F352404
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 239 | 175 | 478 | 262 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|2738543012|2739244577 |
| Length | 290 |
| Sequence | APTPEVKELLVGSETAPVPMVPFADDVTDEVTQRRFGGLERLYGVEGARRIRASHVVVVGIGGVGSWSAEALARSGVSRLTLVDLDHVSESNINRQIHALSTTVGQAKIEAMRDRIALINPECDVRCIDEFVEPGNWPQLLGSDPVDAVIDACDQIKAKTAMAVWARATGGHAFISVGAAGGKRQAHKVDIDDLSATTHDPLLAQLRYQLRKHHGAPREGRKIGIACVFSREAVAQPDASCAIEAGGDGSLNCHGYGSVVAVTATFGQCAAGWVIDRLAAGSQKPPKIKL |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300002704 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB | Metagenome | Unclassified |
| 2 | 3300002705 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS | Metagenome | Unclassified |
| 3 | 3300002738 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA | Metagenome | Unclassified |
| 4 | 3300002741 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL | Metagenome | Unclassified |
| 5 | 3300002987 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB | Metagenome | Endosphere |
| 6 | 3300003187 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB | Metagenome | Endosphere |
| 7 | 3300003354 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS | Metagenome | Endosphere |
| 8 | 3300003374 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF | Metagenome | Endosphere |
| 9 | 3300003771 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 | Metagenome | Endosphere |
| 10 | 3300003773 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 | Metagenome | Endosphere |
| 11 | 3300003775 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 | Metagenome | Endosphere |
| 12 | 3300003781 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 | Metagenome | Endosphere |
| 13 | 3300003784 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 | Metagenome | Endosphere |
| 14 | 3300003790 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 | Metagenome | Endosphere |
| 15 | 3300003791 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 16 | 3300003792 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 | Metagenome | Endosphere |
| 17 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 18 | 3300004625 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 | Metagenome | Endosphere |
| 19 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 20 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 21 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 23 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 24 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 25 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 27 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 28 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 29 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 30 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 31 | 3300006042 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 | Metagenome | Endosphere |
| 32 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 33 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 34 | 3300006177 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 | Metagenome | Endosphere |
| 35 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 36 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 37 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 38 | 3300006946 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG | Metagenome | Nodule |
| 39 | 3300006948 | Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 | Metagenome | Nodule |
| 40 | 3300009092 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG | Metagenome | Rhizosphere |
| 41 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 43 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 45 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 46 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 47 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300021361 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 | Metagenome | Rhizosphere |
| 49 | 3300025206 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) | Metagenome | Unclassified |
| 50 | 3300025245 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) | Metagenome | Endosphere |
| 51 | 3300025246 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) | Metagenome | Unclassified |
| 52 | 3300025250 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) | Metagenome | Unclassified |
| 53 | 3300025256 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) | Metagenome | Unclassified |
| 54 | 3300025258 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) | Metagenome | Endosphere |
| 55 | 3300025263 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 56 | 3300025273 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 57 | 3300025284 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 58 | 3300025291 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 59 | 3300025292 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 60 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 61 | 3300025295 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 62 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 63 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 64 | 3300025299 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 65 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 66 | 3300025303 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 67 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 68 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300027111 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) | Metagenome | Nodule |
| 87 | 3300027614 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300027876 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 91 | 3300031238 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG | Metagenome | Rhizosphere |
| 92 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 93 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 94 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 95 | 3300031649 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM | Metagenome | Unclassified |
| 96 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 97 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 98 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 99 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 100 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 101 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 102 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 103 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 104 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 105 | 3300041413 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 | Metagenome | Rhizosphere |
| 106 | 3300041460 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG | Metagenome | Rhizoplane |
| 107 | 3300041492 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG | Metagenome | Unclassified |
| 108 | 3300041512 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG | Metagenome | Unclassified |
| 109 | 3300042125 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 | Metagenome | Rhizosphere |
| 110 | 3300042134 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 | Metagenome | Rhizosphere |
| 111 | 3300042435 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 | Metagenome | Rhizosphere |
| 112 | 3300042439 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 | Metagenome | Rhizosphere |
| 113 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 114 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 115 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 116 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 117 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 118 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 119 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 120 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 121 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 122 | 3300046528 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300046530 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300046542 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300046615 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300046664 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300047447 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 129 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 130 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 131 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 132 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 133 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 134 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 135 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 136 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 137 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 138 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 139 | 3300049663 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought | Metagenome | Rhizosphere |
| 140 | 3300049763 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control | Metagenome | Rhizosphere |
| 141 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 142 | 3300050489 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation | Metagenome | Endosphere |
| 143 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 144 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 145 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 146 | 3300050495 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation | Metagenome | Endosphere |
| 147 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 148 | 3300053088 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere | Metagenome | Endosphere |
| 149 | 3300053094 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere | Metagenome | Endosphere |
| 150 | 3300053096 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere | Metagenome | Endosphere |
| 151 | 3300053108 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere | Metagenome | Endosphere |
| 152 | 3300053117 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere | Metagenome | Endosphere |
| 153 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 154 | 3300053148 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere | Metagenome | Endosphere |
| 155 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 156 | 3300053161 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere | Metagenome | Endosphere |
| 157 | 3300053730 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere | Metagenome | Endosphere |
| 158 | 3300055283 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere | Metagenome | Endosphere |
| 159 | 2738543012 | Acidovorax sp. CF301 | Isolate | Unclassified |
| 160 | 2511231002 | Polaromonas sp. CF318 | Isolate | Rhizosphere |
| 161 | 2547132374 | Acidovorax radicis N35 | Isolate | Unclassified |
| 162 | 2643221570 | Acidovorax sp. Root568 | Isolate | Unclassified |
| 163 | 2643221596 | Acidovorax sp. Root70 | Isolate | Unclassified |
| 164 | 2643221609 | Acidovorax sp. Root217 | Isolate | Unclassified |
| 165 | 2643221611 | Acidovorax sp. Root219 | Isolate | Unclassified |
| 166 | 2643221652 | Acidovorax sp. Root402 | Isolate | Unclassified |
| 167 | 2643221717 | Acidovorax sp. Root267 | Isolate | Unclassified |
| 168 | 2721755523 | Delftia sp. HK171 | Isolate | Unclassified |
| 169 | 2816332133 | Acidovorax radicis 2721A | Isolate | Unclassified |
| 170 | 2839138175 | Delftia acidovorans B15 | Isolate | Rhizosphere |
| 171 | 2881101125 | Ramlibacter rhizophilus CCTCC AB2015357 | Isolate | Rhizosphere |
| 172 | 2894023352 | Diaphorobacter ruginosibacter DSM 27467 | Isolate | Nodule |
| 173 | 2904479285 | Comamonas sediminis 4487 | Isolate | Rhizosphere |
| 174 | 2939631187 | Ottowia thiooxydans 2709 | Isolate | Rhizosphere |
| 175 | 2990710928 | Acidovorax delafieldii SLBN-75 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 92.89 |
| Metatranscriptomes | 0 |
| Isolates | 7.11 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 34.31 |
| Nodule | 2.09 |
| Rhizoplane | 0.84 |
| Rhizosphere | 48.54 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25155J39150_1000002 | 3300002704 | Bacteria | 292156 |
| 2 | JGI25156J39149_1000003 | 3300002705 | Bacteria | 305434 |
| 3 | JGI25154J39366_1000009 | 3300002738 | Bacteria | 305408 |
| 4 | JGI25157J39369_1000002 | 3300002741 | Bacteria | 305434 |
| 5 | JGI25159J45721_1000296 | 3300002987 | Bacteria | 23321 |
| 6 | JGI25159J45721_1002909 | 3300002987 | Bacteria | 6247 |
| 7 | JGI25151J46595_10017790 | 3300003187 | Bacteria | 3070 |
| 8 | JGI25151J46595_10053898 | 3300003187 | Bacteria | 1339 |
| 9 | JGI25160J50197_1000123 | 3300003354 | Bacteria | 70031 |
| 10 | JGI25161J50226_1000032 | 3300003374 | Bacteria | 138440 |
| 11 | Ga0055526_1009645 | 3300003771 | Bacteria | 4610 |
| 12 | Ga0055526_1009664 | 3300003771 | Bacteria | 4603 |
| 13 | Ga0055537_1000079 | 3300003773 | Bacteria | 69953 |
| 14 | Ga0055537_1007570 | 3300003773 | Bacteria | 2606 |
| 15 | Ga0055524_1000012 | 3300003775 | Bacteria | 260384 |
| 16 | Ga0055536_1003008 | 3300003781 | Bacteria | 9231 |
| 17 | Ga0055534_1000670 | 3300003784 | Bacteria | 17182 |
| 18 | Ga0055534_1013265 | 3300003784 | Bacteria | 1590 |
| 19 | Ga0055528_1000563 | 3300003790 | Bacteria | 28211 |
| 20 | Ga0055530_10000218 | 3300003791 | Bacteria | 51314 |
| 21 | Ga0055540_1000012 | 3300003792 | Bacteria | 262667 |
| 22 | Ga0055540_1001678 | 3300003792 | Bacteria | 12800 |
| 23 | Ga0055531_10000612 | 3300003794 | Bacteria | 30958 |
| 24 | Ga0055531_10002045 | 3300003794 | Bacteria | 13913 |
| 25 | Ga0055543_1000405 | 3300004625 | Bacteria | 27361 |
| 26 | Ga0065165_1006669 | 3300005262 | Bacteria | 5955 |
| 27 | Ga0065165_1027677 | 3300005262 | Bacteria | 1843 |
| 28 | Ga0065704_10075962 | 3300005289 | Bacteria | 5330 |
| 29 | Ga0065704_10100536 | 3300005289 | Bacteria | 2269 |
| 30 | Ga0070670_100028414 | 3300005331 | Bacteria | 4813 |
| 31 | Ga0068869_100211126 | 3300005334 | Bacteria | 1535 |
| 32 | Ga0070680_100031123 | 3300005336 | Bacteria | 4289 |
| 33 | Ga0068868_100079653 | 3300005338 | Bacteria | 2624 |
| 34 | Ga0070660_100015382 | 3300005339 | Bacteria | 5522 |
| 35 | Ga0070681_10050144 | 3300005458 | Bacteria | 4165 |
| 36 | Ga0070681_10387329 | 3300005458 | Bacteria | 1309 |
| 37 | Ga0070679_100040883 | 3300005530 | Bacteria | 4614 |
| 38 | Ga0070679_100058637 | 3300005530 | Bacteria | 3836 |
| 39 | Ga0068852_100093461 | 3300005616 | Bacteria | 2696 |
| 40 | Ga0068862_100665324 | 3300005844 | Bacteria | 1006 |
| 41 | Ga0075365_10013429 | 3300006038 | Bacteria | 4898 |
| 42 | Ga0075365_10042540 | 3300006038 | Bacteria | 2970 |
| 43 | Ga0075365_10063007 | 3300006038 | Bacteria | 2481 |
| 44 | Ga0075368_10032013 | 3300006042 | Bacteria | 2041 |
| 45 | Ga0075363_100162254 | 3300006048 | Bacteria | 1266 |
| 46 | Ga0075364_10014593 | 3300006051 | Bacteria | 4857 |
| 47 | Ga0075362_10159465 | 3300006177 | Bacteria | 1085 |
| 48 | Ga0075367_10046810 | 3300006178 | Bacteria | 2543 |
| 49 | Ga0075366_10000575 | 3300006195 | Bacteria | 17232 |
| 50 | Ga0075370_10097399 | 3300006353 | Bacteria | 1701 |
| 51 | Ga0075370_10128729 | 3300006353 | Bacteria | 1477 |
| 52 | Ga0079104_1000011 | 3300006946 | Bacteria | 359962 |
| 53 | Ga0079104_1037945 | 3300006946 | Bacteria | 1145 |
| 54 | Ga0099826_10102800 | 3300006948 | Bacteria | 1720 |
| 55 | Ga0105250_10011084 | 3300009092 | Bacteria | 3745 |
| 56 | Ga0105240_10013394 | 3300009093 | Bacteria | 11262 |
| 57 | Ga0105245_10149326 | 3300009098 | Bacteria | 2208 |
| 58 | Ga0105243_10003099 | 3300009148 | Bacteria | 13673 |
| 59 | Ga0105243_11006427 | 3300009148 | Bacteria | 836 |
| 60 | Ga0105241_10055708 | 3300009174 | Bacteria | 3030 |
| 61 | Ga0105242_10008338 | 3300009176 | Bacteria | 7963 |
| 62 | Ga0105239_10203920 | 3300010375 | Bacteria | 2216 |
| 63 | Ga0157376_10105291 | 3300014969 | Bacteria | 2473 |
| 64 | Ga0213872_10001418 | 3300021361 | Bacteria | 15732 |
| 65 | Ga0209435_100001 | 3300025206 | Bacteria | 1424171 |
| 66 | Ga0207425_1003895 | 3300025245 | Bacteria | 4631 |
| 67 | Ga0209646_1000001 | 3300025246 | Bacteria | 3092932 |
| 68 | Ga0209026_1000003 | 3300025250 | Bacteria | 1060571 |
| 69 | Ga0209759_1000001 | 3300025256 | Bacteria | 2799452 |
| 70 | Ga0209129_1014055 | 3300025258 | Bacteria | 1724 |
| 71 | Ga0209565_1000004 | 3300025263 | Bacteria | 983150 |
| 72 | Ga0209565_1001092 | 3300025263 | Bacteria | 13466 |
| 73 | Ga0209673_1000074 | 3300025273 | Bacteria | 233552 |
| 74 | Ga0209673_1041663 | 3300025273 | Bacteria | 1301 |
| 75 | Ga0209130_1000082 | 3300025284 | Bacteria | 164441 |
| 76 | Ga0209130_1000094 | 3300025284 | Bacteria | 145569 |
| 77 | Ga0209675_1000061 | 3300025291 | Bacteria | 181096 |
| 78 | Ga0209675_1002917 | 3300025291 | Bacteria | 8464 |
| 79 | Ga0209676_1000029 | 3300025292 | Bacteria | 520536 |
| 80 | Ga0209676_1008437 | 3300025292 | Bacteria | 4591 |
| 81 | Ga0209025_1003017 | 3300025294 | Bacteria | 16629 |
| 82 | Ga0209025_1004374 | 3300025294 | Bacteria | 12308 |
| 83 | Ga0209025_1005993 | 3300025294 | Bacteria | 9654 |
| 84 | Ga0209025_1022984 | 3300025294 | Bacteria | 3282 |
| 85 | Ga0209564_1000979 | 3300025295 | Bacteria | 35983 |
| 86 | Ga0209564_1001145 | 3300025295 | Bacteria | 31078 |
| 87 | Ga0209564_1026225 | 3300025295 | Bacteria | 1932 |
| 88 | Ga0209758_1013129 | 3300025297 | Bacteria | 4551 |
| 89 | Ga0209050_1000003 | 3300025298 | Bacteria | 1609245 |
| 90 | Ga0209050_1014793 | 3300025298 | Bacteria | 3331 |
| 91 | Ga0209256_1000001 | 3300025299 | Bacteria | 2166974 |
| 92 | Ga0209256_1022248 | 3300025299 | Bacteria | 1924 |
| 93 | Ga0207426_1000071 | 3300025302 | Bacteria | 329539 |
| 94 | Ga0207426_1004492 | 3300025302 | Bacteria | 6766 |
| 95 | Ga0209051_1000003 | 3300025303 | Bacteria | 1609245 |
| 96 | Ga0209051_1000367 | 3300025303 | Bacteria | 65677 |
| 97 | Ga0209257_1000012 | 3300025304 | Bacteria | 1111138 |
| 98 | Ga0209257_1000018 | 3300025304 | Bacteria | 836016 |
| 99 | Ga0207705_10239842 | 3300025909 | Bacteria | 1381 |
| 100 | Ga0207707_10054560 | 3300025912 | Bacteria | 3479 |
| 101 | Ga0207695_10060364 | 3300025913 | Bacteria | 3925 |
| 102 | Ga0207660_10072440 | 3300025917 | Bacteria | 2509 |
| 103 | Ga0207657_10005903 | 3300025919 | Bacteria | 12747 |
| 104 | Ga0207652_10092897 | 3300025921 | Bacteria | 2654 |
| 105 | Ga0207650_10334811 | 3300025925 | Bacteria | 1242 |
| 106 | Ga0207687_10022164 | 3300025927 | Bacteria | 4224 |
| 107 | Ga0207664_10206739 | 3300025929 | Bacteria | 1697 |
| 108 | Ga0207709_10000074 | 3300025935 | Bacteria | 174947 |
| 109 | Ga0207689_10279160 | 3300025942 | Bacteria | 1383 |
| 110 | Ga0207667_10069392 | 3300025949 | Bacteria | 3668 |
| 111 | Ga0207668_10507951 | 3300025972 | Bacteria | 1038 |
| 112 | Ga0207640_10345134 | 3300025981 | Bacteria | 1194 |
| 113 | Ga0207677_10029782 | 3300026023 | Bacteria | 3475 |
| 114 | Ga0207702_10182248 | 3300026078 | Bacteria | 1935 |
| 115 | Ga0207641_10257834 | 3300026088 | Bacteria | 1631 |
| 116 | Ga0207698_10088084 | 3300026142 | Bacteria | 2531 |
| 117 | Ga0209281_1000005 | 3300027111 | Bacteria | 1242284 |
| 118 | Ga0209970_1000566 | 3300027614 | Bacteria | 6407 |
| 119 | Ga0209974_10003757 | 3300027876 | Bacteria | 5436 |
| 120 | Ga0209974_10013418 | 3300027876 | Bacteria | 2728 |
| 121 | Ga0268265_10601233 | 3300028380 | Bacteria | 1051 |
| 122 | Ga0307515_10002945 | 3300028794 | Bacteria | 36101 |
| 123 | Ga0307515_10019085 | 3300028794 | Bacteria | 12369 |
| 124 | Ga0307515_10180167 | 3300028794 | Bacteria | 2066 |
| 125 | Ga0307515_10196517 | 3300028794 | Bacteria | 1907 |
| 126 | Ga0265332_10000525 | 3300031238 | Bacteria | 26033 |
| 127 | Ga0265325_10004553 | 3300031241 | Bacteria | 8733 |
| 128 | Ga0307513_10000019 | 3300031456 | Bacteria | 231194 |
| 129 | Ga0307513_10000051 | 3300031456 | Bacteria | 149733 |
| 130 | Ga0307513_10060088 | 3300031456 | Bacteria | 4031 |
| 131 | Ga0307408_100000048 | 3300031548 | Bacteria | 165579 |
| 132 | Ga0307408_100008638 | 3300031548 | Bacteria | 6726 |
| 133 | Ga0307408_100106316 | 3300031548 | Bacteria | 2147 |
| 134 | Ga0307408_100150376 | 3300031548 | Bacteria | 1837 |
| 135 | Ga0307514_10001099 | 3300031649 | Bacteria | 37817 |
| 136 | Ga0307516_10005195 | 3300031730 | Bacteria | 15673 |
| 137 | Ga0307406_10000164 | 3300031901 | Bacteria | 39993 |
| 138 | Ga0307406_10031285 | 3300031901 | Bacteria | 3239 |
| 139 | Ga0307416_100197583 | 3300032002 | Bacteria | 1904 |
| 140 | Ga0395899_0002121 | 3300037312 | Bacteria | 16299 |
| 141 | Ga0395899_0011694 | 3300037312 | Bacteria | 6718 |
| 142 | Ga0395900_0007193 | 3300037418 | Bacteria | 11537 |
| 143 | Ga0395900_0007605 | 3300037418 | Bacteria | 11193 |
| 144 | Ga0395900_0036558 | 3300037418 | Bacteria | 5062 |
| 145 | Ga0395900_0544293 | 3300037418 | Bacteria | 1106 |
| 146 | Ga0395900_0615929 | 3300037418 | Bacteria | 1025 |
| 147 | Ga0395898_0006216 | 3300037466 | Bacteria | 12791 |
| 148 | Ga0395898_0014015 | 3300037466 | Bacteria | 8239 |
| 149 | Ga0395898_0171668 | 3300037466 | Bacteria | 2073 |
| 150 | Ga0395905_0000148 | 3300037471 | Bacteria | 116301 |
| 151 | Ga0395905_0021676 | 3300037471 | Bacteria | 6077 |
| 152 | Ga0395905_0021683 | 3300037471 | Bacteria | 6076 |
| 153 | Ga0395905_0064015 | 3300037471 | Bacteria | 3440 |
| 154 | Ga0395905_0143549 | 3300037471 | Bacteria | 2246 |
| 155 | Ga0395905_0150954 | 3300037471 | Bacteria | 2186 |
| 156 | Ga0395905_0155174 | 3300037471 | Bacteria | 2153 |
| 157 | Ga0395901_0026125 | 3300038443 | Bacteria | 5994 |
| 158 | Ga0395901_0049836 | 3300038443 | Bacteria | 4352 |
| 159 | Ga0395901_0052049 | 3300038443 | Bacteria | 4257 |
| 160 | Ga0395901_0176954 | 3300038443 | Bacteria | 2238 |
| 161 | Ga0395901_0195741 | 3300038443 | Bacteria | 2119 |
| 162 | Ga0395901_0427476 | 3300038443 | Bacteria | 1357 |
| 163 | Ga0436361_0704832 | 3300039447 | Bacteria | 27869 |
| 164 | Ga0439465_0070738 | 3300041413 | Bacteria | 1169 |
| 165 | Ga0451802_1857790 | 3300041460 | Bacteria | 1403 |
| 166 | Ga0451835_0469364 | 3300041492 | Bacteria | 959 |
| 167 | Ga0451853_1586967 | 3300041512 | Bacteria | 1110 |
| 168 | Ga0450923_014460 | 3300042125 | Bacteria | 1465 |
| 169 | Ga0450898_005115 | 3300042134 | Bacteria | 1966 |
| 170 | Ga0439434_0020867 | 3300042435 | Bacteria | 1968 |
| 171 | Ga0439464_0087881 | 3300042439 | Bacteria | 934 |
| 172 | Ga0453683_0002845 | 3300044673 | Bacteria | 13126 |
| 173 | Ga0466966_0005638 | 3300044684 | Bacteria | 8235 |
| 174 | Ga0466961_0004376 | 3300044693 | Bacteria | 8847 |
| 175 | Ga0466963_0044632 | 3300044694 | Bacteria | 2918 |
| 176 | Ga0453684_0385756 | 3300044712 | Bacteria | 1572 |
| 177 | Ga0466970_0006211 | 3300044765 | Bacteria | 5959 |
| 178 | Ga0466959_0037741 | 3300045049 | Bacteria | 3570 |
| 179 | Ga0451576_0010119 | 3300045051 | Bacteria | 10860 |
| 180 | Ga0466958_0284221 | 3300045836 | Bacteria | 1061 |
| 181 | Ga0495642_0051555 | 3300046528 | Bacteria | 1693 |
| 182 | Ga0495654_0005706 | 3300046530 | Bacteria | 7177 |
| 183 | Ga0495597_0000065 | 3300046542 | Bacteria | 90745 |
| 184 | Ga0495656_0009868 | 3300046615 | Bacteria | 3450 |
| 185 | Ga0495659_0129361 | 3300046664 | Bacteria | 1000 |
| 186 | Ga0495685_059413 | 3300047447 | Bacteria | 1290 |
| 187 | Ga0496114_0062083 | 3300048917 | Bacteria | 3127 |
| 188 | Ga0496122_0008118 | 3300048925 | Bacteria | 11441 |
| 189 | Ga0496122_0109118 | 3300048925 | Bacteria | 1822 |
| 190 | Ga0496123_0003694 | 3300048926 | Bacteria | 16851 |
| 191 | Ga0496125_0000135 | 3300048928 | Bacteria | 160987 |
| 192 | Ga0496126_0038835 | 3300048929 | Bacteria | 4425 |
| 193 | Ga0501031_0000339 | 3300049568 | Bacteria | 27120 |
| 194 | Ga0501032_0264636 | 3300049569 | Bacteria | 1115 |
| 195 | Ga0501034_0472904 | 3300049571 | Bacteria | 1169 |
| 196 | Ga0501037_0068754 | 3300049573 | Bacteria | 2579 |
| 197 | Ga0501039_0501701 | 3300049575 | Bacteria | 953 |
| 198 | Ga0501047_0160809 | 3300049581 | Bacteria | 2117 |
| 199 | Ga0501047_0276974 | 3300049581 | Bacteria | 1523 |
| 200 | Ga0501223_002657 | 3300049663 | Bacteria | 3938 |
| 201 | Ga0501266_000063 | 3300049763 | Bacteria | 16114 |
| 202 | Ga0501044_0078884 | 3300049823 | Bacteria | 3337 |
| 203 | Ga0501044_0148463 | 3300049823 | Bacteria | 2328 |
| 204 | nmdc:mga03683_27022_c1 | 3300050489 | Bacteria | 2269 |
| 205 | nmdc:mga00v17_4693_c2 | 3300050491 | Bacteria | 4351 |
| 206 | nmdc:mga0yw44_110870_c1 | 3300050492 | Bacteria | 1758 |
| 207 | nmdc:mga0yw44_200671_c1 | 3300050492 | Bacteria | 1317 |
| 208 | nmdc:mga0k408_625_c1 | 3300050493 | Bacteria | 19481 |
| 209 | nmdc:mga04h51_90169_c1 | 3300050495 | Bacteria | 1102 |
| 210 | nmdc:mga09592_58056_c1 | 3300050508 | Bacteria | 3272 |
| 211 | Ga0500644_0001510 | 3300053088 | Bacteria | 6121 |
| 212 | Ga0500566_0119992 | 3300053094 | Bacteria | 1419 |
| 213 | Ga0500641_0022520 | 3300053096 | Bacteria | 2414 |
| 214 | Ga0500562_000526 | 3300053108 | Bacteria | 9300 |
| 215 | Ga0500593_000492 | 3300053117 | Bacteria | 15621 |
| 216 | Ga0500559_0219827 | 3300053136 | Bacteria | 896 |
| 217 | Ga0500590_013645 | 3300053148 | Bacteria | 4174 |
| 218 | Ga0500616_0020235 | 3300053153 | Bacteria | 3740 |
| 219 | Ga0500634_0157838 | 3300053161 | Bacteria | 1051 |
| 220 | Ga0500645_000200 | 3300053730 | Bacteria | 46278 |
| 221 | Ga0500645_007846 | 3300053730 | Bacteria | 3689 |
| 222 | Ga0500661_009721 | 3300055283 | Bacteria | 1757 |
| 223 | 2739244577 | 2738543012 | Bacteria | 7115078 |
| 224 | 2511245898 | 2511231002 | Bacteria | 5042903 |
| 225 | 2548500941 | 2547132374 | Bacteria | 5530232 |
| 226 | 2643865587 | 2643221570 | Bacteria | 5103772 |
| 227 | 2643993401 | 2643221596 | Bacteria | 5006805 |
| 228 | 2644062749 | 2643221609 | Bacteria | 6756331 |
| 229 | 2644076757 | 2643221611 | Bacteria | 6820941 |
| 230 | 2644294530 | 2643221652 | Bacteria | 5140275 |
| 231 | 2644646211 | 2643221717 | Bacteria | 5676132 |
| 232 | 2722884018 | 2721755523 | Bacteria | 6430384 |
| 233 | 2816475219 | 2816332133 | Bacteria | 7249298 |
| 234 | 2839140147 | 2839138175 | Bacteria | 6549354 |
| 235 | 2881101855 | 2881101125 | Bacteria | 4590519 |
| 236 | 2894025873 | 2894023352 | Bacteria | 5167372 |
| 237 | 2904480464 | 2904479285 | Bacteria | 5073931 |
| 238 | 2939635384 | 2939631187 | Bacteria | 6118131 |
| 239 | 2990712637 | 2990710928 | Bacteria | 5002431 |
| 240 | JGI25155J39150_1000002 | |||
| 241 | JGI25156J39149_1000003 | |||
| 242 | JGI25154J39366_1000009 | |||
| 243 | JGI25157J39369_1000002 | |||
| 244 | JGI25159J45721_1000296 | |||
| 245 | JGI25159J45721_1002909 | |||
| 246 | JGI25151J46595_10017790 | |||
| 247 | JGI25151J46595_10053898 | |||
| 248 | JGI25160J50197_1000123 | |||
| 249 | JGI25161J50226_1000032 | |||
| 250 | Ga0055526_1009645 | |||
| 251 | Ga0055526_1009664 | |||
| 252 | Ga0055537_1000079 | |||
| 253 | Ga0055537_1007570 | |||
| 254 | Ga0055524_1000012 | |||
| 255 | Ga0055536_1003008 | |||
| 256 | Ga0055534_1000670 | |||
| 257 | Ga0055534_1013265 | |||
| 258 | Ga0055528_1000563 | |||
| 259 | Ga0055530_10000218 | |||
| 260 | Ga0055540_1000012 | |||
| 261 | Ga0055540_1001678 | |||
| 262 | Ga0055531_10000612 | |||
| 263 | Ga0055531_10002045 | |||
| 264 | Ga0055543_1000405 | |||
| 265 | Ga0065165_1006669 | |||
| 266 | Ga0065165_1027677 | |||
| 267 | Ga0065704_10075962 | |||
| 268 | Ga0065704_10100536 | |||
| 269 | Ga0070670_100028414 | |||
| 270 | Ga0068869_100211126 | |||
| 271 | Ga0070680_100031123 | |||
| 272 | Ga0068868_100079653 | |||
| 273 | Ga0070660_100015382 | |||
| 274 | Ga0070681_10050144 | |||
| 275 | Ga0070681_10387329 | |||
| 276 | Ga0070679_100040883 | |||
| 277 | Ga0070679_100058637 | |||
| 278 | Ga0068852_100093461 | |||
| 279 | Ga0068862_100665324 | |||
| 280 | Ga0075365_10013429 | |||
| 281 | Ga0075365_10042540 | |||
| 282 | Ga0075365_10063007 | |||
| 283 | Ga0075368_10032013 | |||
| 284 | Ga0075363_100162254 | |||
| 285 | Ga0075364_10014593 | |||
| 286 | Ga0075362_10159465 | |||
| 287 | Ga0075367_10046810 | |||
| 288 | Ga0075366_10000575 | |||
| 289 | Ga0075370_10097399 | |||
| 290 | Ga0075370_10128729 | |||
| 291 | Ga0079104_1000011 | |||
| 292 | Ga0079104_1037945 | |||
| 293 | Ga0099826_10102800 | |||
| 294 | Ga0105250_10011084 | |||
| 295 | Ga0105240_10013394 | |||
| 296 | Ga0105245_10149326 | |||
| 297 | Ga0105243_10003099 | |||
| 298 | Ga0105243_11006427 | |||
| 299 | Ga0105241_10055708 | |||
| 300 | Ga0105242_10008338 | |||
| 301 | Ga0105239_10203920 | |||
| 302 | Ga0157376_10105291 | |||
| 303 | Ga0213872_10001418 | |||
| 304 | Ga0209435_100001 | |||
| 305 | Ga0207425_1003895 | |||
| 306 | Ga0209646_1000001 | |||
| 307 | Ga0209026_1000003 | |||
| 308 | Ga0209759_1000001 | |||
| 309 | Ga0209129_1014055 | |||
| 310 | Ga0209565_1000004 | |||
| 311 | Ga0209565_1001092 | |||
| 312 | Ga0209673_1000074 | |||
| 313 | Ga0209673_1041663 | |||
| 314 | Ga0209130_1000082 | |||
| 315 | Ga0209130_1000094 | |||
| 316 | Ga0209675_1000061 | |||
| 317 | Ga0209675_1002917 | |||
| 318 | Ga0209676_1000029 | |||
| 319 | Ga0209676_1008437 | |||
| 320 | Ga0209025_1003017 | |||
| 321 | Ga0209025_1004374 | |||
| 322 | Ga0209025_1005993 | |||
| 323 | Ga0209025_1022984 | |||
| 324 | Ga0209564_1000979 | |||
| 325 | Ga0209564_1001145 | |||
| 326 | Ga0209564_1026225 | |||
| 327 | Ga0209758_1013129 | |||
| 328 | Ga0209050_1000003 | |||
| 329 | Ga0209050_1014793 | |||
| 330 | Ga0209256_1000001 | |||
| 331 | Ga0209256_1022248 | |||
| 332 | Ga0207426_1000071 | |||
| 333 | Ga0207426_1004492 | |||
| 334 | Ga0209051_1000003 | |||
| 335 | Ga0209051_1000367 | |||
| 336 | Ga0209257_1000012 | |||
| 337 | Ga0209257_1000018 | |||
| 338 | Ga0207705_10239842 | |||
| 339 | Ga0207707_10054560 | |||
| 340 | Ga0207695_10060364 | |||
| 341 | Ga0207660_10072440 | |||
| 342 | Ga0207657_10005903 | |||
| 343 | Ga0207652_10092897 | |||
| 344 | Ga0207650_10334811 | |||
| 345 | Ga0207687_10022164 | |||
| 346 | Ga0207664_10206739 | |||
| 347 | Ga0207709_10000074 | |||
| 348 | Ga0207689_10279160 | |||
| 349 | Ga0207667_10069392 | |||
| 350 | Ga0207668_10507951 | |||
| 351 | Ga0207640_10345134 | |||
| 352 | Ga0207677_10029782 | |||
| 353 | Ga0207702_10182248 | |||
| 354 | Ga0207641_10257834 | |||
| 355 | Ga0207698_10088084 | |||
| 356 | Ga0209281_1000005 | |||
| 357 | Ga0209970_1000566 | |||
| 358 | Ga0209974_10003757 | |||
| 359 | Ga0209974_10013418 | |||
| 360 | Ga0268265_10601233 | |||
| 361 | Ga0307515_10002945 | |||
| 362 | Ga0307515_10019085 | |||
| 363 | Ga0307515_10180167 | |||
| 364 | Ga0307515_10196517 | |||
| 365 | Ga0265332_10000525 | |||
| 366 | Ga0265325_10004553 | |||
| 367 | Ga0307513_10000019 | |||
| 368 | Ga0307513_10000051 | |||
| 369 | Ga0307513_10060088 | |||
| 370 | Ga0307408_100000048 | |||
| 371 | Ga0307408_100008638 | |||
| 372 | Ga0307408_100106316 | |||
| 373 | Ga0307408_100150376 | |||
| 374 | Ga0307514_10001099 | |||
| 375 | Ga0307516_10005195 | |||
| 376 | Ga0307406_10000164 | |||
| 377 | Ga0307406_10031285 | |||
| 378 | Ga0307416_100197583 | |||
| 379 | Ga0395899_0002121 | |||
| 380 | Ga0395899_0011694 | |||
| 381 | Ga0395900_0007193 | |||
| 382 | Ga0395900_0007605 | |||
| 383 | Ga0395900_0036558 | |||
| 384 | Ga0395900_0544293 | |||
| 385 | Ga0395900_0615929 | |||
| 386 | Ga0395898_0006216 | |||
| 387 | Ga0395898_0014015 | |||
| 388 | Ga0395898_0171668 | |||
| 389 | Ga0395905_0000148 | |||
| 390 | Ga0395905_0021676 | |||
| 391 | Ga0395905_0021683 | |||
| 392 | Ga0395905_0064015 | |||
| 393 | Ga0395905_0143549 | |||
| 394 | Ga0395905_0150954 | |||
| 395 | Ga0395905_0155174 | |||
| 396 | Ga0395901_0026125 | |||
| 397 | Ga0395901_0049836 | |||
| 398 | Ga0395901_0052049 | |||
| 399 | Ga0395901_0176954 | |||
| 400 | Ga0395901_0195741 | |||
| 401 | Ga0395901_0427476 | |||
| 402 | Ga0436361_0704832 | |||
| 403 | Ga0439465_0070738 | |||
| 404 | Ga0451802_1857790 | |||
| 405 | Ga0451835_0469364 | |||
| 406 | Ga0451853_1586967 | |||
| 407 | Ga0450923_014460 | |||
| 408 | Ga0450898_005115 | |||
| 409 | Ga0439434_0020867 | |||
| 410 | Ga0439464_0087881 | |||
| 411 | Ga0453683_0002845 | |||
| 412 | Ga0466966_0005638 | |||
| 413 | Ga0466961_0004376 | |||
| 414 | Ga0466963_0044632 | |||
| 415 | Ga0453684_0385756 | |||
| 416 | Ga0466970_0006211 | |||
| 417 | Ga0466959_0037741 | |||
| 418 | Ga0451576_0010119 | |||
| 419 | Ga0466958_0284221 | |||
| 420 | Ga0495642_0051555 | |||
| 421 | Ga0495654_0005706 | |||
| 422 | Ga0495597_0000065 | |||
| 423 | Ga0495656_0009868 | |||
| 424 | Ga0495659_0129361 | |||
| 425 | Ga0495685_059413 | |||
| 426 | Ga0496114_0062083 | |||
| 427 | Ga0496122_0008118 | |||
| 428 | Ga0496122_0109118 | |||
| 429 | Ga0496123_0003694 | |||
| 430 | Ga0496125_0000135 | |||
| 431 | Ga0496126_0038835 | |||
| 432 | Ga0501031_0000339 | |||
| 433 | Ga0501032_0264636 | |||
| 434 | Ga0501034_0472904 | |||
| 435 | Ga0501037_0068754 | |||
| 436 | Ga0501039_0501701 | |||
| 437 | Ga0501047_0160809 | |||
| 438 | Ga0501047_0276974 | |||
| 439 | Ga0501223_002657 | |||
| 440 | Ga0501266_000063 | |||
| 441 | Ga0501044_0078884 | |||
| 442 | Ga0501044_0148463 | |||
| 443 | nmdc:mga03683_27022_c1 | |||
| 444 | nmdc:mga00v17_4693_c2 | |||
| 445 | nmdc:mga0yw44_110870_c1 | |||
| 446 | nmdc:mga0yw44_200671_c1 | |||
| 447 | nmdc:mga0k408_625_c1 | |||
| 448 | nmdc:mga04h51_90169_c1 | |||
| 449 | nmdc:mga09592_58056_c1 | |||
| 450 | Ga0500644_0001510 | |||
| 451 | Ga0500566_0119992 | |||
| 452 | Ga0500641_0022520 | |||
| 453 | Ga0500562_000526 | |||
| 454 | Ga0500593_000492 | |||
| 455 | Ga0500559_0219827 | |||
| 456 | Ga0500590_013645 | |||
| 457 | Ga0500616_0020235 | |||
| 458 | Ga0500634_0157838 | |||
| 459 | Ga0500645_000200 | |||
| 460 | Ga0500645_007846 | |||
| 461 | Ga0500661_009721 | |||
| 462 | 2739244577 | |||
| 463 | 2511245898 | |||
| 464 | 2548500941 | |||
| 465 | 2643865587 | |||
| 466 | 2643993401 | |||
| 467 | 2644062749 | |||
| 468 | 2644076757 | |||
| 469 | 2644294530 | |||
| 470 | 2644646211 | |||
| 471 | 2722884018 | |||
| 472 | 2816475219 | |||
| 473 | 2839140147 | |||
| 474 | 2881101855 | |||
| 475 | 2894025873 | |||
| 476 | 2904480464 | |||
| 477 | 2939635384 | |||
| 478 | 2990712637 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 4iv9-assembly1.cif.gz_B | structure of the flavoprotein tryptophan-2-monooxygenase | 0.9105 | 33 | 63 |
| 4rdi-assembly2.cif.gz_D | crystal structure of e. coli trna n6-threonylcarbamoyladenosine dehydratase, tcda | 0.9091 | 10 | 257 |
| 4d79-assembly1.cif.gz_A | crystal structure of e. coli trna n6-threonylcarbamoyladenosine dehydratase, tcda, in complex with atp at 1.768 angstroem resolution | 0.9076 | 8 | 257 |
| 4rdh-assembly2.cif.gz_D | crystal structure of e. coli trna n6-threonylcarbamoyladenosine dehydratase, tcda | 0.8995 | 8 | 257 |
| 4yed-assembly1.cif.gz_A | tcda (csdl) | 0.8977 | 8 | 257 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 4d7aB00 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.8867 | 8 | 257 | 3.40.50.720 |
| af_Q4DMC9_3_252_3.40.50.720 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.8859 | 9 | 258 | 3.40.50.720 |
| af_Q54LX4_3_401_3.50.50.60 | Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain | 0.8774 | 35 | 67 | 3.50.50.60 |
| af_A4I9A5_15_390_3.40.50.720 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.8736 | 12 | 110 | 3.40.50.720 |
| af_Q2FXU7_1_252_3.40.50.720 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.8735 | 15 | 258 | 3.40.50.720 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-C9Y651-F1-model_v4 | Uncharacterized protein ygdL | 0.9381 | 10 | 259 |
GO:0008641
GO:0061503 GO:0061504 |
| AF-A0A7X8DDJ5-F1-model_v4 | tRNA threonylcarbamoyladenosine dehydratase | 0.9211 | 16 | 258 |
GO:0008641
GO:0061503 GO:0061504 |
| AF-A0A090I126-F1-model_v4 | tRNA A37 threonylcarbamoyladenosine dehydratase | 0.9209 | 15 | 258 |
GO:0008641
GO:0061503 GO:0061504 |
| AF-T1BH36-F1-model_v4 | Molybdopterin biosynthesis protein | 0.9206 | 133 | 257 |
GO:0008641
GO:0061503 GO:0061504 |
| AF-A0A806R5R5-F1-model_v4 | deleted | 0.9196 | 12 | 195 |
|