F355114

General Info

Members Datasets Scaffolds Average Seq Length
242 162 484 345

Family's Representative Sequence

Representative Sequence 3300053090|Ga0500646_0001501|Ga0500646_0001501_1356_2447
Length 363
Sequence MSQGPASSTGAPATGSATSQADASGDALVSVRGVSKHFPTRVAWPARTGLAPHVRLWRAIARMPATVQAMTDIDLEIKRGETLGLVGESGCGKSTLGRTILRLYEPTAGRIVFDTTELTRLSQRDLRPLRRHMQMIFQDPYASLNPRMTVGTAVAEPLVIHGLASSAGQRTQRVAELLTRVGLRADAARRYPHELSGGQRQRVGIARALACQPQFVVCDEPISALDVSIQAQIVNLLEDLQAAEQLTYLFISHDLKVVQHISDRVAVMYLGRIVELAESGTLYRTPKHPYTQALLSAVPRIDPAARTGRILLTGDVPSPIAPPPGCAFHPRCPVKDKPAACFREIPRLRVLQNGARAACHVAE

Samples

Sample ID Description Type Environment
1 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
22 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
30 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
31 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
34 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
35 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
36 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
37 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
38 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
39 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
40 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
41 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
42 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
43 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
44 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
45 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
51 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
52 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
55 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
56 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
57 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
58 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
87 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
89 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
90 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
91 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
92 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
93 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
94 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
95 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
96 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
97 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
98 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
99 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
100 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
101 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
102 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
103 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
104 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
105 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
106 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
107 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
108 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
109 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
110 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
111 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
112 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
113 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
114 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
115 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
116 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
117 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
118 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
119 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
120 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
121 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
122 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
123 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
124 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
125 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
126 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
127 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
128 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
129 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
130 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
131 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
132 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
133 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
134 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
135 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
138 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
139 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
140 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
141 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
142 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
143 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
144 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
145 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
146 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
147 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
148 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
149 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
150 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
151 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
152 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
153 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
154 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
155 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
156 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
157 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
158 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
159 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
160 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
161 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
162 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.59
Metatranscriptomes 0.41
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.79
Nodule 0
Rhizoplane 10.74
Rhizosphere 81.82
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500646_0001501 3300053090 Bacteria 6139
2 SwRhRL2b_contig_2349148 2162886007 Bacteria 88345
3 Ga0065704_10070132 3300005289 Bacteria 1955461
4 Ga0065707_10193242 3300005295 Bacteria 1349
5 Ga0070658_10243092 3300005327 Bacteria 1526
6 Ga0070683_100051054 3300005329 Bacteria 3829
7 Ga0070690_100028426 3300005330 Bacteria 3463
8 Ga0070680_100026349 3300005336 Bacteria 4650
9 Ga0070660_100004212 3300005339 Bacteria 9927
10 Ga0070661_100026121 3300005344 Bacteria 4197
11 Ga0070675_100016276 3300005354 Bacteria 5898
12 Ga0070674_100040935 3300005356 Bacteria 3137
13 Ga0070673_100163767 3300005364 Bacteria 1893
14 Ga0070659_100222434 3300005366 Bacteria 1558
15 Ga0070714_100021078 3300005435 Bacteria 5328
16 Ga0070714_100047894 3300005435 Bacteria 3633
17 Ga0070714_100078030 3300005435 Bacteria 2878
18 Ga0070714_100266433 3300005435 Bacteria 1588
19 Ga0070713_100008922 3300005436 Bacteria 7143
20 Ga0070705_100043969 3300005440 Bacteria 2563
21 Ga0070708_100293506 3300005445 Bacteria 1531
22 Ga0070678_100001427 3300005456 Bacteria 12731
23 Ga0070681_10025754 3300005458 Bacteria 5914
24 Ga0070681_10104728 3300005458 Bacteria 2771
25 Ga0070681_10104933 3300005458 Bacteria 2768
26 Ga0070681_10181116 3300005458 Bacteria 2028
27 Ga0070706_100028219 3300005467 Bacteria 5166
28 Ga0070707_100014359 3300005468 Bacteria 7423
29 Ga0070698_100010152 3300005471 Bacteria 10060
30 Ga0070699_100002087 3300005518 Bacteria 18081
31 Ga0070699_100004014 3300005518 Bacteria 13007
32 Ga0070679_100004535 3300005530 Bacteria 12827
33 Ga0070684_100006343 3300005535 Bacteria 9137
34 Ga0070684_100141526 3300005535 Bacteria 2175
35 Ga0070665_100011035 3300005548 Bacteria 9131
36 Ga0068855_100160927 3300005563 Bacteria 2548
37 Ga0068857_100132535 3300005577 Bacteria 2248
38 Ga0068856_100011612 3300005614 Bacteria 8544
39 Ga0068852_100022960 3300005616 Bacteria 5012
40 Ga0068863_100403102 3300005841 Bacteria 1338
41 Ga0081455_10000151 3300005937 Bacteria 83439
42 Ga0070717_10098363 3300006028 Bacteria 2480
43 Ga0070717_10208620 3300006028 Bacteria 1714
44 Ga0075364_10094065 3300006051 Bacteria 1991
45 Ga0070716_100036408 3300006173 Bacteria 2713
46 Ga0070712_100003351 3300006175 Bacteria 9841
47 Ga0075428_100679045 3300006844 Bacteria 1098
48 Ga0075430_100009251 3300006846 Bacteria 8329
49 Ga0075431_100085478 3300006847 Bacteria 3256
50 Ga0075431_100174413 3300006847 Bacteria 2209
51 Ga0075431_100602299 3300006847 Bacteria 1083
52 Ga0075433_10010124 3300006852 Bacteria 7559
53 Ga0075433_10172694 3300006852 Bacteria 1923
54 Ga0075434_100015156 3300006871 Bacteria 7384
55 Ga0075429_100015236 3300006880 Bacteria 6664
56 Ga0075429_100203951 3300006880 Bacteria 1733
57 Ga0075436_100018450 3300006914 Bacteria 4777
58 Ga0075436_100140872 3300006914 Bacteria 1695
59 Ga0075435_100003159 3300007076 Bacteria 11141
60 Ga0075435_100032747 3300007076 Bacteria 4106
61 Ga0105240_10181429 3300009093 Bacteria 2484
62 Ga0111539_10013355 3300009094 Bacteria 10263
63 Ga0111539_10045964 3300009094 Bacteria 5225
64 Ga0111539_10689305 3300009094 Bacteria 1189
65 Ga0105245_10000168 3300009098 Bacteria 62053
66 Ga0114129_10011990 3300009147 Bacteria 12330
67 Ga0114129_10175334 3300009147 Bacteria 2920
68 Ga0157373_10094913 3300013100 Bacteria 2099
69 Ga0157370_10014991 3300013104 Bacteria 7902
70 Ga0157369_10010046 3300013105 Bacteria 10808
71 Ga0157375_10070714 3300013308 Bacteria 3500
72 Ga0182008_10006990 3300014497 Bacteria 6261
73 Ga0157376_10341936 3300014969 Bacteria 1429
74 Ga0182007_10056654 3300015262 Bacteria 1287
75 Ga0206353_10775805 3300020082 Bacteria 1335
76 Ga0207685_10033462 3300025905 Bacteria 1858
77 Ga0207699_10168326 3300025906 Bacteria 1464
78 Ga0207705_10196102 3300025909 Bacteria 1529
79 Ga0207684_10065602 3300025910 Bacteria 3083
80 Ga0207707_10006008 3300025912 Bacteria 10625
81 Ga0207707_10062536 3300025912 Bacteria 3239
82 Ga0207695_10376901 3300025913 Bacteria 1305
83 Ga0207671_10126299 3300025914 Bacteria 1960
84 Ga0207693_10002287 3300025915 Bacteria 16663
85 Ga0207660_10083316 3300025917 Bacteria 2355
86 Ga0207657_10000986 3300025919 Bacteria 30204
87 Ga0207657_10006140 3300025919 Bacteria 12487
88 Ga0207657_10026952 3300025919 Bacteria 5270
89 Ga0207657_10121505 3300025919 Bacteria 2149
90 Ga0207649_10051600 3300025920 Bacteria 2548
91 Ga0207649_10211351 3300025920 Bacteria 1376
92 Ga0207652_10009276 3300025921 Bacteria 7912
93 Ga0207652_10035060 3300025921 Bacteria 4233
94 Ga0207652_10121309 3300025921 Bacteria 2326
95 Ga0207646_10116961 3300025922 Bacteria 2395
96 Ga0207646_10345515 3300025922 Bacteria 1344
97 Ga0207659_10066720 3300025926 Bacteria 2612
98 Ga0207687_10000338 3300025927 Bacteria 31377
99 Ga0207700_10000028 3300025928 Bacteria 135555
100 Ga0207700_10056839 3300025928 Bacteria 2947
101 Ga0207664_10021283 3300025929 Bacteria 4819
102 Ga0207664_10038387 3300025929 Bacteria 3713
103 Ga0207664_10066990 3300025929 Bacteria 2880
104 Ga0207690_10147134 3300025932 Bacteria 1743
105 Ga0207709_10114856 3300025935 Bacteria 1807
106 Ga0207709_10430765 3300025935 Bacteria 1015
107 Ga0207670_10091395 3300025936 Bacteria 2153
108 Ga0207669_10114339 3300025937 Bacteria 1817
109 Ga0207661_10167594 3300025944 Bacteria 1910
110 Ga0207661_10221417 3300025944 Bacteria 1673
111 Ga0207667_10140274 3300025949 Bacteria 2489
112 Ga0207667_10290732 3300025949 Bacteria 1670
113 Ga0207712_10150498 3300025961 Bacteria 1797
114 Ga0207677_10008588 3300026023 Bacteria 5716
115 Ga0207702_10008698 3300026078 Bacteria 8562
116 Ga0207674_10060180 3300026116 Bacteria 3841
117 Ga0207674_10061190 3300026116 Bacteria 3805
118 Ga0207683_10001081 3300026121 Bacteria 24825
119 Ga0207428_10048399 3300027907 Bacteria 3411
120 Ga0207428_10085298 3300027907 Bacteria 2460
121 Ga0268266_10115963 3300028379 Bacteria 2378
122 Ga0307517_10033414 3300028786 Bacteria 5908
123 Ga0307515_10013471 3300028794 Bacteria 15278
124 Ga0307509_10000116 3300031507 Bacteria 116150
125 Ga0265314_10097385 3300031711 Bacteria 1900
126 Ga0307516_10019191 3300031730 Bacteria 7086
127 Ga0373940_0014439 3300035088 Bacteria 1927
128 Ga0373952_0006873 3300035092 Bacteria 2118
129 Ga0373932_0021268 3300035112 Bacteria 1711
130 Ga0373936_0000027 3300035113 Bacteria 119134
131 Ga0373956_0084736 3300035119 Bacteria 1457
132 Ga0373961_0000216 3300035241 Bacteria 27259
133 Ga0373962_0006955 3300035242 Bacteria 2757
134 Ga0373931_0030263 3300035691 Bacteria 2786
135 Ga0373937_0231920 3300036401 Bacteria 1739
136 Ga0373937_0425234 3300036401 Bacteria 1261
137 Ga0373937_0440361 3300036401 Bacteria 1237
138 Ga0395900_0018844 3300037418 Bacteria 7039
139 Ga0395900_0022850 3300037418 Bacteria 6398
140 Ga0395898_0026906 3300037466 Bacteria 5779
141 Ga0395898_0197262 3300037466 Bacteria 1923
142 Ga0395905_0000319 3300037471 Bacteria 69398
143 Ga0395905_0010261 3300037471 Bacteria 9122
144 Ga0395905_0011430 3300037471 Bacteria 8578
145 Ga0395901_0029902 3300038443 Bacteria 5611
146 Ga0395901_0134045 3300038443 Bacteria 2603
147 Ga0395901_0165750 3300038443 Bacteria 2320
148 Ga0395901_0168522 3300038443 Bacteria 2298
149 Ga0395901_0285156 3300038443 Bacteria 1715
150 Ga0395901_0355845 3300038443 Bacteria 1511
151 Ga0439453_0017539 3300041408 Bacteria 1258
152 Ga0451577_0142265 3300042876 Bacteria 2156
153 Ga0466963_0019259 3300044694 Bacteria 4277
154 Ga0466963_0021691 3300044694 Bacteria 4055
155 Ga0466963_0051018 3300044694 Bacteria 2741
156 Ga0466964_0005034 3300044706 Bacteria 4887
157 Ga0466964_0023760 3300044706 Bacteria 2384
158 Ga0453684_0012051 3300044712 Bacteria 14366
159 Ga0466971_0063574 3300044719 Bacteria 1671
160 Ga0466957_0086304 3300044842 Bacteria 1961
161 Ga0466958_0016898 3300045836 Bacteria 4210
162 Ga0466958_0021098 3300045836 Bacteria 3803
163 Ga0466967_0015746 3300045976 Bacteria 5939
164 Ga0466967_0033666 3300045976 Bacteria 4340
165 Ga0466967_0047742 3300045976 Bacteria 3734
166 Ga0466967_0057810 3300045976 Bacteria 3425
167 Ga0466967_0081349 3300045976 Bacteria 2925
168 Ga0466967_0086320 3300045976 Bacteria 2843
169 Ga0466967_0285112 3300045976 Bacteria 1585
170 Ga0495653_0223944 3300046463 Bacteria 1263
171 Ga0495584_0070389 3300046491 Bacteria 1758
172 Ga0495628_0173128 3300046516 Bacteria 1636
173 Ga0495640_0096662 3300046533 Bacteria 1943
174 Ga0495634_0066807 3300046642 Bacteria 2380
175 Ga0495680_0086722 3300047322 Bacteria 2355
176 Ga0495593_0034146 3300047673 Bacteria 2768
177 Ga0496100_0036779 3300048903 Bacteria 3091
178 Ga0496100_0227647 3300048903 Bacteria 1370
179 Ga0496101_0013238 3300048904 Bacteria 5524
180 Ga0496101_0021601 3300048904 Bacteria 4423
181 Ga0496102_0004934 3300048905 Bacteria 11307
182 Ga0496102_0058202 3300048905 Bacteria 3531
183 Ga0496102_0192388 3300048905 Bacteria 1922
184 Ga0496104_0209331 3300048907 Bacteria 1862
185 Ga0496104_0565661 3300048907 Bacteria 1047
186 Ga0496106_0152323 3300048909 Bacteria 1824
187 Ga0496107_0028380 3300048910 Bacteria 3976
188 Ga0496108_0040374 3300048911 Bacteria 3890
189 Ga0496108_0270790 3300048911 Bacteria 1478
190 Ga0496110_0002662 3300048913 Bacteria 13483
191 Ga0496110_0073197 3300048913 Bacteria 3041
192 Ga0496110_0236738 3300048913 Bacteria 1661
193 Ga0496111_0125303 3300048914 Bacteria 1898
194 Ga0496112_0008411 3300048915 Bacteria 9240
195 Ga0496112_0054354 3300048915 Bacteria 3934
196 Ga0496112_0100320 3300048915 Bacteria 2865
197 Ga0496113_0088667 3300048916 Bacteria 2380
198 Ga0496114_0129278 3300048917 Bacteria 2179
199 Ga0496114_0147637 3300048917 Bacteria 2039
200 Ga0496115_0008812 3300048918 Bacteria 7474
201 Ga0496115_0009680 3300048918 Bacteria 7172
202 Ga0496115_0063666 3300048918 Bacteria 2975
203 Ga0501034_0000209 3300049571 Bacteria 111455
204 Ga0501036_0145675 3300049572 Bacteria 1998
205 Ga0501069_0015119 3300049585 Bacteria 4135
206 Ga0501077_0037534 3300049593 Bacteria 3085
207 nmdc:mga05p37_162289_c1 3300050507 Bacteria 2729
208 nmdc:mga05p37_262174_c1 3300050507 Bacteria 2068
209 nmdc:mga05p37_296723_c1 3300050507 Bacteria 1922
210 nmdc:mga05p37_324622_c1 3300050507 Bacteria 1821
211 nmdc:mga09592_10382_c1 3300050508 Bacteria 7579
212 nmdc:mga09592_212480_c1 3300050508 Bacteria 1676
213 nmdc:mga09592_224445_c1 3300050508 Bacteria 1628
214 nmdc:mga0qj67_149013_c1 3300050509 Bacteria 1898
215 nmdc:mga06r32_127387_c1 3300050510 Bacteria 2516
216 nmdc:mga06r32_225810_c1 3300050510 Bacteria 1861
217 nmdc:mga06r32_516722_c1 3300050510 Bacteria 1170
218 nmdc:mga08y16_18815_c1 3300050511 Bacteria 7277
219 nmdc:mga08y16_280270_c1 3300050511 Bacteria 1720
220 nmdc:mga08y16_45538_c1 3300050511 Bacteria 4596
221 nmdc:mga0n895_17323_c1 3300050512 Bacteria 6639
222 nmdc:mga0n895_191408_c1 3300050512 Bacteria 2077
223 nmdc:mga0rr50_19582_c1 3300050513 Bacteria 4573
224 nmdc:mga0rr50_38318_c1 3300050513 Bacteria 3468
225 nmdc:mga08x19_111696_c1 3300050514 Bacteria 1824
226 nmdc:mga0a205_17077_c1 3300050515 Bacteria 6795
227 Ga0495601_0058353 3300053077 Bacteria 2445
228 Ga0500583_0108370 3300053092 Bacteria 1366
229 Ga0500566_0053331 3300053094 Bacteria 2308
230 Ga0500640_003157 3300053095 Bacteria 5669
231 Ga0500554_000555 3300053102 Bacteria 7687
232 Ga0500572_003014 3300053111 Bacteria 3931
233 Ga0500595_000057 3300053119 Bacteria 82395
234 Ga0500597_005521 3300053120 Bacteria 4090
235 Ga0500614_002739 3300053123 Bacteria 3885
236 Ga0500642_0018167 3300053130 Bacteria 2714
237 Ga0500559_0015414 3300053136 Bacteria 3227
238 Ga0500603_001747 3300053150 Bacteria 4893
239 Ga0500638_103312 3300053162 Bacteria 1326
240 Ga0466962_0030653 3300061719 Bacteria 2576
241 Ga0466962_0073485 3300061719 Bacteria 1634
242 Ga0530510_0199620 3300061734 Bacteria 1485
243 Ga0500646_0001501
244 SwRhRL2b_contig_2349148
245 Ga0065704_10070132
246 Ga0065707_10193242
247 Ga0070658_10243092
248 Ga0070683_100051054
249 Ga0070690_100028426
250 Ga0070680_100026349
251 Ga0070660_100004212
252 Ga0070661_100026121
253 Ga0070675_100016276
254 Ga0070674_100040935
255 Ga0070673_100163767
256 Ga0070659_100222434
257 Ga0070714_100021078
258 Ga0070714_100047894
259 Ga0070714_100078030
260 Ga0070714_100266433
261 Ga0070713_100008922
262 Ga0070705_100043969
263 Ga0070708_100293506
264 Ga0070678_100001427
265 Ga0070681_10025754
266 Ga0070681_10104728
267 Ga0070681_10104933
268 Ga0070681_10181116
269 Ga0070706_100028219
270 Ga0070707_100014359
271 Ga0070698_100010152
272 Ga0070699_100002087
273 Ga0070699_100004014
274 Ga0070679_100004535
275 Ga0070684_100006343
276 Ga0070684_100141526
277 Ga0070665_100011035
278 Ga0068855_100160927
279 Ga0068857_100132535
280 Ga0068856_100011612
281 Ga0068852_100022960
282 Ga0068863_100403102
283 Ga0081455_10000151
284 Ga0070717_10098363
285 Ga0070717_10208620
286 Ga0075364_10094065
287 Ga0070716_100036408
288 Ga0070712_100003351
289 Ga0075428_100679045
290 Ga0075430_100009251
291 Ga0075431_100085478
292 Ga0075431_100174413
293 Ga0075431_100602299
294 Ga0075433_10010124
295 Ga0075433_10172694
296 Ga0075434_100015156
297 Ga0075429_100015236
298 Ga0075429_100203951
299 Ga0075436_100018450
300 Ga0075436_100140872
301 Ga0075435_100003159
302 Ga0075435_100032747
303 Ga0105240_10181429
304 Ga0111539_10013355
305 Ga0111539_10045964
306 Ga0111539_10689305
307 Ga0105245_10000168
308 Ga0114129_10011990
309 Ga0114129_10175334
310 Ga0157373_10094913
311 Ga0157370_10014991
312 Ga0157369_10010046
313 Ga0157375_10070714
314 Ga0182008_10006990
315 Ga0157376_10341936
316 Ga0182007_10056654
317 Ga0206353_10775805
318 Ga0207685_10033462
319 Ga0207699_10168326
320 Ga0207705_10196102
321 Ga0207684_10065602
322 Ga0207707_10006008
323 Ga0207707_10062536
324 Ga0207695_10376901
325 Ga0207671_10126299
326 Ga0207693_10002287
327 Ga0207660_10083316
328 Ga0207657_10000986
329 Ga0207657_10006140
330 Ga0207657_10026952
331 Ga0207657_10121505
332 Ga0207649_10051600
333 Ga0207649_10211351
334 Ga0207652_10009276
335 Ga0207652_10035060
336 Ga0207652_10121309
337 Ga0207646_10116961
338 Ga0207646_10345515
339 Ga0207659_10066720
340 Ga0207687_10000338
341 Ga0207700_10000028
342 Ga0207700_10056839
343 Ga0207664_10021283
344 Ga0207664_10038387
345 Ga0207664_10066990
346 Ga0207690_10147134
347 Ga0207709_10114856
348 Ga0207709_10430765
349 Ga0207670_10091395
350 Ga0207669_10114339
351 Ga0207661_10167594
352 Ga0207661_10221417
353 Ga0207667_10140274
354 Ga0207667_10290732
355 Ga0207712_10150498
356 Ga0207677_10008588
357 Ga0207702_10008698
358 Ga0207674_10060180
359 Ga0207674_10061190
360 Ga0207683_10001081
361 Ga0207428_10048399
362 Ga0207428_10085298
363 Ga0268266_10115963
364 Ga0307517_10033414
365 Ga0307515_10013471
366 Ga0307509_10000116
367 Ga0265314_10097385
368 Ga0307516_10019191
369 Ga0373940_0014439
370 Ga0373952_0006873
371 Ga0373932_0021268
372 Ga0373936_0000027
373 Ga0373956_0084736
374 Ga0373961_0000216
375 Ga0373962_0006955
376 Ga0373931_0030263
377 Ga0373937_0231920
378 Ga0373937_0425234
379 Ga0373937_0440361
380 Ga0395900_0018844
381 Ga0395900_0022850
382 Ga0395898_0026906
383 Ga0395898_0197262
384 Ga0395905_0000319
385 Ga0395905_0010261
386 Ga0395905_0011430
387 Ga0395901_0029902
388 Ga0395901_0134045
389 Ga0395901_0165750
390 Ga0395901_0168522
391 Ga0395901_0285156
392 Ga0395901_0355845
393 Ga0439453_0017539
394 Ga0451577_0142265
395 Ga0466963_0019259
396 Ga0466963_0021691
397 Ga0466963_0051018
398 Ga0466964_0005034
399 Ga0466964_0023760
400 Ga0453684_0012051
401 Ga0466971_0063574
402 Ga0466957_0086304
403 Ga0466958_0016898
404 Ga0466958_0021098
405 Ga0466967_0015746
406 Ga0466967_0033666
407 Ga0466967_0047742
408 Ga0466967_0057810
409 Ga0466967_0081349
410 Ga0466967_0086320
411 Ga0466967_0285112
412 Ga0495653_0223944
413 Ga0495584_0070389
414 Ga0495628_0173128
415 Ga0495640_0096662
416 Ga0495634_0066807
417 Ga0495680_0086722
418 Ga0495593_0034146
419 Ga0496100_0036779
420 Ga0496100_0227647
421 Ga0496101_0013238
422 Ga0496101_0021601
423 Ga0496102_0004934
424 Ga0496102_0058202
425 Ga0496102_0192388
426 Ga0496104_0209331
427 Ga0496104_0565661
428 Ga0496106_0152323
429 Ga0496107_0028380
430 Ga0496108_0040374
431 Ga0496108_0270790
432 Ga0496110_0002662
433 Ga0496110_0073197
434 Ga0496110_0236738
435 Ga0496111_0125303
436 Ga0496112_0008411
437 Ga0496112_0054354
438 Ga0496112_0100320
439 Ga0496113_0088667
440 Ga0496114_0129278
441 Ga0496114_0147637
442 Ga0496115_0008812
443 Ga0496115_0009680
444 Ga0496115_0063666
445 Ga0501034_0000209
446 Ga0501036_0145675
447 Ga0501069_0015119
448 Ga0501077_0037534
449 nmdc:mga05p37_162289_c1
450 nmdc:mga05p37_262174_c1
451 nmdc:mga05p37_296723_c1
452 nmdc:mga05p37_324622_c1
453 nmdc:mga09592_10382_c1
454 nmdc:mga09592_212480_c1
455 nmdc:mga09592_224445_c1
456 nmdc:mga0qj67_149013_c1
457 nmdc:mga06r32_127387_c1
458 nmdc:mga06r32_225810_c1
459 nmdc:mga06r32_516722_c1
460 nmdc:mga08y16_18815_c1
461 nmdc:mga08y16_280270_c1
462 nmdc:mga08y16_45538_c1
463 nmdc:mga0n895_17323_c1
464 nmdc:mga0n895_191408_c1
465 nmdc:mga0rr50_19582_c1
466 nmdc:mga0rr50_38318_c1
467 nmdc:mga08x19_111696_c1
468 nmdc:mga0a205_17077_c1
469 Ga0495601_0058353
470 Ga0500583_0108370
471 Ga0500566_0053331
472 Ga0500640_003157
473 Ga0500554_000555
474 Ga0500572_003014
475 Ga0500595_000057
476 Ga0500597_005521
477 Ga0500614_002739
478 Ga0500642_0018167
479 Ga0500559_0015414
480 Ga0500603_001747
481 Ga0500638_103312
482 Ga0466962_0030653
483 Ga0466962_0073485
484 Ga0530510_0199620

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08352

oligo_HPY

Oligopeptide/dipeptide transporter, C-terminal region

274

341

0.96

PF00005

ABC_tran

ABC transporter

70

223

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
3tuj-assembly1.cif.gz_C inward facing conformations of the metni methionine abc transporter: dm crystal form 0.9427 5 265
7caf-assembly1.cif.gz_C mycobacterium smegmatis lpqy-sugabc complex in the pre-translocation state 0.9423 6 259
1f3o-assembly1.cif.gz_A-2 crystal structure of mj0796 atp-binding cassette 0.9408 6 240
7cad-assembly1.cif.gz_D mycobacterium smegmatis sugabc complex 0.9398 6 257
7z19-assembly1.cif.gz_I e. coli c-p lyase bound to a single phnk abc domain 0.9396 3 259
ID Description Score Start End Superfamily
af_Q2FZR0_1_324_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9754 3 320 3.40.50.300
af_P37313_10_333_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9739 3 321 3.40.50.300
af_Q2G1F8_275_530_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9737 5 262 3.40.50.300
af_P33916_272_529_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9716 2 258 3.40.50.300
af_P77737_9_333_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9627 3 322 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A7H0HY10-F1-model_v4 ATP-binding cassette domain-containing protein 0.9872 3 320 GO:0005524
GO:0015833
GO:0016887
GO:0055085
AF-A0A366IF50-F1-model_v4 Peptide/nickel transport system ATP-binding protein/oligopeptide transport system ATP-binding protein 0.9804 1 322 GO:0005524
GO:0015833
GO:0016887
GO:0055085
AF-A0A6H1C8J0-F1-model_v4 ATP-binding cassette domain-containing protein 0.978 1 319 GO:0005524
GO:0015833
GO:0016887
GO:0055085
AF-A0A1Y4DNJ7-F1-model_v4 Peptide ABC transporter ATP-binding protein 0.9771 3 320 GO:0005524
GO:0015833
GO:0016887
GO:0055085
AF-A0A1Q7EK49-F1-model_v4 Peptide ABC transporter substrate-binding protein 0.9763 2 277 GO:0005524
GO:0015833
GO:0016887
GO:0055085

Map