F364908

General Info

Members Datasets Scaffolds Average Seq Length
254 192 247 563

Family's Representative Sequence

Representative Sequence 3300025256|Ga0209759_1003309|Ga0209759_10033093
Length 619
Sequence VTIGNARSAKAARQTSCPAAAAGALALPAIALARQPREAGRPGFHHGARSESPLVWPETRPTPAMTPPPSSSLALQRLYHWERSTPDRTVFTQPMGGGLLREFTWKDMMDEARRMAAFLRQQGFEPGARIAILSKNCAWWLMSDFAIWMAGYVSVPLYPTLAAGTITQILQHSESKLLFLGKLDDWEAMRPGVPAGLPCISYPLSPEDVQARVDMRWDDIVGRTAPLTGQPVREGGELATIMYTSGTTGMPKGVMHSFANFAWAIDAGLRRVSLGSDARMLSYLPLAHVAERALVEHGLLASGMHVFFAESLQTFARDLQRARPTMFFSVPRLWVKFQQGVHAKMPPQRLERLLRIPLAGRLLRRKILKALGLEACRYAAGGAAPMPPDLLRWYSSLGLDIIEVYGMTENCGVSHATLAGVRRPGTVGLPYDGVESRLDPATGEIQVRTGCLMLGYYKEPELSAAAFTPDGWMHTGDKGVITGRVKDMFKTSKGKYVAPAPIEDRLVTSPAVEACCVVGANYPQPFALLMLNEDAVARSRDPAGRAALEDAMADHLLTVNHGLDPHEQLEALILMTEPWTVENGLITPTFKVKRNVLETRHAADFDRWTSSKHKIVWAG

Samples

Sample ID Description Type Environment
1 2585428057 Methylibium sp. YR605 Isolate Rhizosphere
2 2585428058 Methylibium sp. CF468 Isolate Rhizosphere
3 2588253510 Rhizobacter sp. OV335 Isolate Rhizosphere
4 2643221592 Rhizobacter sp. Root16D2 Isolate Unclassified
5 2643221625 Rhizobacter sp. Root29 Isolate Unclassified
6 2643221648 Rhizobacter sp. Root1238 Isolate Unclassified
7 2643221654 Rhizobacter sp. Root404 Isolate Unclassified
8 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
9 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
10 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
11 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
12 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
13 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
14 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
15 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
16 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
17 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
18 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
19 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
20 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
21 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
22 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
23 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
24 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
25 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
26 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
27 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
28 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
29 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
30 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
31 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
32 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
33 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
34 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
35 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
36 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
37 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
38 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
39 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
40 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
41 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
42 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
43 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
44 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
45 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
46 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
47 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
48 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
49 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
50 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
51 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
52 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
53 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
55 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
56 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
57 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
58 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
59 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
60 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
61 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
62 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
63 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
64 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
65 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
66 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
67 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
68 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
71 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
73 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
74 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
75 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
77 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
78 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
80 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
81 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
82 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
113 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
114 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
115 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
116 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
117 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
118 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
119 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
120 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
121 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
122 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
123 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
124 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
125 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
126 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
127 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
128 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
129 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
130 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
131 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
132 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
133 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
134 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
135 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
136 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
137 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
138 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
139 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
140 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
141 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
142 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
143 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
144 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
145 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
146 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
147 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
148 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
149 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
150 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
151 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
152 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
153 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
154 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
155 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
156 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
157 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
158 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
159 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
160 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
161 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
162 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
163 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
164 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
165 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
166 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
167 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
168 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
169 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
170 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
171 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
172 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
173 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
174 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
175 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
176 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
177 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
178 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
179 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
180 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
181 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
182 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
183 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
184 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
185 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
186 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
187 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
188 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
189 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
190 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
191 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
192 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.24
Metatranscriptomes 0
Isolates 2.76

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 20.08
Nodule 0
Rhizoplane 0.79
Rhizosphere 64.17
Stem 0
Stem Tuber 0
Unclassified 14.96

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25156J39149_1000266 3300002705 Bacteria 35297
2 JGI25154J39366_1000441 3300002738 Bacteria 22090
3 JGI25157J39369_1000026 3300002741 Bacteria 148982
4 JGI25152J39213_1003240 3300002773 Bacteria 5652
5 JGI25153J46596_10000365 3300003215 Bacteria 31062
6 rootH2_10032708 3300003320 Bacteria 5595
7 rootH1_10059617 3300003323 Bacteria 5210
8 Ga0055539_1000523 3300003752 Bacteria 11735
9 Ga0055539_1001167 3300003752 Bacteria 5364
10 Ga0055533_1000043 3300003756 Bacteria 229262
11 Ga0055525_1000705 3300003759 Bacteria 11982
12 Ga0055535_1000598 3300003761 Bacteria 29746
13 Ga0055529_1000435 3300003763 Bacteria 42039
14 Ga0055526_1009610 3300003771 Bacteria 4626
15 Ga0055540_1006524 3300003792 Bacteria 4610
16 Ga0065165_1003974 3300005262 Bacteria 9686
17 Ga0065707_10092663 3300005295 Bacteria 3737
18 Ga0070658_10058178 3300005327 Bacteria 3145
19 Ga0070690_100071178 3300005330 Bacteria 2259
20 Ga0068869_100008698 3300005334 Bacteria 6558
21 Ga0070666_10001924 3300005335 Bacteria 12627
22 Ga0068868_100072395 3300005338 Bacteria 2750
23 Ga0070660_100069552 3300005339 Bacteria 2745
24 Ga0070668_100030036 3300005347 Bacteria 4130
25 Ga0070669_100056495 3300005353 Bacteria 2878
26 Ga0070675_100004634 3300005354 Bacteria 10501
27 Ga0070671_100005099 3300005355 Bacteria 10461
28 Ga0070671_100010291 3300005355 Bacteria 7504
29 Ga0070671_100033835 3300005355 Bacteria 4229
30 Ga0070674_100020884 3300005356 Bacteria 4193
31 Ga0070674_100119671 3300005356 Bacteria 1948
32 Ga0070673_100107932 3300005364 Bacteria 2303
33 Ga0070688_100013866 3300005365 Bacteria 4558
34 Ga0070667_100009792 3300005367 Bacteria 7947
35 Ga0070667_100104879 3300005367 Bacteria 2446
36 Ga0068867_100005988 3300005459 Bacteria 8622
37 Ga0068867_100022596 3300005459 Bacteria 4496
38 Ga0070672_100017304 3300005543 Bacteria 5185
39 Ga0070672_100035338 3300005543 Bacteria 3799
40 Ga0070665_100010823 3300005548 Bacteria 9227
41 Ga0068855_100056024 3300005563 Bacteria 4627
42 Ga0068854_100006985 3300005578 Bacteria 7201
43 Ga0068856_100002604 3300005614 Bacteria 18562
44 Ga0068856_100009784 3300005614 Bacteria 9316
45 Ga0068852_100140489 3300005616 Bacteria 2234
46 Ga0068859_100003467 3300005617 Bacteria 16040
47 Ga0068864_100000888 3300005618 Bacteria 25176
48 Ga0068864_100120159 3300005618 Bacteria 2349
49 Ga0068863_100002800 3300005841 Bacteria 17281
50 Ga0068863_100032690 3300005841 Bacteria 4958
51 Ga0068858_100000436 3300005842 Bacteria 43518
52 Ga0068858_100090279 3300005842 Bacteria 2851
53 Ga0068862_100003439 3300005844 Bacteria 13622
54 Ga0068862_100094043 3300005844 Bacteria 2614
55 Ga0075362_10004294 3300006177 Bacteria 5097
56 Ga0075367_10008658 3300006178 Bacteria 5278
57 Ga0075366_10070279 3300006195 Bacteria 2085
58 Ga0097621_100009428 3300006237 Bacteria 7082
59 Ga0075370_10012404 3300006353 Bacteria 4502
60 Ga0075370_10014174 3300006353 Bacteria 4247
61 Ga0075370_10026930 3300006353 Bacteria 3187
62 Ga0068865_100003915 3300006881 Bacteria 8933
63 Ga0068865_100027821 3300006881 Bacteria 3738
64 Ga0097620_100003467 3300006931 Bacteria 16040
65 Ga0105243_10048385 3300009148 Bacteria 3352
66 Ga0105248_10002913 3300009177 Bacteria 18997
67 Ga0105237_10004513 3300009545 Bacteria 16080
68 Ga0105238_10070947 3300009551 Bacteria 3482
69 Ga0105249_10042699 3300009553 Bacteria 4125
70 Ga0105246_10031338 3300011119 Bacteria 3518
71 Ga0157374_10023521 3300013296 Bacteria 5512
72 Ga0157374_10163927 3300013296 Bacteria 2166
73 Ga0163162_10001466 3300013306 Bacteria 21940
74 Ga0157375_10084149 3300013308 Bacteria 3229
75 Ga0157379_10116396 3300014968 Bacteria 2404
76 Ga0157376_10135211 3300014969 Bacteria 2205
77 Ga0209674_100067 3300025226 Bacteria 253824
78 Ga0209563_100068 3300025230 Bacteria 254802
79 Ga0207427_100250 3300025231 Bacteria 42521
80 Ga0209258_100129 3300025242 Bacteria 176515
81 Ga0209258_100544 3300025242 Bacteria 34176
82 Ga0207425_1000686 3300025245 Bacteria 18501
83 Ga0209646_1000012 3300025246 Bacteria 573300
84 Ga0209026_1000004 3300025250 Bacteria 949012
85 Ga0209677_100049 3300025253 Bacteria 180721
86 Ga0209677_100079 3300025253 Bacteria 121137
87 Ga0209677_103864 3300025253 Bacteria 4598
88 Ga0209759_1000003 3300025256 Bacteria 792130
89 Ga0209759_1000443 3300025256 Bacteria 48263
90 Ga0209759_1003158 3300025256 Bacteria 6720
91 Ga0209759_1003309 3300025256 Bacteria 6485
92 Ga0209129_1000035 3300025258 Bacteria 329303
93 Ga0209455_1000083 3300025272 Bacteria 255660
94 Ga0209564_1000024 3300025295 Bacteria 535041
95 Ga0209758_1000066 3300025297 Bacteria 298620
96 Ga0209758_1000213 3300025297 Bacteria 126745
97 Ga0209050_1000178 3300025298 Bacteria 145314
98 Ga0207645_10029274 3300025907 Bacteria 3551
99 Ga0207643_10049592 3300025908 Bacteria 2379
100 Ga0207695_10004842 3300025913 Bacteria 18171
101 Ga0207671_10064092 3300025914 Bacteria 2732
102 Ga0207694_10047381 3300025924 Bacteria 3325
103 Ga0207650_10097103 3300025925 Bacteria 2261
104 Ga0207659_10010780 3300025926 Bacteria 5751
105 Ga0207659_10021719 3300025926 Bacteria 4266
106 Ga0207644_10041567 3300025931 Bacteria 3253
107 Ga0207686_10102856 3300025934 Bacteria 1910
108 Ga0207670_10007529 3300025936 Bacteria 6081
109 Ga0207669_10033067 3300025937 Bacteria 2913
110 Ga0207704_10017414 3300025938 Bacteria 3724
111 Ga0207704_10020489 3300025938 Bacteria 3500
112 Ga0207691_10007035 3300025940 Bacteria 10853
113 Ga0207691_10070176 3300025940 Bacteria 3164
114 Ga0207691_10076315 3300025940 Bacteria 3020
115 Ga0207689_10037386 3300025942 Bacteria 4026
116 Ga0207667_10027246 3300025949 Bacteria 6225
117 Ga0207667_10050483 3300025949 Bacteria 4389
118 Ga0207640_10013748 3300025981 Bacteria 4646
119 Ga0207640_10026377 3300025981 Bacteria 3527
120 Ga0207658_10001574 3300025986 Bacteria 17654
121 Ga0207658_10005429 3300025986 Bacteria 8741
122 Ga0207677_10124747 3300026023 Bacteria 1944
123 Ga0207678_10092176 3300026067 Bacteria 2590
124 Ga0207702_10000033 3300026078 Bacteria 166621
125 Ga0207702_10000039 3300026078 Bacteria 152825
126 Ga0207641_10010399 3300026088 Bacteria 7646
127 Ga0207648_10002602 3300026089 Bacteria 19341
128 Ga0207648_10010515 3300026089 Bacteria 8766
129 Ga0207676_10000750 3300026095 Bacteria 25406
130 Ga0207676_10035608 3300026095 Bacteria 3780
131 Ga0207674_10009322 3300026116 Bacteria 11238
132 Ga0207674_10014866 3300026116 Bacteria 8584
133 Ga0207683_10006545 3300026121 Bacteria 9976
134 Ga0207698_10010191 3300026142 Bacteria 6024
135 Ga0209970_1000456 3300027614 Bacteria 6976
136 Ga0268266_10025369 3300028379 Bacteria 5042
137 Ga0268265_10004266 3300028380 Bacteria 9984
138 Ga0268265_10050444 3300028380 Bacteria 3135
139 Ga0268264_10006463 3300028381 Bacteria 9867
140 Ga0265336_10000011 3300028666 Bacteria 275816
141 Ga0307517_10119276 3300028786 Bacteria 1959
142 Ga0307515_10000013 3300028794 Bacteria 568456
143 Ga0307515_10000239 3300028794 Bacteria 135971
144 Ga0307515_10016841 3300028794 Bacteria 13360
145 Ga0307515_10021146 3300028794 Bacteria 11553
146 Ga0307515_10062857 3300028794 Bacteria 5232
147 Ga0307511_10032110 3300030521 Bacteria 4675
148 Ga0307512_10008458 3300030522 Bacteria 10030
149 Ga0265332_10000421 3300031238 Bacteria 30087
150 Ga0265325_10006839 3300031241 Bacteria 6892
151 Ga0307513_10016139 3300031456 Bacteria 9021
152 Ga0307513_10020713 3300031456 Bacteria 7788
153 Ga0307509_10000135 3300031507 Bacteria 109066
154 Ga0307509_10003789 3300031507 Bacteria 22447
155 Ga0307509_10023592 3300031507 Bacteria 6902
156 Ga0307408_100037340 3300031548 Bacteria 3421
157 Ga0307508_10002258 3300031616 Bacteria 20542
158 Ga0307508_10003213 3300031616 Bacteria 16704
159 Ga0307514_10000746 3300031649 Bacteria 55099
160 Ga0316575_10011408 3300031665 Bacteria 3289
161 Ga0316578_10030773 3300031728 Bacteria 3053
162 Ga0307516_10000677 3300031730 Bacteria 46191
163 Ga0307516_10000942 3300031730 Bacteria 40129
164 Ga0307516_10005170 3300031730 Bacteria 15726
165 Ga0307516_10005617 3300031730 Bacteria 14928
166 Ga0307405_10006161 3300031731 Bacteria 5875
167 Ga0307413_10005022 3300031824 Bacteria 5842
168 Ga0307406_10009999 3300031901 Bacteria 5337
169 Ga0307407_10059679 3300031903 Bacteria 2222
170 Ga0307412_10028899 3300031911 Bacteria 3475
171 Ga0307412_10042092 3300031911 Bacteria 2965
172 Ga0307416_100025405 3300032002 Bacteria 4341
173 Ga0307414_10056000 3300032004 Bacteria 2763
174 Ga0307411_10006035 3300032005 Bacteria 6021
175 Ga0316585_10015640 3300032137 Bacteria 2278
176 Ga0316580_10000825 3300032139 Bacteria 7604
177 Ga0307510_10000170 3300033180 Bacteria 55071
178 Ga0307510_10024327 3300033180 Bacteria 7000
179 Ga0307510_10045437 3300033180 Bacteria 4741
180 Ga0373931_0000573 3300035691 Bacteria 15198
181 Ga0316582_0013538 3300036647 Bacteria 4595
182 Ga0316584_0146463 3300036712 Bacteria 1759
183 Ga0373925_0001530 3300037068 Bacteria 19722
184 Ga0395899_0108274 3300037312 Bacteria 2000
185 Ga0395898_0108169 3300037466 Bacteria 2666
186 Ga0395905_0008059 3300037471 Bacteria 10405
187 Ga0436361_1214695 3300039447 Bacteria 7204
188 Ga0439465_0019893 3300041413 Bacteria 2100
189 Ga0451577_0001207 3300042876 Bacteria 36165
190 Ga0451577_0003669 3300042876 Bacteria 16820
191 Ga0451577_0007022 3300042876 Bacteria 11107
192 Ga0451577_0049635 3300042876 Bacteria 3747
193 Ga0466969_0000142 3300044656 Bacteria 38991
194 Ga0466965_0002023 3300044683 Bacteria 8497
195 Ga0466966_0013532 3300044684 Bacteria 5399
196 Ga0466964_0001287 3300044706 Bacteria 8560
197 Ga0453684_0105835 3300044712 Bacteria 3430
198 Ga0453684_0167071 3300044712 Bacteria 2597
199 Ga0466971_0016555 3300044719 Bacteria 3255
200 Ga0466970_0021526 3300044765 Bacteria 3358
201 Ga0466959_0010498 3300045049 Bacteria 6624
202 Ga0466959_0013523 3300045049 Bacteria 5915
203 Ga0451576_0186200 3300045051 Bacteria 2168
204 Ga0466958_0023734 3300045836 Bacteria 3603
205 Ga0495592_0028450 3300046454 Bacteria 4232
206 Ga0495629_0040696 3300046459 Bacteria 3270
207 Ga0495583_0000173 3300046506 Bacteria 109405
208 Ga0495583_0028574 3300046506 Bacteria 2740
209 Ga0495606_0004328 3300046507 Bacteria 14279
210 Ga0495632_0003847 3300046519 Bacteria 10445
211 Ga0495648_0051874 3300046524 Bacteria 2496
212 Ga0495668_0075795 3300046616 Bacteria 1847
213 Ga0495625_0047780 3300046660 Bacteria 3085
214 Ga0495646_0018322 3300046680 Bacteria 4435
215 Ga0495669_0003706 3300046684 Bacteria 6287
216 Ga0495649_0000136 3300046694 Bacteria 64021
217 Ga0495649_0002438 3300046694 Bacteria 13091
218 Ga0495589_0006604 3300046794 Bacteria 6113
219 Ga0495687_000328 3300047443 Bacteria 61170
220 Ga0495687_003100 3300047443 Bacteria 12441
221 Ga0495686_0004538 3300047472 Bacteria 11379
222 Ga0495626_0035304 3300048091 Bacteria 2387
223 Ga0496104_0002996 3300048907 Bacteria 14561
224 Ga0496105_0013374 3300048908 Bacteria 6513
225 Ga0501070_0179629 3300049586 Bacteria 1742
226 Ga0501080_0032410 3300049742 Bacteria 4873
227 Ga0501035_0036836 3300049822 Bacteria 4432
228 nmdc:mga03683_3074_c1 3300050489 Bacteria 5303
229 nmdc:mga0k408_7990_c1 3300050493 Bacteria 5672
230 nmdc:mga07m45_1128_c1 3300050496 Bacteria 11979
231 nmdc:mga07m45_21048_c1 3300050496 Bacteria 3548
232 nmdc:mga07m45_43374_c1 3300050496 Bacteria 2522
233 Ga0500635_0000065 3300053080 Bacteria 69362
234 Ga0500578_0000182 3300053086 Bacteria 75873
235 Ga0500578_0036342 3300053086 Bacteria 3165
236 Ga0500644_0003614 3300053088 Bacteria 3836
237 Ga0500651_0029802 3300053093 Bacteria 3432
238 Ga0500652_000292 3300053131 Bacteria 18350
239 Ga0500658_0006633 3300053134 Bacteria 4288
240 Ga0500559_0000085 3300053136 Bacteria 73850
241 Ga0500559_0003135 3300053136 Bacteria 8214
242 Ga0500568_0037571 3300053139 Bacteria 1964
243 Ga0500622_0000600 3300053156 Bacteria 32731
244 Ga0500622_0002170 3300053156 Bacteria 14539
245 Ga0500636_0010102 3300053177 Bacteria 5501
246 Ga0500645_000801 3300053730 Bacteria 18863
247 Ga0466962_0002547 3300061719 Bacteria 8649

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046506 Ga0495583_0028574 Ga0495583_0028574_22_1473 481
2 3300053134 Ga0500658_0006633 Ga0500658_0006633_41_1573 508
3 3300026142 Ga0207698_10010191 Ga0207698_100101912 514
4 3300003320 rootH2_10032708 rootH2_100327083 539
5 3300044656 Ga0466969_0000142 Ga0466969_0000142_30316_32004 542
6 3300044684 Ga0466966_0013532 Ga0466966_0013532_656_2344 542
7 3300045049 Ga0466959_0010498 Ga0466959_0010498_4748_6436 542
8 3300031911 Ga0307412_10042092 Ga0307412_100420922 544
9 3300031665 Ga0316575_10011408 Ga0316575_100114082 546
10 3300031728 Ga0316578_10030773 Ga0316578_100307733 546
11 3300032137 Ga0316585_10015640 Ga0316585_100156401 546
12 3300032139 Ga0316580_10000825 Ga0316580_100008255 546
13 3300036647 Ga0316582_0013538 Ga0316582_0013538_1039_2724 546
14 3300036712 Ga0316584_0146463 Ga0316584_0146463_10_1695 546
15 3300027614 Ga0209970_1000456 Ga0209970_10004566 549
16 3300049586 Ga0501070_0179629 Ga0501070_0179629_32_1705 550
17 3300049742 Ga0501080_0032410 Ga0501080_0032410_1351_3024 550
18 3300003323 rootH1_10059617 rootH1_100596173 553
19 3300005355 Ga0070671_100033835 Ga0070671_1000338355 554
20 3300005618 Ga0068864_100120159 Ga0068864_1001201591 554
21 3300009177 Ga0105248_10002913 Ga0105248_100029137 554
22 3300009545 Ga0105237_10004513 Ga0105237_100045132 554
23 3300046660 Ga0495625_0047780 Ga0495625_0047780_661_2334 554
24 3300046694 Ga0495649_0002438 Ga0495649_0002438_9912_11627 554
25 3300047443 Ga0495687_000328 Ga0495687_000328_39179_40852 554
26 3300047443 Ga0495687_003100 Ga0495687_003100_4295_6019 554
27 3300048091 Ga0495626_0035304 Ga0495626_0035304_511_2226 554
28 3300050489 nmdc:mga03683_3074_c1 nmdc:mga03683_3074_c1_862_2559 554
29 3300050493 nmdc:mga0k408_7990_c1 nmdc:mga0k408_7990_c1_2987_4684 554
30 3300050496 nmdc:mga07m45_1128_c1 nmdc:mga07m45_1128_c1_9127_10815 554
31 iso_pu_bacteria 2588253510 2588292603 554
32 iso_pu_bacteria 2643221592 2643967182 554
33 iso_pu_bacteria 2643221625 2644140013 554
34 iso_pu_bacteria 2643221648 2644271253 554
35 iso_pu_bacteria 2643221654 2644305478 554
36 3300025256 Ga0209759_1003309 Ga0209759_10033093 555
37 3300042876 Ga0451577_0001207 Ga0451577_0001207_15021_16718 555
38 3300005355 Ga0070671_100005099 Ga0070671_10000509910 556
39 3300005364 Ga0070673_100107932 Ga0070673_1001079321 556
40 3300005548 Ga0070665_100010823 Ga0070665_1000108232 556
41 3300005841 Ga0068863_100032690 Ga0068863_1000326903 556
42 3300013296 Ga0157374_10163927 Ga0157374_101639272 556
43 3300026095 Ga0207676_10035608 Ga0207676_100356083 556
44 3300028794 Ga0307515_10016841 Ga0307515_1001684110 556
45 3300031241 Ga0265325_10006839 Ga0265325_100068393 556
46 3300031730 Ga0307516_10000942 Ga0307516_1000094229 556
47 3300005355 Ga0070671_100010291 Ga0070671_1000102916 557
48 3300005356 Ga0070674_100020884 Ga0070674_1000208843 557
49 3300005356 Ga0070674_100119671 Ga0070674_1001196711 557
50 3300005459 Ga0068867_100022596 Ga0068867_1000225963 557
51 3300005543 Ga0070672_100035338 Ga0070672_1000353382 557
52 3300005616 Ga0068852_100140489 Ga0068852_1001404892 557
53 3300006177 Ga0075362_10004294 Ga0075362_100042943 557
54 3300006178 Ga0075367_10008658 Ga0075367_100086586 557
55 3300006353 Ga0075370_10012404 Ga0075370_100124043 557
56 3300006353 Ga0075370_10014174 Ga0075370_100141742 557
57 3300006353 Ga0075370_10026930 Ga0075370_100269302 557
58 3300006881 Ga0068865_100027821 Ga0068865_1000278212 557
59 3300013308 Ga0157375_10084149 Ga0157375_100841492 557
60 3300025908 Ga0207643_10049592 Ga0207643_100495921 557
61 3300025926 Ga0207659_10021719 Ga0207659_100217192 557
62 3300025931 Ga0207644_10041567 Ga0207644_100415673 557
63 3300025937 Ga0207669_10033067 Ga0207669_100330672 557
64 3300025938 Ga0207704_10017414 Ga0207704_100174143 557
65 3300025940 Ga0207691_10076315 Ga0207691_100763152 557
66 3300025981 Ga0207640_10026377 Ga0207640_100263772 557
67 3300026089 Ga0207648_10010515 Ga0207648_100105156 557
68 3300026116 Ga0207674_10009322 Ga0207674_100093222 557
69 3300028379 Ga0268266_10025369 Ga0268266_100253694 557
70 3300028786 Ga0307517_10119276 Ga0307517_101192761 557
71 3300028794 Ga0307515_10062857 Ga0307515_100628574 557
72 3300030522 Ga0307512_10008458 Ga0307512_100084588 557
73 3300031456 Ga0307513_10020713 Ga0307513_100207134 557
74 3300031507 Ga0307509_10000135 Ga0307509_1000013559 557
75 3300031507 Ga0307509_10003789 Ga0307509_1000378921 557
76 3300031507 Ga0307509_10023592 Ga0307509_100235927 557
77 3300031548 Ga0307408_100037340 Ga0307408_1000373403 557
78 3300031616 Ga0307508_10002258 Ga0307508_1000225811 557
79 3300031616 Ga0307508_10003213 Ga0307508_1000321314 557
80 3300031730 Ga0307516_10000677 Ga0307516_1000067741 557
81 3300031731 Ga0307405_10006161 Ga0307405_100061612 557
82 3300031824 Ga0307413_10005022 Ga0307413_100050223 557
83 3300031901 Ga0307406_10009999 Ga0307406_100099991 557
84 3300031911 Ga0307412_10028899 Ga0307412_100288993 557
85 3300032002 Ga0307416_100025405 Ga0307416_1000254055 557
86 3300032004 Ga0307414_10056000 Ga0307414_100560003 557
87 3300032005 Ga0307411_10006035 Ga0307411_100060355 557
88 3300033180 Ga0307510_10000170 Ga0307510_1000017031 557
89 3300033180 Ga0307510_10024327 Ga0307510_100243274 557
90 3300033180 Ga0307510_10045437 Ga0307510_100454374 557
91 3300046454 Ga0495592_0028450 Ga0495592_0028450_252_1946 557
92 3300046459 Ga0495629_0040696 Ga0495629_0040696_562_2265 557
93 3300046524 Ga0495648_0051874 Ga0495648_0051874_363_2057 557
94 3300046680 Ga0495646_0018322 Ga0495646_0018322_2357_4051 557
95 3300050496 nmdc:mga07m45_21048_c1 nmdc:mga07m45_21048_c1_253_1956 557
96 3300050496 nmdc:mga07m45_43374_c1 nmdc:mga07m45_43374_c1_125_1828 557
97 3300053088 Ga0500644_0003614 Ga0500644_0003614_222_1916 557
98 3300053136 Ga0500559_0000085 Ga0500559_0000085_18956_20650 557
99 3300053139 Ga0500568_0037571 Ga0500568_0037571_115_1809 557
100 3300053156 Ga0500622_0002170 Ga0500622_0002170_4665_6359 557
101 3300053177 Ga0500636_0010102 Ga0500636_0010102_2386_4080 557
102 3300002773 JGI25152J39213_1003240 JGI25152J39213_10032401 558
103 3300003215 JGI25153J46596_10000365 JGI25153J46596_1000036513 558
104 3300003771 Ga0055526_1009610 Ga0055526_10096103 558
105 3300005262 Ga0065165_1003974 Ga0065165_10039744 558
106 3300005295 Ga0065707_10092663 Ga0065707_100926633 558
107 3300005330 Ga0070690_100071178 Ga0070690_1000711782 558
108 3300005334 Ga0068869_100008698 Ga0068869_1000086983 558
109 3300005335 Ga0070666_10001924 Ga0070666_1000192410 558
110 3300005338 Ga0068868_100072395 Ga0068868_1000723952 558
111 3300005347 Ga0070668_100030036 Ga0070668_1000300363 558
112 3300005353 Ga0070669_100056495 Ga0070669_1000564952 558
113 3300005354 Ga0070675_100004634 Ga0070675_10000463410 558
114 3300005365 Ga0070688_100013866 Ga0070688_1000138662 558
115 3300005367 Ga0070667_100009792 Ga0070667_1000097923 558
116 3300005367 Ga0070667_100104879 Ga0070667_1001048791 558
117 3300005459 Ga0068867_100005988 Ga0068867_1000059884 558
118 3300005543 Ga0070672_100017304 Ga0070672_1000173044 558
119 3300005617 Ga0068859_100003467 Ga0068859_1000034673 558
120 3300005618 Ga0068864_100000888 Ga0068864_10000088817 558
121 3300005841 Ga0068863_100002800 Ga0068863_10000280011 558
122 3300005842 Ga0068858_100000436 Ga0068858_10000043615 558
123 3300005842 Ga0068858_100090279 Ga0068858_1000902792 558
124 3300005844 Ga0068862_100003439 Ga0068862_1000034395 558
125 3300005844 Ga0068862_100094043 Ga0068862_1000940432 558
126 3300006237 Ga0097621_100009428 Ga0097621_1000094282 558
127 3300006881 Ga0068865_100003915 Ga0068865_1000039157 558
128 3300006931 Ga0097620_100003467 Ga0097620_1000034673 558
129 3300009148 Ga0105243_10048385 Ga0105243_100483853 558
130 3300009551 Ga0105238_10070947 Ga0105238_100709473 558
131 3300009553 Ga0105249_10042699 Ga0105249_100426991 558
132 3300013296 Ga0157374_10023521 Ga0157374_100235213 558
133 3300013306 Ga0163162_10001466 Ga0163162_1000146615 558
134 3300014968 Ga0157379_10116396 Ga0157379_101163962 558
135 3300014969 Ga0157376_10135211 Ga0157376_101352112 558
136 3300025245 Ga0207425_1000686 Ga0207425_10006864 558
137 3300025258 Ga0209129_1000035 Ga0209129_1000035268 558
138 3300025295 Ga0209564_1000024 Ga0209564_1000024462 558
139 3300025297 Ga0209758_1000066 Ga0209758_100006650 558
140 3300025297 Ga0209758_1000213 Ga0209758_1000213100 558
141 3300025298 Ga0209050_1000178 Ga0209050_100017887 558
142 3300025907 Ga0207645_10029274 Ga0207645_100292742 558
143 3300025925 Ga0207650_10097103 Ga0207650_100971032 558
144 3300025926 Ga0207659_10010780 Ga0207659_100107802 558
145 3300025936 Ga0207670_10007529 Ga0207670_100075293 558
146 3300025938 Ga0207704_10020489 Ga0207704_100204892 558
147 3300025940 Ga0207691_10007035 Ga0207691_100070353 558
148 3300025940 Ga0207691_10070176 Ga0207691_100701762 558
149 3300025942 Ga0207689_10037386 Ga0207689_100373863 558
150 3300025986 Ga0207658_10001574 Ga0207658_100015741 558
151 3300025986 Ga0207658_10005429 Ga0207658_1000542910 558
152 3300026067 Ga0207678_10092176 Ga0207678_100921761 558
153 3300026088 Ga0207641_10010399 Ga0207641_100103993 558
154 3300026089 Ga0207648_10002602 Ga0207648_1000260210 558
155 3300026095 Ga0207676_10000750 Ga0207676_100007504 558
156 3300026121 Ga0207683_10006545 Ga0207683_100065452 558
157 3300028380 Ga0268265_10004266 Ga0268265_100042665 558
158 3300028380 Ga0268265_10050444 Ga0268265_100504442 558
159 3300028381 Ga0268264_10006463 Ga0268264_100064632 558
160 3300028794 Ga0307515_10000013 Ga0307515_10000013414 558
161 3300028794 Ga0307515_10000239 Ga0307515_1000023945 558
162 3300028794 Ga0307515_10021146 Ga0307515_100211465 558
163 3300031456 Ga0307513_10016139 Ga0307513_100161396 558
164 3300031730 Ga0307516_10005170 Ga0307516_100051709 558
165 3300031903 Ga0307407_10059679 Ga0307407_100596791 558
166 3300037068 Ga0373925_0001530 Ga0373925_0001530_765_2453 558
167 3300037312 Ga0395899_0108274 Ga0395899_0108274_222_1913 558
168 3300037466 Ga0395898_0108169 Ga0395898_0108169_171_1862 558
169 3300037471 Ga0395905_0008059 Ga0395905_0008059_4890_6620 558
170 3300041413 Ga0439465_0019893 Ga0439465_0019893_384_2069 558
171 3300042876 Ga0451577_0003669 Ga0451577_0003669_7768_9465 558
172 3300042876 Ga0451577_0007022 Ga0451577_0007022_8717_10414 558
173 3300042876 Ga0451577_0049635 Ga0451577_0049635_1007_2692 558
174 3300044712 Ga0453684_0105835 Ga0453684_0105835_1276_2973 558
175 3300044719 Ga0466971_0016555 Ga0466971_0016555_1357_3090 558
176 3300046519 Ga0495632_0003847 Ga0495632_0003847_8587_10311 558
177 3300047472 Ga0495686_0004538 Ga0495686_0004538_6546_8303 558
178 3300048907 Ga0496104_0002996 Ga0496104_0002996_10527_12227 558
179 3300048908 Ga0496105_0013374 Ga0496105_0013374_40_1740 558
180 3300049822 Ga0501035_0036836 Ga0501035_0036836_2389_4089 558
181 3300053086 Ga0500578_0000182 Ga0500578_0000182_46675_48378 558
182 3300053086 Ga0500578_0036342 Ga0500578_0036342_109_1815 558
183 3300053093 Ga0500651_0029802 Ga0500651_0029802_596_2320 558
184 3300053131 Ga0500652_000292 Ga0500652_000292_14593_16317 558
185 3300053156 Ga0500622_0000600 Ga0500622_0000600_8991_10715 558
186 3300053730 Ga0500645_000801 Ga0500645_000801_16318_18024 558
187 iso_pu_bacteria 2585428057 2587729122 558
188 iso_pu_bacteria 2585428058 2587733696 558
189 3300031238 Ga0265332_10000421 Ga0265332_100004217 559
190 3300045051 Ga0451576_0186200 Ga0451576_0186200_307_1992 559
191 3300005614 Ga0068856_100002604 Ga0068856_1000026048 560
192 3300031649 Ga0307514_10000746 Ga0307514_1000074621 560
193 3300044712 Ga0453684_0167071 Ga0453684_0167071_435_2129 560
194 3300030521 Ga0307511_10032110 Ga0307511_100321101 562
195 3300046506 Ga0495583_0000173 Ga0495583_0000173_105300_106988 562
196 3300046507 Ga0495606_0004328 Ga0495606_0004328_1850_3538 562
197 3300046616 Ga0495668_0075795 Ga0495668_0075795_146_1834 562
198 3300046684 Ga0495669_0003706 Ga0495669_0003706_1838_3526 562
199 3300046694 Ga0495649_0000136 Ga0495649_0000136_60376_62064 562
200 3300046794 Ga0495589_0006604 Ga0495589_0006604_1832_3520 562
201 3300002705 JGI25156J39149_1000266 JGI25156J39149_100026632 563
202 3300002738 JGI25154J39366_1000441 JGI25154J39366_10004413 563
203 3300002741 JGI25157J39369_1000026 JGI25157J39369_1000026130 563
204 3300003752 Ga0055539_1000523 Ga0055539_10005233 563
205 3300003752 Ga0055539_1001167 Ga0055539_10011674 563
206 3300003756 Ga0055533_1000043 Ga0055533_100004341 563
207 3300003759 Ga0055525_1000705 Ga0055525_10007056 563
208 3300003761 Ga0055535_1000598 Ga0055535_10005984 563
209 3300003763 Ga0055529_1000435 Ga0055529_10004357 563
210 3300003792 Ga0055540_1006524 Ga0055540_10065242 563
211 3300005327 Ga0070658_10058178 Ga0070658_100581782 563
212 3300005339 Ga0070660_100069552 Ga0070660_1000695522 563
213 3300005563 Ga0068855_100056024 Ga0068855_1000560243 563
214 3300005578 Ga0068854_100006985 Ga0068854_1000069853 563
215 3300005614 Ga0068856_100009784 Ga0068856_1000097843 563
216 3300006195 Ga0075366_10070279 Ga0075366_100702791 563
217 3300011119 Ga0105246_10031338 Ga0105246_100313382 563
218 3300025226 Ga0209674_100067 Ga0209674_10006741 563
219 3300025230 Ga0209563_100068 Ga0209563_10006841 563
220 3300025231 Ga0207427_100250 Ga0207427_10025034 563
221 3300025242 Ga0209258_100129 Ga0209258_100129118 563
222 3300025242 Ga0209258_100544 Ga0209258_10054424 563
223 3300025246 Ga0209646_1000012 Ga0209646_10000123 563
224 3300025250 Ga0209026_1000004 Ga0209026_1000004613 563
225 3300025253 Ga0209677_100049 Ga0209677_100049120 563
226 3300025253 Ga0209677_100079 Ga0209677_10007951 563
227 3300025253 Ga0209677_103864 Ga0209677_1038643 563
228 3300025256 Ga0209759_1000003 Ga0209759_1000003111 563
229 3300025256 Ga0209759_1000443 Ga0209759_10004438 563
230 3300025256 Ga0209759_1003158 Ga0209759_10031584 563
231 3300025272 Ga0209455_1000083 Ga0209455_100008337 563
232 3300025913 Ga0207695_10004842 Ga0207695_1000484215 563
233 3300025914 Ga0207671_10064092 Ga0207671_100640921 563
234 3300025924 Ga0207694_10047381 Ga0207694_100473812 563
235 3300025934 Ga0207686_10102856 Ga0207686_101028561 563
236 3300025949 Ga0207667_10027246 Ga0207667_100272463 563
237 3300025949 Ga0207667_10050483 Ga0207667_100504833 563
238 3300025981 Ga0207640_10013748 Ga0207640_100137482 563
239 3300026023 Ga0207677_10124747 Ga0207677_101247471 563
240 3300026078 Ga0207702_10000033 Ga0207702_10000033140 563
241 3300026078 Ga0207702_10000039 Ga0207702_100000398 563
242 3300026116 Ga0207674_10014866 Ga0207674_100148666 563
243 3300028666 Ga0265336_10000011 Ga0265336_1000001154 563
244 3300031730 Ga0307516_10005617 Ga0307516_100056174 563
245 3300035691 Ga0373931_0000573 Ga0373931_0000573_6452_8143 563
246 3300039447 Ga0436361_1214695 Ga0436361_1214695_4098_5801 563
247 3300044683 Ga0466965_0002023 Ga0466965_0002023_6454_8145 563
248 3300044706 Ga0466964_0001287 Ga0466964_0001287_5682_7373 563
249 3300044765 Ga0466970_0021526 Ga0466970_0021526_599_2290 563
250 3300045049 Ga0466959_0013523 Ga0466959_0013523_605_2296 563
251 3300045836 Ga0466958_0023734 Ga0466958_0023734_1760_3451 563
252 3300053080 Ga0500635_0000065 Ga0500635_0000065_1441_3132 563
253 3300053136 Ga0500559_0003135 Ga0500559_0003135_1026_2717 563
254 3300061719 Ga0466962_0002547 Ga0466962_0002547_6667_8358 563

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00501

AMP-binding

AMP-binding enzyme

78

457

0.78

PF23562

486

608

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
3wv5-assembly2.cif.gz_B complex structure of vinn with 3-methylaspartate 0.8799 9 417
3wvn-assembly2.cif.gz_B complex structure of vinn with l-aspartate 0.8739 9 417
3wvn-assembly1.cif.gz_A complex structure of vinn with l-aspartate 0.8693 9 427
3wv4-assembly1.cif.gz_A crystal structure of vinn 0.8646 9 427
3wv4-assembly2.cif.gz_B crystal structure of vinn 0.8612 9 424
ID Description Score Start End Superfamily
af_P9WQ53_285_415_2.30.38.10 Mainly Beta;Roll;Luciferase; domain 3;Luciferase; Domain 3 0.9482 299 428 2.30.38.10
af_P9WQ53_285_415_2.30.38.10 Mainly Beta;Roll;Luciferase; domain 3;Luciferase; Domain 3 0.9276 299 428 2.30.38.10
af_Q4D757_69_185_3.40.50.980 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9177 37 114 3.40.50.980
af_A0A0R0JS26_74_160_3.40.50.980 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9095 42 114 3.40.50.980
af_Q55DR6_58_516_3.40.50.12780 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;ANL, N-terminal domain 0.8983 14 425 3.40.50.12780
ID Description Score Start End GO Terms
AF-A0A3M1H9V0-F1-model_v4 AMP-binding acetyl-CoA synthetase 0.9758 4 221 GO:0004467
GO:0016020
AF-A0A3M1H9V0-F1-model_v4 AMP-binding acetyl-CoA synthetase 0.9713 4 221 GO:0004467
GO:0016020
AF-A0A0D6SRE3-F1-model_v4 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) 0.9043 1 522 GO:0004467
GO:0016020
AF-A0A0D6SRE3-F1-model_v4 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) 0.9026 1 522 GO:0004467
GO:0016020
AF-A0A7E4RD61-F1-model_v4 deleted 0.8979 9 419

Feature Viewer

pLDDT pTM Quality
89.16 0.84 High
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Predicted Structure (AlphaFold2)

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