F372590

General Info

Members Datasets Scaffolds Average Seq Length
264 168 522 299

Family's Representative Sequence

Representative Sequence 3300009148|Ga0105243_10293183|Ga0105243_102931832
Length 362
Sequence VRIRVLGSAAGGGFPQWNCGCPNCRGVRAGTIRATPRRQESIAISSDGRGWFLLNTSPEIREQIESFPGLHPQAPRHSPIQAIVLTNGDLDHTLGLLSLRESHPLVVYATERMHRGFTDGNVLYRTLQRFPGQLTWRALTLGSENELAGVDGKGSGLWIEAVPVPGKLPIHLESQGAGDPEDNIGLRIREAATGRRLAYFPAAGGLTPIVGKAIDDADCVFFDGTFWSGDELPAQGLGTKRADDMAHLPVGGPGGSLAALHGLRAARRIYIHVNNTNPLLREDSPERKEAEAAGWEIAGDGMELSLWLNLGSEAVPCTRPCRDQSTALHESAPGAAAELSAGMLPPLACVATMCEPAPARAR

Samples

Sample ID Description Type Environment
1 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
6 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
7 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
8 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
9 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
10 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
11 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
16 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
17 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
18 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
19 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
20 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
21 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
22 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
23 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
24 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
25 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
26 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
27 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
28 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
29 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
30 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
31 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
32 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
33 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
34 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
37 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
38 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
39 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300027378 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes) (version 2) Metagenome Rhizosphere
53 3300027395 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 PM (SPAdes) (version 2) Metagenome Rhizosphere
54 3300027471 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes) (version 2) Metagenome Rhizosphere
55 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
56 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
57 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
58 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
59 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
60 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
61 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
62 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
66 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
67 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
68 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
69 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
70 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
71 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
72 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
73 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
74 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
75 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
76 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
77 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
78 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
79 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
80 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
81 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
82 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
83 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
84 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
85 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
86 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
87 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
88 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
89 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
90 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
91 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
92 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
93 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
94 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
95 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
96 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
97 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
98 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
99 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
100 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
101 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
102 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
103 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
104 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
105 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
106 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
107 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
108 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
109 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
110 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
111 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
112 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
113 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
114 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
115 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
116 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
117 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
118 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
119 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
120 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
121 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
122 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
123 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
124 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
125 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
137 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
138 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
139 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
140 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
141 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
142 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
143 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
144 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
145 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
146 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
147 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
150 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
151 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
152 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
153 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
154 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
155 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
156 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
157 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
158 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
159 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
160 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
161 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
162 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
163 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
164 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
165 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
166 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
167 2889049205 Paenibacillus rhizovicinus 14171R-81 Isolate Rhizosphere
168 2980182181 Paenibacillus cymbidii R196 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.24
Metatranscriptomes 0
Isolates 0.76

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.76
Nodule 0
Rhizoplane 0
Rhizosphere 98.11
Stem 0
Stem Tuber 0
Unclassified 3.79

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105243_10293183 3300009148 Bacteria 1471
2 rootH1_10025694 3300003323 Bacteria 6756
3 Ga0068869_100019429 3300005334 Bacteria 4642
4 Ga0070680_100041057 3300005336 Bacteria 3751
5 Ga0070692_10010074 3300005345 Bacteria 4287
6 Ga0070713_100552618 3300005436 Unclassified 1090
7 Ga0070701_10030079 3300005438 Bacteria 2684
8 Ga0070705_100007901 3300005440 Bacteria 5255
9 Ga0070663_100072624 3300005455 Bacteria 2507
10 Ga0068867_100037473 3300005459 Plasmid 3524
11 Ga0068867_100108367 3300005459 Bacteria 2130
12 Ga0070706_100061560 3300005467 Bacteria 3466
13 Ga0070706_100205602 3300005467 Bacteria 1839
14 Ga0070706_100495233 3300005467 Bacteria 1137
15 Ga0070707_100112515 3300005468 Bacteria 2641
16 Ga0070698_100086093 3300005471 Bacteria 3129
17 Ga0070699_100012576 3300005518 Bacteria 7300
18 Ga0070699_100161203 3300005518 Bacteria 1985
19 Ga0070697_100110936 3300005536 Bacteria 2286
20 Ga0070697_100225104 3300005536 Bacteria 1599
21 Ga0070695_100004189 3300005545 Bacteria 8437
22 Ga0070695_100087938 3300005545 Bacteria 2068
23 Ga0070696_100028713 3300005546 Bacteria 3796
24 Ga0070696_100029266 3300005546 Bacteria 3763
25 Ga0068857_100056928 3300005577 Bacteria 3470
26 Ga0068858_100073716 3300005842 Bacteria 3169
27 Ga0068860_100079505 3300005843 Bacteria 3118
28 Ga0068860_100101786 3300005843 Bacteria 2741
29 Ga0068862_100141196 3300005844 Bacteria 2138
30 Ga0068862_100514509 3300005844 Bacteria 1138
31 Ga0081455_10003698 3300005937 Bacteria 17513
32 Ga0081538_10003684 3300005981 Bacteria 14386
33 Ga0081538_10007504 3300005981 Bacteria 9426
34 Ga0081538_10014368 3300005981 Bacteria 6202
35 Ga0081540_1017556 3300005983 Bacteria 4425
36 Ga0070712_100001422 3300006175 Bacteria 14574
37 Ga0075430_100001117 3300006846 Bacteria 21379
38 Ga0075431_100007545 3300006847 Bacteria 10829
39 Ga0075431_100082099 3300006847 Bacteria 3328
40 Ga0075431_100167315 3300006847 Bacteria 2260
41 Ga0075433_10021618 3300006852 Bacteria 5397
42 Ga0075433_10021774 3300006852 Bacteria 5377
43 Ga0075433_10064446 3300006852 Bacteria 3212
44 Ga0075433_10085514 3300006852 Bacteria 2784
45 Ga0075434_100024128 3300006871 Bacteria 5942
46 Ga0075434_100059832 3300006871 Bacteria 3788
47 Ga0075434_100283035 3300006871 Bacteria 1677
48 Ga0075429_100000028 3300006880 Bacteria 66858
49 Ga0068865_100006540 3300006881 Bacteria 7120
50 Ga0075436_100094128 3300006914 Bacteria 2084
51 Ga0075435_100007245 3300007076 Bacteria 7896
52 Ga0075435_100151289 3300007076 Bacteria 1951
53 Ga0111539_10001422 3300009094 Bacteria 31904
54 Ga0111539_10017339 3300009094 Bacteria 8912
55 Ga0111539_10071719 3300009094 Bacteria 4087
56 Ga0114129_10012716 3300009147 Bacteria 11980
57 Ga0114129_10065404 3300009147 Bacteria 5075
58 Ga0114129_10245361 3300009147 Bacteria 2406
59 Ga0105243_10007276 3300009148 Bacteria 8506
60 Ga0105242_10047147 3300009176 Bacteria 3498
61 Ga0157376_10041781 3300014969 Unclassified 3757
62 Ga0213872_10000948 3300021361 Bacteria 20307
63 Ga0207688_10079832 3300025901 Bacteria 1867
64 Ga0207643_10073276 3300025908 Bacteria 1974
65 Ga0207693_10006389 3300025915 Bacteria 9768
66 Ga0207660_10024779 3300025917 Bacteria 4064
67 Ga0207660_10190172 3300025917 Bacteria 1598
68 Ga0207662_10068869 3300025918 Bacteria 2137
69 Ga0207686_10110545 3300025934 Bacteria 1852
70 Ga0207709_10081699 3300025935 Bacteria 2085
71 Ga0207704_10025270 3300025938 Unclassified 3237
72 Ga0207689_10057802 3300025942 Bacteria 3190
73 Ga0207703_10517369 3300026035 Bacteria 1122
74 Ga0207678_10019123 3300026067 Bacteria 6013
75 Ga0207648_10081809 3300026089 Bacteria 2816
76 Ga0207674_10042337 3300026116 Bacteria 4704
77 Ga0209981_1008632 3300027378 Bacteria 1384
78 Ga0209996_1001233 3300027395 Bacteria 3090
79 Ga0209995_1000661 3300027471 Bacteria 5290
80 Ga0209968_1000144 3300027526 Bacteria 12440
81 Ga0209970_1003981 3300027614 Bacteria 2466
82 Ga0209971_1000001 3300027682 Bacteria 149669
83 Ga0209966_1000229 3300027695 Bacteria 21386
84 Ga0209998_10000044 3300027717 Bacteria 50808
85 Ga0209974_10007269 3300027876 Bacteria 3820
86 Ga0207428_10000508 3300027907 Bacteria 46516
87 Ga0268266_10210712 3300028379 Bacteria 1782
88 Ga0268265_10258777 3300028380 Bacteria 1546
89 Ga0268264_10102996 3300028381 Bacteria 2485
90 Ga0268264_10586294 3300028381 Bacteria 1097
91 Ga0265338_10009385 3300028800 Bacteria 11681
92 Ga0265332_10020574 3300031238 Bacteria 2913
93 Ga0265325_10001815 3300031241 Bacteria 14767
94 Ga0265339_10000597 3300031249 Bacteria 28108
95 Ga0265331_10000102 3300031250 Bacteria 115584
96 Ga0265313_10001415 3300031595 Bacteria 22447
97 Ga0265313_10051702 3300031595 Bacteria 1965
98 Ga0265314_10000411 3300031711 Bacteria 57706
99 Ga0265342_10059264 3300031712 Unclassified 2262
100 Ga0307410_10184582 3300031852 Bacteria 1582
101 Ga0307409_100272110 3300031995 Bacteria 1560
102 Ga0373926_0039509 3300035083 Unclassified 1682
103 Ga0373934_0007712 3300035086 Bacteria 4001
104 Ga0373944_0015852 3300035089 Unclassified 2118
105 Ga0373936_0003639 3300035113 Bacteria 5788
106 Ga0373941_0004274 3300035115 Bacteria 3288
107 Ga0373953_0018699 3300035117 Bacteria 2567
108 Ga0373956_0054132 3300035119 Bacteria 1807
109 Ga0373957_0029264 3300035120 Unclassified 2011
110 Ga0373946_0135893 3300035171 Bacteria 1135
111 Ga0373955_0028013 3300035172 Bacteria 2917
112 Ga0373927_0020808 3300035695 Bacteria 4300
113 Ga0373937_0018566 3300036401 Bacteria 6212
114 Ga0373937_0024863 3300036401 Bacteria 5406
115 Ga0373937_0293148 3300036401 Bacteria 1537
116 Ga0395900_0005883 3300037418 Bacteria 12809
117 Ga0395901_0006398 3300038443 Bacteria 11931
118 Ga0436361_0079738 3300039447 Bacteria 122121
119 Ga0436361_0528123 3300039447 Bacteria 19689
120 Ga0439464_0001577 3300042439 Bacteria 5414
121 Ga0439460_0003210 3300042461 Bacteria 3950
122 Ga0451577_0002634 3300042876 Bacteria 21013
123 Ga0453683_0011187 3300044673 Bacteria 5931
124 Ga0466965_0009801 3300044683 Bacteria 4457
125 Ga0466963_0103949 3300044694 Bacteria 1946
126 Ga0453684_0064791 3300044712 Bacteria 4665
127 Ga0466957_0248216 3300044842 Bacteria 1183
128 Ga0466959_0292512 3300045049 Unclassified 1116
129 Ga0451576_0017599 3300045051 Bacteria 7853
130 Ga0451576_0025421 3300045051 Bacteria 6378
131 Ga0451576_0104649 3300045051 Bacteria 2944
132 Ga0451576_0114491 3300045051 Bacteria 2808
133 Ga0495592_0001747 3300046454 Bacteria 15259
134 Ga0495592_0007755 3300046454 Bacteria 8042
135 Ga0495590_0034470 3300046457 Bacteria 1768
136 Ga0495629_0048208 3300046459 Bacteria 2987
137 Ga0495651_0022011 3300046462 Bacteria 4956
138 Ga0495653_0036266 3300046463 Bacteria 3884
139 Ga0495582_0074277 3300046473 Bacteria 1882
140 Ga0495662_0009192 3300046476 Bacteria 4849
141 Ga0495664_0014114 3300046477 Bacteria 4526
142 Ga0495608_0026205 3300046511 Bacteria 3976
143 Ga0495628_0004166 3300046516 Bacteria 12869
144 Ga0495628_0014489 3300046516 Bacteria 6608
145 Ga0495630_0011866 3300046517 Bacteria 6316
146 Ga0495652_0004306 3300046529 Bacteria 13640
147 Ga0495645_0000609 3300046543 Bacteria 24694
148 Ga0495667_0022574 3300046559 Bacteria 4239
149 Ga0495634_0026850 3300046642 Bacteria 4014
150 Ga0495657_0013800 3300046675 Bacteria 5946
151 Ga0495599_0001013 3300046678 Bacteria 15801
152 Ga0495599_0009806 3300046678 Bacteria 5862
153 Ga0495647_0002196 3300046681 Bacteria 6103
154 Ga0495613_0073376 3300046689 Bacteria 2493
155 Ga0495600_0000657 3300046809 Bacteria 17939
156 Ga0495604_0128792 3300047317 Bacteria 1821
157 Ga0495674_0084219 3300047319 Bacteria 2725
158 Ga0495680_0275271 3300047322 Unclassified 1187
159 Ga0495675_0016900 3300047444 Bacteria 4616
160 Ga0496121_0005260 3300048924 Bacteria 16719
161 Ga0501033_0120857 3300049570 Bacteria 1901
162 Ga0501036_0299368 3300049572 Bacteria 1345
163 Ga0501037_0043322 3300049573 Bacteria 3308
164 Ga0501037_0067843 3300049573 Bacteria 2597
165 Ga0501038_0129416 3300049574 Bacteria 2074
166 Ga0501038_0264938 3300049574 Bacteria 1357
167 Ga0501039_0028699 3300049575 Bacteria 4284
168 Ga0501040_0005925 3300049576 Bacteria 7917
169 Ga0501040_0352438 3300049576 Bacteria 1054
170 Ga0501041_0002326 3300049577 Bacteria 10748
171 Ga0501041_0003285 3300049577 Bacteria 9299
172 Ga0501041_0015601 3300049577 Bacteria 4512
173 Ga0501042_0003234 3300049578 Bacteria 10187
174 Ga0501042_0022176 3300049578 Bacteria 4435
175 Ga0501042_0170112 3300049578 Bacteria 1572
176 Ga0501042_0293666 3300049578 Bacteria 1174
177 Ga0501042_0322201 3300049578 Bacteria 1117
178 Ga0501046_0017935 3300049580 Bacteria 5899
179 Ga0501046_0052918 3300049580 Bacteria 3199
180 Ga0501047_0018244 3300049581 Bacteria 6725
181 Ga0501048_0008811 3300049582 Bacteria 7599
182 Ga0501048_0183329 3300049582 Bacteria 1484
183 Ga0501067_0019417 3300049583 Bacteria 3762
184 Ga0501069_0021682 3300049585 Bacteria 3490
185 Ga0501069_0023729 3300049585 Bacteria 3344
186 Ga0501072_0017609 3300049588 Bacteria 5494
187 Ga0501072_0080558 3300049588 Bacteria 2580
188 Ga0501072_0143739 3300049588 Bacteria 1902
189 Ga0501072_0442677 3300049588 Bacteria 1029
190 Ga0501074_0016963 3300049590 Bacteria 5283
191 Ga0501075_0006338 3300049591 Bacteria 8133
192 Ga0501075_0006659 3300049591 Bacteria 7964
193 Ga0501075_0045809 3300049591 Bacteria 3284
194 Ga0501076_0001926 3300049592 Bacteria 14163
195 Ga0501076_0031064 3300049592 Bacteria 4163
196 Ga0501076_0057531 3300049592 Bacteria 3087
197 Ga0501076_0075644 3300049592 Bacteria 2699
198 Ga0501077_0006505 3300049593 Bacteria 7172
199 Ga0501077_0043199 3300049593 Bacteria 2865
200 Ga0501077_0174105 3300049593 Bacteria 1367
201 Ga0501079_0011001 3300049741 Bacteria 6894
202 Ga0501079_0036064 3300049741 Bacteria 3808
203 Ga0501079_0054394 3300049741 Bacteria 3087
204 Ga0501079_0058838 3300049741 Bacteria 2965
205 Ga0501080_0049074 3300049742 Bacteria 3929
206 Ga0501080_0079956 3300049742 Bacteria 3039
207 Ga0501081_0001534 3300049743 Bacteria 14186
208 Ga0501081_0025446 3300049743 Bacteria 3980
209 Ga0501081_0049968 3300049743 Bacteria 2880
210 Ga0501081_0151679 3300049743 Bacteria 1665
211 Ga0501083_0035710 3300049744 Bacteria 3394
212 Ga0501083_0109030 3300049744 Bacteria 1821
213 Ga0501035_0302845 3300049822 Unclassified 1346
214 Ga0501044_0000216 3300049823 Bacteria 73383
215 Ga0501044_0002307 3300049823 Bacteria 21740
216 Ga0501044_0029077 3300049823 Bacteria 5829
217 Ga0501045_0023982 3300049824 Bacteria 4379
218 Ga0501045_0033264 3300049824 Bacteria 3738
219 Ga0501045_0158820 3300049824 Bacteria 1682
220 nmdc:mga05p37_14458_c1 3300050507 Bacteria 9476
221 nmdc:mga05p37_400410_c1 3300050507 Bacteria 1603
222 nmdc:mga05p37_738072_c1 3300050507 Bacteria 1087
223 nmdc:mga09592_3279_c1 3300050508 Bacteria 13104
224 nmdc:mga0qj67_4792_c1 3300050509 Bacteria 9840
225 nmdc:mga06r32_113024_c1 3300050510 Bacteria 2673
226 nmdc:mga06r32_138931_c1 3300050510 Bacteria 2405
227 nmdc:mga06r32_214756_c1 3300050510 Bacteria 1911
228 nmdc:mga08y16_133812_c1 3300050511 Bacteria 2577
229 nmdc:mga08y16_56700_c1 3300050511 Bacteria 4094
230 nmdc:mga08y16_8817_c1 3300050511 Bacteria 10584
231 nmdc:mga0n895_12990_c1 3300050512 Bacteria 7490
232 nmdc:mga0n895_131832_c1 3300050512 Bacteria 2524
233 nmdc:mga0n895_247814_c1 3300050512 Bacteria 1808
234 nmdc:mga0n895_281706_c1 3300050512 Bacteria 1686
235 nmdc:mga0n895_42121_c1 3300050512 Bacteria 4442
236 nmdc:mga0n895_49343_c1 3300050512 Bacteria 4123
237 nmdc:mga0rr50_189992_c1 3300050513 Bacteria 1682
238 nmdc:mga0rr50_24698_c1 3300050513 Bacteria 4168
239 nmdc:mga08x19_52184_c1 3300050514 Bacteria 2629
240 nmdc:mga0a205_114692_c1 3300050515 Bacteria 2593
241 nmdc:mga0a205_214761_c1 3300050515 Bacteria 1811
242 nmdc:mga0a205_4147_c1 3300050515 Bacteria 12981
243 nmdc:mga0a205_60496_c1 3300050515 Bacteria 3658
244 Ga0495601_0006446 3300053077 Bacteria 6865
245 Ga0495619_0050303 3300053085 Bacteria 2750
246 Ga0500595_027007 3300053119 Bacteria 1971
247 Ga0500568_0017029 3300053139 Bacteria 3217
248 Ga0501084_0004676 3300054114 Bacteria 11182
249 Ga0501084_0059272 3300054114 Bacteria 3204
250 Ga0501084_0109893 3300054114 Bacteria 2316
251 Ga0501084_0202398 3300054114 Bacteria 1675
252 Ga0501084_0328652 3300054114 Bacteria 1291
253 Ga0590075_034323 3300059424 Bacteria 1290
254 Ga0501082_0006624 3300060353 Bacteria 10021
255 Ga0501082_0035728 3300060353 Bacteria 4283
256 Ga0530510_0009403 3300061734 Bacteria 6854
257 Ga0530510_0026678 3300061734 Bacteria 4136
258 Ga0530510_0296553 3300061734 Bacteria 1209
259 Ga0530510_0448381 3300061734 Bacteria 975
260 2889049458 2889049205 Bacteria 7524325
261 2980188251 2980182181 Bacteria 9454109
262 Ga0105243_10293183
263 rootH1_10025694
264 Ga0068869_100019429
265 Ga0070680_100041057
266 Ga0070692_10010074
267 Ga0070713_100552618
268 Ga0070701_10030079
269 Ga0070705_100007901
270 Ga0070663_100072624
271 Ga0068867_100037473
272 Ga0068867_100108367
273 Ga0070706_100061560
274 Ga0070706_100205602
275 Ga0070706_100495233
276 Ga0070707_100112515
277 Ga0070698_100086093
278 Ga0070699_100012576
279 Ga0070699_100161203
280 Ga0070697_100110936
281 Ga0070697_100225104
282 Ga0070695_100004189
283 Ga0070695_100087938
284 Ga0070696_100028713
285 Ga0070696_100029266
286 Ga0068857_100056928
287 Ga0068858_100073716
288 Ga0068860_100079505
289 Ga0068860_100101786
290 Ga0068862_100141196
291 Ga0068862_100514509
292 Ga0081455_10003698
293 Ga0081538_10003684
294 Ga0081538_10007504
295 Ga0081538_10014368
296 Ga0081540_1017556
297 Ga0070712_100001422
298 Ga0075430_100001117
299 Ga0075431_100007545
300 Ga0075431_100082099
301 Ga0075431_100167315
302 Ga0075433_10021618
303 Ga0075433_10021774
304 Ga0075433_10064446
305 Ga0075433_10085514
306 Ga0075434_100024128
307 Ga0075434_100059832
308 Ga0075434_100283035
309 Ga0075429_100000028
310 Ga0068865_100006540
311 Ga0075436_100094128
312 Ga0075435_100007245
313 Ga0075435_100151289
314 Ga0111539_10001422
315 Ga0111539_10017339
316 Ga0111539_10071719
317 Ga0114129_10012716
318 Ga0114129_10065404
319 Ga0114129_10245361
320 Ga0105243_10007276
321 Ga0105242_10047147
322 Ga0157376_10041781
323 Ga0213872_10000948
324 Ga0207688_10079832
325 Ga0207643_10073276
326 Ga0207693_10006389
327 Ga0207660_10024779
328 Ga0207660_10190172
329 Ga0207662_10068869
330 Ga0207686_10110545
331 Ga0207709_10081699
332 Ga0207704_10025270
333 Ga0207689_10057802
334 Ga0207703_10517369
335 Ga0207678_10019123
336 Ga0207648_10081809
337 Ga0207674_10042337
338 Ga0209981_1008632
339 Ga0209996_1001233
340 Ga0209995_1000661
341 Ga0209968_1000144
342 Ga0209970_1003981
343 Ga0209971_1000001
344 Ga0209966_1000229
345 Ga0209998_10000044
346 Ga0209974_10007269
347 Ga0207428_10000508
348 Ga0268266_10210712
349 Ga0268265_10258777
350 Ga0268264_10102996
351 Ga0268264_10586294
352 Ga0265338_10009385
353 Ga0265332_10020574
354 Ga0265325_10001815
355 Ga0265339_10000597
356 Ga0265331_10000102
357 Ga0265313_10001415
358 Ga0265313_10051702
359 Ga0265314_10000411
360 Ga0265342_10059264
361 Ga0307410_10184582
362 Ga0307409_100272110
363 Ga0373926_0039509
364 Ga0373934_0007712
365 Ga0373944_0015852
366 Ga0373936_0003639
367 Ga0373941_0004274
368 Ga0373953_0018699
369 Ga0373956_0054132
370 Ga0373957_0029264
371 Ga0373946_0135893
372 Ga0373955_0028013
373 Ga0373927_0020808
374 Ga0373937_0018566
375 Ga0373937_0024863
376 Ga0373937_0293148
377 Ga0395900_0005883
378 Ga0395901_0006398
379 Ga0436361_0079738
380 Ga0436361_0528123
381 Ga0439464_0001577
382 Ga0439460_0003210
383 Ga0451577_0002634
384 Ga0453683_0011187
385 Ga0466965_0009801
386 Ga0466963_0103949
387 Ga0453684_0064791
388 Ga0466957_0248216
389 Ga0466959_0292512
390 Ga0451576_0017599
391 Ga0451576_0025421
392 Ga0451576_0104649
393 Ga0451576_0114491
394 Ga0495592_0001747
395 Ga0495592_0007755
396 Ga0495590_0034470
397 Ga0495629_0048208
398 Ga0495651_0022011
399 Ga0495653_0036266
400 Ga0495582_0074277
401 Ga0495662_0009192
402 Ga0495664_0014114
403 Ga0495608_0026205
404 Ga0495628_0004166
405 Ga0495628_0014489
406 Ga0495630_0011866
407 Ga0495652_0004306
408 Ga0495645_0000609
409 Ga0495667_0022574
410 Ga0495634_0026850
411 Ga0495657_0013800
412 Ga0495599_0001013
413 Ga0495599_0009806
414 Ga0495647_0002196
415 Ga0495613_0073376
416 Ga0495600_0000657
417 Ga0495604_0128792
418 Ga0495674_0084219
419 Ga0495680_0275271
420 Ga0495675_0016900
421 Ga0496121_0005260
422 Ga0501033_0120857
423 Ga0501036_0299368
424 Ga0501037_0043322
425 Ga0501037_0067843
426 Ga0501038_0129416
427 Ga0501038_0264938
428 Ga0501039_0028699
429 Ga0501040_0005925
430 Ga0501040_0352438
431 Ga0501041_0002326
432 Ga0501041_0003285
433 Ga0501041_0015601
434 Ga0501042_0003234
435 Ga0501042_0022176
436 Ga0501042_0170112
437 Ga0501042_0293666
438 Ga0501042_0322201
439 Ga0501046_0017935
440 Ga0501046_0052918
441 Ga0501047_0018244
442 Ga0501048_0008811
443 Ga0501048_0183329
444 Ga0501067_0019417
445 Ga0501069_0021682
446 Ga0501069_0023729
447 Ga0501072_0017609
448 Ga0501072_0080558
449 Ga0501072_0143739
450 Ga0501072_0442677
451 Ga0501074_0016963
452 Ga0501075_0006338
453 Ga0501075_0006659
454 Ga0501075_0045809
455 Ga0501076_0001926
456 Ga0501076_0031064
457 Ga0501076_0057531
458 Ga0501076_0075644
459 Ga0501077_0006505
460 Ga0501077_0043199
461 Ga0501077_0174105
462 Ga0501079_0011001
463 Ga0501079_0036064
464 Ga0501079_0054394
465 Ga0501079_0058838
466 Ga0501080_0049074
467 Ga0501080_0079956
468 Ga0501081_0001534
469 Ga0501081_0025446
470 Ga0501081_0049968
471 Ga0501081_0151679
472 Ga0501083_0035710
473 Ga0501083_0109030
474 Ga0501035_0302845
475 Ga0501044_0000216
476 Ga0501044_0002307
477 Ga0501044_0029077
478 Ga0501045_0023982
479 Ga0501045_0033264
480 Ga0501045_0158820
481 nmdc:mga05p37_14458_c1
482 nmdc:mga05p37_400410_c1
483 nmdc:mga05p37_738072_c1
484 nmdc:mga09592_3279_c1
485 nmdc:mga0qj67_4792_c1
486 nmdc:mga06r32_113024_c1
487 nmdc:mga06r32_138931_c1
488 nmdc:mga06r32_214756_c1
489 nmdc:mga08y16_133812_c1
490 nmdc:mga08y16_56700_c1
491 nmdc:mga08y16_8817_c1
492 nmdc:mga0n895_12990_c1
493 nmdc:mga0n895_131832_c1
494 nmdc:mga0n895_247814_c1
495 nmdc:mga0n895_281706_c1
496 nmdc:mga0n895_42121_c1
497 nmdc:mga0n895_49343_c1
498 nmdc:mga0rr50_189992_c1
499 nmdc:mga0rr50_24698_c1
500 nmdc:mga08x19_52184_c1
501 nmdc:mga0a205_114692_c1
502 nmdc:mga0a205_214761_c1
503 nmdc:mga0a205_4147_c1
504 nmdc:mga0a205_60496_c1
505 Ga0495601_0006446
506 Ga0495619_0050303
507 Ga0500595_027007
508 Ga0500568_0017029
509 Ga0501084_0004676
510 Ga0501084_0059272
511 Ga0501084_0109893
512 Ga0501084_0202398
513 Ga0501084_0328652
514 Ga0590075_034323
515 Ga0501082_0006624
516 Ga0501082_0035728
517 Ga0530510_0009403
518 Ga0530510_0026678
519 Ga0530510_0296553
520 Ga0530510_0448381
521 2889049458
522 2980188251

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12706

Lactamase_B_2

Beta-lactamase superfamily domain

50

273

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
4z67-assembly1.cif.gz_A the 1.5-angstrom crystal structure of mn(2+)-bound pqqb from pseudomonas putida 0.9496 2 308
6e13-assembly1.cif.gz_A-2 pseudomonas putida pqqb with a non-physiological zinc at the active site binds the substrate mimic, 5-cysteinyl-3,4-dihydroxyphenylalanine (5-cys-dopa), non-specifically but supports the proposed function of the enzyme in pyrroloquinoline quinone biosynthesis. 0.9479 2 308
3jxp-assembly1.cif.gz_A crystal structure of the coenzyme pqq synthesis protein (pqqb) from pseudomonas putida 0.9445 2 307
4z7r-assembly1.cif.gz_B the 1.98-angstrom crystal structure of zn(2+)-bound pqqb from methylobacterium extorquens 0.9374 1 308
4z7r-assembly1.cif.gz_A the 1.98-angstrom crystal structure of zn(2+)-bound pqqb from methylobacterium extorquens 0.9371 1 308
ID Description Score Start End Superfamily
6e13A00 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.9479 2 308 3.60.15.10
4z7rA00 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.9371 1 308 3.60.15.10
4z7rA00 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.934 1 308 3.60.15.10
af_P16692_1_251_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.7934 2 306 3.60.15.10
af_P16692_1_251_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.7759 2 306 3.60.15.10
ID Description Score Start End GO Terms
AF-A0A2G8MIS6-F1-model_v4 deleted 0.9855 3 68
AF-A0A531KY25-F1-model_v4 Pyrroloquinoline quinone biosynthesis protein B 0.9769 3 86
AF-A0A2V6S4E4-F1-model_v4 Coenzyme PQQ synthesis protein B (Pyrroloquinoline quinone biosynthesis protein B) 0.9765 1 308 GO:0018189
AF-A0A1Q7TZ65-F1-model_v4 Coenzyme PQQ synthesis protein B (Pyrroloquinoline quinone biosynthesis protein B) 0.9761 37 308 GO:0018189
AF-A0A529VJS2-F1-model_v4 deleted 0.9745 3 56

Map