F348328
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 235 | 147 | 470 | 543 |
Family's Representative Sequence
| Representative Sequence | 3300038735|Ga0400485_08685|Ga0400485_08685_4983_6818 |
| Length | 611 |
| Sequence | VWIKAANPSAASGCYPDTQKQRNILIIIHIILFQQHNTDLQQKLGFPYGQECRNIYKKFNNGHYEQHMNIVTSNTQPFDDQRPGTSGLRKKVSVFKTPHYLENFVQAIFDTRPDLKGGILVLGGDGRYYNREAIQIILRMACANGVKQVLLGKGGLLSTPAASCLIRKYKTNGGIILSASHNPGGPDEDFGIKFNTPNGGPAPETVTEAIFNRTTEIDSYRTVQTPSIDLDKLGKVTLGETEIDIIDPVKDYADLMMELFDFDRIRMLFGSGVFSMRFDAMHAVTGPYAKEILEGRLGAEPGTVINGRPKVDFGGGHPDPNLVHAHQLVELTQGADAVNFAAASDGDGDRNMILGHNFFVTPSDSLAIMAANAHLIKGYSAGISGVARSMPTSQAADRVTDKLGLHCFETPTGWKFFGNLLDERKIALCGEESFGTGSDHIREKDGLWAVLFWLNLLAVKQQSVEKIVTDHWKAFGRNYYTRYDYEAIDKADAEDLITALREKLPSLPGQMLGHYTVEYADDFAYTDPVDGSRSEHQGLRVGFSDGSRIVFRLSGTGTEGATLRVYLEAYETDPAKQTQTTESVMTPLVDIALSLAEIEQRTGRRKPSVIT |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300038735 | Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 | Metagenome | Unclassified |
| 2 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 3 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 4 | 3300005333 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 16 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 20 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 21 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 22 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 23 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 24 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 25 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 26 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 27 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 28 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 29 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 30 | 3300021361 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 | Metagenome | Rhizosphere |
| 31 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 32 | 3300025254 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 33 | 3300025291 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 34 | 3300025893 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300028786 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM | Metagenome | Unclassified |
| 55 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 56 | 3300030522 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM | Metagenome | Unclassified |
| 57 | 3300031239 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG | Metagenome | Rhizosphere |
| 58 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 59 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 60 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 61 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 62 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 63 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 64 | 3300031691 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA | Metagenome | Rhizosphere |
| 65 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 66 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 67 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 68 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 69 | 3300031733 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 | Metagenome | Rhizosphere |
| 70 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 71 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 72 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 73 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 74 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 75 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 76 | 3300032139 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB | Metagenome | Rhizosphere |
| 77 | 3300032168 | Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 78 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 79 | 3300033541 | Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 80 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 81 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 82 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 83 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 84 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 85 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 86 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 87 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 88 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 89 | 3300038725 | Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 | Metagenome | Unclassified |
| 90 | 3300038726 | Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 | Metagenome | Unclassified |
| 91 | 3300038727 | Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 | Metagenome | Unclassified |
| 92 | 3300038741 | Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 | Metagenome | Unclassified |
| 93 | 3300038742 | Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 | Metagenome | Unclassified |
| 94 | 3300039062 | Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 | Metagenome | Unclassified |
| 95 | 3300039110 | Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 | Metagenome | Unclassified |
| 96 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 97 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 98 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 99 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 100 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046557 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 107 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 108 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 109 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 110 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 111 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 112 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 113 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 114 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 115 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 116 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 117 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 118 | 3300049515 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought | Metagenome | Rhizosphere |
| 119 | 3300049517 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_B_5_control | Metagenome | Rhizosphere |
| 120 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 121 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 122 | 3300049663 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought | Metagenome | Rhizosphere |
| 123 | 3300049690 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought | Metagenome | Rhizosphere |
| 124 | 3300049705 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought | Metagenome | Rhizosphere |
| 125 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 126 | 3300049775 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought | Metagenome | Rhizosphere |
| 127 | 3300049776 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought | Metagenome | Rhizosphere |
| 128 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 129 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 130 | 3300053104 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere | Metagenome | Endosphere |
| 131 | 3300053122 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere | Metagenome | Endosphere |
| 132 | 3300053125 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere | Metagenome | Endosphere |
| 133 | 3300053130 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere | Metagenome | Endosphere |
| 134 | 3300053133 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere | Metagenome | Endosphere |
| 135 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 136 | 3300053138 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere | Metagenome | Endosphere |
| 137 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 138 | 3300053140 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere | Metagenome | Endosphere |
| 139 | 3300053148 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere | Metagenome | Endosphere |
| 140 | 3300053154 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere | Metagenome | Endosphere |
| 141 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 142 | 3300053163 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere | Metagenome | Endosphere |
| 143 | 3300053724 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere | Metagenome | Endosphere |
| 144 | 2643221654 | Rhizobacter sp. Root404 | Isolate | Unclassified |
| 145 | 2919138771 | Novosphingobium sp. 1748 | Isolate | Rhizosphere |
| 146 | 8001522603 | Methylomicrobium sp. RS1 | Isolate | Unclassified |
| 147 | 8057101203 | Sphingomonas lycopersici MMSM20 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 97.45 |
| Metatranscriptomes | 0.85 |
| Isolates | 1.7 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 10.21 |
| Nodule | 0 |
| Rhizoplane | 2.98 |
| Rhizosphere | 57.87 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0.43 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0400485_08685 | 3300038735 | Bacteria | 24226 |
| 2 | Ga0070683_100085410 | 3300005329 | Bacteria | 2958 |
| 3 | Ga0070670_100000863 | 3300005331 | Bacteria | 23798 |
| 4 | Ga0070677_10000500 | 3300005333 | Bacteria | 13513 |
| 5 | Ga0070666_10019000 | 3300005335 | Bacteria | 4429 |
| 6 | Ga0070668_100052281 | 3300005347 | Bacteria | 3149 |
| 7 | Ga0070669_100001204 | 3300005353 | Bacteria | 18831 |
| 8 | Ga0070675_100000605 | 3300005354 | Bacteria | 24695 |
| 9 | Ga0070671_100000289 | 3300005355 | Bacteria | 34220 |
| 10 | Ga0070671_100010499 | 3300005355 | Bacteria | 7433 |
| 11 | Ga0070671_100016874 | 3300005355 | Bacteria | 5907 |
| 12 | Ga0070674_100003278 | 3300005356 | Bacteria | 9053 |
| 13 | Ga0070673_100010448 | 3300005364 | Bacteria | 6286 |
| 14 | Ga0070667_100001624 | 3300005367 | Bacteria | 20125 |
| 15 | Ga0070667_100015373 | 3300005367 | Bacteria | 6327 |
| 16 | Ga0070714_100158257 | 3300005435 | Bacteria | 2047 |
| 17 | Ga0070678_100006466 | 3300005456 | Bacteria | 6881 |
| 18 | Ga0068867_100012571 | 3300005459 | Bacteria | 5986 |
| 19 | Ga0070672_100011953 | 3300005543 | Bacteria | 6069 |
| 20 | Ga0070665_100002800 | 3300005548 | Bacteria | 18903 |
| 21 | Ga0070665_100146793 | 3300005548 | Bacteria | 2361 |
| 22 | Ga0070664_100057679 | 3300005564 | Bacteria | 3301 |
| 23 | Ga0068864_100042131 | 3300005618 | Bacteria | 3906 |
| 24 | Ga0068864_100056196 | 3300005618 | Bacteria | 3400 |
| 25 | Ga0068864_100062700 | 3300005618 | Bacteria | 3221 |
| 26 | Ga0068863_100000006 | 3300005841 | Bacteria | 265379 |
| 27 | Ga0068863_100025124 | 3300005841 | Bacteria | 5681 |
| 28 | Ga0068863_100072043 | 3300005841 | Bacteria | 3269 |
| 29 | Ga0068860_100000105 | 3300005843 | Bacteria | 134520 |
| 30 | Ga0075370_10020304 | 3300006353 | Bacteria | 3629 |
| 31 | Ga0105242_10022391 | 3300009176 | Bacteria | 4968 |
| 32 | Ga0105248_10027860 | 3300009177 | Bacteria | 6290 |
| 33 | Ga0105248_10228054 | 3300009177 | Bacteria | 2097 |
| 34 | Ga0105239_10000025 | 3300010375 | Bacteria | 254049 |
| 35 | Ga0157374_10095443 | 3300013296 | Bacteria | 2843 |
| 36 | Ga0157374_10115589 | 3300013296 | Bacteria | 2585 |
| 37 | Ga0157375_10041722 | 3300013308 | Bacteria | 4433 |
| 38 | Ga0157380_10026446 | 3300014326 | Bacteria | 4405 |
| 39 | Ga0163161_10041072 | 3300017792 | Bacteria | 3323 |
| 40 | Ga0213872_10000988 | 3300021361 | Bacteria | 19903 |
| 41 | Ga0213872_10002177 | 3300021361 | Bacteria | 11737 |
| 42 | Ga0213872_10003926 | 3300021361 | Bacteria | 8055 |
| 43 | Ga0213875_10000132 | 3300021388 | Bacteria | 82929 |
| 44 | Ga0213875_10000707 | 3300021388 | Bacteria | 25641 |
| 45 | Ga0209148_1001244 | 3300025254 | Bacteria | 14215 |
| 46 | Ga0209675_1002771 | 3300025291 | Bacteria | 8751 |
| 47 | Ga0207682_10002636 | 3300025893 | Bacteria | 7984 |
| 48 | Ga0207680_10030112 | 3300025903 | Bacteria | 3057 |
| 49 | Ga0207695_10000347 | 3300025913 | Bacteria | 107013 |
| 50 | Ga0207671_10000952 | 3300025914 | Bacteria | 35982 |
| 51 | Ga0207681_10001625 | 3300025923 | Bacteria | 14491 |
| 52 | Ga0207650_10000326 | 3300025925 | Bacteria | 46321 |
| 53 | Ga0207650_10021537 | 3300025925 | Bacteria | 4555 |
| 54 | Ga0207659_10005507 | 3300025926 | Bacteria | 7681 |
| 55 | Ga0207664_10181166 | 3300025929 | Bacteria | 1809 |
| 56 | Ga0207644_10000011 | 3300025931 | Bacteria | 223950 |
| 57 | Ga0207644_10003783 | 3300025931 | Bacteria | 9804 |
| 58 | Ga0207669_10002254 | 3300025937 | Bacteria | 8197 |
| 59 | Ga0207691_10000049 | 3300025940 | Bacteria | 94813 |
| 60 | Ga0207711_10004488 | 3300025941 | Bacteria | 11894 |
| 61 | Ga0207711_10012571 | 3300025941 | Bacteria | 7031 |
| 62 | Ga0207651_10004150 | 3300025960 | Bacteria | 7244 |
| 63 | Ga0207658_10006888 | 3300025986 | Bacteria | 7738 |
| 64 | Ga0207658_10010356 | 3300025986 | Bacteria | 6333 |
| 65 | Ga0207677_10022560 | 3300026023 | Bacteria | 3871 |
| 66 | Ga0207641_10000271 | 3300026088 | Bacteria | 65831 |
| 67 | Ga0207641_10030113 | 3300026088 | Bacteria | 4494 |
| 68 | Ga0207648_10035913 | 3300026089 | Bacteria | 4367 |
| 69 | Ga0207683_10032341 | 3300026121 | Bacteria | 4544 |
| 70 | Ga0207683_10044723 | 3300026121 | Bacteria | 3871 |
| 71 | Ga0268266_10003567 | 3300028379 | Bacteria | 15419 |
| 72 | Ga0268264_10000067 | 3300028381 | Bacteria | 284445 |
| 73 | Ga0307517_10000918 | 3300028786 | Bacteria | 49925 |
| 74 | Ga0307515_10019603 | 3300028794 | Bacteria | 12153 |
| 75 | Ga0307512_10068375 | 3300030522 | Bacteria | 2665 |
| 76 | Ga0265328_10035328 | 3300031239 | Bacteria | 1849 |
| 77 | Ga0265331_10002619 | 3300031250 | Bacteria | 12070 |
| 78 | Ga0265331_10021473 | 3300031250 | Bacteria | 3304 |
| 79 | Ga0265331_10031808 | 3300031250 | Bacteria | 2620 |
| 80 | Ga0265327_10000542 | 3300031251 | Bacteria | 64581 |
| 81 | Ga0265327_10001255 | 3300031251 | Bacteria | 33656 |
| 82 | Ga0265327_10001441 | 3300031251 | Bacteria | 29977 |
| 83 | Ga0265327_10001871 | 3300031251 | Bacteria | 24368 |
| 84 | Ga0265316_10005289 | 3300031344 | Bacteria | 12590 |
| 85 | Ga0307513_10133950 | 3300031456 | Bacteria | 2417 |
| 86 | Ga0307509_10000509 | 3300031507 | Bacteria | 66233 |
| 87 | Ga0307509_10011291 | 3300031507 | Bacteria | 10833 |
| 88 | Ga0307509_10017545 | 3300031507 | Bacteria | 8233 |
| 89 | Ga0307508_10000099 | 3300031616 | Bacteria | 102389 |
| 90 | Ga0307508_10032336 | 3300031616 | Bacteria | 4725 |
| 91 | Ga0307508_10067086 | 3300031616 | Bacteria | 3157 |
| 92 | Ga0316579_10000039 | 3300031691 | Bacteria | 30349 |
| 93 | Ga0316579_10003665 | 3300031691 | Bacteria | 6039 |
| 94 | Ga0316579_10010217 | 3300031691 | Bacteria | 3963 |
| 95 | Ga0265314_10004459 | 3300031711 | Bacteria | 12991 |
| 96 | Ga0316576_10007426 | 3300031727 | Bacteria | 6903 |
| 97 | Ga0316576_10015390 | 3300031727 | Bacteria | 5132 |
| 98 | Ga0316576_10035208 | 3300031727 | Bacteria | 3573 |
| 99 | Ga0316578_10024190 | 3300031728 | Bacteria | 3406 |
| 100 | Ga0307405_10006227 | 3300031731 | Bacteria | 5848 |
| 101 | Ga0316577_10036394 | 3300031733 | Bacteria | 2753 |
| 102 | Ga0307413_10013374 | 3300031824 | Bacteria | 4123 |
| 103 | Ga0307410_10045358 | 3300031852 | Bacteria | 2926 |
| 104 | Ga0307407_10102850 | 3300031903 | Bacteria | 1777 |
| 105 | Ga0307409_100067560 | 3300031995 | Bacteria | 2823 |
| 106 | Ga0307416_100010692 | 3300032002 | Bacteria | 6079 |
| 107 | Ga0307415_100013457 | 3300032126 | Bacteria | 4777 |
| 108 | Ga0316580_10014173 | 3300032139 | Unclassified | 2434 |
| 109 | Ga0316593_10005220 | 3300032168 | Bacteria | 3407 |
| 110 | Ga0307510_10033895 | 3300033180 | Bacteria | 5726 |
| 111 | Ga0316596_1002743 | 3300033541 | Bacteria | 3792 |
| 112 | Ga0316574_0001102 | 3300035398 | Bacteria | 12371 |
| 113 | Ga0316574_0001239 | 3300035398 | Bacteria | 11904 |
| 114 | Ga0316574_0008160 | 3300035398 | Bacteria | 5795 |
| 115 | Ga0316574_0065965 | 3300035398 | Bacteria | 2280 |
| 116 | Ga0373927_0002171 | 3300035695 | Bacteria | 14402 |
| 117 | Ga0316582_0009623 | 3300036647 | Bacteria | 5253 |
| 118 | Ga0316582_0011989 | 3300036647 | Bacteria | 4821 |
| 119 | Ga0316582_0034985 | 3300036647 | Bacteria | 3098 |
| 120 | Ga0316584_0017858 | 3300036712 | Bacteria | 5109 |
| 121 | Ga0316584_0179974 | 3300036712 | Bacteria | 1565 |
| 122 | Ga0373925_0089144 | 3300037068 | Bacteria | 2356 |
| 123 | Ga0395899_0019889 | 3300037312 | Bacteria | 5094 |
| 124 | Ga0395905_0016725 | 3300037471 | Bacteria | 6970 |
| 125 | Ga0436364_0717863 | 3300037853 | Bacteria | 145182 |
| 126 | Ga0436364_1385478 | 3300037853 | Bacteria | 81069 |
| 127 | Ga0395901_0006740 | 3300038443 | Bacteria | 11603 |
| 128 | Ga0395901_0183962 | 3300038443 | Bacteria | 2192 |
| 129 | Ga0400484_11044 | 3300038725 | Bacteria | 4452 |
| 130 | Ga0400484_25561 | 3300038725 | Bacteria | 4823 |
| 131 | Ga0400484_26656 | 3300038725 | Bacteria | 7496 |
| 132 | Ga0400484_33872 | 3300038725 | Bacteria | 14051 |
| 133 | Ga0400484_34299 | 3300038725 | Bacteria | 21981 |
| 134 | Ga0400484_39585 | 3300038725 | Bacteria | 4243 |
| 135 | Ga0400490_00715 | 3300038726 | Bacteria | 87348 |
| 136 | Ga0400490_17224 | 3300038726 | Bacteria | 3437 |
| 137 | Ga0400490_21678 | 3300038726 | Bacteria | 3447 |
| 138 | Ga0400490_25771 | 3300038726 | Bacteria | 106431 |
| 139 | Ga0400490_28529 | 3300038726 | Bacteria | 26677 |
| 140 | Ga0400490_36858 | 3300038726 | Bacteria | 32496 |
| 141 | Ga0400490_46971 | 3300038726 | Bacteria | 3425 |
| 142 | Ga0400491_17401 | 3300038727 | Bacteria | 5495 |
| 143 | Ga0400485_19863 | 3300038735 | Bacteria | 101440 |
| 144 | Ga0400488_03110 | 3300038741 | Bacteria | 8032 |
| 145 | Ga0400488_04299 | 3300038741 | Bacteria | 7950 |
| 146 | Ga0400488_05173 | 3300038741 | Bacteria | 4224 |
| 147 | Ga0400488_12461 | 3300038741 | Bacteria | 3562 |
| 148 | Ga0400488_41061 | 3300038741 | Bacteria | 7461 |
| 149 | Ga0400486_00493 | 3300038742 | Bacteria | 29569 |
| 150 | Ga0400486_13533 | 3300038742 | Bacteria | 5272 |
| 151 | Ga0400486_19188 | 3300038742 | Bacteria | 196185 |
| 152 | Ga0400486_22204 | 3300038742 | Bacteria | 4431 |
| 153 | Ga0400483_000639 | 3300039062 | Bacteria | 9826 |
| 154 | Ga0400483_075551 | 3300039062 | Bacteria | 3285 |
| 155 | Ga0400483_076133 | 3300039062 | Bacteria | 9214 |
| 156 | Ga0400483_081987 | 3300039062 | Bacteria | 5332 |
| 157 | Ga0400483_082753 | 3300039062 | Bacteria | 5515 |
| 158 | Ga0400483_088914 | 3300039062 | Bacteria | 13472 |
| 159 | Ga0400483_117884 | 3300039062 | Bacteria | 2533 |
| 160 | Ga0400483_119375 | 3300039062 | Bacteria | 4210 |
| 161 | Ga0400483_164740 | 3300039062 | Bacteria | 4370 |
| 162 | Ga0400483_213852 | 3300039062 | Bacteria | 11200 |
| 163 | Ga0400487_03854 | 3300039110 | Bacteria | 143220 |
| 164 | Ga0400487_35120 | 3300039110 | Bacteria | 88723 |
| 165 | Ga0400487_37726 | 3300039110 | Bacteria | 4059 |
| 166 | Ga0400487_38000 | 3300039110 | Bacteria | 182775 |
| 167 | Ga0400487_43457 | 3300039110 | Bacteria | 14855 |
| 168 | Ga0400487_48530 | 3300039110 | Bacteria | 8995 |
| 169 | Ga0436361_0143236 | 3300039447 | Bacteria | 116593 |
| 170 | Ga0436361_0162149 | 3300039447 | Bacteria | 22376 |
| 171 | Ga0436361_0182536 | 3300039447 | Bacteria | 5325 |
| 172 | Ga0436361_0410458 | 3300039447 | Bacteria | 41052 |
| 173 | Ga0451577_0031350 | 3300042876 | Bacteria | 4797 |
| 174 | Ga0453684_0004304 | 3300044712 | Bacteria | 30334 |
| 175 | Ga0451576_0000041 | 3300045051 | Bacteria | 343432 |
| 176 | Ga0451576_0001606 | 3300045051 | Bacteria | 37960 |
| 177 | Ga0451576_0006694 | 3300045051 | Bacteria | 14056 |
| 178 | Ga0495592_0000140 | 3300046454 | Bacteria | 63848 |
| 179 | Ga0495606_0000043 | 3300046507 | Bacteria | 214367 |
| 180 | Ga0495643_0012508 | 3300046522 | Bacteria | 5118 |
| 181 | Ga0495622_0004373 | 3300046557 | Bacteria | 6582 |
| 182 | Ga0495668_0020326 | 3300046616 | Bacteria | 3820 |
| 183 | Ga0495676_0017478 | 3300047321 | Bacteria | 6340 |
| 184 | Ga0496100_0008367 | 3300048903 | Bacteria | 5766 |
| 185 | Ga0496101_0008317 | 3300048904 | Bacteria | 6780 |
| 186 | Ga0496104_0015251 | 3300048907 | Bacteria | 6958 |
| 187 | Ga0496104_0032561 | 3300048907 | Bacteria | 4852 |
| 188 | Ga0496105_0006631 | 3300048908 | Bacteria | 8912 |
| 189 | Ga0496106_0014080 | 3300048909 | Bacteria | 5910 |
| 190 | Ga0496107_0000473 | 3300048910 | Bacteria | 22078 |
| 191 | Ga0496118_0062319 | 3300048921 | Bacteria | 2754 |
| 192 | Ga0496121_0000031 | 3300048924 | Bacteria | 384119 |
| 193 | Ga0496121_0000245 | 3300048924 | Bacteria | 116316 |
| 194 | Ga0496121_0002374 | 3300048924 | Bacteria | 28961 |
| 195 | Ga0496122_0000768 | 3300048925 | Bacteria | 61953 |
| 196 | Ga0496123_0000335 | 3300048926 | Bacteria | 89251 |
| 197 | Ga0496125_0041934 | 3300048928 | Bacteria | 3906 |
| 198 | Ga0496126_0006285 | 3300048929 | Bacteria | 13262 |
| 199 | Ga0496126_0045992 | 3300048929 | Bacteria | 4008 |
| 200 | Ga0496126_0056415 | 3300048929 | Bacteria | 3551 |
| 201 | Ga0501292_000046 | 3300049515 | Bacteria | 25946 |
| 202 | Ga0501294_000580 | 3300049517 | Bacteria | 4201 |
| 203 | Ga0501037_0025646 | 3300049573 | Bacteria | 4355 |
| 204 | Ga0501074_0007169 | 3300049590 | Bacteria | 8049 |
| 205 | Ga0501223_000778 | 3300049663 | Bacteria | 7567 |
| 206 | Ga0501261_000044 | 3300049690 | Bacteria | 25231 |
| 207 | Ga0501225_0015351 | 3300049705 | Bacteria | 2132 |
| 208 | Ga0501080_0013180 | 3300049742 | Bacteria | 7596 |
| 209 | Ga0501279_000046 | 3300049775 | Bacteria | 25767 |
| 210 | Ga0501280_000473 | 3300049776 | Bacteria | 9555 |
| 211 | nmdc:mga00v17_97938_c1 | 3300050491 | Bacteria | 1849 |
| 212 | nmdc:mga07m45_14278_c1 | 3300050496 | Bacteria | 4227 |
| 213 | Ga0500556_0000013 | 3300053104 | Bacteria | 243797 |
| 214 | Ga0500608_000694 | 3300053122 | Bacteria | 12312 |
| 215 | Ga0500618_003282 | 3300053125 | Bacteria | 5614 |
| 216 | Ga0500642_0000002 | 3300053130 | Bacteria | 795093 |
| 217 | Ga0500642_0005159 | 3300053130 | Bacteria | 4184 |
| 218 | Ga0500655_000081 | 3300053133 | Bacteria | 25123 |
| 219 | Ga0500559_0000027 | 3300053136 | Bacteria | 118758 |
| 220 | Ga0500559_0013139 | 3300053136 | Bacteria | 3509 |
| 221 | Ga0500564_000073 | 3300053138 | Bacteria | 26603 |
| 222 | Ga0500568_0031726 | 3300053139 | Bacteria | 2177 |
| 223 | Ga0500573_0020604 | 3300053140 | Bacteria | 3777 |
| 224 | Ga0500590_000198 | 3300053148 | Bacteria | 18343 |
| 225 | Ga0500590_010924 | 3300053148 | Bacteria | 4593 |
| 226 | Ga0500619_000045 | 3300053154 | Bacteria | 38384 |
| 227 | Ga0500622_0000395 | 3300053156 | Bacteria | 41993 |
| 228 | Ga0500622_0008317 | 3300053156 | Bacteria | 5814 |
| 229 | Ga0500622_0008332 | 3300053156 | Bacteria | 5807 |
| 230 | Ga0500639_021847 | 3300053163 | Bacteria | 3381 |
| 231 | Ga0500570_000014 | 3300053724 | Bacteria | 52194 |
| 232 | 2644303659 | 2643221654 | Bacteria | 5273570 |
| 233 | 2919142831 | 2919138771 | Bacteria | 5281312 |
| 234 | 8001524110 | 8001522603 | Bacteria | 4726425 |
| 235 | 8057101339 | 8057101203 | Bacteria | 5034064 |
| 236 | Ga0400485_08685 | |||
| 237 | Ga0070683_100085410 | |||
| 238 | Ga0070670_100000863 | |||
| 239 | Ga0070677_10000500 | |||
| 240 | Ga0070666_10019000 | |||
| 241 | Ga0070668_100052281 | |||
| 242 | Ga0070669_100001204 | |||
| 243 | Ga0070675_100000605 | |||
| 244 | Ga0070671_100000289 | |||
| 245 | Ga0070671_100010499 | |||
| 246 | Ga0070671_100016874 | |||
| 247 | Ga0070674_100003278 | |||
| 248 | Ga0070673_100010448 | |||
| 249 | Ga0070667_100001624 | |||
| 250 | Ga0070667_100015373 | |||
| 251 | Ga0070714_100158257 | |||
| 252 | Ga0070678_100006466 | |||
| 253 | Ga0068867_100012571 | |||
| 254 | Ga0070672_100011953 | |||
| 255 | Ga0070665_100002800 | |||
| 256 | Ga0070665_100146793 | |||
| 257 | Ga0070664_100057679 | |||
| 258 | Ga0068864_100042131 | |||
| 259 | Ga0068864_100056196 | |||
| 260 | Ga0068864_100062700 | |||
| 261 | Ga0068863_100000006 | |||
| 262 | Ga0068863_100025124 | |||
| 263 | Ga0068863_100072043 | |||
| 264 | Ga0068860_100000105 | |||
| 265 | Ga0075370_10020304 | |||
| 266 | Ga0105242_10022391 | |||
| 267 | Ga0105248_10027860 | |||
| 268 | Ga0105248_10228054 | |||
| 269 | Ga0105239_10000025 | |||
| 270 | Ga0157374_10095443 | |||
| 271 | Ga0157374_10115589 | |||
| 272 | Ga0157375_10041722 | |||
| 273 | Ga0157380_10026446 | |||
| 274 | Ga0163161_10041072 | |||
| 275 | Ga0213872_10000988 | |||
| 276 | Ga0213872_10002177 | |||
| 277 | Ga0213872_10003926 | |||
| 278 | Ga0213875_10000132 | |||
| 279 | Ga0213875_10000707 | |||
| 280 | Ga0209148_1001244 | |||
| 281 | Ga0209675_1002771 | |||
| 282 | Ga0207682_10002636 | |||
| 283 | Ga0207680_10030112 | |||
| 284 | Ga0207695_10000347 | |||
| 285 | Ga0207671_10000952 | |||
| 286 | Ga0207681_10001625 | |||
| 287 | Ga0207650_10000326 | |||
| 288 | Ga0207650_10021537 | |||
| 289 | Ga0207659_10005507 | |||
| 290 | Ga0207664_10181166 | |||
| 291 | Ga0207644_10000011 | |||
| 292 | Ga0207644_10003783 | |||
| 293 | Ga0207669_10002254 | |||
| 294 | Ga0207691_10000049 | |||
| 295 | Ga0207711_10004488 | |||
| 296 | Ga0207711_10012571 | |||
| 297 | Ga0207651_10004150 | |||
| 298 | Ga0207658_10006888 | |||
| 299 | Ga0207658_10010356 | |||
| 300 | Ga0207677_10022560 | |||
| 301 | Ga0207641_10000271 | |||
| 302 | Ga0207641_10030113 | |||
| 303 | Ga0207648_10035913 | |||
| 304 | Ga0207683_10032341 | |||
| 305 | Ga0207683_10044723 | |||
| 306 | Ga0268266_10003567 | |||
| 307 | Ga0268264_10000067 | |||
| 308 | Ga0307517_10000918 | |||
| 309 | Ga0307515_10019603 | |||
| 310 | Ga0307512_10068375 | |||
| 311 | Ga0265328_10035328 | |||
| 312 | Ga0265331_10002619 | |||
| 313 | Ga0265331_10021473 | |||
| 314 | Ga0265331_10031808 | |||
| 315 | Ga0265327_10000542 | |||
| 316 | Ga0265327_10001255 | |||
| 317 | Ga0265327_10001441 | |||
| 318 | Ga0265327_10001871 | |||
| 319 | Ga0265316_10005289 | |||
| 320 | Ga0307513_10133950 | |||
| 321 | Ga0307509_10000509 | |||
| 322 | Ga0307509_10011291 | |||
| 323 | Ga0307509_10017545 | |||
| 324 | Ga0307508_10000099 | |||
| 325 | Ga0307508_10032336 | |||
| 326 | Ga0307508_10067086 | |||
| 327 | Ga0316579_10000039 | |||
| 328 | Ga0316579_10003665 | |||
| 329 | Ga0316579_10010217 | |||
| 330 | Ga0265314_10004459 | |||
| 331 | Ga0316576_10007426 | |||
| 332 | Ga0316576_10015390 | |||
| 333 | Ga0316576_10035208 | |||
| 334 | Ga0316578_10024190 | |||
| 335 | Ga0307405_10006227 | |||
| 336 | Ga0316577_10036394 | |||
| 337 | Ga0307413_10013374 | |||
| 338 | Ga0307410_10045358 | |||
| 339 | Ga0307407_10102850 | |||
| 340 | Ga0307409_100067560 | |||
| 341 | Ga0307416_100010692 | |||
| 342 | Ga0307415_100013457 | |||
| 343 | Ga0316580_10014173 | |||
| 344 | Ga0316593_10005220 | |||
| 345 | Ga0307510_10033895 | |||
| 346 | Ga0316596_1002743 | |||
| 347 | Ga0316574_0001102 | |||
| 348 | Ga0316574_0001239 | |||
| 349 | Ga0316574_0008160 | |||
| 350 | Ga0316574_0065965 | |||
| 351 | Ga0373927_0002171 | |||
| 352 | Ga0316582_0009623 | |||
| 353 | Ga0316582_0011989 | |||
| 354 | Ga0316582_0034985 | |||
| 355 | Ga0316584_0017858 | |||
| 356 | Ga0316584_0179974 | |||
| 357 | Ga0373925_0089144 | |||
| 358 | Ga0395899_0019889 | |||
| 359 | Ga0395905_0016725 | |||
| 360 | Ga0436364_0717863 | |||
| 361 | Ga0436364_1385478 | |||
| 362 | Ga0395901_0006740 | |||
| 363 | Ga0395901_0183962 | |||
| 364 | Ga0400484_11044 | |||
| 365 | Ga0400484_25561 | |||
| 366 | Ga0400484_26656 | |||
| 367 | Ga0400484_33872 | |||
| 368 | Ga0400484_34299 | |||
| 369 | Ga0400484_39585 | |||
| 370 | Ga0400490_00715 | |||
| 371 | Ga0400490_17224 | |||
| 372 | Ga0400490_21678 | |||
| 373 | Ga0400490_25771 | |||
| 374 | Ga0400490_28529 | |||
| 375 | Ga0400490_36858 | |||
| 376 | Ga0400490_46971 | |||
| 377 | Ga0400491_17401 | |||
| 378 | Ga0400485_19863 | |||
| 379 | Ga0400488_03110 | |||
| 380 | Ga0400488_04299 | |||
| 381 | Ga0400488_05173 | |||
| 382 | Ga0400488_12461 | |||
| 383 | Ga0400488_41061 | |||
| 384 | Ga0400486_00493 | |||
| 385 | Ga0400486_13533 | |||
| 386 | Ga0400486_19188 | |||
| 387 | Ga0400486_22204 | |||
| 388 | Ga0400483_000639 | |||
| 389 | Ga0400483_075551 | |||
| 390 | Ga0400483_076133 | |||
| 391 | Ga0400483_081987 | |||
| 392 | Ga0400483_082753 | |||
| 393 | Ga0400483_088914 | |||
| 394 | Ga0400483_117884 | |||
| 395 | Ga0400483_119375 | |||
| 396 | Ga0400483_164740 | |||
| 397 | Ga0400483_213852 | |||
| 398 | Ga0400487_03854 | |||
| 399 | Ga0400487_35120 | |||
| 400 | Ga0400487_37726 | |||
| 401 | Ga0400487_38000 | |||
| 402 | Ga0400487_43457 | |||
| 403 | Ga0400487_48530 | |||
| 404 | Ga0436361_0143236 | |||
| 405 | Ga0436361_0162149 | |||
| 406 | Ga0436361_0182536 | |||
| 407 | Ga0436361_0410458 | |||
| 408 | Ga0451577_0031350 | |||
| 409 | Ga0453684_0004304 | |||
| 410 | Ga0451576_0000041 | |||
| 411 | Ga0451576_0001606 | |||
| 412 | Ga0451576_0006694 | |||
| 413 | Ga0495592_0000140 | |||
| 414 | Ga0495606_0000043 | |||
| 415 | Ga0495643_0012508 | |||
| 416 | Ga0495622_0004373 | |||
| 417 | Ga0495668_0020326 | |||
| 418 | Ga0495676_0017478 | |||
| 419 | Ga0496100_0008367 | |||
| 420 | Ga0496101_0008317 | |||
| 421 | Ga0496104_0015251 | |||
| 422 | Ga0496104_0032561 | |||
| 423 | Ga0496105_0006631 | |||
| 424 | Ga0496106_0014080 | |||
| 425 | Ga0496107_0000473 | |||
| 426 | Ga0496118_0062319 | |||
| 427 | Ga0496121_0000031 | |||
| 428 | Ga0496121_0000245 | |||
| 429 | Ga0496121_0002374 | |||
| 430 | Ga0496122_0000768 | |||
| 431 | Ga0496123_0000335 | |||
| 432 | Ga0496125_0041934 | |||
| 433 | Ga0496126_0006285 | |||
| 434 | Ga0496126_0045992 | |||
| 435 | Ga0496126_0056415 | |||
| 436 | Ga0501292_000046 | |||
| 437 | Ga0501294_000580 | |||
| 438 | Ga0501037_0025646 | |||
| 439 | Ga0501074_0007169 | |||
| 440 | Ga0501223_000778 | |||
| 441 | Ga0501261_000044 | |||
| 442 | Ga0501225_0015351 | |||
| 443 | Ga0501080_0013180 | |||
| 444 | Ga0501279_000046 | |||
| 445 | Ga0501280_000473 | |||
| 446 | nmdc:mga00v17_97938_c1 | |||
| 447 | nmdc:mga07m45_14278_c1 | |||
| 448 | Ga0500556_0000013 | |||
| 449 | Ga0500608_000694 | |||
| 450 | Ga0500618_003282 | |||
| 451 | Ga0500642_0000002 | |||
| 452 | Ga0500642_0005159 | |||
| 453 | Ga0500655_000081 | |||
| 454 | Ga0500559_0000027 | |||
| 455 | Ga0500559_0013139 | |||
| 456 | Ga0500564_000073 | |||
| 457 | Ga0500568_0031726 | |||
| 458 | Ga0500573_0020604 | |||
| 459 | Ga0500590_000198 | |||
| 460 | Ga0500590_010924 | |||
| 461 | Ga0500619_000045 | |||
| 462 | Ga0500622_0000395 | |||
| 463 | Ga0500622_0008317 | |||
| 464 | Ga0500622_0008332 | |||
| 465 | Ga0500639_021847 | |||
| 466 | Ga0500570_000014 | |||
| 467 | 2644303659 | |||
| 468 | 2919142831 | |||
| 469 | 8001524110 | |||
| 470 | 8057101339 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 5vg7-assembly1.cif.gz_A | crystal structure of the r503q missense variant of human pgm1 | 0.9761 | 2 | 551 |
| 5vbi-assembly2.cif.gz_B | crystal structure of the r515w missense variant of human pgm1 | 0.9754 | 1 | 551 |
| 5vg7-assembly2.cif.gz_B | crystal structure of the r503q missense variant of human pgm1 | 0.9754 | 1 | 551 |
| 5vec-assembly2.cif.gz_B | crystal structure of the r515l missense variant of human pgm1 | 0.9747 | 2 | 551 |
| 6uiq-assembly1.cif.gz_B | crystal structure of wild-type human phosphoglucomutase 1 in complex with glucose-6-phosphate | 0.9744 | 2 | 551 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 5vinB03 | Alpha Beta;3-Layer(aba) Sandwich;Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3;Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 | 0.9863 | 292 | 389 | 3.40.120.10 |
| af_Q23919_410_572_3.30.310.50 | Alpha Beta;2-Layer Sandwich;TATA-Binding Protein;Alpha-D-phosphohexomutase, C-terminal domain | 0.9778 | 398 | 551 | 3.30.310.50 |
| af_A0A1D6LQ82_22_186_3.40.120.10 | Alpha Beta;3-Layer(aba) Sandwich;Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3;Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 | 0.9767 | 49 | 190 | 3.40.120.10 |
| af_A0A1D6GJ73_272_380_3.40.120.10 | Alpha Beta;3-Layer(aba) Sandwich;Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3;Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 | 0.9745 | 194 | 292 | 3.40.120.10 |
| af_P33401_4_197_3.40.120.10 | Alpha Beta;3-Layer(aba) Sandwich;Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3;Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 | 0.9741 | 4 | 188 | 3.40.120.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-E4XCY5-F1-model_v4 | Alpha-D-phosphohexomutase alpha/beta/alpha domain-containing protein | 0.9971 | 273 | 374 |
GO:0004614
GO:0005829 GO:0005975 |
| AF-A0A2M7NBW9-F1-model_v4 | phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) | 0.9964 | 73 | 412 |
GO:0000287
GO:0004614 GO:0005829 GO:0005975 |
| AF-A0A6P0XT78-F1-model_v4 | Alpha-D-glucose phosphate-specific phosphoglucomutase | 0.9957 | 7 | 129 |
GO:0000287
GO:0004614 GO:0005829 GO:0005975 |
| AF-Q4C0U8-F1-model_v4 | phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) | 0.9952 | 4 | 316 |
GO:0000287
GO:0004614 GO:0005829 GO:0005975 |
| AF-A0A7R8WWG4-F1-model_v4 | phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) | 0.995 | 2 | 345 |
GO:0000287
GO:0004614 GO:0005829 GO:0005975 |