F361094

General Info

Members Datasets Scaffolds Average Seq Length
249 155 498 705

Family's Representative Sequence

Representative Sequence 3300049581|Ga0501047_0040142|Ga0501047_0040142_580_2814
Length 744
Sequence MSFVRESVMVGGRPLTIETGRLAKQAHGSVLITYGESVVLVTAVSQDERPGIDFFPLTCEYVEKTFAAGKIPGGFFKREGRLRDDEILVCRIMDRPLRPLFPDGFKKDTQVIATVLSADKVNPTDVLALTGASAALHISDIPWNGPVVGIRVARIEGEFVANPTFEQQEKSDIDLVVAASKDAIVMVEGGAAEASEADIVEALMFAHREAQPVIGLIEKIRAAVGKPKKEFTAKALPAEVAKRVAELVDGPLESATRVTDKKARYEGYGTLKKKLSETLAAELGAEKWAEVEKLVKAEFEERKAHVVREYVLRDGKRIDGRDTKTIRPITCEVGLLPRVHGSAMFQRGETQAIVATTLGTSSDEQKIDALTGERWKRFLLHYNFPSFSTGEVKPLRGPGRREIGHGALAERALSRMIPESERFPYTIRVVSETLESNGSSSMAAVCGGCLSMMDAGVPIKAPVAGIAMGLITDGQRSAILSDILGDEDHLGDMDFKVCGTAKGITAIQMDIKIEGLSRELLSRALDQAREGRKHILGKMLESLSGPRAELSKYAPRITTLKVKPDQIRIIIGPGGKTIKGIIDQTGVAIDVEDDGTVNVASSDPDAVKKALDIIKGLTAEPEVGAVYEGTVKRIADFGAFVEILPNTDGLVHISEIAHERVERVEDVLKEGDTVQVKVISVDREGKVRLSRRELLPLPEGEEGERARERIQQAREAGPPARGPRRDGPGGGXXXXRDRGPRRPR

Samples

Sample ID Description Type Environment
1 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
2 3300003163 Avena fatua rhizosphere microbial communities - H1_Rhizo_Litter_2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
3 3300003693 Avena fatua rhizosphere microbial communities - H2_Rhizo_Litter_49 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
4 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
5 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
11 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
12 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
13 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
14 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
19 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
20 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
21 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
33 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
34 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
35 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
36 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
40 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
41 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
45 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
46 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
74 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
77 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
78 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
79 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
80 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
81 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
82 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
83 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
84 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
85 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
86 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
87 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
88 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
89 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
90 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
91 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
92 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
93 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
94 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
95 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
96 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
97 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
98 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
99 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
100 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
101 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
102 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
103 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
104 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
105 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
106 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
107 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
108 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
109 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
110 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
111 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
112 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
113 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
114 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
115 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
116 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
117 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
118 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
119 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
120 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
121 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
122 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
123 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
124 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
130 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
131 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
132 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
133 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
134 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
135 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
136 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
137 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
138 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
139 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
140 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
141 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
142 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
144 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
145 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
146 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
147 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
148 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
149 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
150 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
151 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
152 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
153 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
154 2523533628 Maridesulfovibrio zosterae DSM 11974 Isolate Rhizosphere
155 2887630918 Psychrosphaera haliotis UCD-MCMsp1aY Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.99
Metatranscriptomes 1.2
Isolates 0.8

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.42
Nodule 0
Rhizoplane 2.01
Rhizosphere 90.36
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501047_0040142 3300049581 Bacteria 4527
2 Ga0006759J45824_1005818 3300003163 Bacteria 3282
3 Ga0032354_1037931 3300003693 Bacteria 3322
4 Ga0055535_1001818 3300003761 Bacteria 9231
5 Ga0055529_1001089 3300003763 Bacteria 12329
6 Ga0070676_10015994 3300005328 Bacteria 4143
7 Ga0070683_100005373 3300005329 Bacteria 10682
8 Ga0070683_100030656 3300005329 Bacteria 4885
9 Ga0070690_100013134 3300005330 Bacteria 4888
10 Ga0070690_100053098 3300005330 Bacteria 2592
11 Ga0070670_100019393 3300005331 Bacteria 5836
12 Ga0070677_10014597 3300005333 Bacteria 2768
13 Ga0070680_100012238 3300005336 Bacteria 6663
14 Ga0070682_100002382 3300005337 Bacteria 10414
15 Ga0070689_100000001 3300005340 Bacteria 1334580
16 Ga0070689_100027938 3300005340 Bacteria 4259
17 Ga0070668_100001703 3300005347 Bacteria 15951
18 Ga0070668_100004574 3300005347 Bacteria 10254
19 Ga0070669_100004212 3300005353 Bacteria 10404
20 Ga0070675_100124495 3300005354 Bacteria 2192
21 Ga0070673_100001664 3300005364 Bacteria 13164
22 Ga0070688_100056082 3300005365 Bacteria 2473
23 Ga0070714_100066388 3300005435 Bacteria 3109
24 Ga0070708_100006777 3300005445 Bacteria 9125
25 Ga0070678_100046564 3300005456 Bacteria 3110
26 Ga0068867_100026322 3300005459 Bacteria 4176
27 Ga0068867_100043363 3300005459 Bacteria 3294
28 Ga0070698_100000132 3300005471 Bacteria 65416
29 Ga0070679_100013424 3300005530 Bacteria 7844
30 Ga0070679_100058474 3300005530 Bacteria 3841
31 Ga0070684_100036167 3300005535 Bacteria 4231
32 Ga0068853_100008268 3300005539 Bacteria 8352
33 Ga0070672_100000141 3300005543 Bacteria 38703
34 Ga0070672_100063294 3300005543 Bacteria 2921
35 Ga0070672_100063384 3300005543 Bacteria 2919
36 Ga0070686_100019020 3300005544 Bacteria 4041
37 Ga0070665_100009658 3300005548 Bacteria 9757
38 Ga0070665_100111288 3300005548 Bacteria 2741
39 Ga0068855_100000039 3300005563 Bacteria 154012
40 Ga0068856_100031084 3300005614 Bacteria 5222
41 Ga0068856_100101713 3300005614 Bacteria 2867
42 Ga0068851_10000778 3300005834 Bacteria 13727
43 Ga0081455_10005579 3300005937 Bacteria 13766
44 Ga0075364_10001101 3300006051 Bacteria 14440
45 Ga0075366_10007432 3300006195 Bacteria 6054
46 Ga0068865_100045493 3300006881 Bacteria 3009
47 Ga0105240_10003344 3300009093 Bacteria 24974
48 Ga0111539_10005578 3300009094 Bacteria 16274
49 Ga0105245_10000322 3300009098 Bacteria 45183
50 Ga0105245_10014336 3300009098 Bacteria 6906
51 Ga0105247_10008900 3300009101 Bacteria 6117
52 Ga0105241_10036027 3300009174 Bacteria 3723
53 Ga0105237_10014379 3300009545 Bacteria 8281
54 Ga0105237_10100994 3300009545 Bacteria 2877
55 Ga0105238_10001353 3300009551 Bacteria 24621
56 Ga0105238_10004688 3300009551 Bacteria 13524
57 Ga0105239_10016966 3300010375 Bacteria 8049
58 Ga0157374_10138951 3300013296 Bacteria 2357
59 Ga0209258_101309 3300025242 Bacteria 9210
60 Ga0209148_1003904 3300025254 Bacteria 3864
61 Ga0209455_1000264 3300025272 Bacteria 60245
62 Ga0207656_10006542 3300025321 Bacteria 4197
63 Ga0207710_10009963 3300025900 Bacteria 3996
64 Ga0207645_10000305 3300025907 Bacteria 41231
65 Ga0207695_10009104 3300025913 Bacteria 12329
66 Ga0207671_10000048 3300025914 Bacteria 194704
67 Ga0207662_10019275 3300025918 Bacteria 3879
68 Ga0207657_10023379 3300025919 Bacteria 5755
69 Ga0207652_10001829 3300025921 Bacteria 18443
70 Ga0207652_10002336 3300025921 Bacteria 16071
71 Ga0207652_10002566 3300025921 Bacteria 15241
72 Ga0207681_10002283 3300025923 Bacteria 12186
73 Ga0207694_10004364 3300025924 Bacteria 11048
74 Ga0207659_10037735 3300025926 Bacteria 3356
75 Ga0207687_10031329 3300025927 Bacteria 3593
76 Ga0207704_10012476 3300025938 Bacteria 4218
77 Ga0207691_10003213 3300025940 Bacteria 15941
78 Ga0207691_10007791 3300025940 Bacteria 10312
79 Ga0207691_10080464 3300025940 Bacteria 2930
80 Ga0207689_10106005 3300025942 Bacteria 2309
81 Ga0207661_10008879 3300025944 Bacteria 7195
82 Ga0207661_10034469 3300025944 Bacteria 3937
83 Ga0207667_10000085 3300025949 Bacteria 151830
84 Ga0207667_10006585 3300025949 Bacteria 14046
85 Ga0207667_10059593 3300025949 Bacteria 3997
86 Ga0207651_10001032 3300025960 Bacteria 12308
87 Ga0207651_10023766 3300025960 Bacteria 3778
88 Ga0207712_10032956 3300025961 Bacteria 3499
89 Ga0207639_10002761 3300026041 Bacteria 11797
90 Ga0207702_10050762 3300026078 Bacteria 3502
91 Ga0207648_10016198 3300026089 Bacteria 6822
92 Ga0207674_10038450 3300026116 Bacteria 4965
93 Ga0207683_10075642 3300026121 Bacteria 2981
94 Ga0207428_10024066 3300027907 Bacteria 5113
95 Ga0207428_10040144 3300027907 Bacteria 3799
96 Ga0268266_10002287 3300028379 Bacteria 20793
97 Ga0268265_10017106 3300028380 Bacteria 4996
98 Ga0265319_1000063 3300028563 Bacteria 85553
99 Ga0265334_10025288 3300028573 Bacteria 2404
100 Ga0265318_10000161 3300028577 Bacteria 59704
101 Ga0265318_10000294 3300028577 Bacteria 40800
102 Ga0265318_10000347 3300028577 Bacteria 36774
103 Ga0307517_10033128 3300028786 Bacteria 5948
104 Ga0265338_10001115 3300028800 Bacteria 44587
105 Ga0265338_10010543 3300028800 Bacteria 10810
106 Ga0265330_10000111 3300031235 Bacteria 68148
107 Ga0265330_10000139 3300031235 Bacteria 58381
108 Ga0265330_10000523 3300031235 Bacteria 25377
109 Ga0265330_10001232 3300031235 Bacteria 15012
110 Ga0265330_10002157 3300031235 Bacteria 10847
111 Ga0265332_10000040 3300031238 Bacteria 126865
112 Ga0265332_10000221 3300031238 Bacteria 45722
113 Ga0265332_10000920 3300031238 Bacteria 17618
114 Ga0265328_10000280 3300031239 Bacteria 23796
115 Ga0265328_10007224 3300031239 Bacteria 4643
116 Ga0265328_10011902 3300031239 Bacteria 3469
117 Ga0265320_10000022 3300031240 Bacteria 172278
118 Ga0265320_10000196 3300031240 Bacteria 49836
119 Ga0265320_10018229 3300031240 Bacteria 3872
120 Ga0265329_10000384 3300031242 Bacteria 23416
121 Ga0265329_10002112 3300031242 Bacteria 9220
122 Ga0265340_10002502 3300031247 Bacteria 10438
123 Ga0265340_10016301 3300031247 Bacteria 3849
124 Ga0265339_10001735 3300031249 Bacteria 16063
125 Ga0265339_10002839 3300031249 Bacteria 12294
126 Ga0265339_10005127 3300031249 Bacteria 8789
127 Ga0265339_10006248 3300031249 Bacteria 7844
128 Ga0265339_10013520 3300031249 Bacteria 4943
129 Ga0265331_10000001 3300031250 Bacteria 798836
130 Ga0265331_10000720 3300031250 Bacteria 28145
131 Ga0265331_10001289 3300031250 Bacteria 18660
132 Ga0265316_10000042 3300031344 Bacteria 134990
133 Ga0265316_10000133 3300031344 Bacteria 81177
134 Ga0265316_10000925 3300031344 Bacteria 31908
135 Ga0265316_10003011 3300031344 Bacteria 17233
136 Ga0265316_10006948 3300031344 Bacteria 10732
137 Ga0265316_10017276 3300031344 Bacteria 6241
138 Ga0307509_10000012 3300031507 Bacteria 285083
139 Ga0307509_10003294 3300031507 Bacteria 24796
140 Ga0265313_10000189 3300031595 Bacteria 65848
141 Ga0265313_10000241 3300031595 Bacteria 59541
142 Ga0307508_10001013 3300031616 Bacteria 32706
143 Ga0316575_10024657 3300031665 Bacteria 2330
144 Ga0265314_10000001 3300031711 Bacteria 3792860
145 Ga0265314_10000006 3300031711 Bacteria 540431
146 Ga0265314_10000379 3300031711 Bacteria 60808
147 Ga0265314_10010327 3300031711 Bacteria 7798
148 Ga0265314_10039528 3300031711 Bacteria 3396
149 Ga0265342_10000065 3300031712 Bacteria 112156
150 Ga0265342_10000313 3300031712 Bacteria 55198
151 Ga0265342_10001456 3300031712 Bacteria 22042
152 Ga0265342_10004803 3300031712 Bacteria 10486
153 Ga0265342_10030704 3300031712 Bacteria 3327
154 Ga0316576_10000407 3300031727 Bacteria 19819
155 Ga0307516_10003246 3300031730 Bacteria 21096
156 Ga0307516_10017381 3300031730 Bacteria 7501
157 Ga0307516_10038489 3300031730 Bacteria 4773
158 Ga0307406_10026660 3300031901 Bacteria 3473
159 Ga0307415_100006354 3300032126 Bacteria 6362
160 Ga0316593_10013108 3300032168 Bacteria 2448
161 Ga0373950_0000015 3300034818 Bacteria 281101
162 Ga0373950_0000024 3300034818 Bacteria 186458
163 Ga0373936_0000009 3300035113 Bacteria 263478
164 Ga0373956_0013606 3300035119 Bacteria 3387
165 Ga0373955_0047063 3300035172 Bacteria 2334
166 Ga0373961_0000266 3300035241 Bacteria 23790
167 Ga0316574_0026026 3300035398 Bacteria 3517
168 Ga0316574_0029465 3300035398 Bacteria 3316
169 Ga0373933_0000860 3300035724 Bacteria 18635
170 Ga0373933_0004824 3300035724 Bacteria 7368
171 Ga0373937_0006724 3300036401 Bacteria 9919
172 Ga0373937_0039893 3300036401 Bacteria 4279
173 Ga0373925_0021775 3300037068 Bacteria 4673
174 Ga0395899_0032487 3300037312 Bacteria 3920
175 Ga0395901_0033365 3300038443 Bacteria 5314
176 Ga0439439_0001298 3300041406 Bacteria 4895
177 Ga0451577_0003514 3300042876 Bacteria 17371
178 Ga0451577_0005455 3300042876 Bacteria 13029
179 Ga0451577_0012677 3300042876 Bacteria 7910
180 Ga0453684_0000078 3300044712 Bacteria 428794
181 Ga0453684_0094082 3300044712 Bacteria 3688
182 Ga0451576_0000327 3300045051 Bacteria 115197
183 Ga0451576_0031814 3300045051 Bacteria 5623
184 Ga0495583_0004321 3300046506 Bacteria 10256
185 Ga0495630_0028758 3300046517 Bacteria 4130
186 Ga0495634_0004481 3300046642 Bacteria 10958
187 Ga0495674_0001273 3300047319 Bacteria 24490
188 Ga0496100_0054656 3300048903 Bacteria 2605
189 Ga0496104_0018056 3300048907 Bacteria 6432
190 Ga0496108_0016125 3300048911 Bacteria 6091
191 Ga0496114_0000347 3300048917 Bacteria 33826
192 Ga0496114_0001843 3300048917 Bacteria 16049
193 Ga0501034_0000327 3300049571 Bacteria 83596
194 Ga0501034_0019835 3300049571 Bacteria 6870
195 Ga0501036_0081525 3300049572 Bacteria 2734
196 Ga0501037_0004143 3300049573 Bacteria 10520
197 Ga0501043_0000408 3300049579 Bacteria 38659
198 Ga0501043_0015832 3300049579 Bacteria 5911
199 Ga0501046_0000438 3300049580 Bacteria 41879
200 Ga0501046_0015730 3300049580 Bacteria 6349
201 Ga0501047_0000008 3300049581 Bacteria 441758
202 Ga0501047_0000045 3300049581 Bacteria 174068
203 Ga0501047_0001014 3300049581 Bacteria 28345
204 Ga0501047_0003287 3300049581 Bacteria 15310
205 Ga0501067_0000225 3300049583 Bacteria 31399
206 Ga0501067_0048282 3300049583 Bacteria 2360
207 Ga0501068_0000068 3300049584 Bacteria 40630
208 Ga0501069_0001520 3300049585 Bacteria 11480
209 Ga0501069_0012610 3300049585 Bacteria 4495
210 Ga0501070_0000204 3300049586 Bacteria 55876
211 Ga0501070_0002656 3300049586 Bacteria 15599
212 Ga0501072_0000005 3300049588 Bacteria 263381
213 Ga0501072_0000671 3300049588 Bacteria 24721
214 Ga0501072_0014273 3300049588 Bacteria 6087
215 Ga0501073_0000943 3300049589 Bacteria 20932
216 Ga0501073_0008317 3300049589 Bacteria 7694
217 Ga0501073_0010779 3300049589 Bacteria 6694
218 Ga0501073_0020336 3300049589 Bacteria 4789
219 Ga0501074_0000318 3300049590 Bacteria 27840
220 Ga0501074_0014867 3300049590 Bacteria 5660
221 Ga0501075_0084202 3300049591 Bacteria 2408
222 Ga0501076_0034138 3300049592 Bacteria 3974
223 Ga0501077_0010612 3300049593 Bacteria 5737
224 Ga0501077_0013531 3300049593 Bacteria 5118
225 Ga0501079_0000031 3300049741 Bacteria 59419
226 Ga0501079_0005229 3300049741 Bacteria 9647
227 Ga0501080_0007853 3300049742 Bacteria 9653
228 Ga0501080_0008840 3300049742 Bacteria 9157
229 Ga0501080_0035058 3300049742 Bacteria 4685
230 Ga0501083_0004756 3300049744 Bacteria 9591
231 Ga0501083_0036448 3300049744 Bacteria 3355
232 Ga0501035_0006324 3300049822 Bacteria 11131
233 Ga0501044_0171014 3300049823 Bacteria 2144
234 nmdc:mga05p37_167898_c1 3300050507 Bacteria 2677
235 nmdc:mga09592_24346_c1 3300050508 Bacteria 5006
236 nmdc:mga06r32_63696_c1 3300050510 Bacteria 3554
237 nmdc:mga08y16_17676_c1 3300050511 Bacteria 7511
238 nmdc:mga08y16_44814_c1 3300050511 Bacteria 4636
239 Ga0500640_000100 3300053095 Bacteria 15315
240 Ga0500595_000017 3300053119 Bacteria 206032
241 Ga0500614_000416 3300053123 Bacteria 11119
242 Ga0500568_0010801 3300053139 Bacteria 4260
243 Ga0501084_0000002 3300054114 Bacteria 273420
244 Ga0501084_0000169 3300054114 Bacteria 50775
245 Ga0501084_0144057 3300054114 Bacteria 2007
246 Ga0501082_0010271 3300060353 Bacteria 8060
247 Ga0501082_0032910 3300060353 Bacteria 4471
248 2524002463 2523533628 Bacteria 4098242
249 2887631578 2887630918 Bacteria 3239855
250 Ga0501047_0040142
251 Ga0006759J45824_1005818
252 Ga0032354_1037931
253 Ga0055535_1001818
254 Ga0055529_1001089
255 Ga0070676_10015994
256 Ga0070683_100005373
257 Ga0070683_100030656
258 Ga0070690_100013134
259 Ga0070690_100053098
260 Ga0070670_100019393
261 Ga0070677_10014597
262 Ga0070680_100012238
263 Ga0070682_100002382
264 Ga0070689_100000001
265 Ga0070689_100027938
266 Ga0070668_100001703
267 Ga0070668_100004574
268 Ga0070669_100004212
269 Ga0070675_100124495
270 Ga0070673_100001664
271 Ga0070688_100056082
272 Ga0070714_100066388
273 Ga0070708_100006777
274 Ga0070678_100046564
275 Ga0068867_100026322
276 Ga0068867_100043363
277 Ga0070698_100000132
278 Ga0070679_100013424
279 Ga0070679_100058474
280 Ga0070684_100036167
281 Ga0068853_100008268
282 Ga0070672_100000141
283 Ga0070672_100063294
284 Ga0070672_100063384
285 Ga0070686_100019020
286 Ga0070665_100009658
287 Ga0070665_100111288
288 Ga0068855_100000039
289 Ga0068856_100031084
290 Ga0068856_100101713
291 Ga0068851_10000778
292 Ga0081455_10005579
293 Ga0075364_10001101
294 Ga0075366_10007432
295 Ga0068865_100045493
296 Ga0105240_10003344
297 Ga0111539_10005578
298 Ga0105245_10000322
299 Ga0105245_10014336
300 Ga0105247_10008900
301 Ga0105241_10036027
302 Ga0105237_10014379
303 Ga0105237_10100994
304 Ga0105238_10001353
305 Ga0105238_10004688
306 Ga0105239_10016966
307 Ga0157374_10138951
308 Ga0209258_101309
309 Ga0209148_1003904
310 Ga0209455_1000264
311 Ga0207656_10006542
312 Ga0207710_10009963
313 Ga0207645_10000305
314 Ga0207695_10009104
315 Ga0207671_10000048
316 Ga0207662_10019275
317 Ga0207657_10023379
318 Ga0207652_10001829
319 Ga0207652_10002336
320 Ga0207652_10002566
321 Ga0207681_10002283
322 Ga0207694_10004364
323 Ga0207659_10037735
324 Ga0207687_10031329
325 Ga0207704_10012476
326 Ga0207691_10003213
327 Ga0207691_10007791
328 Ga0207691_10080464
329 Ga0207689_10106005
330 Ga0207661_10008879
331 Ga0207661_10034469
332 Ga0207667_10000085
333 Ga0207667_10006585
334 Ga0207667_10059593
335 Ga0207651_10001032
336 Ga0207651_10023766
337 Ga0207712_10032956
338 Ga0207639_10002761
339 Ga0207702_10050762
340 Ga0207648_10016198
341 Ga0207674_10038450
342 Ga0207683_10075642
343 Ga0207428_10024066
344 Ga0207428_10040144
345 Ga0268266_10002287
346 Ga0268265_10017106
347 Ga0265319_1000063
348 Ga0265334_10025288
349 Ga0265318_10000161
350 Ga0265318_10000294
351 Ga0265318_10000347
352 Ga0307517_10033128
353 Ga0265338_10001115
354 Ga0265338_10010543
355 Ga0265330_10000111
356 Ga0265330_10000139
357 Ga0265330_10000523
358 Ga0265330_10001232
359 Ga0265330_10002157
360 Ga0265332_10000040
361 Ga0265332_10000221
362 Ga0265332_10000920
363 Ga0265328_10000280
364 Ga0265328_10007224
365 Ga0265328_10011902
366 Ga0265320_10000022
367 Ga0265320_10000196
368 Ga0265320_10018229
369 Ga0265329_10000384
370 Ga0265329_10002112
371 Ga0265340_10002502
372 Ga0265340_10016301
373 Ga0265339_10001735
374 Ga0265339_10002839
375 Ga0265339_10005127
376 Ga0265339_10006248
377 Ga0265339_10013520
378 Ga0265331_10000001
379 Ga0265331_10000720
380 Ga0265331_10001289
381 Ga0265316_10000042
382 Ga0265316_10000133
383 Ga0265316_10000925
384 Ga0265316_10003011
385 Ga0265316_10006948
386 Ga0265316_10017276
387 Ga0307509_10000012
388 Ga0307509_10003294
389 Ga0265313_10000189
390 Ga0265313_10000241
391 Ga0307508_10001013
392 Ga0316575_10024657
393 Ga0265314_10000001
394 Ga0265314_10000006
395 Ga0265314_10000379
396 Ga0265314_10010327
397 Ga0265314_10039528
398 Ga0265342_10000065
399 Ga0265342_10000313
400 Ga0265342_10001456
401 Ga0265342_10004803
402 Ga0265342_10030704
403 Ga0316576_10000407
404 Ga0307516_10003246
405 Ga0307516_10017381
406 Ga0307516_10038489
407 Ga0307406_10026660
408 Ga0307415_100006354
409 Ga0316593_10013108
410 Ga0373950_0000015
411 Ga0373950_0000024
412 Ga0373936_0000009
413 Ga0373956_0013606
414 Ga0373955_0047063
415 Ga0373961_0000266
416 Ga0316574_0026026
417 Ga0316574_0029465
418 Ga0373933_0000860
419 Ga0373933_0004824
420 Ga0373937_0006724
421 Ga0373937_0039893
422 Ga0373925_0021775
423 Ga0395899_0032487
424 Ga0395901_0033365
425 Ga0439439_0001298
426 Ga0451577_0003514
427 Ga0451577_0005455
428 Ga0451577_0012677
429 Ga0453684_0000078
430 Ga0453684_0094082
431 Ga0451576_0000327
432 Ga0451576_0031814
433 Ga0495583_0004321
434 Ga0495630_0028758
435 Ga0495634_0004481
436 Ga0495674_0001273
437 Ga0496100_0054656
438 Ga0496104_0018056
439 Ga0496108_0016125
440 Ga0496114_0000347
441 Ga0496114_0001843
442 Ga0501034_0000327
443 Ga0501034_0019835
444 Ga0501036_0081525
445 Ga0501037_0004143
446 Ga0501043_0000408
447 Ga0501043_0015832
448 Ga0501046_0000438
449 Ga0501046_0015730
450 Ga0501047_0000008
451 Ga0501047_0000045
452 Ga0501047_0001014
453 Ga0501047_0003287
454 Ga0501067_0000225
455 Ga0501067_0048282
456 Ga0501068_0000068
457 Ga0501069_0001520
458 Ga0501069_0012610
459 Ga0501070_0000204
460 Ga0501070_0002656
461 Ga0501072_0000005
462 Ga0501072_0000671
463 Ga0501072_0014273
464 Ga0501073_0000943
465 Ga0501073_0008317
466 Ga0501073_0010779
467 Ga0501073_0020336
468 Ga0501074_0000318
469 Ga0501074_0014867
470 Ga0501075_0084202
471 Ga0501076_0034138
472 Ga0501077_0010612
473 Ga0501077_0013531
474 Ga0501079_0000031
475 Ga0501079_0005229
476 Ga0501080_0007853
477 Ga0501080_0008840
478 Ga0501080_0035058
479 Ga0501083_0004756
480 Ga0501083_0036448
481 Ga0501035_0006324
482 Ga0501044_0171014
483 nmdc:mga05p37_167898_c1
484 nmdc:mga09592_24346_c1
485 nmdc:mga06r32_63696_c1
486 nmdc:mga08y16_17676_c1
487 nmdc:mga08y16_44814_c1
488 Ga0500640_000100
489 Ga0500595_000017
490 Ga0500614_000416
491 Ga0500568_0010801
492 Ga0501084_0000002
493 Ga0501084_0000169
494 Ga0501084_0144057
495 Ga0501082_0010271
496 Ga0501082_0032910
497 2524002463
498 2887631578

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00575

S1

S1 RNA binding domain

620

692

0.98

PF03725

RNase_PH_C

3' exoribonuclease family, domain 2

145

209

0.97

PF01138

RNase_PH

3' exoribonuclease family, domain 1

11

142

0.96

PF01138

RNase_PH

3' exoribonuclease family, domain 1

325

458

0.95

PF03725

RNase_PH_C

3' exoribonuclease family, domain 2

461

531

0.94

PF00013

KH_1

KH domain

557

616

0.92

PF03726

PNPase

Polyribonucleotide nucleotidyltransferase, RNA binding domain

239

322

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
4nng-assembly1.cif.gz_A structural basis for targeting the ribosomal protein s1 of mycobacterium tuberculosis by pyrazinamide 0.9748 617 690
3gme-assembly1.cif.gz_A-2 crystal structure of polynucleotide phosphorylase in complex with rnase e and manganese 0.9601 1 542
6d6k-assembly2.cif.gz_B structure of polyribonucleotide nucleotidyltransferase from acinetobacter baumannii 0.9585 1 551
4aid-assembly3.cif.gz_C-6 crystal structure of c. crescentus pnpase bound to rnase e recognition peptide 0.9569 1 549
4aid-assembly1.cif.gz_A crystal structure of c. crescentus pnpase bound to rnase e recognition peptide 0.9563 1 549
ID Description Score Start End Superfamily
af_A0A1D6HT49_685_757_3.30.1370.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S8; Chain: A, domain 1;K Homology domain, type 1 0.9963 549 618 3.30.1370.10
af_P05055_621_691_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9855 618 688 2.40.50.140
5xexB03 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2;GHMP Kinase, N-terminal domain 0.9838 322 542 3.30.230.70
af_Q2FZ20_626_698_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9822 619 690 2.40.50.140
5xexB03 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2;GHMP Kinase, N-terminal domain 0.9745 322 542 3.30.230.70
ID Description Score Start End GO Terms
AF-A0A658NT17-F1-model_v4 Polyribonucleotide nucleotidyltransferase 0.9936 440 529 GO:0000175
GO:0003723
GO:0004654
GO:0005829
GO:0006402
AF-A0A527TMC1-F1-model_v4 Polyribonucleotide nucleotidyltransferase 0.9924 406 508 GO:0000175
GO:0003723
GO:0004654
GO:0005829
GO:0006402
AF-A0A5S4TC19-F1-model_v4 Polyribonucleotide nucleotidyltransferase 0.9907 305 524 GO:0000175
GO:0003723
GO:0004654
GO:0005829
GO:0006402
AF-A0A355JTX2-F1-model_v4 deleted 0.9903 335 467
AF-A0A0G0IUC4-F1-model_v4 Polyribonucleotide nucleotidyltransferase 0.9867 290 469 GO:0000175
GO:0003723
GO:0004654
GO:0005829
GO:0006402

Map