F366605

General Info

Members Datasets Scaffolds Average Seq Length
256 196 512 409

Family's Representative Sequence

Representative Sequence 3300031548|Ga0307408_100143176|Ga0307408_1001431762
Length 464
Sequence MITNAKSHRREDKLAPSAGHLSPGEIEVSDPLLVPTPDSPKAAPLISKEVDWSTIRADFPILSRSVHGKPLVYLDSTATSQKPQAVLDAMDDYYRTTNANIHRGVYEMSEVATDRYEKARARIAKFINAKSSREVIYTRNTTEAINLVTYSWGRANLEKGDVVLLSKMEHHSNLVPWHMLAAERGVVLRYLDVDPNGMLVLDHLDEMLQGVKLVSVTHMSNVLGTINPVEQIIEAAHKAGALVVLDAAQSVPHLPVDVQALDVDFLAFSGHKMCGPTGIGVLYGKRNLLEEMPPFMGGGDMINTVTLENFTPNQLPWKFEAGTPAIAEAIGLGAAVDYLSTIGMDNVHAHERELTEYALDQMRNLTGVTLYGPDHKQSKIQNPKSKIDKGGVVSFAIEDVHPHDIATILDSEGIAIRAGHHCCQPLMHHLNVPALARASFYIYTTKEDIDKLVEGIEKVKSIFA

Samples

Sample ID Description Type Environment
1 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
5 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
6 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
21 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
22 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
25 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
26 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
31 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
32 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
33 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
35 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
36 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
37 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
38 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
39 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
40 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
41 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
42 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
43 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
44 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
45 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
47 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
48 3300012512 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.old.270510 Metagenome Rhizosphere
49 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
50 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
51 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
52 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
85 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
86 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
90 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
91 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
92 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
93 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
94 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
95 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
96 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
97 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
98 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
99 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
100 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
101 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
102 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
103 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
104 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
105 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
106 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
107 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
108 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
109 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
110 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
111 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
112 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
113 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
114 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
115 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
116 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
117 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
118 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
119 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
120 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
121 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
122 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
123 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
124 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
125 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
126 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
127 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
128 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
129 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
130 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
131 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
132 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
133 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
134 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
135 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
136 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
137 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
138 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
139 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
140 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
141 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
142 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
143 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
144 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
145 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
146 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
147 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
148 3300049127 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
149 3300049132 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
150 3300049134 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
151 3300049161 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_A_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
152 3300049162 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
153 3300049527 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
154 3300049528 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
155 3300049531 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
156 3300049532 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
157 3300049533 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
158 3300049536 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_A_3_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
159 3300049537 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B12_A_3_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
160 3300049539 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_B_3_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
161 3300049547 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A25_A_5_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
162 3300049549 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_A_5_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
163 3300049551 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
164 3300049552 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_A_7_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
165 3300049556 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
166 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
168 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
169 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
170 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
171 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
172 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
173 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
174 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
175 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
176 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
177 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
178 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
179 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
180 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
181 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
182 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
183 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
184 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
185 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
186 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
187 2675902999 Frankia asymbiotica NRRL B-16386 Isolate Nodule
188 2687453737 Frankia sp. BMG5.36 Isolate Nodule
189 2773857921 Frankia asymbiotica NRRL B-16386 Isolate Nodule
190 2818991459 Paenibacillus sp. 597 Isolate Unclassified
191 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
192 2857460504 Brevibacillus sp. R-74223 Isolate Unclassified
193 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
194 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
195 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
196 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 82.81
Metatranscriptomes 12.11
Isolates 5.08

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.52
Nodule 1.17
Rhizoplane 5.47
Rhizosphere 83.98
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307408_100143176 3300031548 Bacteria 1879
2 SwRhRL2b_contig_1005527 2162886007 Bacteria 6812
3 JGI25406J46586_10014109 3300003203 Bacteria 3406
4 rootH1_10143354 3300003316 Bacteria 4972
5 Ga0006562J51391_1004836 3300003578 Bacteria 5563
6 Ga0065704_10000411 3300005289 Bacteria 28770
7 Ga0070658_10043896 3300005327 Bacteria 3612
8 Ga0070670_100003677 3300005331 Bacteria 12782
9 Ga0068869_100001245 3300005334 Bacteria 15028
10 Ga0070680_100092433 3300005336 Bacteria 2505
11 Ga0068868_100007359 3300005338 Bacteria 7840
12 Ga0070689_100026643 3300005340 Bacteria 4353
13 Ga0070692_10002493 3300005345 Bacteria 7163
14 Ga0070675_100013556 3300005354 Bacteria 6409
15 Ga0070671_100002954 3300005355 Bacteria 13219
16 Ga0070671_100008360 3300005355 Bacteria 8290
17 Ga0070673_100008126 3300005364 Bacteria 6961
18 Ga0070663_100003424 3300005455 Bacteria 9156
19 Ga0070662_100000428 3300005457 Bacteria 24890
20 Ga0070662_100086108 3300005457 Bacteria 2350
21 Ga0070681_10076299 3300005458 Bacteria 3310
22 Ga0070685_10002801 3300005466 Bacteria 8909
23 Ga0070685_10029761 3300005466 Bacteria 3036
24 Ga0070706_100008206 3300005467 Bacteria 9740
25 Ga0070706_100068216 3300005467 Bacteria 3289
26 Ga0070686_100000015 3300005544 Bacteria 158823
27 Ga0068855_100137523 3300005563 Bacteria 2786
28 Ga0070702_100002847 3300005615 Bacteria 7590
29 Ga0068851_10021990 3300005834 Bacteria 3101
30 Ga0068870_10001037 3300005840 Bacteria 10970
31 Ga0068863_100006203 3300005841 Bacteria 11727
32 Ga0068858_100048458 3300005842 Bacteria 3937
33 Ga0068858_100300993 3300005842 Bacteria 1530
34 Ga0068860_100002328 3300005843 Bacteria 19941
35 Ga0081540_1000117 3300005983 Bacteria 84123
36 Ga0081539_10000095 3300005985 Bacteria 204474
37 Ga0075367_10113481 3300006178 Bacteria 1665
38 Ga0097621_100006415 3300006237 Bacteria 8350
39 Ga0097621_100214794 3300006237 Bacteria 1674
40 Ga0075428_100106216 3300006844 Bacteria 3061
41 Ga0075430_100010166 3300006846 Bacteria 7968
42 Ga0075431_100049848 3300006847 Bacteria 4317
43 Ga0075433_10005579 3300006852 Bacteria 9885
44 Ga0075434_100002856 3300006871 Bacteria 15319
45 Ga0075429_100005038 3300006880 Bacteria 11370
46 Ga0075436_100002169 3300006914 Bacteria 13525
47 Ga0075435_100006462 3300007076 Bacteria 8291
48 Ga0105251_10008366 3300009011 Bacteria 6239
49 Ga0105245_10427942 3300009098 Bacteria 1328
50 Ga0105247_10014261 3300009101 Bacteria 4769
51 Ga0114129_10000016 3300009147 Bacteria 127415
52 Ga0114129_10210574 3300009147 Bacteria 2628
53 Ga0105248_10000473 3300009177 Bacteria 45835
54 Ga0105238_10000025 3300009551 Bacteria 196198
55 Ga0157327_1001502 3300012512 Bacteria 1473
56 Ga0157370_10025448 3300013104 Bacteria 5858
57 Ga0157372_10028842 3300013307 Bacteria 6058
58 Ga0157372_10423255 3300013307 Bacteria 1552
59 Ga0163163_10006285 3300014325 Bacteria 10371
60 Ga0163163_10323638 3300014325 Bacteria 1595
61 Ga0209566_100203 3300025225 Bacteria 61464
62 Ga0207713_1040063 3300025735 Bacteria 1970
63 Ga0207710_10024929 3300025900 Bacteria 2579
64 Ga0207647_10083594 3300025904 Bacteria 1911
65 Ga0207643_10002076 3300025908 Bacteria 11033
66 Ga0207684_10001248 3300025910 Bacteria 28201
67 Ga0207654_10011248 3300025911 Bacteria 4561
68 Ga0207707_10040361 3300025912 Bacteria 4076
69 Ga0207657_10029268 3300025919 Bacteria 5015
70 Ga0207649_10002292 3300025920 Bacteria 10764
71 Ga0207652_10005388 3300025921 Bacteria 10382
72 Ga0207646_10054749 3300025922 Bacteria 3568
73 Ga0207694_10000013 3300025924 Bacteria 384823
74 Ga0207650_10002863 3300025925 Bacteria 11917
75 Ga0207659_10028015 3300025926 Bacteria 3822
76 Ga0207644_10005580 3300025931 Bacteria 8190
77 Ga0207644_10045356 3300025931 Bacteria 3127
78 Ga0207706_10000741 3300025933 Bacteria 34035
79 Ga0207706_10023491 3300025933 Bacteria 5538
80 Ga0207670_10036590 3300025936 Bacteria 3193
81 Ga0207711_10000400 3300025941 Bacteria 45796
82 Ga0207689_10000187 3300025942 Bacteria 53919
83 Ga0207661_10007069 3300025944 Bacteria 7968
84 Ga0207679_10003356 3300025945 Bacteria 9880
85 Ga0207667_10043718 3300025949 Bacteria 4753
86 Ga0207658_10085720 3300025986 Bacteria 2427
87 Ga0207677_10029455 3300026023 Bacteria 3489
88 Ga0207678_10001304 3300026067 Bacteria 23126
89 Ga0207641_10012905 3300026088 Bacteria 6854
90 Ga0207676_10004752 3300026095 Bacteria 9634
91 Ga0207675_100157111 3300026118 Bacteria 2167
92 Ga0207675_100281300 3300026118 Bacteria 1617
93 Ga0207683_10003495 3300026121 Bacteria 13712
94 Ga0207698_10011335 3300026142 Bacteria 5773
95 Ga0209970_1013713 3300027614 Bacteria 1344
96 Ga0209983_1000493 3300027665 Bacteria 8493
97 Ga0209971_1005324 3300027682 Bacteria 3059
98 Ga0209974_10008676 3300027876 Bacteria 3464
99 Ga0268266_10091196 3300028379 Bacteria 2672
100 Ga0268264_10003638 3300028381 Bacteria 13259
101 Ga0307515_10000032 3300028794 Bacteria 358317
102 Ga0307515_10003654 3300028794 Bacteria 32330
103 Ga0307515_10043231 3300028794 Bacteria 7014
104 Ga0265338_10031565 3300028800 Bacteria 5191
105 Ga0265340_10004281 3300031247 Bacteria 8002
106 Ga0265340_10005757 3300031247 Bacteria 6851
107 Ga0307509_10000003 3300031507 Bacteria 577578
108 Ga0316575_10053017 3300031665 Bacteria 1615
109 Ga0316579_10003358 3300031691 Bacteria 6225
110 Ga0316579_10054695 3300031691 Bacteria 1871
111 Ga0265314_10001588 3300031711 Bacteria 24991
112 Ga0265314_10007997 3300031711 Bacteria 9117
113 Ga0316576_10001693 3300031727 Bacteria 12079
114 Ga0316576_10005647 3300031727 Bacteria 7682
115 Ga0316576_10073902 3300031727 Bacteria 2520
116 Ga0316576_10081285 3300031727 Bacteria 2404
117 Ga0316576_10088710 3300031727 Bacteria 2302
118 Ga0316576_10129613 3300031727 Bacteria 1897
119 Ga0316578_10001015 3300031728 Bacteria 10759
120 Ga0316578_10009737 3300031728 Bacteria 4954
121 Ga0316578_10022751 3300031728 Archaea 3500
122 Ga0316578_10056074 3300031728 Bacteria 2314
123 Ga0316577_10005872 3300031733 Bacteria 6460
124 Ga0316577_10051931 3300031733 Bacteria 2287
125 Ga0307410_10030405 3300031852 Bacteria 3452
126 Ga0307412_10177687 3300031911 Bacteria 1598
127 Ga0316583_10000098 3300032133 Bacteria 19430
128 Ga0316583_10000384 3300032133 Bacteria 12781
129 Ga0316585_10003529 3300032137 Bacteria 4304
130 Ga0316585_10017611 3300032137 Bacteria 2161
131 Ga0316580_10024284 3300032139 Bacteria 1873
132 Ga0316593_10000356 3300032168 Bacteria 8042
133 Ga0316593_10007229 3300032168 Bacteria 3042
134 Ga0316593_10016823 3300032168 Bacteria 2222
135 Ga0316592_1000931 3300033524 Bacteria 4461
136 Ga0316596_1001698 3300033541 Bacteria 4552
137 Ga0316596_1004701 3300033541 Bacteria 3081
138 Ga0373930_0010653 3300034816 Bacteria 1648
139 Ga0373948_0004469 3300034817 Bacteria 2214
140 Ga0373959_0000378 3300034820 Bacteria 8812
141 Ga0373932_0000084 3300035112 Bacteria 24531
142 Ga0373953_0061510 3300035117 Bacteria 1536
143 Ga0316574_0004276 3300035398 Bacteria 7459
144 Ga0316574_0011791 3300035398 Bacteria 4978
145 Ga0316574_0013989 3300035398 Bacteria 4627
146 Ga0316574_0014118 3300035398 Bacteria 4608
147 Ga0316574_0191560 3300035398 Bacteria 1315
148 Ga0373927_0004412 3300035695 Bacteria 9863
149 Ga0316582_0010457 3300036647 Bacteria 5083
150 Ga0316582_0031182 3300036647 Archaea 3256
151 Ga0316582_0129355 3300036647 Bacteria 1695
152 Ga0316584_0001722 3300036712 Bacteria 13417
153 Ga0316584_0003089 3300036712 Bacteria 10736
154 Ga0316584_0028840 3300036712 Bacteria 4096
155 Ga0316584_0061269 3300036712 Bacteria 2818
156 Ga0316584_0130098 3300036712 Bacteria 1880
157 Ga0373925_0000351 3300037068 Bacteria 47965
158 Ga0395899_0012682 3300037312 Bacteria 6460
159 Ga0395900_0035068 3300037418 Bacteria 5168
160 Ga0395905_0025757 3300037471 Bacteria 5545
161 Ga0316581_0000300 3300037588 Bacteria 8827
162 Ga0316581_0007936 3300037588 Bacteria 2871
163 Ga0316581_0019398 3300037588 Bacteria 1983
164 Ga0395901_0038665 3300038443 Bacteria 4935
165 Ga0237819_00040 3300038705 Bacteria 45528
166 Ga0436360_0064754 3300039438 Bacteria 2136
167 Ga0436361_0804607 3300039447 Bacteria 2990
168 Ga0451791_0132294 3300041451 Bacteria 4691
169 Ga0451807_0633514 3300041486 Bacteria 4674
170 Ga0451577_0008178 3300042876 Bacteria 10196
171 Ga0451577_0016709 3300042876 Bacteria 6786
172 Ga0451577_0016879 3300042876 Bacteria 6752
173 Ga0451577_0040357 3300042876 Bacteria 4190
174 Ga0451577_0093219 3300042876 Bacteria 2689
175 Ga0466972_0005967 3300044658 Bacteria 6117
176 Ga0466965_0003209 3300044683 Bacteria 7146
177 Ga0466961_0014731 3300044693 Bacteria 5025
178 Ga0453684_0021496 3300044712 Bacteria 9635
179 Ga0453684_0026226 3300044712 Bacteria 8429
180 Ga0453684_0059554 3300044712 Bacteria 4921
181 Ga0453684_0235163 3300044712 Bacteria 2113
182 Ga0451576_0095049 3300045051 Bacteria 3100
183 Ga0451576_0109771 3300045051 Bacteria 2871
184 Ga0495654_0026329 3300046530 Bacteria 2990
185 Ga0495621_0000629 3300046539 Bacteria 8876
186 Ga0495656_0004714 3300046615 Bacteria 4687
187 Ga0496100_0040429 3300048903 Bacteria 2967
188 Ga0496101_0098276 3300048904 Bacteria 2187
189 Ga0496102_0028415 3300048905 Bacteria 4995
190 Ga0496105_0018189 3300048908 Bacteria 5642
191 Ga0496107_0021477 3300048910 Bacteria 4562
192 Ga0496108_0012162 3300048911 Bacteria 6998
193 Ga0496111_0003662 3300048914 Bacteria 9540
194 Ga0496112_0095934 3300048915 Bacteria 2936
195 Ga0496112_0209971 3300048915 Bacteria 1904
196 Ga0496113_0009234 3300048916 Bacteria 6469
197 Ga0496113_0071004 3300048916 Bacteria 2648
198 Ga0496115_0066548 3300048918 Bacteria 2912
199 Ga0496117_0058306 3300048920 Bacteria 2675
200 Ga0496118_0004040 3300048921 Bacteria 17827
201 Ga0501306_000234 3300049127 Bacteria 3772
202 Ga0501343_000124 3300049132 Bacteria 3571
203 Ga0501343_000693 3300049132 Bacteria 2077
204 Ga0501345_00167 3300049134 Bacteria 1861
205 Ga0501305_000308 3300049161 Bacteria 3819
206 Ga0501307_000813 3300049162 Bacteria 2362
207 Ga0501311_000493 3300049527 Bacteria 2790
208 Ga0501311_004382 3300049527 Bacteria 1499
209 Ga0501312_000123 3300049528 Bacteria 4793
210 Ga0501312_002146 3300049528 Bacteria 2091
211 Ga0501315_000203 3300049531 Bacteria 3593
212 Ga0501316_002115 3300049532 Bacteria 1802
213 Ga0501317_000064 3300049533 Bacteria 4977
214 Ga0501317_000136 3300049533 Bacteria 4021
215 Ga0501320_002544 3300049536 Bacteria 1467
216 Ga0501321_000238 3300049537 Bacteria 3173
217 Ga0501321_000245 3300049537 Bacteria 3152
218 Ga0501323_000358 3300049539 Bacteria 3256
219 Ga0501323_000477 3300049539 Bacteria 2999
220 Ga0501331_00317 3300049547 Bacteria 1905
221 Ga0501333_000333 3300049549 Bacteria 2054
222 Ga0501335_000034 3300049551 Bacteria 5446
223 Ga0501336_000244 3300049552 Bacteria 2449
224 Ga0501340_000207 3300049556 Bacteria 2220
225 Ga0501032_0157068 3300049569 Bacteria 1494
226 Ga0501080_0054346 3300049742 Bacteria 3729
227 Ga0501035_0123745 3300049822 Bacteria 2259
228 nmdc:mga0yw44_114688_c1 3300050492 Bacteria 1730
229 nmdc:mga06z11_98366_c1 3300050494 Bacteria 1601
230 nmdc:mga05p37_197683_c1 3300050507 Bacteria 2437
231 nmdc:mga05p37_770_c1 3300050507 Bacteria 35623
232 nmdc:mga09592_1_c1 3300050508 Bacteria 201102
233 nmdc:mga0qj67_12_c1 3300050509 Bacteria 76377
234 nmdc:mga06r32_7_c1 3300050510 Bacteria 117700
235 nmdc:mga08y16_266203_c1 3300050511 Bacteria 1770
236 nmdc:mga0n895_16639_c1 3300050512 Bacteria 6754
237 nmdc:mga08x19_41574_c1 3300050514 Bacteria 2928
238 nmdc:mga0a205_10407_c1 3300050515 Bacteria 8548
239 Ga0500583_0032893 3300053092 Bacteria 2291
240 Ga0500641_0004062 3300053096 Bacteria 5167
241 Ga0500628_000506 3300053129 Bacteria 7265
242 Ga0500622_0028810 3300053156 Bacteria 2922
243 Ga0500611_001094 3300053727 Bacteria 2881
244 2515757536 2515154137 Bacteria 5711575
245 2587740822 2585428059 Bacteria 8696589
246 2644427786 2643221676 Bacteria 8119172
247 2676199631 2675902999 Bacteria 9438463
248 2689956458 2687453737 Bacteria 11203906
249 2774844209 2773857921 Bacteria 9435764
250 2819672093 2818991459 Bacteria 8736032
251 2857455887 2857453340 Bacteria 8090534
252 2857464057 2857460504 Bacteria 5194327
253 2904758996 2904755435 Bacteria 7986759
254 2919426205 2919425241 Bacteria 8055701
255 2971412095 2971410472 Bacteria 8311090
256 8056535097 8056533031 Bacteria 8964429
257 Ga0307408_100143176
258 SwRhRL2b_contig_1005527
259 JGI25406J46586_10014109
260 rootH1_10143354
261 Ga0006562J51391_1004836
262 Ga0065704_10000411
263 Ga0070658_10043896
264 Ga0070670_100003677
265 Ga0068869_100001245
266 Ga0070680_100092433
267 Ga0068868_100007359
268 Ga0070689_100026643
269 Ga0070692_10002493
270 Ga0070675_100013556
271 Ga0070671_100002954
272 Ga0070671_100008360
273 Ga0070673_100008126
274 Ga0070663_100003424
275 Ga0070662_100000428
276 Ga0070662_100086108
277 Ga0070681_10076299
278 Ga0070685_10002801
279 Ga0070685_10029761
280 Ga0070706_100008206
281 Ga0070706_100068216
282 Ga0070686_100000015
283 Ga0068855_100137523
284 Ga0070702_100002847
285 Ga0068851_10021990
286 Ga0068870_10001037
287 Ga0068863_100006203
288 Ga0068858_100048458
289 Ga0068858_100300993
290 Ga0068860_100002328
291 Ga0081540_1000117
292 Ga0081539_10000095
293 Ga0075367_10113481
294 Ga0097621_100006415
295 Ga0097621_100214794
296 Ga0075428_100106216
297 Ga0075430_100010166
298 Ga0075431_100049848
299 Ga0075433_10005579
300 Ga0075434_100002856
301 Ga0075429_100005038
302 Ga0075436_100002169
303 Ga0075435_100006462
304 Ga0105251_10008366
305 Ga0105245_10427942
306 Ga0105247_10014261
307 Ga0114129_10000016
308 Ga0114129_10210574
309 Ga0105248_10000473
310 Ga0105238_10000025
311 Ga0157327_1001502
312 Ga0157370_10025448
313 Ga0157372_10028842
314 Ga0157372_10423255
315 Ga0163163_10006285
316 Ga0163163_10323638
317 Ga0209566_100203
318 Ga0207713_1040063
319 Ga0207710_10024929
320 Ga0207647_10083594
321 Ga0207643_10002076
322 Ga0207684_10001248
323 Ga0207654_10011248
324 Ga0207707_10040361
325 Ga0207657_10029268
326 Ga0207649_10002292
327 Ga0207652_10005388
328 Ga0207646_10054749
329 Ga0207694_10000013
330 Ga0207650_10002863
331 Ga0207659_10028015
332 Ga0207644_10005580
333 Ga0207644_10045356
334 Ga0207706_10000741
335 Ga0207706_10023491
336 Ga0207670_10036590
337 Ga0207711_10000400
338 Ga0207689_10000187
339 Ga0207661_10007069
340 Ga0207679_10003356
341 Ga0207667_10043718
342 Ga0207658_10085720
343 Ga0207677_10029455
344 Ga0207678_10001304
345 Ga0207641_10012905
346 Ga0207676_10004752
347 Ga0207675_100157111
348 Ga0207675_100281300
349 Ga0207683_10003495
350 Ga0207698_10011335
351 Ga0209970_1013713
352 Ga0209983_1000493
353 Ga0209971_1005324
354 Ga0209974_10008676
355 Ga0268266_10091196
356 Ga0268264_10003638
357 Ga0307515_10000032
358 Ga0307515_10003654
359 Ga0307515_10043231
360 Ga0265338_10031565
361 Ga0265340_10004281
362 Ga0265340_10005757
363 Ga0307509_10000003
364 Ga0316575_10053017
365 Ga0316579_10003358
366 Ga0316579_10054695
367 Ga0265314_10001588
368 Ga0265314_10007997
369 Ga0316576_10001693
370 Ga0316576_10005647
371 Ga0316576_10073902
372 Ga0316576_10081285
373 Ga0316576_10088710
374 Ga0316576_10129613
375 Ga0316578_10001015
376 Ga0316578_10009737
377 Ga0316578_10022751
378 Ga0316578_10056074
379 Ga0316577_10005872
380 Ga0316577_10051931
381 Ga0307410_10030405
382 Ga0307412_10177687
383 Ga0316583_10000098
384 Ga0316583_10000384
385 Ga0316585_10003529
386 Ga0316585_10017611
387 Ga0316580_10024284
388 Ga0316593_10000356
389 Ga0316593_10007229
390 Ga0316593_10016823
391 Ga0316592_1000931
392 Ga0316596_1001698
393 Ga0316596_1004701
394 Ga0373930_0010653
395 Ga0373948_0004469
396 Ga0373959_0000378
397 Ga0373932_0000084
398 Ga0373953_0061510
399 Ga0316574_0004276
400 Ga0316574_0011791
401 Ga0316574_0013989
402 Ga0316574_0014118
403 Ga0316574_0191560
404 Ga0373927_0004412
405 Ga0316582_0010457
406 Ga0316582_0031182
407 Ga0316582_0129355
408 Ga0316584_0001722
409 Ga0316584_0003089
410 Ga0316584_0028840
411 Ga0316584_0061269
412 Ga0316584_0130098
413 Ga0373925_0000351
414 Ga0395899_0012682
415 Ga0395900_0035068
416 Ga0395905_0025757
417 Ga0316581_0000300
418 Ga0316581_0007936
419 Ga0316581_0019398
420 Ga0395901_0038665
421 Ga0237819_00040
422 Ga0436360_0064754
423 Ga0436361_0804607
424 Ga0451791_0132294
425 Ga0451807_0633514
426 Ga0451577_0008178
427 Ga0451577_0016709
428 Ga0451577_0016879
429 Ga0451577_0040357
430 Ga0451577_0093219
431 Ga0466972_0005967
432 Ga0466965_0003209
433 Ga0466961_0014731
434 Ga0453684_0021496
435 Ga0453684_0026226
436 Ga0453684_0059554
437 Ga0453684_0235163
438 Ga0451576_0095049
439 Ga0451576_0109771
440 Ga0495654_0026329
441 Ga0495621_0000629
442 Ga0495656_0004714
443 Ga0496100_0040429
444 Ga0496101_0098276
445 Ga0496102_0028415
446 Ga0496105_0018189
447 Ga0496107_0021477
448 Ga0496108_0012162
449 Ga0496111_0003662
450 Ga0496112_0095934
451 Ga0496112_0209971
452 Ga0496113_0009234
453 Ga0496113_0071004
454 Ga0496115_0066548
455 Ga0496117_0058306
456 Ga0496118_0004040
457 Ga0501306_000234
458 Ga0501343_000124
459 Ga0501343_000693
460 Ga0501345_00167
461 Ga0501305_000308
462 Ga0501307_000813
463 Ga0501311_000493
464 Ga0501311_004382
465 Ga0501312_000123
466 Ga0501312_002146
467 Ga0501315_000203
468 Ga0501316_002115
469 Ga0501317_000064
470 Ga0501317_000136
471 Ga0501320_002544
472 Ga0501321_000238
473 Ga0501321_000245
474 Ga0501323_000358
475 Ga0501323_000477
476 Ga0501331_00317
477 Ga0501333_000333
478 Ga0501335_000034
479 Ga0501336_000244
480 Ga0501340_000207
481 Ga0501032_0157068
482 Ga0501080_0054346
483 Ga0501035_0123745
484 nmdc:mga0yw44_114688_c1
485 nmdc:mga06z11_98366_c1
486 nmdc:mga05p37_197683_c1
487 nmdc:mga05p37_770_c1
488 nmdc:mga09592_1_c1
489 nmdc:mga0qj67_12_c1
490 nmdc:mga06r32_7_c1
491 nmdc:mga08y16_266203_c1
492 nmdc:mga0n895_16639_c1
493 nmdc:mga08x19_41574_c1
494 nmdc:mga0a205_10407_c1
495 Ga0500583_0032893
496 Ga0500641_0004062
497 Ga0500628_000506
498 Ga0500622_0028810
499 Ga0500611_001094
500 2515757536
501 2587740822
502 2644427786
503 2676199631
504 2689956458
505 2774844209
506 2819672093
507 2857455887
508 2857464057
509 2904758996
510 2919426205
511 2971412095
512 8056535097

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00266

Aminotran_5

Aminotransferase class-V

72

452

0.97

PF00155

Aminotran_1_2

Aminotransferase class I and II

73

292

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
6c9e-assembly1.cif.gz_A crystal structure of cysteine desulfurase from legionella pneumophila philadelphia 1 0.9933 16 418
4w91-assembly5.cif.gz_I crystal structure of a cysteine desulfurase sufs from brucella suis bound to plp 0.9907 15 418
4w91-assembly3.cif.gz_E crystal structure of a cysteine desulfurase sufs from brucella suis bound to plp 0.9906 15 418
7e6e-assembly1.cif.gz_A crystal structure of pmp-bound form of cysteine desulfurase sufs r376a from bacillus subtilis in d-cycloserine-inhibition 0.9898 15 417
6wci-assembly1.cif.gz_B crystal structure of a cysteine desulfurase sufs from stenotrophomonas maltophilia k279a 0.9898 15 416
ID Description Score Start End Superfamily
af_A0A368UH16_90_350_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9904 48 307 3.40.640.10
af_Q2FZY5_42_298_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9899 48 304 3.40.640.10
1i29A02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9883 51 307 3.40.640.10
4w91J02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9869 47 307 3.40.640.10
af_Q0INV6_1_200_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9863 101 299 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A515KL27-F1-model_v4 cysteine desulfurase (EC 2.8.1.7) 0.9949 16 418 GO:0006534
GO:0030170
GO:0031071
AF-A0A352IRB3-F1-model_v4 Cysteine desulfurase CsdA 0.9948 138 285
AF-A0A3M1HW76-F1-model_v4 Cysteine desulfurase (EC 2.8.1.7) 0.9938 15 418 GO:0006534
GO:0030170
GO:0031071
AF-A0A3C0HIN7-F1-model_v4 cysteine desulfurase (EC 2.8.1.7) 0.9927 89 418 GO:0006534
GO:0016020
GO:0030170
GO:0031071
AF-A0A543QVT9-F1-model_v4 deleted 0.9924 16 418

Map