F372130

General Info

Members Datasets Scaffolds Average Seq Length
263 164 516 461

Family's Representative Sequence

Representative Sequence 3300048904|Ga0496101_0030485|Ga0496101_0030485_572_2200
Length 542
Sequence MTPSTESIYTEVHPLNTKPIGDNPESLSPFDESGYLYMDDIRDADGSVRPPGVYRSGTAFHGGADNEASVLTPADFRKHGYAIIDWIATYRETLEARPVLQATTPGTIRASLPSSPPSRQEPIEDILADFESTIVPGLLHWQHPSFFGFFPSNVELSSVLGDLLSTGLGVIGISWESGPALTELEETCMDWLRQMLGLSPAWHGVIQDSASSGTLVSIVCARERHAGRALAATPGQASKPAMFYTSTLAHSSVTKAAAVAGFRRDQIRIVPTRANGALDTDILRTMIETDIASGASPAVLVATAGATATTAMDNFRELADIAEAWGMWLHVDAAMAGAAMILPECRPAWEGIERTDSIVFNPHKWLGAATDCSAMYVRDTDHLVRVMGTNPSYLRTSTDGAATQYRDWGVPLGRRFRALKLWFLIRTQGVDGLARRLRRDIAHARRFAQIVRTTPDWCVVGKVPLQTVCVRHEPNGLRGEALDAHTRAWVAALNASGKAYLTAALVDGAWLARVSIGALATEWPHIERLWQDMREYAEQTSG

Samples

Sample ID Description Type Environment
1 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
2 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
16 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
17 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
18 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
27 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
28 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
29 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
30 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
31 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
32 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
33 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
34 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
35 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
36 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
37 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
38 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
39 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
40 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
41 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
46 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
47 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
50 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
51 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
52 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
53 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
54 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
55 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
56 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
79 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
80 3300027552 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
82 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
83 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
86 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
87 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
88 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
89 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
90 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
91 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
92 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
93 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
94 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
95 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
96 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
97 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
98 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
99 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
100 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
101 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
102 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
103 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
104 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
105 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
106 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
107 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
108 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
109 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
110 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
111 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
112 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
113 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
114 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
115 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
116 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
117 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
118 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
119 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
120 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
121 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
122 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
123 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
124 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
125 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
126 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
127 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
128 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
129 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
130 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
131 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
132 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
133 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
136 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
137 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
138 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
139 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
140 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
141 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
142 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
143 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
144 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
145 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
146 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
147 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
148 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
149 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
150 3300053135 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 endosphere Metagenome Endosphere
151 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
152 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
153 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
154 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
155 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
156 2511231024 Pseudomonas sp. GM84 Isolate Nodule
157 2765235841 Pseudomonas putida AA7 Isolate Unclassified
158 2806310737 Pseudomonas mosselii BS011 Isolate Unclassified
159 2806310745 Pseudomonas mosselii PtA1 Isolate Unclassified
160 3007803356 Pseudomonas sp. CM27 Isolate Unclassified
161 8052494512 Pseudomonas putida LD6 Isolate Unclassified
162 8056115690 Pseudomonas muyukensis COW39 Isolate Rhizosphere
163 8056120720 Pseudomonas maumuensis COW77 Isolate Rhizosphere
164 8056137416 Pseudomonas fakonensis COW40 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.2
Metatranscriptomes 0.38
Isolates 3.42

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.32
Nodule 1.14
Rhizoplane 1.14
Rhizosphere 82.51
Stem 0
Stem Tuber 0
Unclassified 1.52

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496101_0030485 3300048904 Bacteria 3782
2 Ga0055531_10012285 3300003794 Bacteria 4041
3 Ga0070676_10111327 3300005328 Bacteria 1705
4 Ga0068869_100074811 3300005334 Bacteria 2515
5 Ga0070666_10000037 3300005335 Bacteria 116528
6 Ga0070666_10010976 3300005335 Bacteria 5676
7 Ga0070680_100159740 3300005336 Bacteria 1894
8 Ga0070691_10007881 3300005341 Bacteria 4873
9 Ga0070661_100031276 3300005344 Bacteria 3848
10 Ga0070692_10001385 3300005345 Bacteria 8763
11 Ga0070668_100007135 3300005347 Bacteria 8280
12 Ga0070668_100084651 3300005347 Bacteria 2491
13 Ga0070669_100056726 3300005353 Bacteria 2872
14 Ga0070675_100173400 3300005354 Bacteria 1861
15 Ga0070674_100008250 3300005356 Bacteria 6191
16 Ga0070674_100129824 3300005356 Bacteria 1877
17 Ga0070673_100236312 3300005364 Bacteria 1587
18 Ga0070701_10010992 3300005438 Bacteria 4026
19 Ga0070705_100003828 3300005440 Bacteria 7359
20 Ga0070700_100005936 3300005441 Bacteria 6488
21 Ga0070694_100050701 3300005444 Bacteria 2799
22 Ga0070678_100187699 3300005456 Bacteria 1697
23 Ga0068867_100051258 3300005459 Bacteria 3043
24 Ga0070685_10019873 3300005466 Bacteria 3629
25 Ga0070699_100000214 3300005518 Bacteria 57401
26 Ga0070665_100000853 3300005548 Bacteria 39671
27 Ga0070665_100013647 3300005548 Bacteria 8172
28 Ga0070665_100191165 3300005548 Bacteria 2048
29 Ga0070704_100015024 3300005549 Bacteria 4850
30 Ga0068855_100023566 3300005563 Bacteria 7370
31 Ga0068864_100063187 3300005618 Bacteria 3208
32 Ga0068861_100002929 3300005719 Bacteria 11269
33 Ga0068861_100009698 3300005719 Bacteria 6657
34 Ga0068861_100018598 3300005719 Bacteria 4951
35 Ga0068863_100005166 3300005841 Bacteria 12873
36 Ga0068862_100007848 3300005844 Bacteria 8828
37 Ga0068862_100113484 3300005844 Bacteria 2381
38 Ga0081455_10000962 3300005937 Bacteria 36818
39 Ga0081455_10117134 3300005937 Bacteria 2106
40 Ga0081539_10004193 3300005985 Bacteria 16289
41 Ga0081539_10015529 3300005985 Bacteria 5525
42 Ga0081539_10016556 3300005985 Bacteria 5251
43 Ga0075369_10014836 3300006186 Bacteria 3118
44 Ga0075428_100023064 3300006844 Bacteria 6887
45 Ga0075428_100024550 3300006844 Bacteria 6670
46 Ga0075428_100092720 3300006844 Bacteria 3293
47 Ga0075428_100109639 3300006844 Unclassified 3007
48 Ga0075430_100036250 3300006846 Bacteria 4182
49 Ga0075431_100027713 3300006847 Bacteria 5815
50 Ga0075431_100063267 3300006847 Bacteria 3818
51 Ga0075431_100090505 3300006847 Bacteria 3158
52 Ga0075431_100109820 3300006847 Bacteria 2847
53 Ga0075434_100000545 3300006871 Bacteria 28731
54 Ga0075434_100010214 3300006871 Bacteria 8792
55 Ga0075434_100022514 3300006871 Bacteria 6136
56 Ga0075429_100015552 3300006880 Bacteria 6593
57 Ga0075429_100040973 3300006880 Bacteria 4033
58 Ga0075429_100070595 3300006880 Bacteria 3041
59 Ga0068865_100004729 3300006881 Bacteria 8223
60 Ga0068865_100005639 3300006881 Bacteria 7597
61 Ga0075436_100014627 3300006914 Bacteria 5379
62 Ga0075436_100069626 3300006914 Bacteria 2431
63 Ga0099823_1000027 3300006944 Bacteria 69973
64 Ga0105251_10013062 3300009011 Bacteria 4664
65 Ga0105240_10000343 3300009093 Bacteria 87196
66 Ga0105240_10121820 3300009093 Bacteria 3140
67 Ga0105240_10198501 3300009093 Bacteria 2353
68 Ga0111539_10059197 3300009094 Bacteria 4544
69 Ga0111539_10144588 3300009094 Bacteria 2784
70 Ga0111539_10328292 3300009094 Bacteria 1781
71 Ga0111539_10393817 3300009094 Bacteria 1613
72 Ga0114129_10000600 3300009147 Bacteria 44447
73 Ga0114129_10006625 3300009147 Bacteria 16445
74 Ga0114129_10014688 3300009147 Bacteria 11158
75 Ga0114129_10047217 3300009147 Bacteria 6051
76 Ga0114129_10107788 3300009147 Bacteria 3846
77 Ga0114129_10186086 3300009147 Bacteria 2822
78 Ga0105243_10030830 3300009148 Bacteria 4132
79 Ga0105248_10375813 3300009177 Bacteria 1600
80 Ga0105238_10000154 3300009551 Bacteria 75243
81 Ga0105239_10000020 3300010375 Bacteria 264435
82 Ga0157369_10003015 3300013105 Bacteria 20134
83 Ga0163162_10000647 3300013306 Bacteria 32241
84 Ga0157372_10004489 3300013307 Bacteria 14886
85 Ga0163163_10000805 3300014325 Bacteria 26618
86 Ga0163163_10024697 3300014325 Bacteria 5723
87 Ga0157380_10086769 3300014326 Bacteria 2572
88 Ga0157376_10048498 3300014969 Bacteria 3512
89 Ga0213876_10000231 3300021384 Bacteria 54874
90 Ga0209050_1011412 3300025298 Bacteria 4217
91 Ga0209257_1000237 3300025304 Bacteria 128812
92 Ga0207713_1016169 3300025735 Bacteria 3797
93 Ga0207680_10000001 3300025903 Bacteria 1091453
94 Ga0207645_10003636 3300025907 Bacteria 11653
95 Ga0207645_10053863 3300025907 Bacteria 2570
96 Ga0207705_10007515 3300025909 Bacteria 8007
97 Ga0207707_10162990 3300025912 Bacteria 1949
98 Ga0207695_10000318 3300025913 Bacteria 116126
99 Ga0207695_10024910 3300025913 Bacteria 6715
100 Ga0207671_10089540 3300025914 Bacteria 2316
101 Ga0207660_10129570 3300025917 Bacteria 1919
102 Ga0207681_10018527 3300025923 Bacteria 4387
103 Ga0207681_10067194 3300025923 Bacteria 2485
104 Ga0207694_10009679 3300025924 Bacteria 7266
105 Ga0207659_10013751 3300025926 Bacteria 5198
106 Ga0207659_10156105 3300025926 Bacteria 1787
107 Ga0207706_10009663 3300025933 Bacteria 8853
108 Ga0207670_10037566 3300025936 Bacteria 3157
109 Ga0207669_10043747 3300025937 Bacteria 2625
110 Ga0207704_10013534 3300025938 Bacteria 4086
111 Ga0207668_10114746 3300025972 Bacteria 2028
112 Ga0207708_10017078 3300026075 Bacteria 5462
113 Ga0207708_10058296 3300026075 Bacteria 2946
114 Ga0207708_10201187 3300026075 Bacteria 1589
115 Ga0207641_10001309 3300026088 Bacteria 24607
116 Ga0207648_10004836 3300026089 Bacteria 13737
117 Ga0207648_10005029 3300026089 Bacteria 13421
118 Ga0207675_100003759 3300026118 Bacteria 14787
119 Ga0207675_100006271 3300026118 Bacteria 11285
120 Ga0207675_100092614 3300026118 Bacteria 2842
121 Ga0209389_1000118 3300027296 Bacteria 70923
122 Ga0209371_1000629 3300027312 Bacteria 31275
123 Ga0209982_1001088 3300027552 Bacteria 3632
124 Ga0209971_1005021 3300027682 Bacteria 3143
125 Ga0209966_1000031 3300027695 Bacteria 63685
126 Ga0209998_10003440 3300027717 Bacteria 3463
127 Ga0268266_10000075 3300028379 Bacteria 218045
128 Ga0268266_10000228 3300028379 Bacteria 97214
129 Ga0268256_1000723 3300030500 Bacteria 24334
130 Ga0265760_10000013 3300031090 Bacteria 98018
131 Ga0265327_10004191 3300031251 Bacteria 12983
132 Ga0307513_10089928 3300031456 Bacteria 3133
133 Ga0307516_10119832 3300031730 Bacteria 2424
134 Ga0307510_10000590 3300033180 Bacteria 36615
135 Ga0307510_10074146 3300033180 Bacteria 3365
136 Ga0373955_0075398 3300035172 Bacteria 1896
137 Ga0373935_0061522 3300035692 Bacteria 2404
138 Ga0373927_0000052 3300035695 Bacteria 82707
139 Ga0373933_0005236 3300035724 Bacteria 7075
140 Ga0373933_0062040 3300035724 Bacteria 2256
141 Ga0373933_0128597 3300035724 Bacteria 1591
142 Ga0373937_0000889 3300036401 Bacteria 25624
143 Ga0373937_0063982 3300036401 Bacteria 3383
144 Ga0395901_0165015 3300038443 Bacteria 2326
145 Ga0436365_1799730 3300039437 Bacteria 37517
146 Ga0436361_0177849 3300039447 Bacteria 4436
147 Ga0436363_1377396 3300039450 Bacteria 1609
148 Ga0439432_001219 3300042006 Bacteria 9731
149 Ga0439456_000024 3300042013 Bacteria 58893
150 Ga0439464_0012273 3300042439 Bacteria 2279
151 Ga0451577_0000485 3300042876 Bacteria 67343
152 Ga0451577_0012204 3300042876 Bacteria 8076
153 Ga0451577_0289495 3300042876 Bacteria 1484
154 Ga0466969_0024383 3300044656 Bacteria 3111
155 Ga0453683_0034936 3300044673 Bacteria 3169
156 Ga0466965_0025493 3300044683 Bacteria 2862
157 Ga0466966_0005212 3300044684 Bacteria 8540
158 Ga0466966_0036391 3300044684 Bacteria 3177
159 Ga0466961_0001368 3300044693 Bacteria 15052
160 Ga0466961_0008546 3300044693 Bacteria 6524
161 Ga0466961_0042917 3300044693 Bacteria 2897
162 Ga0453684_0001415 3300044712 Bacteria 69097
163 Ga0453684_0006008 3300044712 Bacteria 23512
164 Ga0453684_0009447 3300044712 Bacteria 17058
165 Ga0453684_0022510 3300044712 Bacteria 9343
166 Ga0453684_0069213 3300044712 Bacteria 4477
167 Ga0453684_0315157 3300044712 Bacteria 1773
168 Ga0466971_0016772 3300044719 Bacteria 3235
169 Ga0466957_0008438 3300044842 Bacteria 5861
170 Ga0466957_0024262 3300044842 Bacteria 3588
171 Ga0466959_0021949 3300045049 Bacteria 4715
172 Ga0466959_0026979 3300045049 Bacteria 4260
173 Ga0466959_0029368 3300045049 Bacteria 4073
174 Ga0466959_0080138 3300045049 Bacteria 2354
175 Ga0466959_0151146 3300045049 Bacteria 1636
176 Ga0451576_0019551 3300045051 Bacteria 7391
177 Ga0451576_0020105 3300045051 Bacteria 7275
178 Ga0451576_0089232 3300045051 Bacteria 3206
179 Ga0451576_0148299 3300045051 Bacteria 2446
180 Ga0451576_0276250 3300045051 Bacteria 1756
181 Ga0466958_0007779 3300045836 Bacteria 5914
182 Ga0495651_0017517 3300046462 Bacteria 5548
183 Ga0495653_0183088 3300046463 Bacteria 1436
184 Ga0495650_0002741 3300046471 Bacteria 13606
185 Ga0495580_0004469 3300046472 Bacteria 11745
186 Ga0495580_0038953 3300046472 Bacteria 3401
187 Ga0495582_0068379 3300046473 Bacteria 1963
188 Ga0495608_0118776 3300046511 Bacteria 1696
189 Ga0495645_0004207 3300046543 Bacteria 9842
190 Ga0495667_0075092 3300046559 Bacteria 2200
191 Ga0495635_0087784 3300046663 Bacteria 2128
192 Ga0495613_0082235 3300046689 Bacteria 2339
193 Ga0495602_0013695 3300048088 Bacteria 8274
194 Ga0496101_0130705 3300048904 Bacteria 1907
195 Ga0496114_0016133 3300048917 Bacteria 6011
196 Ga0496118_0000224 3300048921 Bacteria 98813
197 Ga0496118_0003540 3300048921 Bacteria 19531
198 Ga0496119_0000139 3300048922 Bacteria 101548
199 Ga0496120_0000862 3300048923 Bacteria 42878
200 Ga0496121_0027677 3300048924 Bacteria 5299
201 Ga0496124_0004495 3300048927 Bacteria 16262
202 Ga0496124_0011719 3300048927 Bacteria 8746
203 Ga0496126_0000935 3300048929 Bacteria 50389
204 Ga0496126_0012838 3300048929 Bacteria 8561
205 Ga0496126_0016371 3300048929 Bacteria 7416
206 Ga0496126_0040153 3300048929 Unclassified 4339
207 Ga0496126_0104289 3300048929 Bacteria 2477
208 Ga0501034_0000248 3300049571 Bacteria 99691
209 Ga0501039_0037087 3300049575 Bacteria 3763
210 Ga0501073_0010053 3300049589 Bacteria 6957
211 Ga0501073_0083684 3300049589 Bacteria 2220
212 Ga0501076_0079470 3300049592 Bacteria 2632
213 Ga0501076_0204492 3300049592 Bacteria 1613
214 Ga0501083_0013715 3300049744 Bacteria 5669
215 Ga0501044_0095014 3300049823 Bacteria 3005
216 Ga0501044_0168578 3300049823 Bacteria 2162
217 nmdc:mga05p37_11_c1 3300050507 Bacteria 149577
218 nmdc:mga05p37_354140_c1 3300050507 Bacteria 1728
219 nmdc:mga05p37_61774_c1 3300050507 Bacteria 4611
220 nmdc:mga05p37_6270_c1 3300050507 Bacteria 14008
221 nmdc:mga05p37_63368_c1 3300050507 Bacteria 4549
222 nmdc:mga05p37_86046_c1 3300050507 Bacteria 3874
223 nmdc:mga05p37_8887_c1 3300050507 Bacteria 11870
224 nmdc:mga09592_167034_c1 3300050508 Bacteria 1902
225 nmdc:mga09592_17081_c1 3300050508 Bacteria 5940
226 nmdc:mga09592_32436_c1 3300050508 Bacteria 4355
227 nmdc:mga06r32_146686_c1 3300050510 Unclassified 2337
228 nmdc:mga06r32_17919_c1 3300050510 Bacteria 6475
229 nmdc:mga06r32_182132_c1 3300050510 Unclassified 2086
230 nmdc:mga06r32_249713_c1 3300050510 Bacteria 1762
231 nmdc:mga08y16_36408_c1 3300050511 Bacteria 5169
232 nmdc:mga08y16_74527_c1 3300050511 Bacteria 3536
233 nmdc:mga0n895_212384_c1 3300050512 Bacteria 1965
234 nmdc:mga0n895_27041_c1 3300050512 Bacteria 5444
235 nmdc:mga0n895_42764_c1 3300050512 Bacteria 4410
236 nmdc:mga0sz30_25398_c1 3300050516 Bacteria 2040
237 Ga0500651_0003441 3300053093 Bacteria 8653
238 Ga0500555_004800 3300053103 Bacteria 3836
239 Ga0500595_034244 3300053119 Bacteria 1681
240 Ga0500642_0001037 3300053130 Bacteria 8007
241 Ga0500658_0018444 3300053134 Bacteria 2616
242 Ga0500659_0001846 3300053135 Bacteria 13174
243 Ga0500588_0014258 3300053146 Bacteria 2010
244 Ga0500588_0018599 3300053146 Bacteria 1833
245 Ga0500616_0002160 3300053153 Bacteria 17024
246 Ga0501084_0122955 3300054114 Bacteria 2183
247 Ga0501082_0072183 3300060353 Bacteria 2973
248 Ga0530510_0011268 3300061734 Bacteria 6274
249 Ga0530510_0021082 3300061734 Bacteria 4636
250 2511374930 2511231024 Bacteria 5835885
251 2765584555 2765235841 Bacteria 6137024
252 2807408864 2806310737 Bacteria 5751088
253 2807457195 2806310745 Bacteria 5742165
254 3007808871 3007803356 Bacteria 5931491
255 8052496737 8052494512 Bacteria 5765634
256 8056118580 8056115690 Bacteria 5527654
257 8056122976 8056120720 Bacteria 5758328
258 8056139865 8056137416 Bacteria 6147080
259 Ga0496101_0030485
260 Ga0055531_10012285
261 Ga0070676_10111327
262 Ga0068869_100074811
263 Ga0070666_10000037
264 Ga0070666_10010976
265 Ga0070680_100159740
266 Ga0070691_10007881
267 Ga0070661_100031276
268 Ga0070692_10001385
269 Ga0070668_100007135
270 Ga0070668_100084651
271 Ga0070669_100056726
272 Ga0070675_100173400
273 Ga0070674_100008250
274 Ga0070674_100129824
275 Ga0070673_100236312
276 Ga0070701_10010992
277 Ga0070705_100003828
278 Ga0070700_100005936
279 Ga0070694_100050701
280 Ga0070678_100187699
281 Ga0068867_100051258
282 Ga0070685_10019873
283 Ga0070699_100000214
284 Ga0070665_100000853
285 Ga0070665_100013647
286 Ga0070665_100191165
287 Ga0070704_100015024
288 Ga0068855_100023566
289 Ga0068864_100063187
290 Ga0068861_100002929
291 Ga0068861_100009698
292 Ga0068861_100018598
293 Ga0068863_100005166
294 Ga0068862_100007848
295 Ga0068862_100113484
296 Ga0081455_10000962
297 Ga0081455_10117134
298 Ga0081539_10004193
299 Ga0081539_10015529
300 Ga0081539_10016556
301 Ga0075369_10014836
302 Ga0075428_100023064
303 Ga0075428_100024550
304 Ga0075428_100092720
305 Ga0075428_100109639
306 Ga0075430_100036250
307 Ga0075431_100027713
308 Ga0075431_100063267
309 Ga0075431_100090505
310 Ga0075431_100109820
311 Ga0075434_100000545
312 Ga0075434_100010214
313 Ga0075434_100022514
314 Ga0075429_100015552
315 Ga0075429_100040973
316 Ga0075429_100070595
317 Ga0068865_100004729
318 Ga0068865_100005639
319 Ga0075436_100014627
320 Ga0075436_100069626
321 Ga0099823_1000027
322 Ga0105251_10013062
323 Ga0105240_10000343
324 Ga0105240_10121820
325 Ga0105240_10198501
326 Ga0111539_10059197
327 Ga0111539_10144588
328 Ga0111539_10328292
329 Ga0111539_10393817
330 Ga0114129_10000600
331 Ga0114129_10006625
332 Ga0114129_10014688
333 Ga0114129_10047217
334 Ga0114129_10107788
335 Ga0114129_10186086
336 Ga0105243_10030830
337 Ga0105248_10375813
338 Ga0105238_10000154
339 Ga0105239_10000020
340 Ga0157369_10003015
341 Ga0163162_10000647
342 Ga0157372_10004489
343 Ga0163163_10000805
344 Ga0163163_10024697
345 Ga0157380_10086769
346 Ga0157376_10048498
347 Ga0213876_10000231
348 Ga0209050_1011412
349 Ga0209257_1000237
350 Ga0207713_1016169
351 Ga0207680_10000001
352 Ga0207645_10003636
353 Ga0207645_10053863
354 Ga0207705_10007515
355 Ga0207707_10162990
356 Ga0207695_10000318
357 Ga0207695_10024910
358 Ga0207671_10089540
359 Ga0207660_10129570
360 Ga0207681_10018527
361 Ga0207681_10067194
362 Ga0207694_10009679
363 Ga0207659_10013751
364 Ga0207659_10156105
365 Ga0207706_10009663
366 Ga0207670_10037566
367 Ga0207669_10043747
368 Ga0207704_10013534
369 Ga0207668_10114746
370 Ga0207708_10017078
371 Ga0207708_10058296
372 Ga0207708_10201187
373 Ga0207641_10001309
374 Ga0207648_10004836
375 Ga0207648_10005029
376 Ga0207675_100003759
377 Ga0207675_100006271
378 Ga0207675_100092614
379 Ga0209389_1000118
380 Ga0209371_1000629
381 Ga0209982_1001088
382 Ga0209971_1005021
383 Ga0209966_1000031
384 Ga0209998_10003440
385 Ga0268266_10000075
386 Ga0268266_10000228
387 Ga0268256_1000723
388 Ga0265760_10000013
389 Ga0265327_10004191
390 Ga0307513_10089928
391 Ga0307516_10119832
392 Ga0307510_10000590
393 Ga0307510_10074146
394 Ga0373955_0075398
395 Ga0373935_0061522
396 Ga0373927_0000052
397 Ga0373933_0005236
398 Ga0373933_0062040
399 Ga0373933_0128597
400 Ga0373937_0000889
401 Ga0373937_0063982
402 Ga0395901_0165015
403 Ga0436365_1799730
404 Ga0436361_0177849
405 Ga0436363_1377396
406 Ga0439432_001219
407 Ga0439456_000024
408 Ga0439464_0012273
409 Ga0451577_0000485
410 Ga0451577_0012204
411 Ga0451577_0289495
412 Ga0466969_0024383
413 Ga0453683_0034936
414 Ga0466965_0025493
415 Ga0466966_0005212
416 Ga0466966_0036391
417 Ga0466961_0001368
418 Ga0466961_0008546
419 Ga0466961_0042917
420 Ga0453684_0001415
421 Ga0453684_0006008
422 Ga0453684_0009447
423 Ga0453684_0022510
424 Ga0453684_0069213
425 Ga0453684_0315157
426 Ga0466971_0016772
427 Ga0466957_0008438
428 Ga0466957_0024262
429 Ga0466959_0021949
430 Ga0466959_0026979
431 Ga0466959_0029368
432 Ga0466959_0080138
433 Ga0466959_0151146
434 Ga0451576_0019551
435 Ga0451576_0020105
436 Ga0451576_0089232
437 Ga0451576_0148299
438 Ga0451576_0276250
439 Ga0466958_0007779
440 Ga0495651_0017517
441 Ga0495653_0183088
442 Ga0495650_0002741
443 Ga0495580_0004469
444 Ga0495580_0038953
445 Ga0495582_0068379
446 Ga0495608_0118776
447 Ga0495645_0004207
448 Ga0495667_0075092
449 Ga0495635_0087784
450 Ga0495613_0082235
451 Ga0495602_0013695
452 Ga0496101_0130705
453 Ga0496114_0016133
454 Ga0496118_0000224
455 Ga0496118_0003540
456 Ga0496119_0000139
457 Ga0496120_0000862
458 Ga0496121_0027677
459 Ga0496124_0004495
460 Ga0496124_0011719
461 Ga0496126_0000935
462 Ga0496126_0012838
463 Ga0496126_0016371
464 Ga0496126_0040153
465 Ga0496126_0104289
466 Ga0501034_0000248
467 Ga0501039_0037087
468 Ga0501073_0010053
469 Ga0501073_0083684
470 Ga0501076_0079470
471 Ga0501076_0204492
472 Ga0501083_0013715
473 Ga0501044_0095014
474 Ga0501044_0168578
475 nmdc:mga05p37_11_c1
476 nmdc:mga05p37_354140_c1
477 nmdc:mga05p37_61774_c1
478 nmdc:mga05p37_6270_c1
479 nmdc:mga05p37_63368_c1
480 nmdc:mga05p37_86046_c1
481 nmdc:mga05p37_8887_c1
482 nmdc:mga09592_167034_c1
483 nmdc:mga09592_17081_c1
484 nmdc:mga09592_32436_c1
485 nmdc:mga06r32_146686_c1
486 nmdc:mga06r32_17919_c1
487 nmdc:mga06r32_182132_c1
488 nmdc:mga06r32_249713_c1
489 nmdc:mga08y16_36408_c1
490 nmdc:mga08y16_74527_c1
491 nmdc:mga0n895_212384_c1
492 nmdc:mga0n895_27041_c1
493 nmdc:mga0n895_42764_c1
494 nmdc:mga0sz30_25398_c1
495 Ga0500651_0003441
496 Ga0500555_004800
497 Ga0500595_034244
498 Ga0500642_0001037
499 Ga0500658_0018444
500 Ga0500659_0001846
501 Ga0500588_0014258
502 Ga0500588_0018599
503 Ga0500616_0002160
504 Ga0501084_0122955
505 Ga0501082_0072183
506 Ga0530510_0011268
507 Ga0530510_0021082
508 2511374930
509 2765584555
510 2807408864
511 2807457195
512 3007808871
513 8052496737
514 8056118580
515 8056122976
516 8056139865

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00282

Pyridoxal_deC

Pyridoxal-dependent decarboxylase conserved domain

105

473

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
7xin-assembly2.cif.gz_C crystal structure of dodc from pseudomonas 0.9321 1 441
7xin-assembly2.cif.gz_C crystal structure of dodc from pseudomonas 0.9259 1 441
4e1o-assembly1.cif.gz_A human histidine decarboxylase complex with histidine methyl ester (hme) 0.9164 1 442
4e1o-assembly1.cif.gz_A human histidine decarboxylase complex with histidine methyl ester (hme) 0.9124 1 442
8ora-assembly1.cif.gz_A-2 human holo aromatic l-amino acid decarboxylase (aadc) external aldimine with l-dopa methylester 0.9089 1 442
ID Description Score Start End Superfamily
af_P20711_1_81_1.20.1340.10 Mainly Alpha;Up-down Bundle;dopa decarboxylase, N-terminal domain;dopa decarboxylase, N-terminal domain 0.9645 1 81 1.20.1340.10
1js6B01 Mainly Alpha;Up-down Bundle;dopa decarboxylase, N-terminal domain;dopa decarboxylase, N-terminal domain 0.9625 1 81 1.20.1340.10
af_P34751_712_815_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9605 342 442 3.90.1150.10
af_Q8RY79_386_490_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9583 342 442 3.90.1150.10
af_Q94I30_400_502_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.956 341 442 3.90.1150.10
ID Description Score Start End GO Terms
AF-A0A382C1G9-F1-model_v4 Aromatic amino acid beta-eliminating lyase/threonine aldolase domain-containing protein 0.9744 327 440 GO:0005737
GO:0016831
AF-A0A2V7XG83-F1-model_v4 Aspartate aminotransferase family protein 0.9723 1 115 GO:0005737
GO:0006520
GO:0008483
GO:0016831
GO:0019752
GO:0030170
AF-A0A813ZE79-F1-model_v4 Aromatic-L-amino-acid decarboxylase 0.9653 1 131 GO:0005737
GO:0006520
GO:0016020
GO:0016831
GO:0019752
GO:0030170
AF-A0A6N6KQA6-F1-model_v4 Aspartate aminotransferase family protein 0.9649 328 438 GO:0005737
GO:0008483
GO:0016831
GO:0019752
GO:0030170
AF-A0A814UTX3-F1-model_v4 Uncharacterized protein 0.9605 1 131 GO:0005737
GO:0006520
GO:0016020
GO:0016831
GO:0019752
GO:0030170

Map