_0000609 Ga0501035_0000609_12508_13842 418
78 3300049823 Ga0501044_0017185 Ga0501044_0017185_3562_4896 418
79 3300050511 nmdc:mga08y16_135522_c1 nmdc:mga08y16_135522_c1_441_1709 418
80 iso_pu_bacteria 2830075706 2830078077 418
81 iso_pu_bacteria 2919450847 2919451877 418
82 3300005339 Ga0070660_100215328 Ga0070660_1002153282 419
83 3300005548 Ga0070665_100000393 Ga0070665_10000039330 419
84 3300006038 Ga0075365_10001213 Ga0075365_1000121310 419
85 3300006051 Ga0075364_10032397 Ga0075364_100323972 419
86 3300006178 Ga0075367_10044025 Ga0075367_100440252 419
87 3300006186 Ga0075369_10010890 Ga0075369_100108902 419
88 3300006846 Ga0075430_100047997 Ga0075430_1000479973 419
89 3300006847 Ga0075431_100132310 Ga0075431_1001323102 419
90 3300025917 Ga0207660_10121717 Ga0207660_101217172 419
91 3300025921 Ga0207652_10039518 Ga0207652_100395182 419
92 3300028379 Ga0268266_10000532 Ga0268266_1000053220 419
93 3300031911 Ga0307412_10005431 Ga0307412_100054312 419
94 3300053088 Ga0500644_0002569 Ga0500644_0002569_762_2084 419
95 3300053130 Ga0500642_0000009 Ga0500642_0000009_66659_67981 419
96 3300053131 Ga0500652_000940 Ga0500652_000940_1002_2321 419
97 3300053156 Ga0500622_0001070 Ga0500622_0001070_3377_4699 419
98 iso_pu_bacteria 2602042107 2603860290 419
99 iso_pu_bacteria 2902330777 2902334498 419
100 3300006847 Ga0075431_100009888 Ga0075431_1000098884 420
101 3300006880 Ga0075429_100111271 Ga0075429_1001112712 420
102 3300006942 Ga0099824_1008618 Ga0099824_10086183 420
103 3300021320 Ga0214544_1000123 Ga0214544_100012368 420
104 3300025933 Ga0207706_10035076 Ga0207706_100350763 420
105 3300027357 Ga0209589_1000098 Ga0209589_100009854 420
106 3300027361 Ga0209489_100283 Ga0209489_10028354 420
107 3300027363 Ga0209700_100299 Ga0209700_10029954 420
108 3300028800 Ga0265338_10008289 Ga0265338_1000828911 420
109 3300031903 Ga0307407_10098521 Ga0307407_100985211 420
110 3300032004 Ga0307414_10054675 Ga0307414_100546753 420
111 3300041413 Ga0439465_0002022 Ga0439465_0002022_2015_3337 420
112 3300041997 Ga0439431_0017402 Ga0439431_0017402_51_1373 420
113 3300048928 Ga0496125_0053284 Ga0496125_0053284_1534_2856 420
114 3300048929 Ga0496126_0090896 Ga0496126_0090896_869_2191 420
115 3300049744 Ga0501083_0004346 Ga0501083_0004346_7569_8891 420
116 iso_pu_bacteria 2517287029 2517409650 420
117 iso_pu_bacteria 2718217882 2719182416 420
118 iso_pu_bacteria 2718217927 2719388920 420
119 iso_pu_bacteria 2718217997 2719668424 420
120 iso_pu_bacteria 2718218009 2719733135 420
121 iso_pu_bacteria 2718218199 2720489117 420
122 iso_pu_bacteria 2718218232 2720609809 420
123 iso_pu_bacteria 2718218233 2720617240 420
124 iso_pu_bacteria 2718218235 2720628381 420
125 iso_pu_bacteria 2718218269 2720772336 420
126 iso_pu_bacteria 2718218363 2721148529 420
127 iso_pu_bacteria 2718218365 2721159914 420
128 iso_pu_bacteria 2718218366 2721165343 420
129 iso_pu_bacteria 2718218423 2721402762 420
130 iso_pu_bacteria 2721755514 2722841513 420
131 iso_pu_bacteria 2721755556 2723029756 420
132 iso_pu_bacteria 2721755684 2723564125 420
133 iso_pu_bacteria 2721755685 2723570181 420
134 iso_pu_bacteria 2721755809 2724034828 420
135 iso_pu_bacteria 2721755810 2724045891 420
136 iso_pu_bacteria 2721755819 2724092365 420
137 iso_pu_bacteria 2721755822 2724101728 420
138 iso_pu_bacteria 2721755823 2724112740 420
139 iso_pu_bacteria 2728369352 2730110289 420
140 iso_pu_bacteria 2728369365 2730165651 420
141 iso_pu_bacteria 2728369397 2730299546 420
142 iso_pu_bacteria 2773857925 2774868976 420
143 iso_pu_bacteria 2791355256 2793297404 420
144 iso_pu_bacteria 2791355260 2793319911 420
145 iso_pu_bacteria 2791355262 2793336561 420
146 iso_pu_bacteria 2791355264 2793347184 420
147 iso_pu_bacteria 2791355265 2793354824 420
148 iso_pu_bacteria 2802429605 2805927028 420
149 iso_pu_bacteria 2802429606 2805936356 420
150 iso_pu_bacteria 2838016132 2838016360 420
151 iso_pu_bacteria 2838061910 2838065258 420
152 iso_pu_bacteria 2838068647 2838068895 420
153 iso_pu_bacteria 2838668709 2838669671 420
154 iso_pu_bacteria 2838701080 2838702043 420
155 iso_pu_bacteria 2842192696 2842196549 420
156 iso_pu_bacteria 2842198810 2842200030 420
157 iso_pu_bacteria 2842205361 2842209387 420
158 iso_pu_bacteria 2842250916 2842251534 420
159 iso_pu_bacteria 2842264693 2842265233 420
160 iso_pu_bacteria 2842278818 2842282569 420
161 iso_pu_bacteria 2842311132 2842315874 420
162 iso_pu_bacteria 2842317721 2842322697 420
163 iso_pu_bacteria 2842422224 2842423041 420
164 iso_pu_bacteria 2842428310 2842428714 420
165 iso_pu_bacteria 2842434925 2842435327 420
166 iso_pu_bacteria 2842441272 2842441810 420
167 iso_pu_bacteria 2842447887 2842448146 420
168 iso_pu_bacteria 2842462802 2842463138 420
169 iso_pu_bacteria 2842469257 2842469658 420
170 iso_pu_bacteria 2842489311 2842489510 420
171 iso_pu_bacteria 2842495871 2842500343 420
172 iso_pu_bacteria 2857516855 2857521322 420
173 iso_pu_bacteria 2882456835 2882457456 420
174 iso_pu_bacteria 2894232714 2894240666 420
175 iso_pu_bacteria 2933599457 2933599563 420
176 iso_pu_bacteria 2936367885 2936371219 420
177 iso_pu_bacteria 2936375103 2936375578 420
178 iso_pu_bacteria 8005275841 8005276338 420
179 iso_pu_bacteria 8005282627 8005288737 420
180 iso_pu_bacteria 8005289223 8005295430 420
181 iso_pu_bacteria 8005301065 8005306877 420
182 iso_pu_bacteria 8005376324 8005380158 420
183 iso_pu_bacteria 8005382845 8005384269 420
184 iso_pu_bacteria 8005395548 8005401620 420
185 iso_pu_bacteria 8005430974 8005431800 420
186 iso_pu_bacteria 8005497431 8005502631 420
187 iso_pu_bacteria 8005619151 8005623839 420
188 iso_pu_bacteria 8005626139 8005629095 420
189 iso_pu_bacteria 8005668836 8005674060 420
190 iso_pu_bacteria 8005688590 8005693376 420
191 iso_pu_bacteria 8018176218 8018180359 420
192 iso_pu_bacteria 8024501048 8024503694 420
193 iso_pu_bacteria 8056382006 8056382389 420
194 3300010375 Ga0105239_10047764 Ga0105239_100477643 421
195 3300031241 Ga0265325_10010470 Ga0265325_100104702 421
196 3300031249 Ga0265339_10000836 Ga0265339_1000083611 421
197 3300037312 Ga0395899_0101329 Ga0395899_0101329_315_1634 421
198 3300037418 Ga0395900_0179165 Ga0395900_0179165_292_1611 421
199 iso_pu_bacteria 2615840624 2616294375 421
200 iso_pu_bacteria 8018127388 8018134693 421
201 3300049824 Ga0501045_0149149 Ga0501045_0149149_142_1545 422
202 3300050510 nmdc:mga06r32_23694_c1 nmdc:mga06r32_23694_c1_3422_4765 422
203 3300005444 Ga0070694_100204383 Ga0070694_1002043831 423
204 3300006852 Ga0075433_10131549 Ga0075433_101315492 423
205 3300006914 Ga0075436_100116941 Ga0075436_1001169412 423
206 3300009147 Ga0114129_10005244 Ga0114129_1000524410 423
207 3300009147 Ga0114129_10439085 Ga0114129_104390852 423
208 3300050507 nmdc:mga05p37_17017_c1 nmdc:mga05p37_17017_c1_3923_5206 423
209 3300050512 nmdc:mga0n895_325694_c1 nmdc:mga0n895_325694_c1_109_1392 423
210 3300050514 nmdc:mga08x19_105759_c1 nmdc:mga08x19_105759_c1_463_1746 423
211 3300050515 nmdc:mga0a205_201542_c1 nmdc:mga0a205_201542_c1_505_1788 423
212 3300005467 Ga0070706_100008718 Ga0070706_1000087189 425
213 3300005467 Ga0070706_100022077 Ga0070706_1000220774 425
214 3300005468 Ga0070707_100001344 Ga0070707_1000013443 425
215 3300005471 Ga0070698_100005981 Ga0070698_1000059814 425
216 3300005518 Ga0070699_100012210 Ga0070699_1000122105 425
217 3300005617 Ga0068859_100002658 Ga0068859_1000026586 425
218 3300005618 Ga0068864_100308033 Ga0068864_1003080331 425
219 3300005843 Ga0068860_100010558 Ga0068860_1000105586 425
220 3300006931 Ga0097620_100002658 Ga0097620_1000026586 425
221 3300009177 Ga0105248_10133925 Ga0105248_101339251 425
222 3300025910 Ga0207684_10007099 Ga0207684_100070994 425
223 3300025918 Ga0207662_10108776 Ga0207662_101087761 425
224 3300025922 Ga0207646_10003447 Ga0207646_100034473 425
225 3300025940 Ga0207691_10006543 Ga0207691_1000654310 425
226 3300049568 Ga0501031_0082526 Ga0501031_0082526_320_1666 425
227 3300049569 Ga0501032_0028506 Ga0501032_0028506_983_2329 425
228 3300049570 Ga0501033_0048929 Ga0501033_0048929_322_1668 425
229 3300049571 Ga0501034_0049484 Ga0501034_0049484_2380_3726 425
230 3300049571 Ga0501034_0080778 Ga0501034_0080778_488_1834 425
231 3300049572 Ga0501036_0012173 Ga0501036_0012173_4030_5376 425
232 3300049573 Ga0501037_0074200 Ga0501037_0074200_278_1624 425
233 3300049574 Ga0501038_0017741 Ga0501038_0017741_1643_2989 425
234 3300049574 Ga0501038_0061356 Ga0501038_0061356_342_1688 425
235 3300049575 Ga0501039_0081878 Ga0501039_0081878_649_1995 425
236 3300049579 Ga0501043_0015873 Ga0501043_0015873_3202_4548 425
237 3300049580 Ga0501046_0023571 Ga0501046_0023571_2133_3479 425
238 3300049580 Ga0501046_0030978 Ga0501046_0030978_1227_2573 425
239 3300049581 Ga0501047_0015435 Ga0501047_0015435_2778_4124 425
240 3300049581 Ga0501047_0026091 Ga0501047_0026091_149_1495 425
241 3300049583 Ga0501067_0002873 Ga0501067_0002873_2781_4127 425
242 3300049583 Ga0501067_0056442 Ga0501067_0056442_328_1674 425
243 3300049584 Ga0501068_0007003 Ga0501068_0007003_1603_2949 425
244 3300049585 Ga0501069_0040499 Ga0501069_0040499_507_1853 425
245 3300049586 Ga0501070_0176747 Ga0501070_0176747_60_1406 425
246 3300049588 Ga0501072_0020095 Ga0501072_0020095_2971_4317 425
247 3300049589 Ga0501073_0011751 Ga0501073_0011751_3228_4574 425
248 3300049589 Ga0501073_0115385 Ga0501073_0115385_53_1399 425
249 3300049742 Ga0501080_0126349 Ga0501080_0126349_370_1716 425
250 3300049742 Ga0501080_0149741 Ga0501080_0149741_310_1656 425
251 3300049823 Ga0501044_0011273 Ga0501044_0011273_7329_8675 425
252 3300049823 Ga0501044_0021369 Ga0501044_0021369_2567_3913 425
253 3300049823 Ga0501044_0030407 Ga0501044_0030407_374_1720 425
254 3300049823 Ga0501044_0117150 Ga0501044_0117150_1165_2511 425
255 3300053103 Ga0500555_000202 Ga0500555_000202_3433_4725 425
256 3300053153 Ga0500616_0001764 Ga0500616_0001764_16957_18249 425
257 3300053730 Ga0500645_000636 Ga0500645_000636_805_2097 425
258 3300054114 Ga0501084_0059992 Ga0501084_0059992_1297_2643 425
259 3300003203 JGI25406J46586_10000821 JGI25406J46586_100008219 426
260 3300003203 JGI25406J46586_10001120 JGI25406J46586_100011207 426
261 3300005985 Ga0081539_10000029 Ga0081539_10000029239 426
262 3300005985 Ga0081539_10000036 Ga0081539_10000036107 426
263 3300013306 Ga0163162_10032599 Ga0163162_100325992 426
264 3300031548 Ga0307408_100039921 Ga0307408_1000399213 426
265 3300031852 Ga0307410_10164220 Ga0307410_101642202 426
266 3300031903 Ga0307407_10041172 Ga0307407_100411722 426
267 3300032005 Ga0307411_10030557 Ga0307411_100305573 426
268 3300060353 Ga0501082_0203899 Ga0501082_0203899_190_1578 426

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01565

FAD_binding_4

FAD binding domain

58

184

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
4g3u-assembly1.cif.gz_A mycobacterium smegmatis dpre1 - monoclinic crystal form 0.8902 51 424
4feh-assembly1.cif.gz_A mycobacterium tuberculosis dpre1 - hexagonal crystal form 0.8873 8 424
4p8m-assembly2.cif.gz_B crystal structure of m. tuberculosis dpre1 in complex with the non-covalent inhibitor qn114 0.8873 8 424
4fdn-assembly1.cif.gz_A mycobacterium tuberculosis dpre1 in complex with ct325 - hexagonal crystal form 0.8843 8 424
4pfd-assembly2.cif.gz_B crystal structure of m. tuberculosis in complex with a cbt - non-covalent adduct 0.8837 8 424
ID Description Score Start End Superfamily
af_P9WJF1_85_203_3.30.465.10 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; 0.9669 59 169 3.30.465.10
af_Q2RAP0_154_280_3.30.465.10 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; 0.9395 53 165 3.30.465.10
af_A0A1D6QA56_22_150_3.30.465.10 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; 0.9362 53 166 3.30.465.10
af_I1LPL0_118_272_3.30.465.10 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; 0.9362 54 166 3.30.465.10
af_Q4ADV8_142_254_3.30.465.10 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; 0.9357 52 164 3.30.465.10
ID Description Score Start End GO Terms
AF-A0A534THV4-F1-model_v4 FAD-binding oxidoreductase 0.9587 23 424 GO:0016899
GO:0071949
AF-A0A3L7SH86-F1-model_v4 FAD-binding oxidoreductase 0.9577 57 424 GO:0003885
GO:0016020
GO:0071949
AF-A0A7C4UXC4-F1-model_v4 FAD-binding oxidoreductase 0.9534 6 424 GO:0003885
GO:0016020
GO:0071949
AF-A0A3D3QEX0-F1-model_v4 deleted 0.9531 117 224
AF-A0A534THV4-F1-model_v4 FAD-binding oxidoreductase 0.9514 23 424 GO:0016899
GO:0071949

Feature Viewer

pLDDT pTM Quality
90.19 0.91 High
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Predicted Structure (AlphaFold2)

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