F372985

General Info

Members Datasets Scaffolds Average Seq Length
264 155 253 263

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2899803654|2899807414
Length 259
Sequence TWNINGVKARIANLCQWLESSAPDIVCLQEIKSVDEGFPRAEIEALGYHVETHGQKGFNGVALLSKLRPDEINRGLPGDDADEQARFIEGVFSVQGGVLRVCSLYLPNGNPPDDPVKYPYKLAWMERLQRFAENRLALEEPFILAGDYNVIPQPHDCHDPAVWAGDALFLPTTRQAFQRLESLGLTDAVRATCDTVPLYSFWDYQAGAWQKNNGIRIDHLLLSPEAADRLQSAQIEKHVRSWEKPSDHVPVTARFDFAA

Samples

Sample ID Description Type Environment
1 2558860983 Allorhizobium undicola ATCC 700741 Isolate Rhizoplane
2 2643221580 Devosia sp. Root635 Isolate Unclassified
3 2643221591 Devosia sp. Root685 Isolate Unclassified
4 2643221651 Afipia sp. Root123D2 Isolate Unclassified
5 2643221674 Devosia sp. Root436 Isolate Unclassified
6 2837651117 Pseudohoeflea suaedae YC6898 Isolate Unclassified
7 2899803654 Agrobacterium sp. a22-2 Isolate Unclassified
8 2909042592 Labrys sp. LIt4 Isolate Nodule
9 2932401849 Devosia sp. 2618 Isolate Rhizosphere
10 2939669807 Kaistia defluvii 3207 Isolate Rhizosphere
11 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
12 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
13 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
14 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
15 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
16 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
20 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
21 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
22 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
23 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
31 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
32 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
33 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
34 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
35 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
36 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
37 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
38 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
39 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
40 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
41 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
48 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
49 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
50 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
51 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
52 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
53 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
76 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
77 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
78 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
79 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
80 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
81 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
82 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
83 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
84 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
85 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
86 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
87 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
88 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
89 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
90 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
91 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
92 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
93 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
94 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
95 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
96 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
97 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
98 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
99 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
100 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
101 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
102 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
103 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
104 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
105 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
106 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
120 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
121 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
122 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
123 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
124 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
125 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
126 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
127 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
128 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
129 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
130 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
133 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
134 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
135 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
136 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
137 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
138 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
139 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
140 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
141 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
142 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
143 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
144 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
145 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
146 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
147 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
148 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
149 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
150 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
151 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
152 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
153 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
154 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
155 8045864390 Aurantimonas endophytica KCTC 52296 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.45
Metatranscriptomes 0.38
Isolates 4.17

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.23
Nodule 0.38
Rhizoplane 1.14
Rhizosphere 81.82
Stem 0
Stem Tuber 0
Unclassified 6.44

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10022604 3300001989 Bacteria 2230
2 Ga0070658_10112356 3300005327 Bacteria 2258
3 Ga0070658_10447695 3300005327 Bacteria 1112
4 Ga0070666_10298759 3300005335 Bacteria 1146
5 Ga0070680_100106246 3300005336 Bacteria 2334
6 Ga0070660_100084520 3300005339 Bacteria 2494
7 Ga0070660_100274898 3300005339 Bacteria 1378
8 Ga0070668_100020845 3300005347 Bacteria 4951
9 Ga0070659_100141866 3300005366 Bacteria 1956
10 Ga0070667_100165669 3300005367 Bacteria 1949
11 Ga0070709_10035347 3300005434 Bacteria 3036
12 Ga0070714_100010679 3300005435 Bacteria 7266
13 Ga0070713_100032785 3300005436 Bacteria 4153
14 Ga0070711_100082910 3300005439 Bacteria 2289
15 Ga0070663_100222393 3300005455 Bacteria 1483
16 Ga0070663_100295524 3300005455 Bacteria 1295
17 Ga0070679_100149828 3300005530 Bacteria 2310
18 Ga0070679_100381372 3300005530 Bacteria 1356
19 Ga0068853_100355997 3300005539 Bacteria 1362
20 Ga0068855_100055693 3300005563 Bacteria 4643
21 Ga0068855_100263189 3300005563 Bacteria 1920
22 Ga0068855_100381787 3300005563 Bacteria 1547
23 Ga0068857_100016730 3300005577 Bacteria 6424
24 Ga0068854_100063321 3300005578 Bacteria 2684
25 Ga0068856_100098004 3300005614 Bacteria 2922
26 Ga0068856_100729896 3300005614 Bacteria 1011
27 Ga0068860_100029848 3300005843 Bacteria 5246
28 Ga0075365_10006088 3300006038 Bacteria 6591
29 Ga0075363_100032927 3300006048 Bacteria 2696
30 Ga0075364_10029280 3300006051 Bacteria 3531
31 Ga0075367_10072847 3300006178 Bacteria 2069
32 Ga0075369_10022640 3300006186 Bacteria 2593
33 Ga0075428_100049507 3300006844 Bacteria 4610
34 Ga0075430_100009979 3300006846 Bacteria 8034
35 Ga0075431_100002581 3300006847 Bacteria 17505
36 Ga0075429_100014043 3300006880 Bacteria 6941
37 Ga0105240_10040895 3300009093 Bacteria 5923
38 Ga0111539_10003260 3300009094 Bacteria 21453
39 Ga0114129_10001565 3300009147 Bacteria 31048
40 Ga0105241_10378608 3300009174 Bacteria 1236
41 Ga0105237_10000172 3300009545 Bacteria 90675
42 Ga0105237_10157003 3300009545 Bacteria 2272
43 Ga0105237_10408543 3300009545 Bacteria 1362
44 Ga0105238_10026494 3300009551 Bacteria 5911
45 Ga0105239_10003701 3300010375 Bacteria 18617
46 Ga0105239_10055696 3300010375 Bacteria 4337
47 Ga0157371_10029253 3300013102 Bacteria 3987
48 Ga0157372_10169977 3300013307 Unclassified 2522
49 Ga0163163_10013017 3300014325 Bacteria 7598
50 Ga0182005_1007098 3300015265 Bacteria 3381
51 Ga0207427_101789 3300025231 Bacteria 6948
52 Ga0209233_1000710 3300025261 Bacteria 15543
53 Ga0209233_1029645 3300025261 Bacteria 1298
54 Ga0207680_10317226 3300025903 Bacteria 1089
55 Ga0207647_10013255 3300025904 Bacteria 5721
56 Ga0207699_10013393 3300025906 Bacteria 4196
57 Ga0207699_10076669 3300025906 Bacteria 2060
58 Ga0207705_10005690 3300025909 Bacteria 9310
59 Ga0207705_10030523 3300025909 Bacteria 3846
60 Ga0207705_10109707 3300025909 Bacteria 2038
61 Ga0207695_10068724 3300025913 Bacteria 3629
62 Ga0207671_10001685 3300025914 Bacteria 25022
63 Ga0207663_10036961 3300025916 Bacteria 2941
64 Ga0207660_10428136 3300025917 Bacteria 1068
65 Ga0207657_10046175 3300025919 Bacteria 3816
66 Ga0207652_10132170 3300025921 Bacteria 2227
67 Ga0207694_10023997 3300025924 Bacteria 4632
68 Ga0207700_10167985 3300025928 Bacteria 1827
69 Ga0207664_10144850 3300025929 Bacteria 2013
70 Ga0207667_10023316 3300025949 Bacteria 6816
71 Ga0207667_10033321 3300025949 Bacteria 5540
72 Ga0207667_10038373 3300025949 Bacteria 5117
73 Ga0207667_10194981 3300025949 Bacteria 2078
74 Ga0207668_10036217 3300025972 Bacteria 3292
75 Ga0207640_10056563 3300025981 Bacteria 2576
76 Ga0207640_10466388 3300025981 Bacteria 1044
77 Ga0207658_10115031 3300025986 Bacteria 2134
78 Ga0207639_10002452 3300026041 Bacteria 12441
79 Ga0207639_10026141 3300026041 Bacteria 4240
80 Ga0207678_10036293 3300026067 Bacteria 4291
81 Ga0207678_10304086 3300026067 Bacteria 1371
82 Ga0207702_10045975 3300026078 Bacteria 3673
83 Ga0207702_10600665 3300026078 Bacteria 1080
84 Ga0207674_10028639 3300026116 Bacteria 5875
85 Ga0207674_10432947 3300026116 Bacteria 1271
86 Ga0268266_10001618 3300028379 Bacteria 26267
87 Ga0265325_10000055 3300031241 Bacteria 77409
88 Ga0265325_10044803 3300031241 Bacteria 2302
89 Ga0265340_10032619 3300031247 Bacteria 2599
90 Ga0265339_10001686 3300031249 Bacteria 16305
91 Ga0265331_10023613 3300031250 Bacteria 3122
92 Ga0265316_10093016 3300031344 Bacteria 2298
93 Ga0265316_10158785 3300031344 Bacteria 1691
94 Ga0307408_100022230 3300031548 Bacteria 4307
95 Ga0265313_10020283 3300031595 Bacteria 3670
96 Ga0265313_10021836 3300031595 Bacteria 3489
97 Ga0265314_10002282 3300031711 Bacteria 19846
98 Ga0265314_10012308 3300031711 Bacteria 6990
99 Ga0265314_10191231 3300031711 Bacteria 1218
100 Ga0307516_10027854 3300031730 Bacteria 5726
101 Ga0307414_10020286 3300032004 Bacteria 4140
102 Ga0307414_10223768 3300032004 Bacteria 1546
103 Ga0307414_10243792 3300032004 Bacteria 1489
104 Ga0307414_10493478 3300032004 Bacteria 1082
105 Ga0316593_10015743 3300032168 Bacteria 2281
106 Ga0373943_0109277 3300035170 Bacteria 1456
107 Ga0373927_0328497 3300035695 Bacteria 1007
108 Ga0373947_0300615 3300035725 Bacteria 1070
109 Ga0373925_0138049 3300037068 Bacteria 1906
110 Ga0395899_0007549 3300037312 Bacteria 8397
111 Ga0395900_0094682 3300037418 Bacteria 3068
112 Ga0395898_0002807 3300037466 Bacteria 19970
113 Ga0395898_0119946 3300037466 Bacteria 2520
114 Ga0395898_0844686 3300037466 Bacteria 855
115 Ga0395905_0358071 3300037471 Bacteria 1352
116 Ga0395901_0021733 3300038443 Bacteria 6574
117 Ga0395901_0409191 3300038443 Bacteria 1393
118 Ga0395901_0519676 3300038443 Bacteria 1210
119 Ga0395901_0566196 3300038443 Bacteria 1150
120 Ga0439465_0043727 3300041413 Bacteria 1454
121 Ga0466957_0200436 3300044842 Bacteria 1311
122 Ga0495672_0043496 3300047320 Bacteria 2700
123 Ga0496107_0045255 3300048910 Bacteria 3165
124 Ga0496110_0262499 3300048913 Bacteria 1572
125 Ga0496118_0073755 3300048921 Bacteria 2443
126 Ga0496120_0010024 3300048923 Bacteria 6654
127 Ga0496120_0116935 3300048923 Bacteria 1384
128 Ga0496121_0000612 3300048924 Bacteria 66397
129 Ga0496124_0498200 3300048927 Bacteria 817
130 Ga0496125_0000217 3300048928 Bacteria 117498
131 Ga0496126_0021125 3300048929 Bacteria 6366
132 Ga0496126_0021656 3300048929 Bacteria 6274
133 Ga0496126_0317753 3300048929 Bacteria 1281
134 Ga0501031_0017275 3300049568 Bacteria 4688
135 Ga0501032_0025126 3300049569 Bacteria 4107
136 Ga0501032_0137417 3300049569 Bacteria 1611
137 Ga0501033_0000098 3300049570 Bacteria 82803
138 Ga0501033_0008987 3300049570 Bacteria 7714
139 Ga0501033_0015666 3300049570 Bacteria 5747
140 Ga0501033_0038690 3300049570 Bacteria 3564
141 Ga0501033_0064894 3300049570 Bacteria 2686
142 Ga0501033_0152405 3300049570 Bacteria 1667
143 Ga0501033_0200017 3300049570 Bacteria 1427
144 Ga0501034_0001102 3300049571 Bacteria 37998
145 Ga0501034_0001272 3300049571 Bacteria 34179
146 Ga0501034_0051892 3300049571 Bacteria 4134
147 Ga0501034_0092603 3300049571 Bacteria 3019
148 Ga0501034_0253336 3300049571 Bacteria 1704
149 Ga0501036_0000049 3300049572 Bacteria 75400
150 Ga0501036_0060341 3300049572 Bacteria 3213
151 Ga0501036_0101791 3300049572 Bacteria 2430
152 Ga0501037_0000069 3300049573 Bacteria 95277
153 Ga0501037_0000753 3300049573 Bacteria 24482
154 Ga0501037_0373123 3300049573 Bacteria 981
155 Ga0501038_0000034 3300049574 Bacteria 128854
156 Ga0501038_0037063 3300049574 Bacteria 4278
157 Ga0501038_0281534 3300049574 Bacteria 1309
158 Ga0501039_0000090 3300049575 Bacteria 63919
159 Ga0501042_0314326 3300049578 Bacteria 1132
160 Ga0501043_0000031 3300049579 Bacteria 140707
161 Ga0501043_0000130 3300049579 Bacteria 69795
162 Ga0501043_0032843 3300049579 Bacteria 4082
163 Ga0501046_0000213 3300049580 Bacteria 60602
164 Ga0501046_0034446 3300049580 Bacteria 4086
165 Ga0501047_0001193 3300049581 Bacteria 25735
166 Ga0501047_0002568 3300049581 Bacteria 17330
167 Ga0501047_0020091 3300049581 Bacteria 6414
168 Ga0501047_0029141 3300049581 Bacteria 5323
169 Ga0501047_0308779 3300049581 Bacteria 1423
170 Ga0501048_0001548 3300049582 Bacteria 17463
171 Ga0501048_0173969 3300049582 Bacteria 1526
172 Ga0501067_0001256 3300049583 Bacteria 13799
173 Ga0501068_0000197 3300049584 Bacteria 28590
174 Ga0501068_0205186 3300049584 Bacteria 1251
175 Ga0501069_0000362 3300049585 Bacteria 20433
176 Ga0501069_0002104 3300049585 Bacteria 10029
177 Ga0501070_0003800 3300049586 Bacteria 13038
178 Ga0501070_0006517 3300049586 Bacteria 9928
179 Ga0501070_0007315 3300049586 Bacteria 9377
180 Ga0501070_0009992 3300049586 Bacteria 8026
181 Ga0501070_0059516 3300049586 Bacteria 3167
182 Ga0501070_0128790 3300049586 Bacteria 2091
183 Ga0501070_0150621 3300049586 Bacteria 1919
184 Ga0501070_0211911 3300049586 Bacteria 1590
185 Ga0501071_0026819 3300049587 Bacteria 4048
186 Ga0501071_0410072 3300049587 Bacteria 1035
187 Ga0501072_0000146 3300049588 Bacteria 52958
188 Ga0501072_0290398 3300049588 Bacteria 1300
189 Ga0501072_0329849 3300049588 Bacteria 1212
190 Ga0501073_0029277 3300049589 Bacteria 3935
191 Ga0501073_0065230 3300049589 Bacteria 2539
192 Ga0501073_0117905 3300049589 Bacteria 1840
193 Ga0501073_0180756 3300049589 Bacteria 1460
194 Ga0501074_0001890 3300049590 Bacteria 14387
195 Ga0501074_0004186 3300049590 Bacteria 10310
196 Ga0501079_0043351 3300049741 Bacteria 3472
197 Ga0501079_0450118 3300049741 Bacteria 1011
198 Ga0501080_0000379 3300049742 Bacteria 34215
199 Ga0501080_0013625 3300049742 Bacteria 7487
200 Ga0501080_0016292 3300049742 Bacteria 6862
201 Ga0501080_0128246 3300049742 Bacteria 2348
202 Ga0501083_0001104 3300049744 Bacteria 18056
203 Ga0501083_0001109 3300049744 Bacteria 18027
204 Ga0501083_0102595 3300049744 Bacteria 1886
205 Ga0501035_0000036 3300049822 Bacteria 165008
206 Ga0501035_0003490 3300049822 Bacteria 15036
207 Ga0501035_0008600 3300049822 Bacteria 9499
208 Ga0501035_0018367 3300049822 Bacteria 6444
209 Ga0501035_0046884 3300049822 Bacteria 3884
210 Ga0501035_0051191 3300049822 Bacteria 3698
211 Ga0501035_0068793 3300049822 Bacteria 3139
212 Ga0501035_0116926 3300049822 Bacteria 2333
213 Ga0501044_0000011 3300049823 Bacteria 257385
214 Ga0501044_0004850 3300049823 Bacteria 15038
215 Ga0501044_0023247 3300049823 Bacteria 6595
216 Ga0501044_0052430 3300049823 Bacteria 4203
217 Ga0501044_0107284 3300049823 Bacteria 2804
218 Ga0501044_0116967 3300049823 Bacteria 2670
219 Ga0501044_0186375 3300049823 Bacteria 2039
220 Ga0501044_0246920 3300049823 Bacteria 1727
221 Ga0501044_0306721 3300049823 Bacteria 1515
222 Ga0501044_0376515 3300049823 Bacteria 1335
223 Ga0501044_0625875 3300049823 Bacteria 967
224 Ga0501045_0025834 3300049824 Bacteria 4222
225 Ga0501045_0230770 3300049824 Bacteria 1378
226 nmdc:mga03n38_78534_c1 3300050490 Bacteria 1545
227 nmdc:mga00v17_29217_c1 3300050491 Bacteria 3234
228 nmdc:mga06z11_49730_c1 3300050494 Bacteria 2140
229 nmdc:mga05p37_14_c1 3300050507 Bacteria 137209
230 nmdc:mga09592_3973_c1 3300050508 Bacteria 11911
231 nmdc:mga0qj67_94929_c1 3300050509 Bacteria 2400
232 nmdc:mga06r32_1943_c1 3300050510 Bacteria 18422
233 nmdc:mga0sz30_144805_c1 3300050516 Bacteria 1050
234 Ga0500643_005624 3300053087 Bacteria 5366
235 Ga0500644_0003835 3300053088 Bacteria 3737
236 Ga0500651_0047548 3300053093 Bacteria 2696
237 Ga0500566_0014436 3300053094 Bacteria 4644
238 Ga0500566_0037092 3300053094 Bacteria 2825
239 Ga0500595_000139 3300053119 Bacteria 47423
240 Ga0500568_0025069 3300053139 Bacteria 2520
241 Ga0500568_0038017 3300053139 Bacteria 1950
242 Ga0500604_0000059 3300053151 Bacteria 39804
243 Ga0500604_0016664 3300053151 Bacteria 2027
244 Ga0500616_0000006 3300053153 Bacteria 944738
245 Ga0500634_0000004 3300053161 Bacteria 214946
246 Ga0500636_0017425 3300053177 Bacteria 4242
247 Ga0500645_000502 3300053730 Bacteria 26442
248 Ga0500645_037836 3300053730 Bacteria 1432
249 Ga0501084_0002564 3300054114 Bacteria 14640
250 Ga0501082_0003475 3300060353 Bacteria 13745
251 Ga0501082_0031201 3300060353 Bacteria 4594
252 Ga0501082_0206288 3300060353 Bacteria 1710
253 Ga0466962_0032354 3300061719 Bacteria 2504

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048923 Ga0496120_0116935 Ga0496120_0116935_16_720 234
2 3300053093 Ga0500651_0047548 Ga0500651_0047548_761_1510 249
3 3300053153 Ga0500616_0000006 Ga0500616_0000006_885752_886501 249
4 3300053730 Ga0500645_037836 Ga0500645_037836_220_969 249
5 3300053094 Ga0500566_0014436 Ga0500566_0014436_2482_3243 253
6 3300053177 Ga0500636_0017425 Ga0500636_0017425_853_1614 253
7 iso_pu_bacteria 2643221580 2643912437 255
8 iso_pu_bacteria 2643221674 2644410757 255
9 iso_pu_bacteria 2932401849 2932403496 255
10 iso_pu_bacteria 8045864390 8045865151 255
11 iso_pu_bacteria 2558860983 2561468945 256
12 iso_pu_bacteria 2837651117 2837652938 256
13 iso_pu_bacteria 2939669807 2939670960 256
14 iso_pu_bacteria 2643221591 2643963214 257
15 iso_pu_bacteria 2909042592 2909045887 257
16 iso_pu_bacteria 2899803654 2899807414 258
17 3300005327 Ga0070658_10447695 Ga0070658_104476952 259
18 3300005339 Ga0070660_100274898 Ga0070660_1002748982 259
19 3300005347 Ga0070668_100020845 Ga0070668_1000208453 259
20 3300005366 Ga0070659_100141866 Ga0070659_1001418662 259
21 3300005367 Ga0070667_100165669 Ga0070667_1001656692 259
22 3300005455 Ga0070663_100222393 Ga0070663_1002223931 259
23 3300005530 Ga0070679_100149828 Ga0070679_1001498282 259
24 3300005539 Ga0068853_100355997 Ga0068853_1003559972 259
25 3300009545 Ga0105237_10000172 Ga0105237_1000017265 259
26 3300010375 Ga0105239_10003701 Ga0105239_100037016 259
27 3300025231 Ga0207427_101789 Ga0207427_1017893 259
28 3300025261 Ga0209233_1000710 Ga0209233_10007105 259
29 3300025261 Ga0209233_1029645 Ga0209233_10296452 259
30 3300025909 Ga0207705_10005690 Ga0207705_100056909 259
31 3300025914 Ga0207671_10001685 Ga0207671_1000168529 259
32 3300025919 Ga0207657_10046175 Ga0207657_100461751 259
33 3300025921 Ga0207652_10132170 Ga0207652_101321702 259
34 3300025949 Ga0207667_10023316 Ga0207667_100233163 259
35 3300025972 Ga0207668_10036217 Ga0207668_100362173 259
36 3300025986 Ga0207658_10115031 Ga0207658_101150312 259
37 3300026041 Ga0207639_10002452 Ga0207639_1000245213 259
38 3300026067 Ga0207678_10036293 Ga0207678_100362933 259
39 3300028379 Ga0268266_10001618 Ga0268266_1000161816 259
40 3300031730 Ga0307516_10027854 Ga0307516_100278542 259
41 3300032004 Ga0307414_10020286 Ga0307414_100202862 259
42 3300032004 Ga0307414_10223768 Ga0307414_102237682 259
43 3300032004 Ga0307414_10243792 Ga0307414_102437921 259
44 3300032004 Ga0307414_10493478 Ga0307414_104934782 259
45 3300037466 Ga0395898_0119946 Ga0395898_0119946_462_1241 259
46 3300038443 Ga0395901_0409191 Ga0395901_0409191_509_1288 259
47 3300038443 Ga0395901_0566196 Ga0395901_0566196_235_1014 259
48 3300048913 Ga0496110_0262499 Ga0496110_0262499_195_980 259
49 3300048927 Ga0496124_0498200 Ga0496124_0498200_16_801 259
50 3300048928 Ga0496125_0000217 Ga0496125_0000217_48022_48807 259
51 3300048929 Ga0496126_0021125 Ga0496126_0021125_550_1329 259
52 3300049570 Ga0501033_0200017 Ga0501033_0200017_153_932 259
53 3300049571 Ga0501034_0001102 Ga0501034_0001102_23489_24268 259
54 3300049571 Ga0501034_0092603 Ga0501034_0092603_1317_2096 259
55 3300049571 Ga0501034_0253336 Ga0501034_0253336_849_1628 259
56 3300049572 Ga0501036_0060341 Ga0501036_0060341_300_1079 259
57 3300049574 Ga0501038_0281534 Ga0501038_0281534_487_1266 259
58 3300049579 Ga0501043_0032843 Ga0501043_0032843_2494_3273 259
59 3300049581 Ga0501047_0002568 Ga0501047_0002568_14603_15382 259
60 3300049581 Ga0501047_0308779 Ga0501047_0308779_332_1114 259
61 3300049586 Ga0501070_0003800 Ga0501070_0003800_11113_11892 259
62 3300049586 Ga0501070_0211911 Ga0501070_0211911_782_1564 259
63 3300049822 Ga0501035_0003490 Ga0501035_0003490_2238_3017 259
64 3300049822 Ga0501035_0068793 Ga0501035_0068793_740_1519 259
65 3300049823 Ga0501044_0625875 Ga0501044_0625875_159_938 259
66 3300053151 Ga0500604_0000059 Ga0500604_0000059_6333_7112 259
67 3300053161 Ga0500634_0000004 Ga0500634_0000004_5941_6792 259
68 iso_pu_bacteria 2643221651 2644288431 259
69 3300005435 Ga0070714_100010679 Ga0070714_1000106796 260
70 3300005843 Ga0068860_100029848 Ga0068860_1000298481 260
71 3300006186 Ga0075369_10022640 Ga0075369_100226403 260
72 3300009545 Ga0105237_10157003 Ga0105237_101570032 260
73 3300014325 Ga0163163_10013017 Ga0163163_100130173 260
74 3300015265 Ga0182005_1007098 Ga0182005_10070983 260
75 3300025906 Ga0207699_10076669 Ga0207699_100766692 260
76 3300025929 Ga0207664_10144850 Ga0207664_101448502 260
77 3300031250 Ga0265331_10023613 Ga0265331_100236131 260
78 3300031711 Ga0265314_10191231 Ga0265314_101912312 260
79 3300032168 Ga0316593_10015743 Ga0316593_100157434 260
80 3300035170 Ga0373943_0109277 Ga0373943_0109277_604_1386 260
81 3300035695 Ga0373927_0328497 Ga0373927_0328497_201_983 260
82 3300035725 Ga0373947_0300615 Ga0373947_0300615_64_846 260
83 3300037068 Ga0373925_0138049 Ga0373925_0138049_982_1764 260
84 3300037418 Ga0395900_0094682 Ga0395900_0094682_184_966 260
85 3300038443 Ga0395901_0021733 Ga0395901_0021733_4896_5678 260
86 3300049570 Ga0501033_0064894 Ga0501033_0064894_58_840 260
87 3300049570 Ga0501033_0152405 Ga0501033_0152405_846_1628 260
88 3300049571 Ga0501034_0051892 Ga0501034_0051892_257_1039 260
89 3300049572 Ga0501036_0101791 Ga0501036_0101791_168_950 260
90 3300049581 Ga0501047_0029141 Ga0501047_0029141_3673_4455 260
91 3300049582 Ga0501048_0173969 Ga0501048_0173969_732_1514 260
92 3300049584 Ga0501068_0205186 Ga0501068_0205186_63_845 260
93 3300049588 Ga0501072_0329849 Ga0501072_0329849_159_941 260
94 3300049823 Ga0501044_0107284 Ga0501044_0107284_446_1228 260
95 3300050516 nmdc:mga0sz30_144805_c1 nmdc:mga0sz30_144805_c1_17_802 260
96 3300053139 Ga0500568_0025069 Ga0500568_0025069_847_1629 260
97 3300026116 Ga0207674_10432947 Ga0207674_104329471 261
98 3300037466 Ga0395898_0844686 Ga0395898_0844686_21_806 261
99 3300037471 Ga0395905_0358071 Ga0395905_0358071_128_931 261
100 3300047320 Ga0495672_0043496 Ga0495672_0043496_1509_2294 261
101 3300048910 Ga0496107_0045255 Ga0496107_0045255_1564_2349 261
102 3300048924 Ga0496121_0000612 Ga0496121_0000612_36651_37436 261
103 3300048929 Ga0496126_0021656 Ga0496126_0021656_5001_5786 261
104 3300049570 Ga0501033_0038690 Ga0501033_0038690_751_1536 261
105 3300049574 Ga0501038_0037063 Ga0501038_0037063_384_1169 261
106 3300049580 Ga0501046_0034446 Ga0501046_0034446_2176_2961 261
107 3300049581 Ga0501047_0020091 Ga0501047_0020091_70_855 261
108 3300049742 Ga0501080_0128246 Ga0501080_0128246_1509_2294 261
109 3300049823 Ga0501044_0052430 Ga0501044_0052430_3165_3950 261
110 3300041413 Ga0439465_0043727 Ga0439465_0043727_648_1436 262
111 3300048929 Ga0496126_0317753 Ga0496126_0317753_227_1015 262
112 3300001989 JGI24739J22299_10022604 JGI24739J22299_100226043 263
113 3300005327 Ga0070658_10112356 Ga0070658_101123562 263
114 3300005335 Ga0070666_10298759 Ga0070666_102987592 263
115 3300005336 Ga0070680_100106246 Ga0070680_1001062462 263
116 3300005339 Ga0070660_100084520 Ga0070660_1000845203 263
117 3300005434 Ga0070709_10035347 Ga0070709_100353473 263
118 3300005436 Ga0070713_100032785 Ga0070713_1000327853 263
119 3300005439 Ga0070711_100082910 Ga0070711_1000829102 263
120 3300005455 Ga0070663_100295524 Ga0070663_1002955242 263
121 3300005530 Ga0070679_100381372 Ga0070679_1003813721 263
122 3300005563 Ga0068855_100055693 Ga0068855_1000556932 263
123 3300005563 Ga0068855_100263189 Ga0068855_1002631893 263
124 3300005563 Ga0068855_100381787 Ga0068855_1003817871 263
125 3300005577 Ga0068857_100016730 Ga0068857_1000167303 263
126 3300005578 Ga0068854_100063321 Ga0068854_1000633212 263
127 3300005614 Ga0068856_100098004 Ga0068856_1000980042 263
128 3300005614 Ga0068856_100729896 Ga0068856_1007298961 263
129 3300006038 Ga0075365_10006088 Ga0075365_100060883 263
130 3300006048 Ga0075363_100032927 Ga0075363_1000329273 263
131 3300006051 Ga0075364_10029280 Ga0075364_100292803 263
132 3300006178 Ga0075367_10072847 Ga0075367_100728471 263
133 3300006844 Ga0075428_100049507 Ga0075428_1000495073 263
134 3300006846 Ga0075430_100009979 Ga0075430_1000099795 263
135 3300006847 Ga0075431_100002581 Ga0075431_1000025818 263
136 3300006880 Ga0075429_100014043 Ga0075429_1000140435 263
137 3300009093 Ga0105240_10040895 Ga0105240_100408954 263
138 3300009094 Ga0111539_10003260 Ga0111539_100032603 263
139 3300009147 Ga0114129_10001565 Ga0114129_1000156517 263
140 3300009174 Ga0105241_10378608 Ga0105241_103786082 263
141 3300009545 Ga0105237_10408543 Ga0105237_104085431 263
142 3300009551 Ga0105238_10026494 Ga0105238_100264944 263
143 3300010375 Ga0105239_10055696 Ga0105239_100556964 263
144 3300013102 Ga0157371_10029253 Ga0157371_100292534 263
145 3300013307 Ga0157372_10169977 Ga0157372_101699772 263
146 3300025903 Ga0207680_10317226 Ga0207680_103172262 263
147 3300025904 Ga0207647_10013255 Ga0207647_100132552 263
148 3300025906 Ga0207699_10013393 Ga0207699_100133933 263
149 3300025909 Ga0207705_10030523 Ga0207705_100305233 263
150 3300025909 Ga0207705_10109707 Ga0207705_101097072 263
151 3300025913 Ga0207695_10068724 Ga0207695_100687243 263
152 3300025916 Ga0207663_10036961 Ga0207663_100369613 263
153 3300025917 Ga0207660_10428136 Ga0207660_104281361 263
154 3300025924 Ga0207694_10023997 Ga0207694_100239974 263
155 3300025928 Ga0207700_10167985 Ga0207700_101679851 263
156 3300025949 Ga0207667_10033321 Ga0207667_100333213 263
157 3300025949 Ga0207667_10038373 Ga0207667_100383734 263
158 3300025949 Ga0207667_10194981 Ga0207667_101949812 263
159 3300025981 Ga0207640_10056563 Ga0207640_100565633 263
160 3300025981 Ga0207640_10466388 Ga0207640_104663882 263
161 3300026041 Ga0207639_10026141 Ga0207639_100261412 263
162 3300026067 Ga0207678_10304086 Ga0207678_103040862 263
163 3300026078 Ga0207702_10045975 Ga0207702_100459752 263
164 3300026078 Ga0207702_10600665 Ga0207702_106006651 263
165 3300026116 Ga0207674_10028639 Ga0207674_100286394 263
166 3300031241 Ga0265325_10000055 Ga0265325_100000553 263
167 3300031241 Ga0265325_10044803 Ga0265325_100448032 263
168 3300031247 Ga0265340_10032619 Ga0265340_100326191 263
169 3300031249 Ga0265339_10001686 Ga0265339_1000168615 263
170 3300031344 Ga0265316_10093016 Ga0265316_100930162 263
171 3300031344 Ga0265316_10158785 Ga0265316_101587851 263
172 3300031548 Ga0307408_100022230 Ga0307408_1000222301 263
173 3300031595 Ga0265313_10020283 Ga0265313_100202834 263
174 3300031595 Ga0265313_10021836 Ga0265313_100218361 263
175 3300031711 Ga0265314_10002282 Ga0265314_100022828 263
176 3300031711 Ga0265314_10012308 Ga0265314_100123083 263
177 3300037312 Ga0395899_0007549 Ga0395899_0007549_4912_5703 263
178 3300037466 Ga0395898_0002807 Ga0395898_0002807_10406_11197 263
179 3300038443 Ga0395901_0519676 Ga0395901_0519676_309_1100 263
180 3300044842 Ga0466957_0200436 Ga0466957_0200436_24_815 263
181 3300048921 Ga0496118_0073755 Ga0496118_0073755_564_1373 263
182 3300048923 Ga0496120_0010024 Ga0496120_0010024_5490_6350 263
183 3300049568 Ga0501031_0017275 Ga0501031_0017275_3271_4062 263
184 3300049569 Ga0501032_0025126 Ga0501032_0025126_3239_4030 263
185 3300049569 Ga0501032_0137417 Ga0501032_0137417_181_975 263
186 3300049570 Ga0501033_0000098 Ga0501033_0000098_34971_35807 263
187 3300049570 Ga0501033_0008987 Ga0501033_0008987_3263_4054 263
188 3300049570 Ga0501033_0015666 Ga0501033_0015666_1039_1830 263
189 3300049571 Ga0501034_0001272 Ga0501034_0001272_11692_12528 263
190 3300049572 Ga0501036_0000049 Ga0501036_0000049_45991_46827 263
191 3300049573 Ga0501037_0000069 Ga0501037_0000069_39957_40793 263
192 3300049573 Ga0501037_0000753 Ga0501037_0000753_14560_15351 263
193 3300049573 Ga0501037_0373123 Ga0501037_0373123_94_885 263
194 3300049574 Ga0501038_0000034 Ga0501038_0000034_76597_77433 263
195 3300049575 Ga0501039_0000090 Ga0501039_0000090_34107_34943 263
196 3300049578 Ga0501042_0314326 Ga0501042_0314326_190_981 263
197 3300049579 Ga0501043_0000031 Ga0501043_0000031_130903_131694 263
198 3300049579 Ga0501043_0000130 Ga0501043_0000130_27778_28614 263
199 3300049580 Ga0501046_0000213 Ga0501046_0000213_28458_29294 263
200 3300049581 Ga0501047_0001193 Ga0501047_0001193_22337_23173 263
201 3300049582 Ga0501048_0001548 Ga0501048_0001548_10370_11206 263
202 3300049583 Ga0501067_0001256 Ga0501067_0001256_3509_4345 263
203 3300049584 Ga0501068_0000197 Ga0501068_0000197_27273_28109 263
204 3300049585 Ga0501069_0000362 Ga0501069_0000362_14950_15741 263
205 3300049585 Ga0501069_0002104 Ga0501069_0002104_3269_4105 263
206 3300049586 Ga0501070_0006517 Ga0501070_0006517_4963_5754 263
207 3300049586 Ga0501070_0007315 Ga0501070_0007315_7188_7997 263
208 3300049586 Ga0501070_0009992 Ga0501070_0009992_6934_7770 263
209 3300049586 Ga0501070_0059516 Ga0501070_0059516_630_1439 263
210 3300049586 Ga0501070_0128790 Ga0501070_0128790_1263_2054 263
211 3300049586 Ga0501070_0150621 Ga0501070_0150621_10_804 263
212 3300049587 Ga0501071_0026819 Ga0501071_0026819_3232_4023 263
213 3300049587 Ga0501071_0410072 Ga0501071_0410072_53_844 263
214 3300049588 Ga0501072_0000146 Ga0501072_0000146_17075_17911 263
215 3300049588 Ga0501072_0290398 Ga0501072_0290398_14_805 263
216 3300049589 Ga0501073_0029277 Ga0501073_0029277_466_1257 263
217 3300049589 Ga0501073_0065230 Ga0501073_0065230_257_1093 263
218 3300049589 Ga0501073_0117905 Ga0501073_0117905_1007_1798 263
219 3300049589 Ga0501073_0180756 Ga0501073_0180756_280_1089 263
220 3300049590 Ga0501074_0001890 Ga0501074_0001890_7878_8714 263
221 3300049590 Ga0501074_0004186 Ga0501074_0004186_7047_7838 263
222 3300049741 Ga0501079_0043351 Ga0501079_0043351_743_1579 263
223 3300049741 Ga0501079_0450118 Ga0501079_0450118_103_894 263
224 3300049742 Ga0501080_0000379 Ga0501080_0000379_5033_5869 263
225 3300049742 Ga0501080_0013625 Ga0501080_0013625_5042_5851 263
226 3300049742 Ga0501080_0016292 Ga0501080_0016292_2858_3649 263
227 3300049744 Ga0501083_0001104 Ga0501083_0001104_5898_6689 263
228 3300049744 Ga0501083_0001109 Ga0501083_0001109_4516_5352 263
229 3300049744 Ga0501083_0102595 Ga0501083_0102595_805_1614 263
230 3300049822 Ga0501035_0000036 Ga0501035_0000036_23783_24574 263
231 3300049822 Ga0501035_0008600 Ga0501035_0008600_257_1093 263
232 3300049822 Ga0501035_0018367 Ga0501035_0018367_1389_2183 263
233 3300049822 Ga0501035_0046884 Ga0501035_0046884_2570_3379 263
234 3300049822 Ga0501035_0051191 Ga0501035_0051191_1098_1907 263
235 3300049822 Ga0501035_0116926 Ga0501035_0116926_254_1045 263
236 3300049823 Ga0501044_0000011 Ga0501044_0000011_132497_133288 263
237 3300049823 Ga0501044_0004850 Ga0501044_0004850_11640_12476 263
238 3300049823 Ga0501044_0023247 Ga0501044_0023247_4253_5062 263
239 3300049823 Ga0501044_0116967 Ga0501044_0116967_436_1227 263
240 3300049823 Ga0501044_0186375 Ga0501044_0186375_362_1234 263
241 3300049823 Ga0501044_0246920 Ga0501044_0246920_267_1076 263
242 3300049823 Ga0501044_0306721 Ga0501044_0306721_690_1481 263
243 3300049823 Ga0501044_0376515 Ga0501044_0376515_117_911 263
244 3300049824 Ga0501045_0025834 Ga0501045_0025834_2830_3666 263
245 3300049824 Ga0501045_0230770 Ga0501045_0230770_44_835 263
246 3300050490 nmdc:mga03n38_78534_c1 nmdc:mga03n38_78534_c1_533_1327 263
247 3300050491 nmdc:mga00v17_29217_c1 nmdc:mga00v17_29217_c1_742_1536 263
248 3300050494 nmdc:mga06z11_49730_c1 nmdc:mga06z11_49730_c1_1194_1988 263
249 3300050507 nmdc:mga05p37_14_c1 nmdc:mga05p37_14_c1_93748_94539 263
250 3300050508 nmdc:mga09592_3973_c1 nmdc:mga09592_3973_c1_6900_7691 263
251 3300050509 nmdc:mga0qj67_94929_c1 nmdc:mga0qj67_94929_c1_1366_2157 263
252 3300050510 nmdc:mga06r32_1943_c1 nmdc:mga06r32_1943_c1_4780_5571 263
253 3300053087 Ga0500643_005624 Ga0500643_005624_4418_5209 263
254 3300053088 Ga0500644_0003835 Ga0500644_0003835_1155_1946 263
255 3300053094 Ga0500566_0037092 Ga0500566_0037092_1212_2003 263
256 3300053119 Ga0500595_000139 Ga0500595_000139_20280_21071 263
257 3300053139 Ga0500568_0038017 Ga0500568_0038017_900_1694 263
258 3300053151 Ga0500604_0016664 Ga0500604_0016664_715_1506 263
259 3300053730 Ga0500645_000502 Ga0500645_000502_14953_15744 263
260 3300054114 Ga0501084_0002564 Ga0501084_0002564_3464_4300 263
261 3300060353 Ga0501082_0003475 Ga0501082_0003475_5033_5869 263
262 3300060353 Ga0501082_0031201 Ga0501082_0031201_1706_2497 263
263 3300060353 Ga0501082_0206288 Ga0501082_0206288_635_1444 263
264 3300061719 Ga0466962_0032354 Ga0466962_0032354_400_1191 263

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03372

Exo_endo_phos

Endonuclease/Exonuclease/phosphatase family

1

248

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
6fke-assembly1.cif.gz_A structure of 3' phosphatase nexo (d146n) from neisseria bound to product dna hairpin 0.961 1 259
2jc4-assembly1.cif.gz_A 3'-5' exonuclease (nexo) from neisseria meningitidis 0.9585 1 259
2jc4-assembly1.cif.gz_A 3'-5' exonuclease (nexo) from neisseria meningitidis 0.9512 1 259
6fke-assembly1.cif.gz_A structure of 3' phosphatase nexo (d146n) from neisseria bound to product dna hairpin 0.9501 1 259
1ako-assembly1.cif.gz_A exonuclease iii from escherichia coli 0.9425 1 258
ID Description Score Start End Superfamily
6fk4A00 Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase 0.9607 1 259 3.60.10.10
6fk4A00 Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase 0.9498 1 259 3.60.10.10
af_P09030_1_268_3.60.10.10 Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase 0.9386 1 258 3.60.10.10
2voaB00 Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase 0.9345 1 260 3.60.10.10
af_P96273_24_289_3.60.10.10 Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase 0.9302 1 258 3.60.10.10
ID Description Score Start End GO Terms
AF-A0A523JTZ4-F1-model_v4 Exodeoxyribonuclease III 0.9961 1 69 GO:0003677
GO:0004519
GO:0006281
GO:0008311
AF-A0A656Z470-F1-model_v4 Exodeoxyribonuclease III 0.9883 1 180 GO:0006281
GO:0008311
GO:0046872
AF-A0A7C9VEU4-F1-model_v4 Exodeoxyribonuclease III 0.9858 1 171 GO:0003677
GO:0004519
GO:0006281
GO:0008311
GO:0046872
AF-A0A2V8GL27-F1-model_v4 Exodeoxyribonuclease III 0.9856 1 70 GO:0003677
GO:0004519
GO:0006281
GO:0008311
AF-A0A840MWS9-F1-model_v4 Exodeoxyribonuclease-3 (EC 3.1.11.2) 0.9843 1 260 GO:0003677
GO:0004519
GO:0006281
GO:0008311
GO:0046872

Feature Viewer

pLDDT pTM Quality
93.16 0.92 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map