F366122

General Info

Members Datasets Scaffolds Average Seq Length
255 193 512 395

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|640427133|640489428
Length 449
Sequence VRLRATAYAPHLRPPPPGGGGCRWHGTRRGWNDCQSQRPAAGGTKNKKPRGTRSMNTKFWCLATIGLAATFSLPLPALAAIEEGKLVVWINGDKGYKGLAEVGKRFTAETGIPVEVAHPDSATDKFQQAAATGNGPDIFIWAHDRIGEWAKSGLLTPVTPSAETKSGIADFSWQAVTYDNKLWGYPISVETIGLIYNKALVDTPPKSFDDVLALNETLAPQGKRAILWDYNNTYFTWPLLSAKGGYVFEQTDGGYNVKSTGVNNAGAKAGAKVLRELIDKGVMPKGADYSVAEAAFNKGDSAMMISGPWAWSNIEKSGIDFGVAPIPAIDGEAGKPFVGVAAALLNAASPNKDLAVEFLENYLLEVDGLKTVNADVPLGAVANTAYMEELSSNPHIKATFENAQMGQPMPNVPEMGAFWSSMAAALTNITSGRQDVDAALDDAAKRITR

Samples

Sample ID Description Type Environment
1 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
2 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
3 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
4 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
7 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
8 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
9 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
10 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
11 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
12 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
13 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
14 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
15 3300004801 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
16 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
17 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
18 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
19 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
20 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
21 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
22 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
23 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
24 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
33 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
34 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
35 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
36 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
37 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
38 3300012497 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510 Metagenome Rhizosphere
39 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
40 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
41 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
42 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
43 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
44 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
45 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
46 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
49 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
51 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
52 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
54 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
56 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
58 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
76 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
78 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
79 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
80 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
81 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
82 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
83 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
84 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
85 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
86 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
87 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
88 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
89 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
90 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
91 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
92 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
93 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
94 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
95 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
96 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
97 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
98 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
99 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
100 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
101 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
102 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
103 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
104 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
105 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
106 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
107 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
108 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
109 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
110 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
111 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
112 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
113 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
114 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
115 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
116 3300042000 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z081617_5539 Metagenome Rhizosphere
117 3300042126 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0218F_E14_070516_87 Metagenome Rhizosphere
118 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
119 3300042130 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030L_E14_070516_97 Metagenome Rhizosphere
120 3300042144 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624F_E14_070516_89 Metagenome Rhizosphere
121 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
122 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
123 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
124 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
125 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
126 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
127 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
128 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
129 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
130 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
131 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
132 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
133 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
134 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
135 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
136 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
137 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
138 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
139 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
140 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
141 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
142 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
143 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
144 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
145 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
146 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
147 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
148 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
149 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
150 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
151 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
152 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049658 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F3_B_0_drought Metagenome Rhizosphere
155 3300049757 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_B_2_control Metagenome Rhizosphere
156 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
157 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
158 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
159 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
160 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
161 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
162 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
163 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
164 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
165 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
166 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
167 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
168 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
169 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
170 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
171 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
172 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
173 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
174 640427133 Stutzerimonas stutzeri A1501 Isolate Rhizosphere
175 2600255292 Janthinobacterium lividum NFR18 Isolate Rhizoplane
176 2643221544 Pelomonas sp. Root1444 Isolate Unclassified
177 2643221585 Pelomonas sp. Root662 Isolate Unclassified
178 2643221639 Pelomonas sp. Root1217 Isolate Unclassified
179 2643221646 Pelomonas sp. Root1237 Isolate Unclassified
180 2643221656 Pelomonas sp. Root405 Isolate Unclassified
181 2728369097 Stutzerimonas balearica st101 Isolate Unclassified
182 2738541337 Pelomonas sp. BT06 Isolate Unclassified
183 2831864461 Roseateles noduli HZ7 Isolate Nodule
184 2846037992 Chromobacterium alticapitis MWU14-2602 Isolate Rhizosphere
185 2857547612 Janthinobacterium sp. R-74502 Isolate Unclassified
186 2885080285 Janthinobacterium sp. AD80 Isolate Rhizosphere
187 2886848708 Mitsuaria sp. TWR114 Isolate Rhizosphere
188 2919493220 Aeromonas salmonicida salmonicida 3466 Isolate Unclassified
189 2919543075 Aeromonas salmonicida masoucida 4076 Isolate Unclassified
190 2923525760 Aeromonas caviae SLBN-129 Isolate Rhizosphere
191 2932410948 Janthinobacterium lividum 2829 Isolate Rhizosphere
192 2932416698 Janthinobacterium lividum 2830 Isolate Rhizosphere
193 651053060 Stutzerimonas stutzeri CMT.A.9 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.76
Metatranscriptomes 0.39
Isolates 7.84

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 21.57
Nodule 1.18
Rhizoplane 0.78
Rhizosphere 55.29
Stem 0
Stem Tuber 0
Unclassified 1.96

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25156J39149_1000683 3300002705 Bacteria 18228
2 JGI25154J39366_1003575 3300002738 Bacteria 3190
3 JGI25157J39369_1000049 3300002741 Bacteria 115611
4 rootH1_10006570 3300003316 Bacteria 1876
5 rootH1_10006571 3300003316 Bacteria 2781
6 rootH1_10006572 3300003316 Bacteria 3736
7 rootH1_10008379 3300003316 Bacteria 23693
8 rootH1_10008379 3300003323 Bacteria 2024
9 rootH2_10001174 3300003320 Bacteria 13967
10 rootL2_10003946 3300003322 Bacteria 2727
11 rootL2_10005014 3300003322 Bacteria 29072
12 rootH1_10000852 3300003323 Bacteria 55220
13 rootH1_10008428 3300003316 Bacteria 1574
14 rootH1_10008428 3300003323 Bacteria 3403
15 rootH1_10014650 3300003323 Bacteria 10849
16 rootH1_10044092 3300003323 Bacteria 1832
17 rootH1_10046070 3300003323 Bacteria 2620
18 rootH1_10057935 3300003323 Bacteria 2479
19 rootH1_10059116 3300003323 Bacteria 3261
20 Ga0055539_1000338 3300003752 Bacteria 21884
21 Ga0055539_1000616 3300003752 Bacteria 9642
22 Ga0055533_1000010 3300003756 Bacteria 491196
23 Ga0055525_1000054 3300003759 Bacteria 216523
24 Ga0055525_1001286 3300003759 Bacteria 5172
25 Ga0055535_1000121 3300003761 Bacteria 83760
26 Ga0055529_1000223 3300003763 Bacteria 72861
27 Ga0055524_1000417 3300003775 Bacteria 35861
28 Ga0055531_10000568 3300003794 Bacteria 32319
29 Ga0055531_10011827 3300003794 Bacteria 4165
30 Ga0055531_10015791 3300003794 Bacteria 3301
31 Ga0058860_12180500 3300004801 Bacteria 1453
32 Ga0065165_1000181 3300005262 Bacteria 110867
33 Ga0065165_1000193 3300005262 Bacteria 106706
34 Ga0070690_100026687 3300005330 Bacteria 3565
35 Ga0070690_100170710 3300005330 Bacteria 1496
36 Ga0068869_100064868 3300005334 Bacteria 2687
37 Ga0070682_100009999 3300005337 Bacteria 5373
38 Ga0070673_100000912 3300005364 Bacteria 16684
39 Ga0070688_100066386 3300005365 Bacteria 2296
40 Ga0070688_100117558 3300005365 Bacteria 1776
41 Ga0070711_100088445 3300005439 Bacteria 2226
42 Ga0070706_100004433 3300005467 Bacteria 13561
43 Ga0070693_100000783 3300005547 Bacteria 14043
44 Ga0068855_100059018 3300005563 Bacteria 4490
45 Ga0068855_100088345 3300005563 Bacteria 3580
46 Ga0068855_100213663 3300005563 Bacteria 2166
47 Ga0068857_100022397 3300005577 Bacteria 5558
48 Ga0068854_100001635 3300005578 Bacteria 13642
49 Ga0068856_100000458 3300005614 Bacteria 44947
50 Ga0068866_10065382 3300005718 Bacteria 1902
51 Ga0068863_100061904 3300005841 Bacteria 3539
52 Ga0068860_100095494 3300005843 Bacteria 2834
53 Ga0070717_10051347 3300006028 Bacteria 3393
54 Ga0075366_10002454 3300006195 Bacteria 9494
55 Ga0075366_10015912 3300006195 Bacteria 4318
56 Ga0075366_10036394 3300006195 Bacteria 2902
57 Ga0075370_10001314 3300006353 Bacteria 10640
58 Ga0099823_1003280 3300006944 Bacteria 15226
59 Ga0105243_10049583 3300009148 Bacteria 3313
60 Ga0105249_10015010 3300009553 Bacteria 6852
61 Ga0157319_1000001 3300012497 Bacteria 423237
62 Ga0157369_10060083 3300013105 Bacteria 4099
63 Ga0157378_10084680 3300013297 Bacteria 2871
64 Ga0157378_10089775 3300013297 Bacteria 2792
65 Ga0157378_10164259 3300013297 Bacteria 2079
66 Ga0182008_10001236 3300014497 Bacteria 17537
67 Ga0182006_1000035 3300015261 Bacteria 232349
68 Ga0182007_10001662 3300015262 Bacteria 11780
69 Ga0182005_1000025 3300015265 Bacteria 235532
70 Ga0213872_10000045 3300021361 Bacteria 112229
71 Ga0213872_10000082 3300021361 Bacteria 88238
72 Ga0213872_10000183 3300021361 Bacteria 56352
73 Ga0213872_10000271 3300021361 Bacteria 44619
74 Ga0213872_10006316 3300021361 Bacteria 5967
75 Ga0213872_10027248 3300021361 Bacteria 2624
76 Ga0213872_10036752 3300021361 Bacteria 2237
77 Ga0209674_100003 3300025226 Bacteria 2196646
78 Ga0209563_100075 3300025230 Bacteria 216575
79 Ga0209563_100154 3300025230 Bacteria 64699
80 Ga0207427_100757 3300025231 Bacteria 14724
81 Ga0209258_100163 3300025242 Bacteria 149677
82 Ga0209258_100395 3300025242 Bacteria 54935
83 Ga0209646_1000138 3300025246 Bacteria 114892
84 Ga0209026_1000021 3300025250 Bacteria 375165
85 Ga0209677_100093 3300025253 Bacteria 101695
86 Ga0209677_100484 3300025253 Bacteria 22615
87 Ga0209677_101457 3300025253 Bacteria 10221
88 Ga0209759_1000025 3300025256 Bacteria 317082
89 Ga0209759_1000923 3300025256 Bacteria 21432
90 Ga0209759_1001069 3300025256 Bacteria 17985
91 Ga0209455_1000059 3300025272 Bacteria 339995
92 Ga0209564_1000005 3300025295 Bacteria 1147192
93 Ga0209050_1001838 3300025298 Bacteria 20590
94 Ga0209050_1001926 3300025298 Bacteria 19776
95 Ga0209256_1000078 3300025299 Bacteria 225992
96 Ga0209256_1000630 3300025299 Bacteria 48400
97 Ga0209051_1000855 3300025303 Bacteria 31073
98 Ga0209051_1003450 3300025303 Bacteria 10361
99 Ga0209257_1000103 3300025304 Bacteria 245859
100 Ga0209257_1000358 3300025304 Bacteria 93161
101 Ga0209257_1003965 3300025304 Bacteria 11990
102 Ga0207684_10000633 3300025910 Bacteria 41813
103 Ga0207695_10054829 3300025913 Bacteria 4159
104 Ga0207657_10057106 3300025919 Bacteria 3365
105 Ga0207709_10020450 3300025935 Bacteria 3733
106 Ga0207670_10058005 3300025936 Bacteria 2629
107 Ga0207665_10206413 3300025939 Bacteria 1433
108 Ga0207691_10050991 3300025940 Bacteria 3786
109 Ga0207689_10004417 3300025942 Bacteria 12765
110 Ga0207689_10163569 3300025942 Unclassified 1833
111 Ga0207667_10131636 3300025949 Bacteria 2576
112 Ga0207651_10021456 3300025960 Bacteria 3926
113 Ga0207640_10014536 3300025981 Bacteria 4536
114 Ga0207708_10160031 3300026075 Bacteria 1778
115 Ga0207702_10000227 3300026078 Bacteria 65464
116 Ga0207674_10031617 3300026116 Bacteria 5557
117 Ga0207675_100008499 3300026118 Bacteria 9663
118 Ga0209389_1001985 3300027296 Bacteria 15154
119 Ga0268266_10372764 3300028379 Bacteria 1345
120 Ga0265336_10000051 3300028666 Bacteria 114796
121 Ga0307517_10068141 3300028786 Bacteria 3246
122 Ga0307515_10086622 3300028794 Bacteria 3990
123 Ga0265324_10000683 3300029957 Bacteria 22779
124 Ga0307511_10062908 3300030521 Bacteria 2810
125 Ga0265332_10002021 3300031238 Bacteria 10634
126 Ga0265331_10005028 3300031250 Bacteria 8101
127 Ga0265327_10000028 3300031251 Bacteria 361066
128 Ga0307513_10011567 3300031456 Bacteria 10959
129 Ga0307509_10000039 3300031507 Bacteria 185329
130 Ga0307509_10054750 3300031507 Bacteria 4245
131 Ga0307408_100000029 3300031548 Bacteria 227806
132 Ga0307508_10008138 3300031616 Bacteria 9719
133 Ga0265314_10027505 3300031711 Bacteria 4258
134 Ga0307516_10041810 3300031730 Bacteria 4552
135 Ga0307516_10053556 3300031730 Bacteria 3945
136 Ga0307405_10119838 3300031731 Bacteria 1799
137 Ga0307406_10005361 3300031901 Bacteria 7019
138 Ga0307414_10126509 3300032004 Bacteria 1975
139 Ga0307411_10000389 3300032005 Bacteria 15007
140 Ga0307507_10103117 3300033179 Bacteria 2376
141 Ga0373948_0001967 3300034817 Bacteria 2957
142 Ga0373934_0004249 3300035086 Bacteria 5285
143 Ga0373949_0000165 3300035090 Bacteria 25128
144 Ga0373923_0095401 3300035111 Bacteria 1306
145 Ga0373936_0000002 3300035113 Bacteria 452874
146 Ga0373939_0000069 3300035114 Bacteria 33328
147 Ga0373956_0016133 3300035119 Bacteria 3134
148 Ga0373960_0006015 3300035121 Bacteria 2829
149 Ga0373961_0000009 3300035241 Bacteria 136228
150 Ga0373931_0000202 3300035691 Bacteria 25226
151 Ga0395899_0002658 3300037312 Bacteria 14407
152 Ga0395900_0018442 3300037418 Bacteria 7118
153 Ga0395900_0169567 3300037418 Bacteria 2223
154 Ga0395898_0084152 3300037466 Bacteria 3066
155 Ga0395905_0005956 3300037471 Bacteria 12350
156 Ga0395905_0031038 3300037471 Bacteria 5033
157 Ga0395901_0007466 3300038443 Bacteria 11036
158 Ga0400489_41798 3300039093 Bacteria 8293
159 Ga0436360_0709716 3300039438 Bacteria 8521
160 Ga0436360_0742391 3300039438 Bacteria 1539
161 Ga0436361_0248333 3300039447 Bacteria 14022
162 Ga0436361_0524686 3300039447 Bacteria 114368
163 Ga0436361_0528490 3300039447 Bacteria 4995
164 Ga0436361_0656892 3300039447 Bacteria 2996
165 Ga0436361_0779227 3300039447 Bacteria 5474
166 Ga0436361_0848343 3300039447 Bacteria 176869
167 Ga0436361_0989640 3300039447 Bacteria 18349
168 Ga0436361_1072915 3300039447 Bacteria 5669
169 Ga0436363_1314638 3300039450 Bacteria 6670
170 Ga0436362_0991516 3300039453 Unclassified 1386
171 Ga0439437_002730 3300042000 Bacteria 1900
172 Ga0450888_004634 3300042126 Bacteria 1441
173 Ga0450890_001376 3300042127 Bacteria 3506
174 Ga0450892_000190 3300042130 Bacteria 7169
175 Ga0450889_000737 3300042144 Bacteria 3512
176 Ga0439446_0000054 3300042156 Bacteria 17693
177 Ga0439434_0022718 3300042435 Bacteria 1886
178 Ga0450893_0004033 3300042532 Bacteria 2332
179 Ga0466969_0034142 3300044656 Bacteria 2578
180 Ga0466965_0003464 3300044683 Bacteria 6922
181 Ga0466966_0007891 3300044684 Bacteria 7045
182 Ga0466966_0071894 3300044684 Bacteria 2167
183 Ga0466961_0000131 3300044693 Bacteria 50219
184 Ga0466961_0010269 3300044693 Bacteria 5965
185 Ga0466964_0047430 3300044706 Bacteria 1753
186 Ga0453684_0009095 3300044712 Bacteria 17509
187 Ga0466971_0004024 3300044719 Bacteria 6322
188 Ga0466957_0020571 3300044842 Bacteria 3883
189 Ga0466959_0025743 3300045049 Bacteria 4363
190 Ga0495639_0016642 3300046475 Bacteria 3193
191 Ga0495583_0000284 3300046506 Bacteria 81053
192 Ga0495606_0003049 3300046507 Bacteria 18262
193 Ga0495622_0021602 3300046557 Bacteria 2996
194 Ga0495622_0048765 3300046557 Unclassified 1967
195 Ga0495633_0000180 3300046558 Bacteria 82176
196 Ga0495625_0160084 3300046660 Unclassified 1509
197 Ga0495649_0000743 3300046694 Bacteria 26385
198 Ga0495660_0062148 3300046810 Bacteria 2002
199 Ga0495672_0000198 3300047320 Bacteria 85895
200 Ga0495686_0015698 3300047472 Bacteria 5161
201 Ga0495686_0077564 3300047472 Bacteria 2034
202 Ga0496115_0242389 3300048918 Bacteria 1486
203 Ga0496116_0007386 3300048919 Bacteria 9763
204 Ga0496117_0000045 3300048920 Bacteria 301047
205 Ga0496118_0000041 3300048921 Bacteria 301047
206 Ga0496121_0024806 3300048924 Bacteria 5719
207 Ga0496121_0044659 3300048924 Bacteria 3818
208 Ga0496121_0085494 3300048924 Bacteria 2483
209 Ga0496122_0007060 3300048925 Bacteria 12618
210 Ga0496123_0005400 3300048926 Bacteria 12880
211 Ga0496124_0016874 3300048927 Bacteria 6918
212 Ga0501300_000320 3300049523 Bacteria 7292
213 Ga0501040_0000145 3300049576 Bacteria 38616
214 Ga0501042_0001408 3300049578 Bacteria 14136
215 Ga0501042_0033902 3300049578 Bacteria 3620
216 Ga0501211_000297 3300049658 Bacteria 4548
217 Ga0501232_002168 3300049757 Bacteria 1676
218 Ga0501268_014484 3300049765 Bacteria 1285
219 nmdc:mga0k408_4355_c1 3300050493 Bacteria 7514
220 nmdc:mga0k408_4361_c1 3300050493 Bacteria 7511
221 nmdc:mga0k408_9490_c1 3300050493 Bacteria 5247
222 nmdc:mga07m45_15304_c1 3300050496 Bacteria 4095
223 Ga0500635_0000077 3300053080 Bacteria 63561
224 Ga0500578_0018228 3300053086 Bacteria 4512
225 Ga0500583_0002943 3300053092 Bacteria 5248
226 Ga0500566_0028397 3300053094 Bacteria 3270
227 Ga0500640_007243 3300053095 Bacteria 4303
228 Ga0500554_001011 3300053102 Bacteria 5466
229 Ga0500572_006609 3300053111 Bacteria 2660
230 Ga0500595_000145 3300053119 Bacteria 46383
231 Ga0500614_032337 3300053123 Unclassified 1287
232 Ga0500559_0002833 3300053136 Bacteria 8761
233 Ga0500603_000981 3300053150 Bacteria 6744
234 Ga0500622_0000990 3300053156 Bacteria 24002
235 Ga0500639_041043 3300053163 Bacteria 2434
236 Ga0500636_0036934 3300053177 Bacteria 2891
237 Ga0590071_002263 3300059421 Bacteria 4881
238 640489428 640427133 Bacteria 4567418
239 2601669994 2600255292 Bacteria 6300551
240 2643746607 2643221544 Bacteria 5886209
241 2643935538 2643221585 Bacteria 5812563
242 2644221007 2643221639 Bacteria 6649903
243 2644259852 2643221646 Bacteria 6433402
244 2644317321 2643221656 Bacteria 5809961
245 2729145721 2728369097 Bacteria 4333476
246 2739057512 2738541337 Bacteria 6183410
247 2831868538 2831864461 Bacteria 6502356
248 2846038662 2846037992 Bacteria 4526407
249 2857550940 2857547612 Bacteria 6179999
250 2885082646 2885080285 Bacteria 6355622
251 2886850535 2886848708 Bacteria 5632523
252 2919496041 2919493220 Bacteria 4598500
253 2919544319 2919543075 Bacteria 4728703
254 2923527919 2923525760 Bacteria 4472324
255 2932413483 2932410948 Bacteria 6312192
256 2932417543 2932416698 Bacteria 6315112
257 651177454 651053060 Bacteria 4689946
258 JGI25156J39149_1000683
259 JGI25154J39366_1003575
260 JGI25157J39369_1000049
261 rootH1_10006570
262 rootH1_10006571
263 rootH1_10006572
264 rootH1_10008379
265 rootH2_10001174
266 rootL2_10003946
267 rootL2_10005014
268 rootH1_10000852
269 rootH1_10008428
270 rootH1_10014650
271 rootH1_10044092
272 rootH1_10046070
273 rootH1_10057935
274 rootH1_10059116
275 Ga0055539_1000338
276 Ga0055539_1000616
277 Ga0055533_1000010
278 Ga0055525_1000054
279 Ga0055525_1001286
280 Ga0055535_1000121
281 Ga0055529_1000223
282 Ga0055524_1000417
283 Ga0055531_10000568
284 Ga0055531_10011827
285 Ga0055531_10015791
286 Ga0058860_12180500
287 Ga0065165_1000181
288 Ga0065165_1000193
289 Ga0070690_100026687
290 Ga0070690_100170710
291 Ga0068869_100064868
292 Ga0070682_100009999
293 Ga0070673_100000912
294 Ga0070688_100066386
295 Ga0070688_100117558
296 Ga0070711_100088445
297 Ga0070706_100004433
298 Ga0070693_100000783
299 Ga0068855_100059018
300 Ga0068855_100088345
301 Ga0068855_100213663
302 Ga0068857_100022397
303 Ga0068854_100001635
304 Ga0068856_100000458
305 Ga0068866_10065382
306 Ga0068863_100061904
307 Ga0068860_100095494
308 Ga0070717_10051347
309 Ga0075366_10002454
310 Ga0075366_10015912
311 Ga0075366_10036394
312 Ga0075370_10001314
313 Ga0099823_1003280
314 Ga0105243_10049583
315 Ga0105249_10015010
316 Ga0157319_1000001
317 Ga0157369_10060083
318 Ga0157378_10084680
319 Ga0157378_10089775
320 Ga0157378_10164259
321 Ga0182008_10001236
322 Ga0182006_1000035
323 Ga0182007_10001662
324 Ga0182005_1000025
325 Ga0213872_10000045
326 Ga0213872_10000082
327 Ga0213872_10000183
328 Ga0213872_10000271
329 Ga0213872_10006316
330 Ga0213872_10027248
331 Ga0213872_10036752
332 Ga0209674_100003
333 Ga0209563_100075
334 Ga0209563_100154
335 Ga0207427_100757
336 Ga0209258_100163
337 Ga0209258_100395
338 Ga0209646_1000138
339 Ga0209026_1000021
340 Ga0209677_100093
341 Ga0209677_100484
342 Ga0209677_101457
343 Ga0209759_1000025
344 Ga0209759_1000923
345 Ga0209759_1001069
346 Ga0209455_1000059
347 Ga0209564_1000005
348 Ga0209050_1001838
349 Ga0209050_1001926
350 Ga0209256_1000078
351 Ga0209256_1000630
352 Ga0209051_1000855
353 Ga0209051_1003450
354 Ga0209257_1000103
355 Ga0209257_1000358
356 Ga0209257_1003965
357 Ga0207684_10000633
358 Ga0207695_10054829
359 Ga0207657_10057106
360 Ga0207709_10020450
361 Ga0207670_10058005
362 Ga0207665_10206413
363 Ga0207691_10050991
364 Ga0207689_10004417
365 Ga0207689_10163569
366 Ga0207667_10131636
367 Ga0207651_10021456
368 Ga0207640_10014536
369 Ga0207708_10160031
370 Ga0207702_10000227
371 Ga0207674_10031617
372 Ga0207675_100008499
373 Ga0209389_1001985
374 Ga0268266_10372764
375 Ga0265336_10000051
376 Ga0307517_10068141
377 Ga0307515_10086622
378 Ga0265324_10000683
379 Ga0307511_10062908
380 Ga0265332_10002021
381 Ga0265331_10005028
382 Ga0265327_10000028
383 Ga0307513_10011567
384 Ga0307509_10000039
385 Ga0307509_10054750
386 Ga0307408_100000029
387 Ga0307508_10008138
388 Ga0265314_10027505
389 Ga0307516_10041810
390 Ga0307516_10053556
391 Ga0307405_10119838
392 Ga0307406_10005361
393 Ga0307414_10126509
394 Ga0307411_10000389
395 Ga0307507_10103117
396 Ga0373948_0001967
397 Ga0373934_0004249
398 Ga0373949_0000165
399 Ga0373923_0095401
400 Ga0373936_0000002
401 Ga0373939_0000069
402 Ga0373956_0016133
403 Ga0373960_0006015
404 Ga0373961_0000009
405 Ga0373931_0000202
406 Ga0395899_0002658
407 Ga0395900_0018442
408 Ga0395900_0169567
409 Ga0395898_0084152
410 Ga0395905_0005956
411 Ga0395905_0031038
412 Ga0395901_0007466
413 Ga0400489_41798
414 Ga0436360_0709716
415 Ga0436360_0742391
416 Ga0436361_0248333
417 Ga0436361_0524686
418 Ga0436361_0528490
419 Ga0436361_0656892
420 Ga0436361_0779227
421 Ga0436361_0848343
422 Ga0436361_0989640
423 Ga0436361_1072915
424 Ga0436363_1314638
425 Ga0436362_0991516
426 Ga0439437_002730
427 Ga0450888_004634
428 Ga0450890_001376
429 Ga0450892_000190
430 Ga0450889_000737
431 Ga0439446_0000054
432 Ga0439434_0022718
433 Ga0450893_0004033
434 Ga0466969_0034142
435 Ga0466965_0003464
436 Ga0466966_0007891
437 Ga0466966_0071894
438 Ga0466961_0000131
439 Ga0466961_0010269
440 Ga0466964_0047430
441 Ga0453684_0009095
442 Ga0466971_0004024
443 Ga0466957_0020571
444 Ga0466959_0025743
445 Ga0495639_0016642
446 Ga0495583_0000284
447 Ga0495606_0003049
448 Ga0495622_0021602
449 Ga0495622_0048765
450 Ga0495633_0000180
451 Ga0495625_0160084
452 Ga0495649_0000743
453 Ga0495660_0062148
454 Ga0495672_0000198
455 Ga0495686_0015698
456 Ga0495686_0077564
457 Ga0496115_0242389
458 Ga0496116_0007386
459 Ga0496117_0000045
460 Ga0496118_0000041
461 Ga0496121_0024806
462 Ga0496121_0044659
463 Ga0496121_0085494
464 Ga0496122_0007060
465 Ga0496123_0005400
466 Ga0496124_0016874
467 Ga0501300_000320
468 Ga0501040_0000145
469 Ga0501042_0001408
470 Ga0501042_0033902
471 Ga0501211_000297
472 Ga0501232_002168
473 Ga0501268_014484
474 nmdc:mga0k408_4355_c1
475 nmdc:mga0k408_4361_c1
476 nmdc:mga0k408_9490_c1
477 nmdc:mga07m45_15304_c1
478 Ga0500635_0000077
479 Ga0500578_0018228
480 Ga0500583_0002943
481 Ga0500566_0028397
482 Ga0500640_007243
483 Ga0500554_001011
484 Ga0500572_006609
485 Ga0500595_000145
486 Ga0500614_032337
487 Ga0500559_0002833
488 Ga0500603_000981
489 Ga0500622_0000990
490 Ga0500639_041043
491 Ga0500636_0036934
492 Ga0590071_002263
493 640489428
494 2601669994
495 2643746607
496 2643935538
497 2644221007
498 2644259852
499 2644317321
500 2729145721
501 2739057512
502 2831868538
503 2846038662
504 2857550940
505 2885082646
506 2886850535
507 2919496041
508 2919544319
509 2923527919
510 2932413483
511 2932417543
512 651177454

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01547

SBP_bac_1

Bacterial extracellular solute-binding protein

90

367

0.92

PF13416

SBP_bac_8

Bacterial extracellular solute-binding protein

101

398

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
5hz7-assembly1.cif.gz_A high-resolution crystal structure of the minor dna-binding pilin comp from neisseria meningitidis in fusion with mbp 0.9869 32 398
5hzv-assembly1.cif.gz_A crystal structure of the zona pellucida module of human endoglin/cd105 0.9866 32 397
5tj2-assembly3.cif.gz_C gasdermin-b c-terminal domain containing the polymorphism residues gly299:ser306 fused to maltose binding protein 0.9866 32 396
4b3n-assembly1.cif.gz_A crystal structure of rhesus trim5alpha pry/spry domain 0.9865 32 396
3jyr-assembly1.cif.gz_A crystal structures of the gach receptor of streptomyces glaucescens gla.o in the unliganded form and in complex with acarbose and an acarbose homolog. comparison with acarbose-loaded maltose binding protein of salmonella typhimurium. 0.9864 32 397
ID Description Score Start End Superfamily
af_P0AEX9_30_395_3.40.190.10 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9858 32 395 3.40.190.10
af_P0AEX9_30_395_3.40.190.10 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9751 32 395 3.40.190.10
3g7wA02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9735 138 398 3.40.190.10
3n95B01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9727 32 338 3.40.190.10
2nvuB02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9716 140 395 3.40.190.10
ID Description Score Start End GO Terms
AF-A0A846UIP0-F1-model_v4 Maltodextrin-binding protein 0.987 70 398 GO:0015144
GO:0015768
GO:0042597
GO:0042956
GO:0055052
GO:1901982
AF-A0A736GZQ8-F1-model_v4 Maltodextrin-binding protein 0.9861 32 397 GO:0015144
GO:0015768
GO:0030288
GO:0042956
GO:0055052
GO:1901982
AF-A0A2R7PL91-F1-model_v4 deleted 0.9846 43 397
AF-A0A7S3B622-F1-model_v4 Maltodextrin-binding protein 0.9846 137 277 GO:0015144
GO:0015768
GO:0042956
GO:1901982
AF-A0A0F8H8H8-F1-model_v4 Sugar ABC transporter substrate-binding protein 0.984 174 396 GO:0015144
GO:0015768
GO:0042956
GO:0055052
GO:1901982

Map