F354634

General Info

Members Datasets Scaffolds Average Seq Length
242 145 484 563

Family's Representative Sequence

Representative Sequence 3300009551|Ga0105238_10010841|Ga0105238_100108412
Length 606
Sequence VLFVAKFDLCPRFDIEKLYQIQTTESRSYRKMKKRIHALVSCAAMLSFALACTNAPTNLNTNSGATNNSALTELKPAFDSITANDILQHTKVLSADEYEGRGPGTKGEELTVKYLTEQYQRLGLKPGNPDGTYVQKVPLVGFTGEPTASFTVGGKQMNLTFPKDYVAVSRRFVPESTVENSDMVFVGYGVVAPEYGWDDYKGLDVRGKTIVMLINDPQVPDSADPTKLDDKMFKGKAMTYYGRWTYKYEIAAQKGAAAAVIVHETGPAGYPYEVVSGSWSRENFDIQTPDKNMGRAAVESWITTDRAKELFTASGQDFDALKKAALSKDFKPVALNAKANMTVKNTLREINSNNVIGKLEGSDPALKNEYVIYTAHWDHLGRDPKLAGDQIYNGALDNASGTAALLEIAEAFTKLATPPKRSVLFLSVTAEEKGLLGAKYYAENPLYPLNKTLANINMDGVNQWGRTKDITMVGDDNSTLIDLLREAADSQHRVVNPDPESEKGFYYRSDHFEFAKQGVPALYTDSGINYEGKDAAFSKQKRDEYTNNDYHKVSDEVKPDWDLTGAVDDAQLLTMIGYRVAQGDKFPEWKAGSEFKAKRDAMIKGS

Samples

Sample ID Description Type Environment
1 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
4 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
7 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
8 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
24 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
25 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
33 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
34 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
37 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
38 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
39 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
40 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
41 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
42 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
43 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
45 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
47 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
49 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
50 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
51 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
52 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
53 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
54 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
59 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
82 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
85 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
86 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
87 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
88 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
89 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
90 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
91 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
92 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
93 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
94 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
95 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
96 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
97 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
98 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
99 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
100 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
101 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
102 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
103 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
104 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
105 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
106 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
107 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
108 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
109 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
110 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
111 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
112 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
113 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
114 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
115 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
116 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
119 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
120 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
121 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
122 3300049656 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought Metagenome Rhizosphere
123 3300049660 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_B_0_control Metagenome Rhizosphere
124 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
125 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
126 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
127 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
128 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
129 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
130 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
131 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
132 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049851 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_B_0_drought Metagenome Rhizosphere
134 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
135 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
136 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
137 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
138 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
139 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
140 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
141 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
142 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
143 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
144 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
145 2920107658 Aquisphaera insulae JC669 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.59
Metatranscriptomes 0
Isolates 0.41

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.24
Nodule 0
Rhizoplane 0.83
Rhizosphere 97.11
Stem 0
Stem Tuber 0
Unclassified 3.72

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105238_10010841 3300009551 Bacteria 9160
2 SwRhRL2b_contig_3431342 2162886007 Unclassified 1935
3 JGI24751J29686_10000153 3300002459 Bacteria 33009
4 JGI25406J46586_10004858 3300003203 Bacteria 6248
5 rootL2_10021234 3300003322 Bacteria 8130
6 Ga0065712_10000897 3300005290 Bacteria 7567
7 Ga0065712_10010657 3300005290 Bacteria 3682
8 Ga0065715_10005688 3300005293 Bacteria 5475
9 Ga0065707_10001284 3300005295 Bacteria 7747
10 Ga0065707_10092204 3300005295 Unclassified 3807
11 Ga0065707_10101450 3300005295 Bacteria 2863
12 Ga0065707_10110273 3300005295 Bacteria 2430
13 Ga0070683_100036817 3300005329 Bacteria 4478
14 Ga0070670_100000096 3300005331 Bacteria 81761
15 Ga0070670_100003408 3300005331 Bacteria 13183
16 Ga0070670_100018909 3300005331 Bacteria 5909
17 Ga0070689_100005754 3300005340 Bacteria 8502
18 Ga0070689_100013237 3300005340 Bacteria 5964
19 Ga0070689_100044021 3300005340 Bacteria 3434
20 Ga0070691_10049179 3300005341 Bacteria 2008
21 Ga0070669_100012840 3300005353 Bacteria 5948
22 Ga0070669_100032439 3300005353 Bacteria 3773
23 Ga0070675_100028614 3300005354 Bacteria 4485
24 Ga0070671_100060657 3300005355 Bacteria 3149
25 Ga0070673_100004839 3300005364 Bacteria 8565
26 Ga0070673_100005130 3300005364 Bacteria 8352
27 Ga0070673_100031851 3300005364 Bacteria 3962
28 Ga0070673_100093270 3300005364 Bacteria 2465
29 Ga0070713_100013594 3300005436 Bacteria 6018
30 Ga0070700_100000056 3300005441 Bacteria 83455
31 Ga0070694_100001238 3300005444 Bacteria 14777
32 Ga0070699_100022736 3300005518 Bacteria 5404
33 Ga0070697_100000084 3300005536 Bacteria 77273
34 Ga0070672_100006315 3300005543 Bacteria 7950
35 Ga0070686_100032195 3300005544 Bacteria 3212
36 Ga0070695_100000417 3300005545 Bacteria 22026
37 Ga0070695_100005101 3300005545 Bacteria 7738
38 Ga0070696_100000783 3300005546 Bacteria 20460
39 Ga0068857_100067610 3300005577 Bacteria 3180
40 Ga0068859_100007286 3300005617 Bacteria 11220
41 Ga0068859_100007758 3300005617 Bacteria 10897
42 Ga0068864_100020976 3300005618 Bacteria 5471
43 Ga0068861_100066652 3300005719 Bacteria 2776
44 Ga0068861_100114384 3300005719 Bacteria 2166
45 Ga0068858_100112843 3300005842 Bacteria 2538
46 Ga0068860_100028728 3300005843 Bacteria 5353
47 Ga0068860_100040900 3300005843 Bacteria 4429
48 Ga0068860_100051548 3300005843 Bacteria 3916
49 Ga0068860_100068835 3300005843 Bacteria 3363
50 Ga0081539_10001534 3300005985 Bacteria 38671
51 Ga0081539_10003550 3300005985 Bacteria 18946
52 Ga0075364_10036828 3300006051 Bacteria 3165
53 Ga0075367_10005071 3300006178 Bacteria 6500
54 Ga0097621_100033231 3300006237 Bacteria 4106
55 Ga0068871_100019962 3300006358 Bacteria 5125
56 Ga0068871_100032637 3300006358 Bacteria 4115
57 Ga0075428_100029885 3300006844 Bacteria 6027
58 Ga0075428_100122428 3300006844 Unclassified 2832
59 Ga0075428_100161882 3300006844 Bacteria 2429
60 Ga0075430_100067592 3300006846 Bacteria 3000
61 Ga0075430_100073481 3300006846 Bacteria 2867
62 Ga0075431_100065928 3300006847 Bacteria 3738
63 Ga0075431_100098783 3300006847 Bacteria 3013
64 Ga0075431_100106478 3300006847 Bacteria 2893
65 Ga0075431_100123469 3300006847 Bacteria 2671
66 Ga0075433_10056097 3300006852 Unclassified 3440
67 Ga0075434_100055747 3300006871 Bacteria 3927
68 Ga0075429_100018760 3300006880 Bacteria 5990
69 Ga0075429_100033594 3300006880 Bacteria 4458
70 Ga0075429_100041027 3300006880 Bacteria 4030
71 Ga0075429_100080555 3300006880 Bacteria 2838
72 Ga0075429_100086028 3300006880 Bacteria 2740
73 Ga0097620_100007286 3300006931 Bacteria 11220
74 Ga0097620_100007758 3300006931 Bacteria 10897
75 Ga0105240_10053307 3300009093 Bacteria 5077
76 Ga0111539_10002351 3300009094 Bacteria 25174
77 Ga0111539_10004291 3300009094 Bacteria 18648
78 Ga0111539_10047996 3300009094 Bacteria 5099
79 Ga0111539_10048327 3300009094 Bacteria 5080
80 Ga0111539_10193179 3300009094 Bacteria 2375
81 Ga0111539_10233104 3300009094 Bacteria 2143
82 Ga0105247_10000241 3300009101 Bacteria 51419
83 Ga0114129_10017643 3300009147 Bacteria 10162
84 Ga0114129_10064029 3300009147 Bacteria 5131
85 Ga0114129_10248425 3300009147 Bacteria 2389
86 Ga0105243_10001813 3300009148 Bacteria 18294
87 Ga0105242_10016698 3300009176 Bacteria 5710
88 Ga0105242_10016789 3300009176 Bacteria 5697
89 Ga0105242_10031368 3300009176 Bacteria 4244
90 Ga0105242_10167340 3300009176 Bacteria 1929
91 Ga0105248_10004965 3300009177 Bacteria 14700
92 Ga0105248_10005072 3300009177 Bacteria 14536
93 Ga0105237_10138321 3300009545 Bacteria 2430
94 Ga0105238_10002420 3300009551 Bacteria 18719
95 Ga0105249_10004995 3300009553 Bacteria 11449
96 Ga0105249_10079523 3300009553 Bacteria 3043
97 Ga0105239_10119194 3300010375 Bacteria 2929
98 Ga0157378_10025995 3300013297 Bacteria 5159
99 Ga0157378_10100779 3300013297 Bacteria 2637
100 Ga0163162_10006885 3300013306 Bacteria 11031
101 Ga0163162_10068350 3300013306 Bacteria 3604
102 Ga0163162_10195762 3300013306 Bacteria 2150
103 Ga0157375_10008114 3300013308 Bacteria 9189
104 Ga0163163_10000109 3300014325 Bacteria 87294
105 Ga0163163_10037269 3300014325 Bacteria 4729
106 Ga0163163_10051087 3300014325 Bacteria 4075
107 Ga0157380_10140100 3300014326 Bacteria 2077
108 Ga0207710_10000811 3300025900 Bacteria 16929
109 Ga0207710_10010261 3300025900 Bacteria 3941
110 Ga0207647_10001526 3300025904 Bacteria 17817
111 Ga0207647_10058727 3300025904 Bacteria 2355
112 Ga0207645_10017227 3300025907 Bacteria 4771
113 Ga0207645_10070505 3300025907 Bacteria 2236
114 Ga0207643_10007877 3300025908 Bacteria 5717
115 Ga0207684_10036464 3300025910 Bacteria 4174
116 Ga0207662_10015342 3300025918 Bacteria 4311
117 Ga0207681_10011610 3300025923 Bacteria 5414
118 Ga0207694_10001110 3300025924 Bacteria 23278
119 Ga0207694_10012936 3300025924 Bacteria 6285
120 Ga0207650_10000009 3300025925 Bacteria 483583
121 Ga0207650_10032955 3300025925 Bacteria 3750
122 Ga0207650_10070093 3300025925 Unclassified 2634
123 Ga0207706_10073541 3300025933 Bacteria 3006
124 Ga0207706_10083174 3300025933 Bacteria 2814
125 Ga0207686_10037887 3300025934 Bacteria 2913
126 Ga0207670_10000123 3300025936 Bacteria 51150
127 Ga0207670_10012579 3300025936 Bacteria 4956
128 Ga0207691_10114303 3300025940 Bacteria 2398
129 Ga0207711_10006455 3300025941 Bacteria 9871
130 Ga0207711_10130193 3300025941 Bacteria 2255
131 Ga0207689_10048863 3300025942 Bacteria 3490
132 Ga0207651_10029314 3300025960 Bacteria 3485
133 Ga0207651_10033042 3300025960 Bacteria 3332
134 Ga0207639_10081457 3300026041 Bacteria 2564
135 Ga0207708_10000089 3300026075 Bacteria 72013
136 Ga0207708_10006250 3300026075 Bacteria 8825
137 Ga0207641_10026297 3300026088 Bacteria 4802
138 Ga0207676_10042453 3300026095 Unclassified 3498
139 Ga0207676_10072595 3300026095 Unclassified 2767
140 Ga0207674_10020913 3300026116 Bacteria 7061
141 Ga0207674_10047745 3300026116 Bacteria 4387
142 Ga0207674_10061869 3300026116 Unclassified 3782
143 Ga0207674_10094188 3300026116 Bacteria 2982
144 Ga0207675_100102013 3300026118 Bacteria 2704
145 Ga0207428_10004758 3300027907 Bacteria 12833
146 Ga0207428_10005578 3300027907 Bacteria 11703
147 Ga0207428_10007684 3300027907 Bacteria 9814
148 Ga0268265_10093835 3300028380 Bacteria 2405
149 Ga0268264_10020126 3300028381 Bacteria 5452
150 Ga0265319_1002121 3300028563 Bacteria 11112
151 Ga0265336_10021404 3300028666 Bacteria 2068
152 Ga0265329_10001869 3300031242 Bacteria 9957
153 Ga0265331_10007227 3300031250 Bacteria 6444
154 Ga0265327_10000063 3300031251 Bacteria 232763
155 Ga0307513_10003183 3300031456 Bacteria 22411
156 Ga0307408_100003842 3300031548 Bacteria 10218
157 Ga0265313_10001356 3300031595 Bacteria 23076
158 Ga0265313_10002334 3300031595 Bacteria 16609
159 Ga0265313_10006177 3300031595 Bacteria 8589
160 Ga0265314_10000031 3300031711 Bacteria 265924
161 Ga0265314_10006857 3300031711 Bacteria 9981
162 Ga0265314_10051735 3300031711 Bacteria 2860
163 Ga0265342_10002431 3300031712 Bacteria 16101
164 Ga0307410_10083471 3300031852 Bacteria 2250
165 Ga0307406_10004959 3300031901 Bacteria 7250
166 Ga0307406_10023268 3300031901 Bacteria 3684
167 Ga0307407_10019996 3300031903 Bacteria 3420
168 Ga0307416_100050563 3300032002 Bacteria 3314
169 Ga0307416_100135023 3300032002 Bacteria 2230
170 Ga0307414_10002649 3300032004 Bacteria 9419
171 Ga0307411_10026537 3300032005 Bacteria 3490
172 Ga0316574_0013478 3300035398 Bacteria 4703
173 Ga0373937_0008635 3300036401 Bacteria 8851
174 Ga0395898_0236199 3300037466 Bacteria 1743
175 Ga0395905_0055331 3300037471 Bacteria 3713
176 Ga0436361_0294661 3300039447 Bacteria 2201
177 Ga0436361_0379750 3300039447 Bacteria 27271
178 Ga0451577_0000059 3300042876 Bacteria 271425
179 Ga0451577_0033377 3300042876 Bacteria 4640
180 Ga0451577_0057181 3300042876 Bacteria 3478
181 Ga0451576_0000182 3300045051 Bacteria 157929
182 Ga0451576_0004216 3300045051 Bacteria 18889
183 Ga0451576_0120975 3300045051 Bacteria 2725
184 Ga0495616_0009220 3300046513 Bacteria 5786
185 Ga0495621_0010904 3300046539 Bacteria 2796
186 Ga0495667_0001729 3300046559 Bacteria 14507
187 Ga0495675_0036164 3300047444 Bacteria 3151
188 Ga0496109_0033262 3300048912 Bacteria 4638
189 Ga0496115_0003287 3300048918 Bacteria 11603
190 Ga0501292_003190 3300049515 Bacteria 2175
191 Ga0501298_001301 3300049521 Bacteria 3659
192 Ga0501299_001376 3300049522 Bacteria 3104
193 Ga0501038_0001556 3300049574 Bacteria 21204
194 Ga0501042_0028583 3300049578 Bacteria 3930
195 Ga0501070_0061950 3300049586 Bacteria 3099
196 Ga0501072_0049327 3300049588 Bacteria 3314
197 Ga0501072_0056259 3300049588 Bacteria 3100
198 Ga0501072_0125979 3300049588 Bacteria 2041
199 Ga0501073_0018626 3300049589 Bacteria 5018
200 Ga0501076_0020335 3300049592 Bacteria 5081
201 Ga0501209_000314 3300049656 Bacteria 5812
202 Ga0501216_000063 3300049660 Bacteria 9519
203 Ga0501217_000084 3300049661 Bacteria 11403
204 Ga0501217_001856 3300049661 Bacteria 4049
205 Ga0501223_003604 3300049663 Bacteria 3347
206 Ga0501233_000598 3300049668 Bacteria 5876
207 Ga0501233_005321 3300049668 Bacteria 2388
208 Ga0501235_001860 3300049669 Bacteria 4514
209 Ga0501261_003303 3300049690 Bacteria 1978
210 Ga0501221_003255 3300049704 Bacteria 2668
211 Ga0501225_0000765 3300049705 Bacteria 10086
212 Ga0501225_0002386 3300049705 Bacteria 5797
213 Ga0501225_0003600 3300049705 Bacteria 4669
214 Ga0501234_000204 3300049707 Bacteria 8442
215 Ga0501234_001461 3300049707 Bacteria 3710
216 Ga0501044_0002315 3300049823 Bacteria 21705
217 Ga0501212_001377 3300049851 Bacteria 2724
218 Ga0501226_000450 3300049853 Bacteria 5787
219 nmdc:mga06z11_6157_c1 3300050494 Bacteria 4859
220 nmdc:mga05p37_145826_c1 3300050507 Bacteria 2899
221 nmdc:mga05p37_208503_c1 3300050507 Bacteria 2363
222 nmdc:mga05p37_26146_c1 3300050507 Bacteria 7097
223 nmdc:mga09592_12994_c1 3300050508 Bacteria 6796
224 nmdc:mga09592_184624_c1 3300050508 Bacteria 1804
225 nmdc:mga09592_47515_c1 3300050508 Bacteria 3617
226 nmdc:mga09592_91741_c1 3300050508 Bacteria 2596
227 nmdc:mga0qj67_31944_c1 3300050509 Bacteria 4104
228 nmdc:mga06r32_10430_c1 3300050510 Bacteria 8383
229 nmdc:mga06r32_11224_c1 3300050510 Bacteria 8071
230 nmdc:mga06r32_143489_c1 3300050510 Bacteria 2365
231 nmdc:mga08y16_124487_c1 3300050511 Bacteria 2682
232 nmdc:mga08y16_136698_c1 3300050511 Bacteria 2548
233 nmdc:mga08y16_13961_c1 3300050511 Bacteria 8455
234 nmdc:mga08y16_5724_c1 3300050511 Bacteria 13024
235 nmdc:mga08y16_6578_c1 3300050511 Bacteria 12182
236 nmdc:mga0n895_25833_c1 3300050512 Bacteria 5554
237 nmdc:mga0rr50_1926_c1 3300050513 Bacteria 11540
238 nmdc:mga0rr50_9501_c1 3300050513 Bacteria 6118
239 nmdc:mga0a205_61989_c1 3300050515 Unclassified 3613
240 Ga0501084_0032528 3300054114 Bacteria 4363
241 Ga0501084_0042505 3300054114 Bacteria 3802
242 2920110494 2920107658 Bacteria 10042636
243 Ga0105238_10010841
244 SwRhRL2b_contig_3431342
245 JGI24751J29686_10000153
246 JGI25406J46586_10004858
247 rootL2_10021234
248 Ga0065712_10000897
249 Ga0065712_10010657
250 Ga0065715_10005688
251 Ga0065707_10001284
252 Ga0065707_10092204
253 Ga0065707_10101450
254 Ga0065707_10110273
255 Ga0070683_100036817
256 Ga0070670_100000096
257 Ga0070670_100003408
258 Ga0070670_100018909
259 Ga0070689_100005754
260 Ga0070689_100013237
261 Ga0070689_100044021
262 Ga0070691_10049179
263 Ga0070669_100012840
264 Ga0070669_100032439
265 Ga0070675_100028614
266 Ga0070671_100060657
267 Ga0070673_100004839
268 Ga0070673_100005130
269 Ga0070673_100031851
270 Ga0070673_100093270
271 Ga0070713_100013594
272 Ga0070700_100000056
273 Ga0070694_100001238
274 Ga0070699_100022736
275 Ga0070697_100000084
276 Ga0070672_100006315
277 Ga0070686_100032195
278 Ga0070695_100000417
279 Ga0070695_100005101
280 Ga0070696_100000783
281 Ga0068857_100067610
282 Ga0068859_100007286
283 Ga0068859_100007758
284 Ga0068864_100020976
285 Ga0068861_100066652
286 Ga0068861_100114384
287 Ga0068858_100112843
288 Ga0068860_100028728
289 Ga0068860_100040900
290 Ga0068860_100051548
291 Ga0068860_100068835
292 Ga0081539_10001534
293 Ga0081539_10003550
294 Ga0075364_10036828
295 Ga0075367_10005071
296 Ga0097621_100033231
297 Ga0068871_100019962
298 Ga0068871_100032637
299 Ga0075428_100029885
300 Ga0075428_100122428
301 Ga0075428_100161882
302 Ga0075430_100067592
303 Ga0075430_100073481
304 Ga0075431_100065928
305 Ga0075431_100098783
306 Ga0075431_100106478
307 Ga0075431_100123469
308 Ga0075433_10056097
309 Ga0075434_100055747
310 Ga0075429_100018760
311 Ga0075429_100033594
312 Ga0075429_100041027
313 Ga0075429_100080555
314 Ga0075429_100086028
315 Ga0097620_100007286
316 Ga0097620_100007758
317 Ga0105240_10053307
318 Ga0111539_10002351
319 Ga0111539_10004291
320 Ga0111539_10047996
321 Ga0111539_10048327
322 Ga0111539_10193179
323 Ga0111539_10233104
324 Ga0105247_10000241
325 Ga0114129_10017643
326 Ga0114129_10064029
327 Ga0114129_10248425
328 Ga0105243_10001813
329 Ga0105242_10016698
330 Ga0105242_10016789
331 Ga0105242_10031368
332 Ga0105242_10167340
333 Ga0105248_10004965
334 Ga0105248_10005072
335 Ga0105237_10138321
336 Ga0105238_10002420
337 Ga0105249_10004995
338 Ga0105249_10079523
339 Ga0105239_10119194
340 Ga0157378_10025995
341 Ga0157378_10100779
342 Ga0163162_10006885
343 Ga0163162_10068350
344 Ga0163162_10195762
345 Ga0157375_10008114
346 Ga0163163_10000109
347 Ga0163163_10037269
348 Ga0163163_10051087
349 Ga0157380_10140100
350 Ga0207710_10000811
351 Ga0207710_10010261
352 Ga0207647_10001526
353 Ga0207647_10058727
354 Ga0207645_10017227
355 Ga0207645_10070505
356 Ga0207643_10007877
357 Ga0207684_10036464
358 Ga0207662_10015342
359 Ga0207681_10011610
360 Ga0207694_10001110
361 Ga0207694_10012936
362 Ga0207650_10000009
363 Ga0207650_10032955
364 Ga0207650_10070093
365 Ga0207706_10073541
366 Ga0207706_10083174
367 Ga0207686_10037887
368 Ga0207670_10000123
369 Ga0207670_10012579
370 Ga0207691_10114303
371 Ga0207711_10006455
372 Ga0207711_10130193
373 Ga0207689_10048863
374 Ga0207651_10029314
375 Ga0207651_10033042
376 Ga0207639_10081457
377 Ga0207708_10000089
378 Ga0207708_10006250
379 Ga0207641_10026297
380 Ga0207676_10042453
381 Ga0207676_10072595
382 Ga0207674_10020913
383 Ga0207674_10047745
384 Ga0207674_10061869
385 Ga0207674_10094188
386 Ga0207675_100102013
387 Ga0207428_10004758
388 Ga0207428_10005578
389 Ga0207428_10007684
390 Ga0268265_10093835
391 Ga0268264_10020126
392 Ga0265319_1002121
393 Ga0265336_10021404
394 Ga0265329_10001869
395 Ga0265331_10007227
396 Ga0265327_10000063
397 Ga0307513_10003183
398 Ga0307408_100003842
399 Ga0265313_10001356
400 Ga0265313_10002334
401 Ga0265313_10006177
402 Ga0265314_10000031
403 Ga0265314_10006857
404 Ga0265314_10051735
405 Ga0265342_10002431
406 Ga0307410_10083471
407 Ga0307406_10004959
408 Ga0307406_10023268
409 Ga0307407_10019996
410 Ga0307416_100050563
411 Ga0307416_100135023
412 Ga0307414_10002649
413 Ga0307411_10026537
414 Ga0316574_0013478
415 Ga0373937_0008635
416 Ga0395898_0236199
417 Ga0395905_0055331
418 Ga0436361_0294661
419 Ga0436361_0379750
420 Ga0451577_0000059
421 Ga0451577_0033377
422 Ga0451577_0057181
423 Ga0451576_0000182
424 Ga0451576_0004216
425 Ga0451576_0120975
426 Ga0495616_0009220
427 Ga0495621_0010904
428 Ga0495667_0001729
429 Ga0495675_0036164
430 Ga0496109_0033262
431 Ga0496115_0003287
432 Ga0501292_003190
433 Ga0501298_001301
434 Ga0501299_001376
435 Ga0501038_0001556
436 Ga0501042_0028583
437 Ga0501070_0061950
438 Ga0501072_0049327
439 Ga0501072_0056259
440 Ga0501072_0125979
441 Ga0501073_0018626
442 Ga0501076_0020335
443 Ga0501209_000314
444 Ga0501216_000063
445 Ga0501217_000084
446 Ga0501217_001856
447 Ga0501223_003604
448 Ga0501233_000598
449 Ga0501233_005321
450 Ga0501235_001860
451 Ga0501261_003303
452 Ga0501221_003255
453 Ga0501225_0000765
454 Ga0501225_0002386
455 Ga0501225_0003600
456 Ga0501234_000204
457 Ga0501234_001461
458 Ga0501044_0002315
459 Ga0501212_001377
460 Ga0501226_000450
461 nmdc:mga06z11_6157_c1
462 nmdc:mga05p37_145826_c1
463 nmdc:mga05p37_208503_c1
464 nmdc:mga05p37_26146_c1
465 nmdc:mga09592_12994_c1
466 nmdc:mga09592_184624_c1
467 nmdc:mga09592_47515_c1
468 nmdc:mga09592_91741_c1
469 nmdc:mga0qj67_31944_c1
470 nmdc:mga06r32_10430_c1
471 nmdc:mga06r32_11224_c1
472 nmdc:mga06r32_143489_c1
473 nmdc:mga08y16_124487_c1
474 nmdc:mga08y16_136698_c1
475 nmdc:mga08y16_13961_c1
476 nmdc:mga08y16_5724_c1
477 nmdc:mga08y16_6578_c1
478 nmdc:mga0n895_25833_c1
479 nmdc:mga0rr50_1926_c1
480 nmdc:mga0rr50_9501_c1
481 nmdc:mga0a205_61989_c1
482 Ga0501084_0032528
483 Ga0501084_0042505
484 2920110494

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04389

Peptidase_M28

Peptidase family M28

354

575

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
6esl-assembly1.cif.gz_B crystal structure of the legionella pneumoppila lapa 0.8096 321 552
6esl-assembly1.cif.gz_A crystal structure of the legionella pneumoppila lapa 0.8015 321 552
6ica-assembly2.cif.gz_B the crystal structure of legionella pneumophila lapa aminopeptidase 0.7997 321 554
6ica-assembly1.cif.gz_A the crystal structure of legionella pneumophila lapa aminopeptidase 0.7949 321 554
6ica-assembly3.cif.gz_C the crystal structure of legionella pneumophila lapa aminopeptidase 0.7938 321 554
ID Description Score Start End Superfamily
5ib9A01 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.8195 315 555 3.40.630.10
af_P37302_266_505_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.7894 323 554 3.40.630.10
1xjoA00 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.7829 319 550 3.40.630.10
1cp6A00 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.7674 321 554 3.40.630.10
af_Q5AA00_122_414_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.7536 319 552 3.40.630.10
ID Description Score Start End GO Terms
AF-A0A7W1P3I4-F1-model_v4 M20/M25/M40 family metallo-hydrolase 0.9953 48 574 GO:0006508
GO:0008235
AF-A0A257SJJ6-F1-model_v4 Peptidase M28 domain-containing protein 0.9938 341 573 GO:0006508
GO:0008235
AF-A0A2V8BLE0-F1-model_v4 Peptidase M28 0.9911 50 573 GO:0006508
GO:0008235
AF-A0A7C1R0J3-F1-model_v4 M28 family peptidase 0.989 402 574
AF-A0A7C7H885-F1-model_v4 M28 family peptidase 0.9887 388 572

Map