F349085

General Info

Members Datasets Scaffolds Average Seq Length
236 187 236 155

Family's Representative Sequence

Representative Sequence 3300013105|Ga0157369_10082604|Ga0157369_100826043
Length 180
Sequence MMLFPAICHNQVRHFVMWVEANYMEPRIDYSKAPAGALQAMQGLEGYVRKSGLEHSLLELIKTRASQLNGCAYCIDMHTKDARAQGETEQRLYALSAWRETPFFSDRERAALEWTESLTLISENHVPDDVYERVRPHFSEAELINLTLAVVAINGWNRIAISLRAVPGTYQAKASTAAQS

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
3 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
4 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
5 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
6 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
7 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
8 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
9 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
10 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
11 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
12 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
13 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
14 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
15 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
16 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
17 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
18 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
19 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
20 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
21 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
22 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
23 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
24 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
25 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
26 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
27 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
28 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
29 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
30 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
31 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
32 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
33 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
34 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
35 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
36 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
37 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
38 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
39 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
40 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
41 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
42 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
43 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
44 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
45 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
46 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
47 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
48 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
49 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
50 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
51 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
52 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
54 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
55 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
57 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
58 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
59 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
60 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
61 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
62 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
63 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
64 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
65 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
66 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
67 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
68 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
69 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
70 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
71 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
72 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
73 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
74 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
75 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
78 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
79 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
81 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
82 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
83 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
84 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
85 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
109 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
110 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
112 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
113 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
114 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
115 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
116 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
117 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
118 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
119 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
120 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
121 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
122 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
123 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
124 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
125 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
126 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
127 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
128 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
129 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
130 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
131 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
132 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
133 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
134 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
135 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
136 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
137 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
138 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
139 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
140 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
141 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
142 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
143 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
144 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
145 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
146 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
147 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
148 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
149 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
150 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
151 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
152 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
153 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
154 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
155 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
156 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
157 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
158 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
159 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
160 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
161 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
162 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
163 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
164 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
165 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
166 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
167 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
168 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
169 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
170 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
173 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
174 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
175 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
176 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
177 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
178 3300049769 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_B_4_drought Metagenome Rhizosphere
179 3300049774 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A25_A_5_drought Metagenome Rhizosphere
180 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
181 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
182 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
183 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
184 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
185 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
186 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
187 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.46
Metatranscriptomes 2.54
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.32
Nodule 0
Rhizoplane 2.54
Rhizosphere 82.2
Stem 0
Stem Tuber 0
Unclassified 5.93

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_2117967 2162886007 Bacteria 1271
2 JGI24751J29686_10004214 3300002459 Bacteria 2919
3 JGI25162J39368_1000048 3300002737 Bacteria 159652
4 JGI25154J39366_1012882 3300002738 Bacteria 910
5 JGI25157J39369_1000219 3300002741 Bacteria 46921
6 JGI25163J39215_1000777 3300002771 Bacteria 7830
7 JGI25164J39214_1000151 3300002772 Bacteria 65800
8 JGI25165J46597_1000009 3300003214 Bacteria 467965
9 Ga0055538_1000547 3300003751 Bacteria 13106
10 Ga0055535_1000016 3300003761 Bacteria 252398
11 Ga0055535_1000048 3300003761 Bacteria 139301
12 Ga0055542_1000045 3300003762 Bacteria 203558
13 Ga0055529_1000020 3300003763 Bacteria 324857
14 Ga0065704_10127341 3300005289 Bacteria 1670
15 Ga0065707_10024896 3300005295 Bacteria 1247
16 Ga0065707_10340966 3300005295 Bacteria 933
17 Ga0070683_100151739 3300005329 Unclassified 2197
18 Ga0070680_101628648 3300005336 Bacteria 559
19 Ga0070682_100176356 3300005337 Bacteria 1489
20 Ga0070689_100699979 3300005340 Bacteria 885
21 Ga0070692_10254726 3300005345 Bacteria 1052
22 Ga0070692_10443358 3300005345 Unclassified 829
23 Ga0070669_101026508 3300005353 Bacteria 708
24 Ga0070709_10084470 3300005434 Bacteria 2079
25 Ga0070713_100065947 3300005436 Bacteria 3043
26 Ga0070711_100184056 3300005439 Bacteria 1601
27 Ga0070711_100689826 3300005439 Bacteria 859
28 Ga0070705_100656309 3300005440 Bacteria 819
29 Ga0070700_100105333 3300005441 Unclassified 1865
30 Ga0070708_100131170 3300005445 Bacteria 2319
31 Ga0070708_100220486 3300005445 Bacteria 1779
32 Ga0070708_100244379 3300005445 Bacteria 1685
33 Ga0070681_10036050 3300005458 Unclassified 4969
34 Ga0070707_100071911 3300005468 Bacteria 3332
35 Ga0070707_100242347 3300005468 Bacteria 1755
36 Ga0070698_100004472 3300005471 Bacteria 15368
37 Ga0070699_100246997 3300005518 Bacteria 1594
38 Ga0070699_101452605 3300005518 Bacteria 629
39 Ga0070699_101803435 3300005518 Bacteria 560
40 Ga0070679_100104099 3300005530 Unclassified 2825
41 Ga0070684_100185886 3300005535 Bacteria 1890
42 Ga0070697_100192526 3300005536 Bacteria 1731
43 Ga0070697_100738597 3300005536 Bacteria 869
44 Ga0070695_100052950 3300005545 Unclassified 2610
45 Ga0070696_100377116 3300005546 Bacteria 1104
46 Ga0070696_101692527 3300005546 Bacteria 545
47 Ga0070665_100159321 3300005548 Bacteria 2259
48 Ga0070665_100162107 3300005548 Bacteria 2238
49 Ga0070704_100653111 3300005549 Bacteria 929
50 Ga0068857_100387883 3300005577 Bacteria 1298
51 Ga0068857_101392594 3300005577 Bacteria 682
52 Ga0068859_100914670 3300005617 Bacteria 962
53 Ga0068864_100043924 3300005618 Bacteria 3827
54 Ga0068861_100013985 3300005719 Bacteria 5626
55 Ga0068863_101477113 3300005841 Bacteria 688
56 Ga0081538_10118203 3300005981 Bacteria 1281
57 Ga0081539_10003158 3300005985 Bacteria 20902
58 Ga0075364_10059923 3300006051 Bacteria 2496
59 Ga0070716_100025831 3300006173 Bacteria 3139
60 Ga0070716_100035134 3300006173 Bacteria 2754
61 Ga0070716_100318138 3300006173 Bacteria 1089
62 Ga0070712_100004652 3300006175 Bacteria 8486
63 Ga0075367_10225809 3300006178 Bacteria 1172
64 Ga0075366_10034079 3300006195 Bacteria 3000
65 Ga0075431_100009807 3300006847 Bacteria 9616
66 Ga0075431_100417713 3300006847 Bacteria 1341
67 Ga0068865_101462012 3300006881 Bacteria 611
68 Ga0097620_100914641 3300006931 Bacteria 962
69 Ga0099795_10075500 3300007788 Bacteria 1280
70 Ga0105240_11823010 3300009093 Bacteria 634
71 Ga0111539_10005740 3300009094 Bacteria 16051
72 Ga0105243_10467567 3300009148 Bacteria 1187
73 Ga0105243_11659718 3300009148 Bacteria 667
74 Ga0105241_10586125 3300009174 Bacteria 1006
75 Ga0105248_10543868 3300009177 Bacteria 1310
76 Ga0105249_13016878 3300009553 Bacteria 541
77 Ga0105239_11055972 3300010375 Bacteria 935
78 Ga0157373_10330192 3300013100 Bacteria 1086
79 Ga0157373_10707701 3300013100 Bacteria 738
80 Ga0157370_10116876 3300013104 Unclassified 2492
81 Ga0157369_10082604 3300013105 Bacteria 3437
82 Ga0157369_10218631 3300013105 Bacteria 1995
83 Ga0163162_10519839 3300013306 Bacteria 1320
84 Ga0163162_10692133 3300013306 Bacteria 1141
85 Ga0163162_11043375 3300013306 Bacteria 925
86 Ga0163163_10017028 3300014325 Bacteria 6769
87 Ga0163163_10102159 3300014325 Bacteria 2890
88 Ga0163163_10660586 3300014325 Bacteria 1109
89 Ga0157380_10483642 3300014326 Bacteria 1198
90 Ga0157376_11085112 3300014969 Bacteria 826
91 Ga0197907_10257589 3300020069 Bacteria 735
92 Ga0206349_1189453 3300020075 Bacteria 645
93 Ga0206354_11319931 3300020081 Bacteria 679
94 Ga0206353_11049570 3300020082 Bacteria 777
95 Ga0224712_10027293 3300022467 Bacteria 2030
96 Ga0224712_10366020 3300022467 Bacteria 683
97 Ga0209435_112274 3300025206 Bacteria 918
98 Ga0209760_100223 3300025207 Bacteria 24734
99 Ga0209784_100013 3300025224 Bacteria 518664
100 Ga0209672_102860 3300025228 Bacteria 3892
101 Ga0209672_105173 3300025228 Bacteria 2279
102 Ga0207427_100030 3300025231 Bacteria 358045
103 Ga0209437_100012 3300025233 Bacteria 792625
104 Ga0209258_100019 3300025242 Bacteria 566728
105 Ga0209646_1000521 3300025246 Bacteria 17059
106 Ga0209026_1000015 3300025250 Bacteria 395555
107 Ga0209148_1000001 3300025254 Bacteria 2545271
108 Ga0209759_1000425 3300025256 Bacteria 51338
109 Ga0209233_1000002 3300025261 Bacteria 2501366
110 Ga0209455_1000027 3300025272 Bacteria 566710
111 Ga0207699_10029443 3300025906 Bacteria 3063
112 Ga0207699_10054548 3300025906 Bacteria 2375
113 Ga0207684_10101997 3300025910 Bacteria 2453
114 Ga0207684_10671989 3300025910 Bacteria 882
115 Ga0207654_10144563 3300025911 Bacteria 1520
116 Ga0207654_11021973 3300025911 Unclassified 601
117 Ga0207707_10340749 3300025912 Bacteria 1292
118 Ga0207695_10681904 3300025913 Bacteria 908
119 Ga0207693_10082320 3300025915 Bacteria 2520
120 Ga0207693_10220633 3300025915 Bacteria 1490
121 Ga0207652_10276268 3300025921 Bacteria 1515
122 Ga0207646_10000313 3300025922 Bacteria 65784
123 Ga0207646_10238751 3300025922 Bacteria 1642
124 Ga0207650_10510160 3300025925 Bacteria 1005
125 Ga0207700_10068936 3300025928 Bacteria 2713
126 Ga0207686_10256314 3300025934 Bacteria 1280
127 Ga0207670_10586819 3300025936 Bacteria 914
128 Ga0207665_10030972 3300025939 Bacteria 3539
129 Ga0207665_10063963 3300025939 Bacteria 2499
130 Ga0207665_10190596 3300025939 Bacteria 1489
131 Ga0207711_10043760 3300025941 Bacteria 3821
132 Ga0207711_10435192 3300025941 Bacteria 1221
133 Ga0207689_10003124 3300025942 Bacteria 15196
134 Ga0207689_10003299 3300025942 Bacteria 14777
135 Ga0207661_10029037 3300025944 Unclassified 4244
136 Ga0207658_10072496 3300025986 Bacteria 2611
137 Ga0207678_10892970 3300026067 Unclassified 786
138 Ga0207708_10228946 3300026075 Bacteria 1492
139 Ga0207676_10042369 3300026095 Bacteria 3501
140 Ga0207674_10843120 3300026116 Bacteria 884
141 Ga0207675_100106278 3300026118 Unclassified 2646
142 Ga0207675_100716596 3300026118 Bacteria 1010
143 Ga0209974_10329617 3300027876 Bacteria 589
144 Ga0207428_10064860 3300027907 Bacteria 2883
145 Ga0268266_10138538 3300028379 Bacteria 2182
146 Ga0268266_10147331 3300028379 Bacteria 2118
147 Ga0265338_10004094 3300028800 Bacteria 19971
148 Ga0307513_10120667 3300031456 Bacteria 2590
149 Ga0307408_100028139 3300031548 Bacteria 3881
150 Ga0307413_10274166 3300031824 Bacteria 1265
151 Ga0307407_10625158 3300031903 Bacteria 804
152 Ga0307409_100572935 3300031995 Bacteria 1112
153 Ga0307409_101680961 3300031995 Bacteria 663
154 Ga0307414_10439161 3300032004 Bacteria 1142
155 Ga0307414_10859366 3300032004 Bacteria 830
156 Ga0307411_10048665 3300032005 Bacteria 2749
157 Ga0307415_100043348 3300032126 Bacteria 3002
158 Ga0373955_0829869 3300035172 Bacteria 568
159 Ga0373927_0030153 3300035695 Bacteria 3540
160 Ga0373933_0000036 3300035724 Bacteria 81168
161 Ga0373937_0000001 3300036401 Bacteria 478903
162 Ga0395900_0327896 3300037418 Bacteria 1509
163 Ga0395898_0783376 3300037466 Bacteria 894
164 Ga0395898_1307254 3300037466 Bacteria 654
165 Ga0395905_0013744 3300037471 Bacteria 7749
166 Ga0436360_0602601 3300039438 Bacteria 647
167 Ga0439439_0077753 3300041406 Bacteria 894
168 Ga0451841_0975001 3300041498 Bacteria 1556
169 Ga0451849_0084450 3300041505 Bacteria 3212
170 Ga0451853_0915330 3300041512 Bacteria 2692
171 Ga0439455_0173227 3300042012 Bacteria 620
172 Ga0450896_018653 3300042133 Bacteria 1007
173 Ga0450906_033567 3300042145 Bacteria 907
174 Ga0453683_0257137 3300044673 Bacteria 1114
175 Ga0451576_1006974 3300045051 Bacteria 873
176 Ga0466967_1269435 3300045976 Bacteria 734
177 Ga0495651_0043175 3300046462 Bacteria 3498
178 Ga0495653_0235776 3300046463 Bacteria 1222
179 Ga0495662_0215147 3300046476 Bacteria 947
180 Ga0495607_0079461 3300046501 Bacteria 1807
181 Ga0495628_0014825 3300046516 Bacteria 6520
182 Ga0495628_0080057 3300046516 Bacteria 2540
183 Ga0495652_0005174 3300046529 Bacteria 12330
184 Ga0495652_0005602 3300046529 Bacteria 11786
185 Ga0495587_0000253 3300046536 Bacteria 38702
186 Ga0495609_0291322 3300046538 Bacteria 666
187 Ga0495645_0017232 3300046543 Bacteria 5174
188 Ga0495633_0001453 3300046558 Bacteria 18386
189 Ga0495656_0067176 3300046615 Bacteria 1582
190 Ga0495611_0385349 3300046648 Bacteria 641
191 Ga0495659_0003078 3300046664 Bacteria 5356
192 Ga0495623_0002181 3300046679 Bacteria 13052
193 Ga0495646_0002246 3300046680 Bacteria 11800
194 Ga0495624_0027051 3300046690 Bacteria 3758
195 Ga0495649_0081628 3300046694 Bacteria 1728
196 Ga0495589_0015598 3300046794 Bacteria 3906
197 Ga0495604_0041748 3300047317 Bacteria 3597
198 Ga0495674_0673768 3300047319 Bacteria 814
199 Ga0495675_0000319 3300047444 Bacteria 34255
200 Ga0495685_133724 3300047447 Bacteria 810
201 Ga0495681_0067086 3300047470 Bacteria 1636
202 Ga0495686_0000012 3300047472 Bacteria 508428
203 Ga0495686_0033398 3300047472 Bacteria 3322
204 Ga0495602_0000448 3300048088 Bacteria 38588
205 Ga0495602_0142346 3300048088 Bacteria 1897
206 Ga0496104_0234996 3300048907 Bacteria 1745
207 Ga0496104_1154355 3300048907 Bacteria 678
208 Ga0496105_0394702 3300048908 Bacteria 1099
209 Ga0496107_0892435 3300048910 Bacteria 648
210 Ga0496115_0006639 3300048918 Bacteria 8489
211 Ga0496115_0803732 3300048918 Bacteria 732
212 Ga0496118_0025967 3300048921 Bacteria 5006
213 Ga0496121_0247254 3300048924 Bacteria 1239
214 Ga0496121_0296494 3300048924 Bacteria 1099
215 Ga0496126_0263988 3300048929 Bacteria 1431
216 Ga0501038_0456483 3300049574 Bacteria 982
217 Ga0501047_0018507 3300049581 Bacteria 6681
218 Ga0501047_0086399 3300049581 Bacteria 3014
219 Ga0501069_0565289 3300049585 Bacteria 681
220 Ga0501077_0228827 3300049593 Bacteria 1182
221 Ga0501259_026475 3300049688 Bacteria 1068
222 Ga0501221_099067 3300049704 Bacteria 721
223 Ga0501080_0234234 3300049742 Bacteria 1678
224 Ga0501083_0324499 3300049744 Bacteria 1001
225 Ga0501272_038363 3300049769 Bacteria 632
226 Ga0501278_033121 3300049774 Bacteria 533
227 Ga0501035_0095958 3300049822 Bacteria 2606
228 Ga0501044_0000895 3300049823 Bacteria 36008
229 Ga0501044_0001821 3300049823 Bacteria 24825
230 Ga0501045_0007646 3300049824 Bacteria 7515
231 nmdc:mga06r32_326241_c1 3300050510 Bacteria 1520
232 nmdc:mga06r32_8179_c1 3300050510 Bacteria 9412
233 nmdc:mga08y16_122198_c1 3300050511 Bacteria 2710
234 Ga0590071_002540 3300059421 Bacteria 4591
235 Ga0590075_001985 3300059424 Bacteria 4944
236 Ga0590077_000295 3300059426 Bacteria 14132

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300002737 JGI25162J39368_1000048 JGI25162J39368_100004869 145
2 3300002738 JGI25154J39366_1012882 JGI25154J39366_10128821 145
3 3300002741 JGI25157J39369_1000219 JGI25157J39369_100021917 145
4 3300002771 JGI25163J39215_1000777 JGI25163J39215_10007775 145
5 3300002772 JGI25164J39214_1000151 JGI25164J39214_100015117 145
6 3300003214 JGI25165J46597_1000009 JGI25165J46597_1000009266 145
7 3300003751 Ga0055538_1000547 Ga0055538_10005476 145
8 3300003761 Ga0055535_1000016 Ga0055535_1000016119 145
9 3300003761 Ga0055535_1000048 Ga0055535_10000488 145
10 3300003762 Ga0055542_1000045 Ga0055542_100004568 145
11 3300003763 Ga0055529_1000020 Ga0055529_100002082 145
12 3300009177 Ga0105248_10543868 Ga0105248_105438682 145
13 3300013306 Ga0163162_10519839 Ga0163162_105198392 145
14 3300013306 Ga0163162_10692133 Ga0163162_106921332 145
15 3300014969 Ga0157376_11085112 Ga0157376_110851121 145
16 3300025206 Ga0209435_112274 Ga0209435_1122741 145
17 3300025207 Ga0209760_100223 Ga0209760_10022320 145
18 3300025224 Ga0209784_100013 Ga0209784_100013234 145
19 3300025228 Ga0209672_102860 Ga0209672_1028602 145
20 3300025228 Ga0209672_105173 Ga0209672_1051732 145
21 3300025231 Ga0207427_100030 Ga0207427_10003035 145
22 3300025233 Ga0209437_100012 Ga0209437_100012485 145
23 3300025242 Ga0209258_100019 Ga0209258_100019303 145
24 3300025246 Ga0209646_1000521 Ga0209646_100052117 145
25 3300025250 Ga0209026_1000015 Ga0209026_1000015129 145
26 3300025254 Ga0209148_1000001 Ga0209148_10000011996 145
27 3300025256 Ga0209759_1000425 Ga0209759_100042518 145
28 3300025261 Ga0209233_1000002 Ga0209233_1000002304 145
29 3300025272 Ga0209455_1000027 Ga0209455_1000027242 145
30 3300025941 Ga0207711_10043760 Ga0207711_100437601 145
31 3300025941 Ga0207711_10435192 Ga0207711_104351922 145
32 3300028800 Ga0265338_10004094 Ga0265338_1000409414 145
33 3300037418 Ga0395900_0327896 Ga0395900_0327896_329_766 145
34 3300037466 Ga0395898_0783376 Ga0395898_0783376_178_615 145
35 3300037471 Ga0395905_0013744 Ga0395905_0013744_2413_2850 145
36 3300045976 Ga0466967_1269435 Ga0466967_1269435_42_479 145
37 3300046476 Ga0495662_0215147 Ga0495662_0215147_16_453 145
38 3300046516 Ga0495628_0014825 Ga0495628_0014825_3729_4166 145
39 3300046516 Ga0495628_0080057 Ga0495628_0080057_1585_2022 145
40 3300046529 Ga0495652_0005174 Ga0495652_0005174_10565_11002 145
41 3300046543 Ga0495645_0017232 Ga0495645_0017232_1155_1592 145
42 3300046558 Ga0495633_0001453 Ga0495633_0001453_3168_3617 145
43 3300046680 Ga0495646_0002246 Ga0495646_0002246_4979_5416 145
44 3300046690 Ga0495624_0027051 Ga0495624_0027051_2975_3412 145
45 3300046694 Ga0495649_0081628 Ga0495649_0081628_41_478 145
46 3300046794 Ga0495589_0015598 Ga0495589_0015598_2555_2992 145
47 3300047472 Ga0495686_0000012 Ga0495686_0000012_330745_331182 145
48 3300047472 Ga0495686_0033398 Ga0495686_0033398_1851_2288 145
49 3300048088 Ga0495602_0142346 Ga0495602_0142346_319_756 145
50 3300048907 Ga0496104_1154355 Ga0496104_1154355_136_573 145
51 3300048908 Ga0496105_0394702 Ga0496105_0394702_595_1032 145
52 3300048921 Ga0496118_0025967 Ga0496118_0025967_1215_1652 145
53 3300048924 Ga0496121_0247254 Ga0496121_0247254_658_1095 145
54 3300048924 Ga0496121_0296494 Ga0496121_0296494_106_543 145
55 3300048929 Ga0496126_0263988 Ga0496126_0263988_178_615 145
56 3300041498 Ga0451841_0975001 Ga0451841_0975001_229_672 147
57 3300041505 Ga0451849_0084450 Ga0451849_0084450_447_890 147
58 3300041512 Ga0451853_0915330 Ga0451853_0915330_986_1429 147
59 3300046615 Ga0495656_0067176 Ga0495656_0067176_1046_1495 149
60 3300046648 Ga0495611_0385349 Ga0495611_0385349_181_630 149
61 3300046664 Ga0495659_0003078 Ga0495659_0003078_1389_1838 149
62 3300047447 Ga0495685_133724 Ga0495685_133724_138_587 149
63 3300047470 Ga0495681_0067086 Ga0495681_0067086_293_742 149
64 3300005618 Ga0068864_100043924 Ga0068864_1000439243 152
65 3300010375 Ga0105239_11055972 Ga0105239_110559721 152
66 3300046501 Ga0495607_0079461 Ga0495607_0079461_978_1439 153
67 3300046538 Ga0495609_0291322 Ga0495609_0291322_185_646 153
68 3300005336 Ga0070680_101628648 Ga0070680_1016286481 154
69 3300005353 Ga0070669_101026508 Ga0070669_1010265081 154
70 3300005548 Ga0070665_100159321 Ga0070665_1001593213 154
71 3300005981 Ga0081538_10118203 Ga0081538_101182031 154
72 3300005985 Ga0081539_10003158 Ga0081539_100031588 154
73 3300025986 Ga0207658_10072496 Ga0207658_100724962 154
74 3300028379 Ga0268266_10138538 Ga0268266_101385382 154
75 3300041406 Ga0439439_0077753 Ga0439439_0077753_208_675 154
76 3300059421 Ga0590071_002540 Ga0590071_002540_145_612 154
77 3300059424 Ga0590075_001985 Ga0590075_001985_2750_3217 154
78 3300059426 Ga0590077_000295 Ga0590077_000295_10180_10647 154
79 3300005548 Ga0070665_100162107 Ga0070665_1001621073 155
80 3300006847 Ga0075431_100417713 Ga0075431_1004177132 155
81 3300006881 Ga0068865_101462012 Ga0068865_1014620121 155
82 3300009174 Ga0105241_10586125 Ga0105241_105861251 155
83 3300009553 Ga0105249_13016878 Ga0105249_130168781 155
84 3300025911 Ga0207654_10144563 Ga0207654_101445632 155
85 3300025913 Ga0207695_10681904 Ga0207695_106819041 155
86 3300028379 Ga0268266_10147331 Ga0268266_101473312 155
87 3300031995 Ga0307409_101680961 Ga0307409_1016809611 155
88 3300032004 Ga0307414_10859366 Ga0307414_108593661 155
89 3300049585 Ga0501069_0565289 Ga0501069_0565289_99_569 155
90 3300049769 Ga0501272_038363 Ga0501272_038363_41_511 155
91 3300049822 Ga0501035_0095958 Ga0501035_0095958_1751_2221 155
92 3300049823 Ga0501044_0000895 Ga0501044_0000895_8271_8741 155
93 3300049824 Ga0501045_0007646 Ga0501045_0007646_6922_7389 155
94 3300050510 nmdc:mga06r32_326241_c1 nmdc:mga06r32_326241_c1_798_1268 155
95 3300005329 Ga0070683_100151739 Ga0070683_1001517393 156
96 3300005445 Ga0070708_100220486 Ga0070708_1002204862 156
97 3300005445 Ga0070708_100244379 Ga0070708_1002443792 156
98 3300005458 Ga0070681_10036050 Ga0070681_100360504 156
99 3300005468 Ga0070707_100071911 Ga0070707_1000719114 156
100 3300005468 Ga0070707_100242347 Ga0070707_1002423471 156
101 3300005518 Ga0070699_100246997 Ga0070699_1002469972 156
102 3300005530 Ga0070679_100104099 Ga0070679_1001040992 156
103 3300005536 Ga0070697_100192526 Ga0070697_1001925262 156
104 3300005536 Ga0070697_100738597 Ga0070697_1007385971 156
105 3300005577 Ga0068857_100387883 Ga0068857_1003878832 156
106 3300009093 Ga0105240_11823010 Ga0105240_118230101 156
107 3300013104 Ga0157370_10116876 Ga0157370_101168763 156
108 3300013105 Ga0157369_10082604 Ga0157369_100826043 156
109 3300020075 Ga0206349_1189453 Ga0206349_11894531 156
110 3300020081 Ga0206354_11319931 Ga0206354_113199311 156
111 3300025910 Ga0207684_10101997 Ga0207684_101019972 156
112 3300025910 Ga0207684_10671989 Ga0207684_106719892 156
113 3300025912 Ga0207707_10340749 Ga0207707_103407492 156
114 3300025921 Ga0207652_10276268 Ga0207652_102762682 156
115 3300025922 Ga0207646_10000313 Ga0207646_1000031361 156
116 3300025944 Ga0207661_10029037 Ga0207661_100290374 156
117 3300026067 Ga0207678_10892970 Ga0207678_108929701 156
118 3300037466 Ga0395898_1307254 Ga0395898_1307254_129_602 156
119 3300049581 Ga0501047_0086399 Ga0501047_0086399_37_507 156
120 3300005434 Ga0070709_10084470 Ga0070709_100844703 157
121 3300005439 Ga0070711_100689826 Ga0070711_1006898262 157
122 3300005518 Ga0070699_101452605 Ga0070699_1014526051 157
123 3300005518 Ga0070699_101803435 Ga0070699_1018034351 157
124 3300005546 Ga0070696_101692527 Ga0070696_1016925271 157
125 3300006173 Ga0070716_100025831 Ga0070716_1000258314 157
126 3300006173 Ga0070716_100035134 Ga0070716_1000351344 157
127 3300007788 Ga0099795_10075500 Ga0099795_100755001 157
128 3300013100 Ga0157373_10707701 Ga0157373_107077011 157
129 3300025906 Ga0207699_10029443 Ga0207699_100294431 157
130 3300025906 Ga0207699_10054548 Ga0207699_100545482 157
131 3300025915 Ga0207693_10082320 Ga0207693_100823203 157
132 3300025922 Ga0207646_10238751 Ga0207646_102387512 157
133 3300025928 Ga0207700_10068936 Ga0207700_100689362 157
134 3300025939 Ga0207665_10063963 Ga0207665_100639634 157
135 3300025939 Ga0207665_10190596 Ga0207665_101905962 157
136 3300026118 Ga0207675_100716596 Ga0207675_1007165962 157
137 3300027876 Ga0209974_10329617 Ga0209974_103296171 157
138 3300035695 Ga0373927_0030153 Ga0373927_0030153_1507_1992 157
139 3300044673 Ga0453683_0257137 Ga0453683_0257137_417_1055 157
140 3300048907 Ga0496104_0234996 Ga0496104_0234996_1187_1660 157
141 3300048910 Ga0496107_0892435 Ga0496107_0892435_127_600 157
142 3300048918 Ga0496115_0006639 Ga0496115_0006639_2816_3289 157
143 3300005337 Ga0070682_100176356 Ga0070682_1001763562 158
144 3300005345 Ga0070692_10254726 Ga0070692_102547262 158
145 3300005436 Ga0070713_100065947 Ga0070713_1000659472 158
146 3300005439 Ga0070711_100184056 Ga0070711_1001840561 158
147 3300005535 Ga0070684_100185886 Ga0070684_1001858862 158
148 3300006051 Ga0075364_10059923 Ga0075364_100599233 158
149 3300006173 Ga0070716_100318138 Ga0070716_1003181383 158
150 3300006175 Ga0070712_100004652 Ga0070712_1000046527 158
151 3300006178 Ga0075367_10225809 Ga0075367_102258092 158
152 3300006195 Ga0075366_10034079 Ga0075366_100340795 158
153 3300009094 Ga0111539_10005740 Ga0111539_100057408 158
154 3300013105 Ga0157369_10218631 Ga0157369_102186313 158
155 3300020069 Ga0197907_10257589 Ga0197907_102575891 158
156 3300020082 Ga0206353_11049570 Ga0206353_110495702 158
157 3300022467 Ga0224712_10027293 Ga0224712_100272932 158
158 3300022467 Ga0224712_10366020 Ga0224712_103660201 158
159 3300025915 Ga0207693_10220633 Ga0207693_102206332 158
160 3300025939 Ga0207665_10030972 Ga0207665_100309723 158
161 3300027907 Ga0207428_10064860 Ga0207428_100648604 158
162 3300035172 Ga0373955_0829869 Ga0373955_0829869_10_486 158
163 3300035724 Ga0373933_0000036 Ga0373933_0000036_69541_70017 158
164 3300036401 Ga0373937_0000001 Ga0373937_0000001_76474_76950 158
165 3300039438 Ga0436360_0602601 Ga0436360_0602601_77_553 158
166 3300046462 Ga0495651_0043175 Ga0495651_0043175_651_1127 158
167 3300046463 Ga0495653_0235776 Ga0495653_0235776_37_513 158
168 3300046529 Ga0495652_0005602 Ga0495652_0005602_6634_7110 158
169 3300046536 Ga0495587_0000253 Ga0495587_0000253_37201_37677 158
170 3300046679 Ga0495623_0002181 Ga0495623_0002181_6907_7383 158
171 3300047317 Ga0495604_0041748 Ga0495604_0041748_897_1373 158
172 3300047319 Ga0495674_0673768 Ga0495674_0673768_201_677 158
173 3300047444 Ga0495675_0000319 Ga0495675_0000319_31111_31587 158
174 3300048088 Ga0495602_0000448 Ga0495602_0000448_4681_5157 158
175 3300050511 nmdc:mga08y16_122198_c1 nmdc:mga08y16_122198_c1_394_870 158
176 2162886007 SwRhRL2b_contig_2117967 SwRhRL2b_0714.00005400 159
177 3300002459 JGI24751J29686_10004214 JGI24751J29686_100042144 159
178 3300005289 Ga0065704_10127341 Ga0065704_101273412 159
179 3300005295 Ga0065707_10024896 Ga0065707_100248963 159
180 3300005295 Ga0065707_10340966 Ga0065707_103409662 159
181 3300005340 Ga0070689_100699979 Ga0070689_1006999792 159
182 3300005345 Ga0070692_10443358 Ga0070692_104433581 159
183 3300005440 Ga0070705_100656309 Ga0070705_1006563091 159
184 3300005441 Ga0070700_100105333 Ga0070700_1001053332 159
185 3300005445 Ga0070708_100131170 Ga0070708_1001311703 159
186 3300005471 Ga0070698_100004472 Ga0070698_1000044723 159
187 3300005545 Ga0070695_100052950 Ga0070695_1000529502 159
188 3300005546 Ga0070696_100377116 Ga0070696_1003771162 159
189 3300005549 Ga0070704_100653111 Ga0070704_1006531112 159
190 3300005577 Ga0068857_101392594 Ga0068857_1013925941 159
191 3300005617 Ga0068859_100914670 Ga0068859_1009146702 159
192 3300005719 Ga0068861_100013985 Ga0068861_1000139852 159
193 3300005841 Ga0068863_101477113 Ga0068863_1014771131 159
194 3300006847 Ga0075431_100009807 Ga0075431_1000098072 159
195 3300006931 Ga0097620_100914641 Ga0097620_1009146411 159
196 3300009148 Ga0105243_10467567 Ga0105243_104675672 159
197 3300009148 Ga0105243_11659718 Ga0105243_116597181 159
198 3300013100 Ga0157373_10330192 Ga0157373_103301921 159
199 3300013306 Ga0163162_11043375 Ga0163162_110433752 159
200 3300014325 Ga0163163_10017028 Ga0163163_100170285 159
201 3300014325 Ga0163163_10102159 Ga0163163_101021594 159
202 3300014325 Ga0163163_10660586 Ga0163163_106605862 159
203 3300014326 Ga0157380_10483642 Ga0157380_104836422 159
204 3300025911 Ga0207654_11021973 Ga0207654_110219731 159
205 3300025925 Ga0207650_10510160 Ga0207650_105101601 159
206 3300025934 Ga0207686_10256314 Ga0207686_102563142 159
207 3300025936 Ga0207670_10586819 Ga0207670_105868192 159
208 3300025942 Ga0207689_10003124 Ga0207689_1000312414 159
209 3300025942 Ga0207689_10003299 Ga0207689_1000329911 159
210 3300026075 Ga0207708_10228946 Ga0207708_102289462 159
211 3300026095 Ga0207676_10042369 Ga0207676_100423694 159
212 3300026116 Ga0207674_10843120 Ga0207674_108431202 159
213 3300026118 Ga0207675_100106278 Ga0207675_1001062783 159
214 3300031456 Ga0307513_10120667 Ga0307513_101206673 159
215 3300031548 Ga0307408_100028139 Ga0307408_1000281394 159
216 3300031824 Ga0307413_10274166 Ga0307413_102741662 159
217 3300031903 Ga0307407_10625158 Ga0307407_106251582 159
218 3300031995 Ga0307409_100572935 Ga0307409_1005729352 159
219 3300032004 Ga0307414_10439161 Ga0307414_104391612 159
220 3300032005 Ga0307411_10048665 Ga0307411_100486652 159
221 3300032126 Ga0307415_100043348 Ga0307415_1000433482 159
222 3300042012 Ga0439455_0173227 Ga0439455_0173227_87_584 159
223 3300042133 Ga0450896_018653 Ga0450896_018653_148_645 159
224 3300042145 Ga0450906_033567 Ga0450906_033567_122_619 159
225 3300045051 Ga0451576_1006974 Ga0451576_1006974_89_571 159
226 3300048918 Ga0496115_0803732 Ga0496115_0803732_215_694 159
227 3300049574 Ga0501038_0456483 Ga0501038_0456483_319_831 159
228 3300049581 Ga0501047_0018507 Ga0501047_0018507_4707_5219 159
229 3300049593 Ga0501077_0228827 Ga0501077_0228827_554_1033 159
230 3300049688 Ga0501259_026475 Ga0501259_026475_434_913 159
231 3300049704 Ga0501221_099067 Ga0501221_099067_181_660 159
232 3300049742 Ga0501080_0234234 Ga0501080_0234234_1062_1547 159
233 3300049744 Ga0501083_0324499 Ga0501083_0324499_158_670 159
234 3300049774 Ga0501278_033121 Ga0501278_033121_43_522 159
235 3300049823 Ga0501044_0001821 Ga0501044_0001821_11260_11772 159
236 3300050510 nmdc:mga06r32_8179_c1 nmdc:mga06r32_8179_c1_434_928 159

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02627

CMD

Carboxymuconolactone decarboxylase family

35

117

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
7xw1-assembly1.cif.gz_A the crystal structure of ahpd from pseudomonas aeruginosa 0.9722 10 139
2gmy-assembly1.cif.gz_C crystal structure of a protein of unknown function atu0492 from agrobacterium tumefaciens, putative antioxidant defence protein ahpd 0.9494 2 147
2ijc-assembly2.cif.gz_I structure of a conserved protein of unknown function pa0269 from pseudomonas aeruginosa 0.9438 1 149
7xw1-assembly1.cif.gz_A the crystal structure of ahpd from pseudomonas aeruginosa 0.9438 10 139
2gmy-assembly1.cif.gz_C crystal structure of a protein of unknown function atu0492 from agrobacterium tumefaciens, putative antioxidant defence protein ahpd 0.9432 2 147
ID Description Score Start End Superfamily
2ijcF00 Mainly Alpha;Up-down Bundle;AhpD-like;AhpD-like 0.9707 2 139 1.20.1290.10
2o4dA00 Mainly Alpha;Up-down Bundle;AhpD-like;AhpD-like 0.968 2 139 1.20.1290.10
af_Q2FVE0_2_139_1.20.1290.10 Mainly Alpha;Up-down Bundle;AhpD-like;AhpD-like 0.9539 6 138 1.20.1290.10
2gmyF00 Mainly Alpha;Up-down Bundle;AhpD-like;AhpD-like 0.9468 2 148 1.20.1290.10
2ijcF00 Mainly Alpha;Up-down Bundle;AhpD-like;AhpD-like 0.9435 2 139 1.20.1290.10
ID Description Score Start End GO Terms
AF-A0A522SKH8-F1-model_v4 Carboxymuconolactone decarboxylase family protein 0.9882 4 147 GO:0051920
AF-A0A536M3G1-F1-model_v4 Carboxymuconolactone decarboxylase-like domain-containing protein 0.988 1 149 GO:0051920
AF-A0A0W8ELG8-F1-model_v4 deleted 0.9873 4 144
AF-A0A7Y5WKW6-F1-model_v4 Carboxymuconolactone decarboxylase family protein 0.987 2 148 GO:0051920
AF-A0A6I3LU99-F1-model_v4 Carboxymuconolactone decarboxylase family protein 0.9863 1 145 GO:0051920

Feature Viewer

pLDDT pTM Quality
94.09 0.89 High
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Predicted Structure (AlphaFold2)

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