F347468

General Info

Members Datasets Scaffolds Average Seq Length
234 170 468 442

Family's Representative Sequence

Representative Sequence 3300048920|Ga0496117_0014915|Ga0496117_0014915_965_2515
Length 516
Sequence MQPCRLGGGWIRLGKPRNLPSSRNGPPADSAVVQPENVPAHDRICETAIAHPLDIVSRDMDTKPPVPRAILVGIQLPGVDETAHDASLAELGRLVKTLGYDVVGTLSQKRDDIGGATVLGKGRLEELAAMTGGTGVVASMAPVRKSKARERFEEPDAKKPSAPRNELASEPDPEGKPKPEFVIVDHDISPSQARNLERATGAQVLDRTGVIVEIFHRHAHSREAKLQVEIARLKYVSPRLRESSAGGDRHQGSGAGESDLELDRRKIRDRLAELKEQLEDIQRDSDQRRFGRRDQLRVALVGYTNAGKSSLMRALTGSEVLVADKLFATLDTTVRALQPAAKPGVLVSDTVGFIKKLPHDLVASFRSTLAEALEASLLLFVVDASDPTYESQLEVSRGVLREIGADVVPSRLLLNKIDRVSEPEREALRAKHPDAIMLSARSPEDVTALRESIIAFFETSMVDDQLVLPYAKQGMLSDVYENTRVLSEDYDTTGRVMTVRGLPGAIASLKRALAAS

Samples

Sample ID Description Type Environment
1 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
2 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
7 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
10 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
11 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
12 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
18 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
19 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
20 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
21 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
22 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
23 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
24 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
25 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
26 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
27 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
28 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
29 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
30 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
31 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
32 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
33 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
34 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
35 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
57 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
58 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
59 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
60 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
61 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
62 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
63 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
64 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
65 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
66 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
67 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
68 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
69 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
70 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
71 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
72 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
73 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
74 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
75 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
76 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
77 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
78 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
79 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
80 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
81 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
82 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
83 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
84 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
85 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
86 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
87 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
88 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
89 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
90 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
91 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
92 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
93 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
94 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
95 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
96 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
97 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
98 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
99 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
100 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
101 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
102 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
103 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
104 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
105 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
106 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
107 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
108 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
109 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
110 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
111 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
112 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
113 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
114 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
115 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
116 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
117 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
118 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
119 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
120 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
123 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
124 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
125 3300049660 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_B_0_control Metagenome Rhizosphere
126 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
127 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
128 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
129 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
130 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
131 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
132 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
133 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
134 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
135 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
136 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
137 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
138 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
139 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
140 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
141 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
142 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
143 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
144 2524023228 Bradyrhizobium sp. Th.b2 Isolate Nodule
145 2528768022 Bradyrhizobium japonicum USDA 123 Isolate Nodule
146 2571042143 Paenibacillus graminis RSA19 Isolate Unclassified
147 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
148 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
149 2818991459 Paenibacillus sp. 597 Isolate Unclassified
150 2842775625 Roseomonas sp. R-71825 Isolate Unclassified
151 2857472729 Cohnella sp. R-74144 Isolate Unclassified
152 2865002811 Paenibacillus sp. R-74131 Isolate Unclassified
153 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
154 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
155 2929206907 Paenibacillus sp. R-74146 Hybrid assembly Isolate Unclassified
156 2929624759 Bradyrhizobium japonicum TXEA Isolate Nodule
157 2933577622 Bradyrhizobium japonicum SEMIA 417 Isolate Nodule
158 2938649242 Paenibacillus helianthi P26E Isolate Rhizosphere
159 2968558590 Paenibacillus sp. P3E Isolate Rhizosphere
160 2971403814 Paenibacillus tritici LMG 29502 Isolate Unclassified
161 2988225383 Paenibacillus sp. P46E Isolate Rhizosphere
162 2996632988 Paenibacillus sp. P32E Isolate Rhizosphere
163 3006826541 Bacillus haikouensis CrR16 Isolate Unclassified
164 641228493 Gluconacetobacter diazotrophicus PA1 5 Isolate Unclassified
165 643348555 Gluconacetobacter diazotrophicus PA1 5 Isolate Unclassified
166 8002317523 Cohnella sp. GbtcB17 Isolate Unclassified
167 8046991243 Cohnella rhizosphaerae DSM 28161 Isolate Rhizosphere
168 8054465665 Paenibacillus sonchi IIRRBNF1 Isolate Rhizosphere
169 8055742211 Bradyrhizobium japonicum 5038 Isolate Nodule
170 8057977335 Paenibacillus oenotherae DT7-4 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 88.46
Metatranscriptomes 0
Isolates 11.54

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.12
Nodule 2.14
Rhizoplane 1.28
Rhizosphere 74.36
Stem 0
Stem Tuber 0
Unclassified 0.43

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496117_0014915 3300048920 Bacteria 6663
2 Ga0055541_1003193 3300003841 Bacteria 3126
3 Ga0070670_100058788 3300005331 Bacteria 3300
4 Ga0068869_100030874 3300005334 Bacteria 3766
5 Ga0070689_100068961 3300005340 Bacteria 2758
6 Ga0070674_100009626 3300005356 Bacteria 5794
7 Ga0070688_100019743 3300005365 Bacteria 3907
8 Ga0070713_100234712 3300005436 Bacteria 1668
9 Ga0070710_10018304 3300005437 Bacteria 3602
10 Ga0070701_10032878 3300005438 Bacteria 2587
11 Ga0070707_100074296 3300005468 Bacteria 3278
12 Ga0070698_100006870 3300005471 Bacteria 12328
13 Ga0070698_100052799 3300005471 Bacteria 4132
14 Ga0070679_100021660 3300005530 Bacteria 6277
15 Ga0070679_100022088 3300005530 Bacteria 6216
16 Ga0070672_100000322 3300005543 Bacteria 27270
17 Ga0070665_100000687 3300005548 Bacteria 45201
18 Ga0068855_100008828 3300005563 Bacteria 12180
19 Ga0068855_100249093 3300005563 Bacteria 1982
20 Ga0068863_100019552 3300005841 Bacteria 6477
21 Ga0081540_1053802 3300005983 Bacteria 1971
22 Ga0070717_10128861 3300006028 Bacteria 2174
23 Ga0070715_10005037 3300006163 Bacteria 4380
24 Ga0075366_10034586 3300006195 Bacteria 2976
25 Ga0075431_100075198 3300006847 Bacteria 3486
26 Ga0075431_100285320 3300006847 Bacteria 1671
27 Ga0075434_100108476 3300006871 Bacteria 2786
28 Ga0075429_100049717 3300006880 Bacteria 3647
29 Ga0075429_100105087 3300006880 Bacteria 2467
30 Ga0075429_100172936 3300006880 Bacteria 1892
31 Ga0075435_100070385 3300007076 Bacteria 2855
32 Ga0105245_10000176 3300009098 Bacteria 60974
33 Ga0105247_10006643 3300009101 Bacteria 7145
34 Ga0105238_10039450 3300009551 Bacteria 4788
35 Ga0105249_10063169 3300009553 Bacteria 3401
36 Ga0157374_10044540 3300013296 Bacteria 4101
37 Ga0157378_10112491 3300013297 Bacteria 2498
38 Ga0157376_10065132 3300014969 Bacteria 3076
39 Ga0209566_100108 3300025225 Bacteria 119382
40 Ga0209758_1002552 3300025297 Bacteria 18364
41 Ga0207692_10048838 3300025898 Bacteria 2132
42 Ga0207710_10004893 3300025900 Bacteria 5806
43 Ga0207693_10094751 3300025915 Bacteria 2340
44 Ga0207652_10069379 3300025921 Bacteria 3060
45 Ga0207652_10193006 3300025921 Bacteria 1832
46 Ga0207646_10081845 3300025922 Bacteria 2887
47 Ga0207650_10061131 3300025925 Bacteria 2812
48 Ga0207687_10000448 3300025927 Bacteria 28044
49 Ga0207664_10071959 3300025929 Bacteria 2786
50 Ga0207709_10153852 3300025935 Bacteria 1596
51 Ga0207670_10129335 3300025936 Bacteria 1847
52 Ga0207669_10111129 3300025937 Bacteria 1837
53 Ga0207669_10152122 3300025937 Bacteria 1622
54 Ga0207665_10025553 3300025939 Bacteria 3897
55 Ga0207691_10001062 3300025940 Bacteria 27302
56 Ga0207689_10025871 3300025942 Bacteria 4916
57 Ga0207667_10067165 3300025949 Bacteria 3736
58 Ga0207667_10086191 3300025949 Bacteria 3250
59 Ga0207712_10037414 3300025961 Bacteria 3311
60 Ga0207702_10193372 3300026078 Unclassified 1881
61 Ga0207641_10022393 3300026088 Bacteria 5202
62 Ga0207676_10040323 3300026095 Bacteria 3579
63 Ga0207683_10027449 3300026121 Bacteria 4919
64 Ga0268266_10000340 3300028379 Bacteria 73049
65 Ga0268266_10033369 3300028379 Bacteria 4376
66 Ga0268266_10046836 3300028379 Bacteria 3702
67 Ga0265337_1003864 3300028556 Bacteria 6359
68 Ga0265326_10010247 3300028558 Bacteria 2784
69 Ga0265318_10001739 3300028577 Bacteria 12456
70 Ga0265318_10003444 3300028577 Bacteria 7940
71 Ga0265323_10000562 3300028653 Bacteria 20564
72 Ga0265323_10031835 3300028653 Bacteria 1958
73 Ga0307515_10007303 3300028794 Bacteria 21869
74 Ga0265338_10022984 3300028800 Bacteria 6429
75 Ga0265338_10078530 3300028800 Bacteria 2783
76 Ga0265338_10101188 3300028800 Bacteria 2347
77 Ga0265324_10000084 3300029957 Bacteria 73716
78 Ga0307511_10045060 3300030521 Bacteria 3652
79 Ga0265330_10003764 3300031235 Bacteria 7832
80 Ga0265330_10009513 3300031235 Bacteria 4616
81 Ga0265332_10003775 3300031238 Bacteria 7243
82 Ga0265332_10006913 3300031238 Bacteria 5142
83 Ga0265320_10000392 3300031240 Bacteria 35392
84 Ga0265320_10025185 3300031240 Bacteria 3132
85 Ga0265325_10000987 3300031241 Bacteria 20425
86 Ga0265325_10012720 3300031241 Bacteria 4804
87 Ga0265325_10015050 3300031241 Bacteria 4360
88 Ga0265325_10024080 3300031241 Bacteria 3314
89 Ga0265325_10033504 3300031241 Bacteria 2739
90 Ga0265329_10000067 3300031242 Bacteria 46423
91 Ga0265340_10000395 3300031247 Bacteria 23293
92 Ga0265340_10004911 3300031247 Bacteria 7437
93 Ga0265340_10009430 3300031247 Bacteria 5238
94 Ga0265340_10013013 3300031247 Bacteria 4383
95 Ga0265340_10038237 3300031247 Bacteria 2375
96 Ga0265339_10000027 3300031249 Bacteria 158763
97 Ga0265339_10100351 3300031249 Bacteria 1507
98 Ga0265331_10034112 3300031250 Bacteria 2512
99 Ga0265331_10048310 3300031250 Bacteria 2046
100 Ga0265331_10049463 3300031250 Bacteria 2019
101 Ga0265316_10000074 3300031344 Bacteria 102906
102 Ga0265316_10002574 3300031344 Bacteria 18729
103 Ga0265316_10005767 3300031344 Bacteria 11957
104 Ga0307513_10024453 3300031456 Bacteria 7028
105 Ga0307513_10118078 3300031456 Bacteria 2628
106 Ga0307509_10000046 3300031507 Bacteria 172014
107 Ga0307509_10050485 3300031507 Bacteria 4454
108 Ga0265313_10000200 3300031595 Bacteria 64492
109 Ga0265313_10000226 3300031595 Bacteria 60827
110 Ga0265313_10006633 3300031595 Bacteria 8122
111 Ga0307508_10028984 3300031616 Bacteria 5004
112 Ga0265314_10038773 3300031711 Bacteria 3439
113 Ga0265342_10000317 3300031712 Bacteria 55013
114 Ga0265342_10002025 3300031712 Bacteria 18030
115 Ga0265342_10037182 3300031712 Bacteria 2970
116 Ga0307516_10102179 3300031730 Bacteria 2681
117 Ga0307406_10003069 3300031901 Bacteria 9086
118 Ga0307406_10004732 3300031901 Bacteria 7411
119 Ga0373936_0000019 3300035113 Bacteria 146661
120 Ga0373961_0000017 3300035241 Bacteria 105557
121 Ga0373927_0024124 3300035695 Bacteria 3979
122 Ga0373925_0118259 3300037068 Bacteria 2055
123 Ga0373925_0189757 3300037068 Bacteria 1630
124 Ga0395905_0048094 3300037471 Bacteria 3998
125 Ga0395905_0131293 3300037471 Bacteria 2356
126 Ga0395901_0225231 3300038443 Bacteria 1959
127 Ga0436365_1278753 3300039437 Bacteria 2766
128 Ga0436365_1297411 3300039437 Bacteria 2916
129 Ga0436365_1723469 3300039437 Bacteria 9983
130 Ga0436361_0586338 3300039447 Bacteria 2231
131 Ga0436361_0984265 3300039447 Bacteria 4036
132 Ga0451837_1785496 3300041494 Bacteria 2283
133 Ga0439445_0007325 3300042004 Bacteria 2558
134 Ga0451577_0005453 3300042876 Bacteria 13030
135 Ga0451577_0009118 3300042876 Bacteria 9574
136 Ga0451577_0056316 3300042876 Bacteria 3506
137 Ga0451577_0143762 3300042876 Bacteria 2144
138 Ga0466972_0052126 3300044658 Bacteria 1973
139 Ga0453683_0000304 3300044673 Bacteria 61772
140 Ga0453683_0001722 3300044673 Bacteria 18165
141 Ga0453683_0028189 3300044673 Bacteria 3556
142 Ga0453684_0002540 3300044712 Bacteria 43933
143 Ga0453684_0002938 3300044712 Bacteria 39979
144 Ga0453684_0020463 3300044712 Bacteria 9975
145 Ga0453684_0149086 3300044712 Bacteria 2782
146 Ga0451576_0000967 3300045051 Bacteria 53617
147 Ga0451576_0009647 3300045051 Bacteria 11170
148 Ga0451576_0041670 3300045051 Bacteria 4853
149 Ga0451576_0058850 3300045051 Bacteria 4013
150 Ga0495638_0039373 3300046460 Bacteria 3001
151 Ga0495651_0146520 3300046462 Bacteria 1706
152 Ga0495650_0014784 3300046471 Bacteria 4037
153 Ga0495630_0159023 3300046517 Bacteria 1720
154 Ga0495586_0036374 3300046535 Bacteria 2643
155 Ga0495622_0044229 3300046557 Bacteria 2070
156 Ga0495635_0138733 3300046663 Bacteria 1656
157 Ga0495588_0059842 3300046674 Bacteria 1971
158 Ga0495599_0018884 3300046678 Bacteria 4298
159 Ga0495599_0115645 3300046678 Bacteria 1669
160 Ga0495646_0075255 3300046680 Bacteria 1980
161 Ga0495600_0068830 3300046809 Bacteria 2313
162 Ga0495604_0047232 3300047317 Bacteria 3354
163 Ga0495674_0012411 3300047319 Bacteria 8028
164 Ga0495672_0023016 3300047320 Bacteria 4039
165 Ga0495680_0102968 3300047322 Bacteria 2125
166 Ga0495673_0026877 3300047469 Bacteria 2745
167 Ga0495686_0007372 3300047472 Bacteria 8252
168 Ga0496104_0200561 3300048907 Bacteria 1907
169 Ga0496114_0061443 3300048917 Bacteria 3143
170 Ga0496115_0181059 3300048918 Bacteria 1742
171 Ga0496116_0051418 3300048919 Bacteria 2737
172 Ga0496119_0057574 3300048922 Bacteria 2348
173 Ga0496121_0009101 3300048924 Bacteria 11491
174 Ga0496126_0010156 3300048929 Bacteria 9911
175 Ga0496126_0016798 3300048929 Bacteria 7306
176 Ga0501034_0005792 3300049571 Bacteria 13441
177 Ga0501047_0017028 3300049581 Bacteria 6950
178 Ga0501068_0065152 3300049584 Bacteria 2218
179 Ga0501070_0035213 3300049586 Bacteria 4184
180 Ga0501070_0042551 3300049586 Bacteria 3783
181 Ga0501076_0144188 3300049592 Bacteria 1936
182 Ga0501216_004793 3300049660 Bacteria 2020
183 Ga0501227_001230 3300049665 Bacteria 5750
184 Ga0501081_0146347 3300049743 Bacteria 1696
185 Ga0501044_0098155 3300049823 Bacteria 2949
186 nmdc:mga0yw44_2885_c1 3300050492 Bacteria 7472
187 nmdc:mga0k408_29978_c1 3300050493 Bacteria 3100
188 nmdc:mga09592_325699_c1 3300050508 Bacteria 1331
189 nmdc:mga09592_53906_c1 3300050508 Bacteria 3397
190 nmdc:mga06r32_175392_c1 3300050510 Bacteria 2128
191 nmdc:mga06r32_23973_c1 3300050510 Bacteria 5655
192 nmdc:mga06r32_31693_c1 3300050510 Bacteria 4967
193 nmdc:mga0rr50_186856_c1 3300050513 Bacteria 1696
194 Ga0495601_0043881 3300053077 Bacteria 2809
195 Ga0500651_0002950 3300053093 Bacteria 9157
196 Ga0500566_0011960 3300053094 Bacteria 5110
197 Ga0500566_0019217 3300053094 Bacteria 4011
198 Ga0500566_0055412 3300053094 Bacteria 2258
199 Ga0500640_007272 3300053095 Bacteria 4296
200 Ga0500572_002907 3300053111 Bacteria 4019
201 Ga0500594_0021864 3300053118 Bacteria 1608
202 Ga0500595_001569 3300053119 Bacteria 12078
203 Ga0500595_003741 3300053119 Bacteria 7011
204 Ga0500595_004067 3300053119 Bacteria 6652
205 Ga0500614_002271 3300053123 Bacteria 4327
206 Ga0500559_0028807 3300053136 Bacteria 2374
207 Ga0500568_0023162 3300053139 Bacteria 2644
208 2524542366 2524023228 Bacteria 10118060
209 2528856869 2528768022 Bacteria 10457665
210 2571527801 2571042143 Bacteria 6986194
211 2587744978 2585428059 Bacteria 8696589
212 2644422925 2643221676 Bacteria 8119172
213 2819673428 2818991459 Bacteria 8736032
214 2842776691 2842775625 Bacteria 5587290
215 2857474108 2857472729 Bacteria 6568124
216 2865008206 2865002811 Bacteria 6333767
217 2904113563 2904113452 Bacteria 7796941
218 2929201797 2929199973 Bacteria 7260745
219 2929209405 2929206907 Bacteria 5918291
220 2929631757 2929624759 Bacteria 9339455
221 2933583546 2933577622 Bacteria 9116884
222 2938653835 2938649242 Bacteria 7118381
223 2968560863 2968558590 Bacteria 6956864
224 2971409980 2971403814 Bacteria 7370929
225 2988226376 2988225383 Bacteria 7221625
226 2996639334 2996632988 Bacteria 6921523
227 3006827220 3006826541 Bacteria 4678913
228 641334125 641228493 Bacteria 3999591
229 643391759 643348555 Bacteria 3914947
230 8002323172 8002317523 Bacteria 8051857
231 8046994456 8046991243 Bacteria 8497463
232 8054472161 8054465665 Bacteria 7323556
233 8055744368 8055742211 Bacteria 9226248
234 8057982436 8057977335 Bacteria 5694872
235 Ga0496117_0014915
236 Ga0055541_1003193
237 Ga0070670_100058788
238 Ga0068869_100030874
239 Ga0070689_100068961
240 Ga0070674_100009626
241 Ga0070688_100019743
242 Ga0070713_100234712
243 Ga0070710_10018304
244 Ga0070701_10032878
245 Ga0070707_100074296
246 Ga0070698_100006870
247 Ga0070698_100052799
248 Ga0070679_100021660
249 Ga0070679_100022088
250 Ga0070672_100000322
251 Ga0070665_100000687
252 Ga0068855_100008828
253 Ga0068855_100249093
254 Ga0068863_100019552
255 Ga0081540_1053802
256 Ga0070717_10128861
257 Ga0070715_10005037
258 Ga0075366_10034586
259 Ga0075431_100075198
260 Ga0075431_100285320
261 Ga0075434_100108476
262 Ga0075429_100049717
263 Ga0075429_100105087
264 Ga0075429_100172936
265 Ga0075435_100070385
266 Ga0105245_10000176
267 Ga0105247_10006643
268 Ga0105238_10039450
269 Ga0105249_10063169
270 Ga0157374_10044540
271 Ga0157378_10112491
272 Ga0157376_10065132
273 Ga0209566_100108
274 Ga0209758_1002552
275 Ga0207692_10048838
276 Ga0207710_10004893
277 Ga0207693_10094751
278 Ga0207652_10069379
279 Ga0207652_10193006
280 Ga0207646_10081845
281 Ga0207650_10061131
282 Ga0207687_10000448
283 Ga0207664_10071959
284 Ga0207709_10153852
285 Ga0207670_10129335
286 Ga0207669_10111129
287 Ga0207669_10152122
288 Ga0207665_10025553
289 Ga0207691_10001062
290 Ga0207689_10025871
291 Ga0207667_10067165
292 Ga0207667_10086191
293 Ga0207712_10037414
294 Ga0207702_10193372
295 Ga0207641_10022393
296 Ga0207676_10040323
297 Ga0207683_10027449
298 Ga0268266_10000340
299 Ga0268266_10033369
300 Ga0268266_10046836
301 Ga0265337_1003864
302 Ga0265326_10010247
303 Ga0265318_10001739
304 Ga0265318_10003444
305 Ga0265323_10000562
306 Ga0265323_10031835
307 Ga0307515_10007303
308 Ga0265338_10022984
309 Ga0265338_10078530
310 Ga0265338_10101188
311 Ga0265324_10000084
312 Ga0307511_10045060
313 Ga0265330_10003764
314 Ga0265330_10009513
315 Ga0265332_10003775
316 Ga0265332_10006913
317 Ga0265320_10000392
318 Ga0265320_10025185
319 Ga0265325_10000987
320 Ga0265325_10012720
321 Ga0265325_10015050
322 Ga0265325_10024080
323 Ga0265325_10033504
324 Ga0265329_10000067
325 Ga0265340_10000395
326 Ga0265340_10004911
327 Ga0265340_10009430
328 Ga0265340_10013013
329 Ga0265340_10038237
330 Ga0265339_10000027
331 Ga0265339_10100351
332 Ga0265331_10034112
333 Ga0265331_10048310
334 Ga0265331_10049463
335 Ga0265316_10000074
336 Ga0265316_10002574
337 Ga0265316_10005767
338 Ga0307513_10024453
339 Ga0307513_10118078
340 Ga0307509_10000046
341 Ga0307509_10050485
342 Ga0265313_10000200
343 Ga0265313_10000226
344 Ga0265313_10006633
345 Ga0307508_10028984
346 Ga0265314_10038773
347 Ga0265342_10000317
348 Ga0265342_10002025
349 Ga0265342_10037182
350 Ga0307516_10102179
351 Ga0307406_10003069
352 Ga0307406_10004732
353 Ga0373936_0000019
354 Ga0373961_0000017
355 Ga0373927_0024124
356 Ga0373925_0118259
357 Ga0373925_0189757
358 Ga0395905_0048094
359 Ga0395905_0131293
360 Ga0395901_0225231
361 Ga0436365_1278753
362 Ga0436365_1297411
363 Ga0436365_1723469
364 Ga0436361_0586338
365 Ga0436361_0984265
366 Ga0451837_1785496
367 Ga0439445_0007325
368 Ga0451577_0005453
369 Ga0451577_0009118
370 Ga0451577_0056316
371 Ga0451577_0143762
372 Ga0466972_0052126
373 Ga0453683_0000304
374 Ga0453683_0001722
375 Ga0453683_0028189
376 Ga0453684_0002540
377 Ga0453684_0002938
378 Ga0453684_0020463
379 Ga0453684_0149086
380 Ga0451576_0000967
381 Ga0451576_0009647
382 Ga0451576_0041670
383 Ga0451576_0058850
384 Ga0495638_0039373
385 Ga0495651_0146520
386 Ga0495650_0014784
387 Ga0495630_0159023
388 Ga0495586_0036374
389 Ga0495622_0044229
390 Ga0495635_0138733
391 Ga0495588_0059842
392 Ga0495599_0018884
393 Ga0495599_0115645
394 Ga0495646_0075255
395 Ga0495600_0068830
396 Ga0495604_0047232
397 Ga0495674_0012411
398 Ga0495672_0023016
399 Ga0495680_0102968
400 Ga0495673_0026877
401 Ga0495686_0007372
402 Ga0496104_0200561
403 Ga0496114_0061443
404 Ga0496115_0181059
405 Ga0496116_0051418
406 Ga0496119_0057574
407 Ga0496121_0009101
408 Ga0496126_0010156
409 Ga0496126_0016798
410 Ga0501034_0005792
411 Ga0501047_0017028
412 Ga0501068_0065152
413 Ga0501070_0035213
414 Ga0501070_0042551
415 Ga0501076_0144188
416 Ga0501216_004793
417 Ga0501227_001230
418 Ga0501081_0146347
419 Ga0501044_0098155
420 nmdc:mga0yw44_2885_c1
421 nmdc:mga0k408_29978_c1
422 nmdc:mga09592_325699_c1
423 nmdc:mga09592_53906_c1
424 nmdc:mga06r32_175392_c1
425 nmdc:mga06r32_23973_c1
426 nmdc:mga06r32_31693_c1
427 nmdc:mga0rr50_186856_c1
428 Ga0495601_0043881
429 Ga0500651_0002950
430 Ga0500566_0011960
431 Ga0500566_0019217
432 Ga0500566_0055412
433 Ga0500640_007272
434 Ga0500572_002907
435 Ga0500594_0021864
436 Ga0500595_001569
437 Ga0500595_003741
438 Ga0500595_004067
439 Ga0500614_002271
440 Ga0500559_0028807
441 Ga0500568_0023162
442 2524542366
443 2528856869
444 2571527801
445 2587744978
446 2644422925
447 2819673428
448 2842776691
449 2857474108
450 2865008206
451 2904113563
452 2929201797
453 2929209405
454 2929631757
455 2933583546
456 2938653835
457 2968560863
458 2971409980
459 2988226376
460 2996639334
461 3006827220
462 641334125
463 643391759
464 8002323172
465 8046994456
466 8054472161
467 8055744368
468 8057982436

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF16360

GTP-bdg_M

GTP-binding GTPase Middle Region

218

292

0.96

PF13167

GTP-bdg_N

GTP-binding GTPase N-terminal

174

216

0.95

PF13167

GTP-bdg_N

GTP-binding GTPase N-terminal

85

141

0.92

PF01926

MMR_HSR1

50S ribosome-binding GTPase

297

416

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
8a57-assembly1.cif.gz_D cryo-em structure of hflxr bound to the listeria monocytogenes 50s ribosomal subunit. 0.9027 12 423
8a57-assembly1.cif.gz_D cryo-em structure of hflxr bound to the listeria monocytogenes 50s ribosomal subunit. 0.8945 12 423
7of2-assembly1.cif.gz_C structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with gtpbp6. 0.8244 11 424
7yla-assembly1.cif.gz_6 cryo-em structure of 50s-hflx complex 0.8211 12 423
7of2-assembly1.cif.gz_C structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with gtpbp6. 0.8172 11 424
ID Description Score Start End Superfamily
af_Q2FYY9_24_121_3.40.50.11060 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;GTPase HflX, N-terminal domain 0.9813 27 116 3.40.50.11060
af_O33230_82_179_3.40.50.11060 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;GTPase HflX, N-terminal domain 0.9796 28 117 3.40.50.11060
af_Q2R1U5_146_245_3.40.50.11060 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;GTPase HflX, N-terminal domain 0.9787 28 118 3.40.50.11060
af_P25519_16_114_3.40.50.11060 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;GTPase HflX, N-terminal domain 0.9549 28 118 3.40.50.11060
af_P25519_197_367_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8944 203 369 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A6N8HTW9-F1-model_v4 GTPase HflX 0.9738 12 142 GO:0005525
GO:0005737
GO:0043022
GO:0046872
AF-B6FW66-F1-model_v4 GTPase HflX N-terminal domain-containing protein 0.966 12 99 GO:0005525
GO:0005737
GO:0043022
GO:0046872
AF-A0A352B6V3-F1-model_v4 GTPase HflX N-terminal domain-containing protein 0.9581 12 139 GO:0005525
GO:0005737
GO:0043022
GO:0046872
AF-A0A350W5Y5-F1-model_v4 GTPase HflX 0.9559 12 116 GO:0005525
GO:0005737
GO:0043022
GO:0046872
AF-A0A2N2F6V8-F1-model_v4 GTPase HflX 0.9537 12 140 GO:0005525
GO:0005737
GO:0043022
GO:0046872

Map