F360858

General Info

Members Datasets Scaffolds Average Seq Length
249 172 498 383

Family's Representative Sequence

Representative Sequence 3300031727|Ga0316576_10042961|Ga0316576_100429613
Length 405
Sequence MESTSGSPQPSDHSRSRIAIVAGEASGDNLGAAFMRSVRALHPGARFFGIAGPRMQAEGCECWEPSESLAVMGLFEVLSHLPRLLRLRRSVRERFLAARPDVFIGVDAPEFNLNLAPALHGAGIPTVQYVSPQVWAWRQGRVAKMARFLDLVLCLLPFEKRFYDEHGLAAEFVGHPLADQVPMEVDRDAARRALGLPADGEVVALMPGSRRGEVSRLAADFAGTAAWLAARRPGIRFVAPMANPAARETFAAALAGSAPGVPVDLLDGGAQQAMVAADAVLVASGTATLEALLCKRPMVVAYRLGAATAWMLEHLGLMKAPFFAQPNLLAGRQVVPEIFQAEVTPGRLGEELARWLDHPQECAELARLFTDIHRQLQQGGSDKAASAVLRLVAEKSTAASSRQQP

Samples

Sample ID Description Type Environment
1 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
2 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
3 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
4 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
5 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
14 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
15 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
19 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
20 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
21 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
28 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
29 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
35 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
36 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
37 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
38 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
39 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
40 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
41 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
42 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
43 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
44 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
46 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
49 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
50 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
51 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
52 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
54 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
55 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
57 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
74 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
75 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
78 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
79 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
80 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
81 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
82 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
83 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
84 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
85 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
86 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
87 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
88 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
89 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
90 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
91 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
92 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
93 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
94 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
95 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
96 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
97 3300033527 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
98 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
99 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
100 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
101 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
102 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
103 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
104 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
105 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
106 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
107 3300042003 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821FE14Z081617_5551 Metagenome Rhizosphere
108 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
109 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
110 3300042126 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0218F_E14_070516_87 Metagenome Rhizosphere
111 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
112 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
113 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
114 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
115 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
116 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
117 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
118 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
119 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
120 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
121 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
122 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
123 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
124 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
125 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
126 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
127 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
128 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
129 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
130 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
131 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
132 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
133 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
134 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
135 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
136 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
140 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
141 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
142 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
143 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
144 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
145 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
146 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
147 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
148 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
149 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
150 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
151 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
152 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
153 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
154 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
155 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
156 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
157 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
158 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
159 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
160 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
161 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
162 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
163 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
164 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
165 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
166 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
167 2547132103 Chromobacterium sp. C-61 Isolate Rhizosphere
168 2843690924 Chromobacterium rhizoryzae JP2-74 Isolate Rhizosphere
169 2846033681 Chromobacterium sinusclupearum MWU13-2610 Isolate Rhizosphere
170 2846037992 Chromobacterium alticapitis MWU14-2602 Isolate Rhizosphere
171 2883354860 Hypericibacter adhaerens R5959 Isolate Rhizosphere
172 2998344455 Vogesella urethralis SLBN-145 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.58
Metatranscriptomes 2.01
Isolates 2.41

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.23
Nodule 0
Rhizoplane 2.01
Rhizosphere 89.16
Stem 0
Stem Tuber 0
Unclassified 1.2

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316576_10042961 3300031727 Bacteria 3259
2 JGI25152J39213_1013808 3300002773 Bacteria 1666
3 JGI25151J46595_10011029 3300003187 Bacteria 4172
4 Ga0055535_1001187 3300003761 Bacteria 15037
5 Ga0055529_1000487 3300003763 Bacteria 36884
6 Ga0065707_10085264 3300005295 Bacteria 6307
7 Ga0065707_10088639 3300005295 Bacteria 4597
8 Ga0068869_100027390 3300005334 Bacteria 3973
9 Ga0068869_100051243 3300005334 Bacteria 2995
10 Ga0070668_100002261 3300005347 Bacteria 14179
11 Ga0070669_100134455 3300005353 Bacteria 1901
12 Ga0070713_100079471 3300005436 Bacteria 2794
13 Ga0070701_10000969 3300005438 Bacteria 10382
14 Ga0070711_100008114 3300005439 Bacteria 6417
15 Ga0070711_100113732 3300005439 Bacteria 1991
16 Ga0070705_100067120 3300005440 Bacteria 2154
17 Ga0070700_100029801 3300005441 Bacteria 3256
18 Ga0070700_100063410 3300005441 Bacteria 2338
19 Ga0070694_100020290 3300005444 Bacteria 4235
20 Ga0070662_100002953 3300005457 Bacteria 10566
21 Ga0068867_100194805 3300005459 Bacteria 1619
22 Ga0070672_100004635 3300005543 Bacteria 9003
23 Ga0070686_100003509 3300005544 Bacteria 8601
24 Ga0070695_100030101 3300005545 Bacteria 3378
25 Ga0070696_100000730 3300005546 Bacteria 20979
26 Ga0070696_100063464 3300005546 Bacteria 2587
27 Ga0070665_100013396 3300005548 Bacteria 8251
28 Ga0070664_100007190 3300005564 Bacteria 8975
29 Ga0068857_100085808 3300005577 Bacteria 2814
30 Ga0070702_100012031 3300005615 Bacteria 4322
31 Ga0068859_100011642 3300005617 Bacteria 8841
32 Ga0068864_100122163 3300005618 Bacteria 2330
33 Ga0068861_100003032 3300005719 Bacteria 11095
34 Ga0068861_100009171 3300005719 Bacteria 6823
35 Ga0068861_100009829 3300005719 Bacteria 6616
36 Ga0068861_100012581 3300005719 Bacteria 5904
37 Ga0068861_100268257 3300005719 Bacteria 1465
38 Ga0068870_10010301 3300005840 Bacteria 4289
39 Ga0068863_100062388 3300005841 Bacteria 3525
40 Ga0068863_100070057 3300005841 Bacteria 3316
41 Ga0068858_100089981 3300005842 Bacteria 2856
42 Ga0068860_100100340 3300005843 Bacteria 2762
43 Ga0068860_100193898 3300005843 Bacteria 1966
44 Ga0068862_100002538 3300005844 Bacteria 16147
45 Ga0068862_100011810 3300005844 Bacteria 7213
46 Ga0075366_10031533 3300006195 Bacteria 3120
47 Ga0075370_10019020 3300006353 Bacteria 3732
48 Ga0075428_100003752 3300006844 Bacteria 16652
49 Ga0075428_100006560 3300006844 Bacteria 12938
50 Ga0075428_100015259 3300006844 Bacteria 8521
51 Ga0075428_100513421 3300006844 Bacteria 1282
52 Ga0075430_100011047 3300006846 Bacteria 7651
53 Ga0075430_100097684 3300006846 Bacteria 2454
54 Ga0075430_100113158 3300006846 Bacteria 2262
55 Ga0075431_100000318 3300006847 Bacteria 37976
56 Ga0075431_100005721 3300006847 Bacteria 12288
57 Ga0075431_100155914 3300006847 Bacteria 2349
58 Ga0075433_10000324 3300006852 Bacteria 29260
59 Ga0075434_100012179 3300006871 Bacteria 8148
60 Ga0075429_100001918 3300006880 Bacteria 17254
61 Ga0075429_100046537 3300006880 Bacteria 3775
62 Ga0068865_100133355 3300006881 Bacteria 1863
63 Ga0068865_100295200 3300006881 Bacteria 1295
64 Ga0075436_100200042 3300006914 Bacteria 1415
65 Ga0097620_100011642 3300006931 Bacteria 8841
66 Ga0099795_10000075 3300007788 Bacteria 17387
67 Ga0111539_10002735 3300009094 Bacteria 23404
68 Ga0111539_10010862 3300009094 Bacteria 11460
69 Ga0111539_10012306 3300009094 Bacteria 10722
70 Ga0111539_10040556 3300009094 Bacteria 5603
71 Ga0111539_10128717 3300009094 Bacteria 2965
72 Ga0111539_10139864 3300009094 Bacteria 2835
73 Ga0114129_10020130 3300009147 Bacteria 9495
74 Ga0114129_10032479 3300009147 Bacteria 7378
75 Ga0105249_10075273 3300009553 Bacteria 3126
76 Ga0163163_10049861 3300014325 Bacteria 4121
77 Ga0157380_10014332 3300014326 Bacteria 5798
78 Ga0157380_10044056 3300014326 Bacteria 3495
79 Ga0213872_10000050 3300021361 Bacteria 109093
80 Ga0209258_100060 3300025242 Bacteria 319881
81 Ga0209759_1012587 3300025256 Bacteria 2335
82 Ga0209129_1005099 3300025258 Bacteria 4816
83 Ga0209455_1000093 3300025272 Bacteria 220487
84 Ga0209025_1000435 3300025294 Bacteria 82663
85 Ga0209051_1013410 3300025303 Bacteria 3902
86 Ga0207696_1000470 3300025711 Bacteria 34731
87 Ga0207681_10131647 3300025923 Bacteria 1850
88 Ga0207690_10237700 3300025932 Bacteria 1402
89 Ga0207706_10004055 3300025933 Bacteria 13854
90 Ga0207691_10045183 3300025940 Bacteria 4050
91 Ga0207689_10026119 3300025942 Bacteria 4890
92 Ga0207651_10086846 3300025960 Bacteria 2275
93 Ga0207712_10043404 3300025961 Bacteria 3102
94 Ga0207668_10006950 3300025972 Bacteria 6717
95 Ga0207703_10073660 3300026035 Bacteria 2826
96 Ga0207708_10022338 3300026075 Bacteria 4777
97 Ga0207708_10056379 3300026075 Bacteria 2997
98 Ga0207708_10061538 3300026075 Bacteria 2866
99 Ga0207641_10022905 3300026088 Bacteria 5145
100 Ga0207641_10028334 3300026088 Bacteria 4628
101 Ga0207648_10155422 3300026089 Bacteria 2019
102 Ga0207676_10012338 3300026095 Bacteria 6120
103 Ga0207675_100003162 3300026118 Bacteria 16157
104 Ga0207675_100006059 3300026118 Bacteria 11506
105 Ga0207675_100014755 3300026118 Bacteria 7287
106 Ga0207675_100015636 3300026118 Bacteria 7077
107 Ga0207675_100299328 3300026118 Bacteria 1566
108 Ga0207428_10025171 3300027907 Bacteria 4984
109 Ga0207428_10153084 3300027907 Bacteria 1754
110 Ga0265356_1005210 3300028017 Unclassified 1560
111 Ga0268265_10214948 3300028380 Bacteria 1678
112 Ga0268264_10286340 3300028381 Bacteria 1546
113 Ga0265770_1000102 3300030878 Bacteria 9942
114 Ga0265760_10020789 3300031090 Unclassified 1896
115 Ga0265316_10152119 3300031344 Bacteria 1733
116 Ga0307513_10015817 3300031456 Bacteria 9133
117 Ga0307408_100022155 3300031548 Bacteria 4312
118 Ga0307408_100052056 3300031548 Bacteria 2952
119 Ga0307408_100054629 3300031548 Bacteria 2888
120 Ga0307408_100186964 3300031548 Bacteria 1666
121 Ga0316575_10006575 3300031665 Bacteria 4187
122 Ga0316576_10000600 3300031727 Bacteria 17271
123 Ga0316576_10176128 3300031727 Bacteria 1613
124 Ga0316578_10001938 3300031728 Bacteria 8761
125 Ga0307516_10000209 3300031730 Bacteria 75193
126 Ga0307405_10038184 3300031731 Bacteria 2892
127 Ga0316577_10001281 3300031733 Bacteria 11726
128 Ga0307413_10003647 3300031824 Bacteria 6538
129 Ga0307410_10030453 3300031852 Bacteria 3449
130 Ga0307406_10016892 3300031901 Bacteria 4247
131 Ga0307409_100026450 3300031995 Bacteria 4092
132 Ga0307409_100053158 3300031995 Bacteria 3111
133 Ga0307409_100059658 3300031995 Bacteria 2970
134 Ga0307416_100007285 3300032002 Bacteria 7016
135 Ga0307416_100070281 3300032002 Bacteria 2902
136 Ga0307416_100269040 3300032002 Bacteria 1672
137 Ga0307414_10067037 3300032004 Bacteria 2569
138 Ga0307411_10000427 3300032005 Bacteria 14309
139 Ga0307411_10023668 3300032005 Bacteria 3643
140 Ga0307411_10107694 3300032005 Bacteria 1987
141 Ga0307411_10182980 3300032005 Bacteria 1592
142 Ga0307415_100002688 3300032126 Bacteria 8880
143 Ga0316585_10008885 3300032137 Bacteria 2919
144 Ga0316580_10004449 3300032139 Bacteria 4064
145 Ga0316586_1000020 3300033527 Bacteria 9641
146 Ga0316588_1018017 3300033528 Bacteria 1578
147 Ga0316596_1021054 3300033541 Bacteria 1661
148 Ga0373945_0028848 3300035116 Bacteria 1947
149 Ga0316574_0006128 3300035398 Bacteria 6472
150 Ga0316574_0029940 3300035398 Bacteria 3292
151 Ga0316574_0075462 3300035398 Bacteria 2135
152 Ga0316584_0000204 3300036712 Bacteria 29223
153 Ga0395905_0019962 3300037471 Bacteria 6350
154 Ga0395905_0080008 3300037471 Bacteria 3063
155 Ga0436361_0269507 3300039447 Bacteria 102308
156 Ga0451807_2185105 3300041486 Bacteria 1847
157 Ga0451853_2949222 3300041512 Bacteria 1954
158 Ga0439443_001736 3300042003 Bacteria 2482
159 Ga0450920_004938 3300042122 Bacteria 2358
160 Ga0450923_004967 3300042125 Bacteria 2120
161 Ga0450888_001863 3300042126 Bacteria 2042
162 Ga0450898_002945 3300042134 Bacteria 2404
163 Ga0450898_008385 3300042134 Bacteria 1629
164 Ga0439446_0004519 3300042156 Bacteria 3526
165 Ga0439446_0038386 3300042156 Unclassified 1404
166 Ga0450908_001063 3300042184 Bacteria 5333
167 Ga0439435_0002064 3300042436 Bacteria 3895
168 Ga0466969_0001073 3300044656 Bacteria 14790
169 Ga0466969_0004533 3300044656 Bacteria 7394
170 Ga0466969_0007376 3300044656 Bacteria 5845
171 Ga0466965_0004992 3300044683 Bacteria 5943
172 Ga0466966_0031681 3300044684 Bacteria 3428
173 Ga0466961_0000300 3300044693 Bacteria 32920
174 Ga0466961_0007295 3300044693 Bacteria 7034
175 Ga0466963_0075579 3300044694 Bacteria 2274
176 Ga0466964_0093139 3300044706 Bacteria 1315
177 Ga0466971_0004134 3300044719 Bacteria 6253
178 Ga0466957_0002457 3300044842 Bacteria 9948
179 Ga0466959_0021340 3300045049 Bacteria 4776
180 Ga0466959_0025434 3300045049 Bacteria 4387
181 Ga0466959_0109202 3300045049 Bacteria 1975
182 Ga0451576_0001685 3300045051 Bacteria 36616
183 Ga0451576_0005294 3300045051 Bacteria 16219
184 Ga0466967_0041477 3300045976 Bacteria 3968
185 Ga0495638_0001192 3300046460 Bacteria 24878
186 Ga0495654_0034440 3300046530 Bacteria 2555
187 Ga0495668_0144884 3300046616 Bacteria 1300
188 Ga0495625_0003539 3300046660 Bacteria 15446
189 Ga0495659_0024838 3300046664 Bacteria 2047
190 Ga0495671_0008813 3300046692 Bacteria 5665
191 Ga0496105_0099427 3300048908 Bacteria 2402
192 Ga0496107_0220546 3300048910 Bacteria 1411
193 Ga0496114_0092417 3300048917 Bacteria 2571
194 Ga0496115_0001658 3300048918 Bacteria 16012
195 Ga0501038_0143599 3300049574 Bacteria 1951
196 Ga0501042_0045193 3300049578 Bacteria 3139
197 Ga0501042_0072784 3300049578 Bacteria 2459
198 Ga0501048_0172000 3300049582 Bacteria 1535
199 Ga0501067_0151081 3300049583 Bacteria 1294
200 Ga0501068_0043869 3300049584 Bacteria 2691
201 Ga0501068_0093133 3300049584 Bacteria 1861
202 Ga0501071_0016633 3300049587 Bacteria 5060
203 Ga0501071_0289371 3300049587 Bacteria 1241
204 Ga0501073_0000567 3300049589 Bacteria 26062
205 Ga0501074_0149247 3300049590 Bacteria 1672
206 Ga0501075_0017372 3300049591 Bacteria 5198
207 Ga0501075_0064962 3300049591 Bacteria 2753
208 Ga0501079_0032515 3300049741 Bacteria 4011
209 Ga0501079_0050517 3300049741 Bacteria 3210
210 Ga0501079_0063673 3300049741 Bacteria 2845
211 Ga0501079_0078582 3300049741 Bacteria 2552
212 Ga0501080_0003205 3300049742 Bacteria 14431
213 Ga0501081_0009553 3300049743 Bacteria 6325
214 Ga0501081_0098510 3300049743 Bacteria 2065
215 Ga0501081_0113030 3300049743 Bacteria 1928
216 Ga0501083_0049139 3300049744 Bacteria 2845
217 Ga0501035_0052511 3300049822 Bacteria 3647
218 nmdc:mga0k408_35197_c1 3300050493 Bacteria 2871
219 nmdc:mga07m45_50262_c1 3300050496 Bacteria 2349
220 nmdc:mga05p37_188607_c1 3300050507 Bacteria 2505
221 nmdc:mga05p37_22286_c1 3300050507 Bacteria 7682
222 nmdc:mga09592_3351_c1 3300050508 Bacteria 12959
223 nmdc:mga09592_96673_c1 3300050508 Bacteria 2527
224 nmdc:mga0qj67_17344_c1 3300050509 Bacteria 5473
225 nmdc:mga0qj67_3821_c1 3300050509 Bacteria 10882
226 nmdc:mga0qj67_87440_c1 3300050509 Bacteria 2501
227 nmdc:mga06r32_22643_c1 3300050510 Bacteria 5811
228 nmdc:mga06r32_23_c1 3300050510 Bacteria 93533
229 nmdc:mga06r32_3897_c1 3300050510 Bacteria 13374
230 nmdc:mga08y16_12878_c1 3300050511 Bacteria 8796
231 nmdc:mga08y16_28673_c1 3300050511 Bacteria 5868
232 nmdc:mga08y16_35863_c1 3300050511 Bacteria 5209
233 nmdc:mga0n895_14934_c1 3300050512 Bacteria 7074
234 nmdc:mga0a205_16256_c1 3300050515 Bacteria 6968
235 Ga0495601_0107744 3300053077 Bacteria 1803
236 Ga0500610_0008393 3300053079 Bacteria 4499
237 Ga0500610_0011742 3300053079 Bacteria 4004
238 Ga0500593_000666 3300053117 Bacteria 13069
239 Ga0500627_0003757 3300053158 Bacteria 4761
240 Ga0500634_0004638 3300053161 Bacteria 6395
241 Ga0501084_0109497 3300054114 Bacteria 2321
242 Ga0501082_0057156 3300060353 Bacteria 3361
243 Ga0466962_0007750 3300061719 Bacteria 5145
244 2547373958 2547132103 Bacteria 5115736
245 2843692420 2843690924 Bacteria 5169057
246 2846036264 2846033681 Bacteria 4377894
247 2846041008 2846037992 Bacteria 4526407
248 2883357128 2883354860 Bacteria 5865246
249 2998347212 2998344455 Bacteria 4222996
250 Ga0316576_10042961
251 JGI25152J39213_1013808
252 JGI25151J46595_10011029
253 Ga0055535_1001187
254 Ga0055529_1000487
255 Ga0065707_10085264
256 Ga0065707_10088639
257 Ga0068869_100027390
258 Ga0068869_100051243
259 Ga0070668_100002261
260 Ga0070669_100134455
261 Ga0070713_100079471
262 Ga0070701_10000969
263 Ga0070711_100008114
264 Ga0070711_100113732
265 Ga0070705_100067120
266 Ga0070700_100029801
267 Ga0070700_100063410
268 Ga0070694_100020290
269 Ga0070662_100002953
270 Ga0068867_100194805
271 Ga0070672_100004635
272 Ga0070686_100003509
273 Ga0070695_100030101
274 Ga0070696_100000730
275 Ga0070696_100063464
276 Ga0070665_100013396
277 Ga0070664_100007190
278 Ga0068857_100085808
279 Ga0070702_100012031
280 Ga0068859_100011642
281 Ga0068864_100122163
282 Ga0068861_100003032
283 Ga0068861_100009171
284 Ga0068861_100009829
285 Ga0068861_100012581
286 Ga0068861_100268257
287 Ga0068870_10010301
288 Ga0068863_100062388
289 Ga0068863_100070057
290 Ga0068858_100089981
291 Ga0068860_100100340
292 Ga0068860_100193898
293 Ga0068862_100002538
294 Ga0068862_100011810
295 Ga0075366_10031533
296 Ga0075370_10019020
297 Ga0075428_100003752
298 Ga0075428_100006560
299 Ga0075428_100015259
300 Ga0075428_100513421
301 Ga0075430_100011047
302 Ga0075430_100097684
303 Ga0075430_100113158
304 Ga0075431_100000318
305 Ga0075431_100005721
306 Ga0075431_100155914
307 Ga0075433_10000324
308 Ga0075434_100012179
309 Ga0075429_100001918
310 Ga0075429_100046537
311 Ga0068865_100133355
312 Ga0068865_100295200
313 Ga0075436_100200042
314 Ga0097620_100011642
315 Ga0099795_10000075
316 Ga0111539_10002735
317 Ga0111539_10010862
318 Ga0111539_10012306
319 Ga0111539_10040556
320 Ga0111539_10128717
321 Ga0111539_10139864
322 Ga0114129_10020130
323 Ga0114129_10032479
324 Ga0105249_10075273
325 Ga0163163_10049861
326 Ga0157380_10014332
327 Ga0157380_10044056
328 Ga0213872_10000050
329 Ga0209258_100060
330 Ga0209759_1012587
331 Ga0209129_1005099
332 Ga0209455_1000093
333 Ga0209025_1000435
334 Ga0209051_1013410
335 Ga0207696_1000470
336 Ga0207681_10131647
337 Ga0207690_10237700
338 Ga0207706_10004055
339 Ga0207691_10045183
340 Ga0207689_10026119
341 Ga0207651_10086846
342 Ga0207712_10043404
343 Ga0207668_10006950
344 Ga0207703_10073660
345 Ga0207708_10022338
346 Ga0207708_10056379
347 Ga0207708_10061538
348 Ga0207641_10022905
349 Ga0207641_10028334
350 Ga0207648_10155422
351 Ga0207676_10012338
352 Ga0207675_100003162
353 Ga0207675_100006059
354 Ga0207675_100014755
355 Ga0207675_100015636
356 Ga0207675_100299328
357 Ga0207428_10025171
358 Ga0207428_10153084
359 Ga0265356_1005210
360 Ga0268265_10214948
361 Ga0268264_10286340
362 Ga0265770_1000102
363 Ga0265760_10020789
364 Ga0265316_10152119
365 Ga0307513_10015817
366 Ga0307408_100022155
367 Ga0307408_100052056
368 Ga0307408_100054629
369 Ga0307408_100186964
370 Ga0316575_10006575
371 Ga0316576_10000600
372 Ga0316576_10176128
373 Ga0316578_10001938
374 Ga0307516_10000209
375 Ga0307405_10038184
376 Ga0316577_10001281
377 Ga0307413_10003647
378 Ga0307410_10030453
379 Ga0307406_10016892
380 Ga0307409_100026450
381 Ga0307409_100053158
382 Ga0307409_100059658
383 Ga0307416_100007285
384 Ga0307416_100070281
385 Ga0307416_100269040
386 Ga0307414_10067037
387 Ga0307411_10000427
388 Ga0307411_10023668
389 Ga0307411_10107694
390 Ga0307411_10182980
391 Ga0307415_100002688
392 Ga0316585_10008885
393 Ga0316580_10004449
394 Ga0316586_1000020
395 Ga0316588_1018017
396 Ga0316596_1021054
397 Ga0373945_0028848
398 Ga0316574_0006128
399 Ga0316574_0029940
400 Ga0316574_0075462
401 Ga0316584_0000204
402 Ga0395905_0019962
403 Ga0395905_0080008
404 Ga0436361_0269507
405 Ga0451807_2185105
406 Ga0451853_2949222
407 Ga0439443_001736
408 Ga0450920_004938
409 Ga0450923_004967
410 Ga0450888_001863
411 Ga0450898_002945
412 Ga0450898_008385
413 Ga0439446_0004519
414 Ga0439446_0038386
415 Ga0450908_001063
416 Ga0439435_0002064
417 Ga0466969_0001073
418 Ga0466969_0004533
419 Ga0466969_0007376
420 Ga0466965_0004992
421 Ga0466966_0031681
422 Ga0466961_0000300
423 Ga0466961_0007295
424 Ga0466963_0075579
425 Ga0466964_0093139
426 Ga0466971_0004134
427 Ga0466957_0002457
428 Ga0466959_0021340
429 Ga0466959_0025434
430 Ga0466959_0109202
431 Ga0451576_0001685
432 Ga0451576_0005294
433 Ga0466967_0041477
434 Ga0495638_0001192
435 Ga0495654_0034440
436 Ga0495668_0144884
437 Ga0495625_0003539
438 Ga0495659_0024838
439 Ga0495671_0008813
440 Ga0496105_0099427
441 Ga0496107_0220546
442 Ga0496114_0092417
443 Ga0496115_0001658
444 Ga0501038_0143599
445 Ga0501042_0045193
446 Ga0501042_0072784
447 Ga0501048_0172000
448 Ga0501067_0151081
449 Ga0501068_0043869
450 Ga0501068_0093133
451 Ga0501071_0016633
452 Ga0501071_0289371
453 Ga0501073_0000567
454 Ga0501074_0149247
455 Ga0501075_0017372
456 Ga0501075_0064962
457 Ga0501079_0032515
458 Ga0501079_0050517
459 Ga0501079_0063673
460 Ga0501079_0078582
461 Ga0501080_0003205
462 Ga0501081_0009553
463 Ga0501081_0098510
464 Ga0501081_0113030
465 Ga0501083_0049139
466 Ga0501035_0052511
467 nmdc:mga0k408_35197_c1
468 nmdc:mga07m45_50262_c1
469 nmdc:mga05p37_188607_c1
470 nmdc:mga05p37_22286_c1
471 nmdc:mga09592_3351_c1
472 nmdc:mga09592_96673_c1
473 nmdc:mga0qj67_17344_c1
474 nmdc:mga0qj67_3821_c1
475 nmdc:mga0qj67_87440_c1
476 nmdc:mga06r32_22643_c1
477 nmdc:mga06r32_23_c1
478 nmdc:mga06r32_3897_c1
479 nmdc:mga08y16_12878_c1
480 nmdc:mga08y16_28673_c1
481 nmdc:mga08y16_35863_c1
482 nmdc:mga0n895_14934_c1
483 nmdc:mga0a205_16256_c1
484 Ga0495601_0107744
485 Ga0500610_0008393
486 Ga0500610_0011742
487 Ga0500593_000666
488 Ga0500627_0003757
489 Ga0500634_0004638
490 Ga0501084_0109497
491 Ga0501082_0057156
492 Ga0466962_0007750
493 2547373958
494 2843692420
495 2846036264
496 2846041008
497 2883357128
498 2998347212

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02684

LpxB

Lipid-A-disaccharide synthetase

18

392

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
1lu4-assembly1.cif.gz_A 1.1 angstrom resolution crystal structure of a secreted mycobacterium tuberculosis disulfide oxidoreductase homologous to e. coli dsbe: implications for functions 0.7113 196 244
4fkz-assembly1.cif.gz_B crystal structure of bacillus subtilis udp-glcnac 2-epimerase in complex with udp-glcnac and udp 0.6977 6 341
7vz6-assembly1.cif.gz_E the crystal structure of non-hydrolyzing udpglcnac 2-epimerase in complex with udp-glucose 0.6975 4 365
5enz-assembly1.cif.gz_A s. aureus mnaa-udp co-structure 0.6931 7 357
7vz6-assembly1.cif.gz_G the crystal structure of non-hydrolyzing udpglcnac 2-epimerase in complex with udp-glucose 0.693 4 365
ID Description Score Start End Superfamily
af_P10441_9_377_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.8687 10 362 3.40.50.2000
af_F4IF99_42_436_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.8318 10 351 3.40.50.2000
af_F4IF99_42_436_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.7742 10 351 3.40.50.2000
af_Q2G0L2_318_480_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.7718 175 350 3.40.50.2000
af_K7KRG7_210_378_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.7709 175 344 3.40.50.2000
ID Description Score Start End GO Terms
AF-A0A3S0DH78-F1-model_v4 Lipid-A-disaccharide synthase (EC 2.4.1.182) 0.9862 245 368 GO:0005543
GO:0008915
GO:0009245
GO:0016020
AF-A0A7C3L9T1-F1-model_v4 Lipid-A-disaccharide synthase (EC 2.4.1.182) 0.975 254 369 GO:0005543
GO:0008915
GO:0009245
GO:0016020
AF-A0A7V5XEB0-F1-model_v4 Lipid-A-disaccharide synthase (EC 2.4.1.182) 0.9691 7 124 GO:0005543
GO:0008915
GO:0009245
GO:0016020
AF-A0A2R7S3E9-F1-model_v4 Lipid-A-disaccharide synthase (EC 2.4.1.182) 0.9686 164 369 GO:0005543
GO:0008915
GO:0009245
GO:0016020
AF-A0A7C3L9T1-F1-model_v4 Lipid-A-disaccharide synthase (EC 2.4.1.182) 0.9668 254 369 GO:0005543
GO:0008915
GO:0009245
GO:0016020

Map