F341350

General Info

Members Datasets Scaffolds Average Seq Length
228 163 456 228

Family's Representative Sequence

Representative Sequence 3300047472|Ga0495686_0032666|Ga0495686_0032666_34_891
Length 275
Sequence VLGANVCGRGFNERGGAAVVRGMATAIETHVDGRGGVTAAINASSVSAVSVPDAVVLLSGGLDSTTALAVARSRGFACHALTVRYGQLHQVELEAAARVAAALGAAEHRVVTVDLSPIAASALTDRAIAVPKDRAMAEIGAPGDVPPTYVPARNTVLLGLALAWAETIGARDLFVGVNVLDASGYPDCRPEFVRAFEALAQVATRAGGFRVHAPLIELTKAQIIELGRSLGVDYAMTHSCYDPAPGGGACGRCDACALRRKGFAEAGVPDPTRYA

Samples

Sample ID Description Type Environment
1 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
7 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
23 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
31 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
35 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
36 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
38 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
39 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
40 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
44 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
45 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
46 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
47 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
48 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
49 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
50 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
51 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
52 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
53 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
54 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
81 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
82 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
83 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
84 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
85 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
86 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
87 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
88 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
89 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
90 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
91 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
92 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
93 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
94 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
95 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
96 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
97 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
98 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
99 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
100 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
101 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
102 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
103 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
104 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
105 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
106 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
107 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
108 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
109 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
110 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
111 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
112 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
113 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
114 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
115 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
116 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
117 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
118 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
119 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
120 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
121 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
122 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
123 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
124 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
125 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
126 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
127 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
128 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
129 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
130 3300049541 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_A_4_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
131 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
137 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
138 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
139 3300049656 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought Metagenome Rhizosphere
140 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
141 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
142 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
143 3300049667 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control Metagenome Rhizosphere
144 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
145 3300049670 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought Metagenome Rhizosphere
146 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
147 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
149 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
150 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
151 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
152 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
153 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
154 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
155 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
156 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
157 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
158 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
159 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
160 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
161 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
162 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
163 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.12
Metatranscriptomes 0.88
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.51
Nodule 0
Rhizoplane 1.32
Rhizosphere 91.23
Stem 0
Stem Tuber 0
Unclassified 3.51

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495686_0032666 3300047472 Bacteria 3366
2 Ga0070658_10625309 3300005327 Bacteria 934
3 Ga0070690_100001737 3300005330 Bacteria 11509
4 Ga0070660_100008667 3300005339 Bacteria 7124
5 Ga0070660_100485410 3300005339 Bacteria 1027
6 Ga0070689_100008428 3300005340 Bacteria 7261
7 Ga0070689_100017760 3300005340 Bacteria 5231
8 Ga0070689_100051286 3300005340 Bacteria 3189
9 Ga0070687_100007908 3300005343 Bacteria 4473
10 Ga0070687_100020800 3300005343 Bacteria 3074
11 Ga0070688_100172255 3300005365 Bacteria 1495
12 Ga0070688_100187125 3300005365 Bacteria 1440
13 Ga0070659_100006904 3300005366 Bacteria 8220
14 Ga0070659_100096258 3300005366 Bacteria 2378
15 Ga0070709_10117205 3300005434 Bacteria 1799
16 Ga0070714_100074909 3300005435 Bacteria 2936
17 Ga0070713_100587528 3300005436 Bacteria 1057
18 Ga0070700_100577449 3300005441 Bacteria 877
19 Ga0070708_100018042 3300005445 Bacteria 5902
20 Ga0070678_100004587 3300005456 Bacteria 7850
21 Ga0070681_10052119 3300005458 Bacteria 4081
22 Ga0070706_100072672 3300005467 Bacteria 3182
23 Ga0070706_100165375 3300005467 Bacteria 2066
24 Ga0070707_100000124 3300005468 Bacteria 72694
25 Ga0070698_100003180 3300005471 Bacteria 18103
26 Ga0070698_100012521 3300005471 Bacteria 8982
27 Ga0070698_100149825 3300005471 Bacteria 2281
28 Ga0070699_100080891 3300005518 Bacteria 2831
29 Ga0070699_100186418 3300005518 Bacteria 1842
30 Ga0070679_100063285 3300005530 Bacteria 3688
31 Ga0070679_100106896 3300005530 Bacteria 2784
32 Ga0070679_100578126 3300005530 Bacteria 1067
33 Ga0070684_100373026 3300005535 Bacteria 1314
34 Ga0070684_100491048 3300005535 Bacteria 1137
35 Ga0070697_100065750 3300005536 Bacteria 2964
36 Ga0070686_100009991 3300005544 Bacteria 5341
37 Ga0070665_100044313 3300005548 Bacteria 4468
38 Ga0070664_100006512 3300005564 Bacteria 9416
39 Ga0070702_100036577 3300005615 Bacteria 2721
40 Ga0070702_100419904 3300005615 Bacteria 962
41 Ga0068852_100007558 3300005616 Bacteria 7939
42 Ga0068859_100138783 3300005617 Bacteria 2505
43 Ga0068859_100240580 3300005617 Bacteria 1899
44 Ga0068859_100259459 3300005617 Bacteria 1829
45 Ga0068864_100160897 3300005618 Bacteria 2041
46 Ga0068861_100370563 3300005719 Unclassified 1262
47 Ga0068863_100521353 3300005841 Bacteria 1172
48 Ga0068860_100153419 3300005843 Bacteria 2219
49 Ga0068862_100635511 3300005844 Bacteria 1028
50 Ga0081540_1000724 3300005983 Bacteria 30388
51 Ga0070717_10129951 3300006028 Unclassified 2165
52 Ga0097621_100654847 3300006237 Bacteria 964
53 Ga0068871_100013806 3300006358 Bacteria 6005
54 Ga0075430_100092488 3300006846 Bacteria 2528
55 Ga0075429_100002227 3300006880 Bacteria 16224
56 Ga0068865_100107587 3300006881 Bacteria 2051
57 Ga0097620_100138780 3300006931 Bacteria 2505
58 Ga0097620_100240600 3300006931 Bacteria 1899
59 Ga0097620_100259463 3300006931 Bacteria 1829
60 Ga0111539_10004554 3300009094 Bacteria 18125
61 Ga0111539_10374427 3300009094 Bacteria 1658
62 Ga0111539_10668765 3300009094 Bacteria 1209
63 Ga0105245_10000017 3300009098 Bacteria 187657
64 Ga0105247_10171724 3300009101 Bacteria 1442
65 Ga0105243_10169832 3300009148 Bacteria 1888
66 Ga0105248_10537463 3300009177 Bacteria 1318
67 Ga0105239_10650543 3300010375 Bacteria 1204
68 Ga0157369_10076521 3300013105 Bacteria 3587
69 Ga0157374_10228819 3300013296 Bacteria 1826
70 Ga0157372_10005273 3300013307 Bacteria 13726
71 Ga0157372_10021018 3300013307 Bacteria 7046
72 Ga0157372_10046708 3300013307 Bacteria 4807
73 Ga0157376_10004356 3300014969 Bacteria 9844
74 Ga0157376_10055414 3300014969 Bacteria 3308
75 Ga0157376_10330556 3300014969 Unclassified 1452
76 Ga0182006_1158357 3300015261 Bacteria 764
77 Ga0182005_1004571 3300015265 Bacteria 4445
78 Ga0207705_10000598 3300025909 Bacteria 30200
79 Ga0207705_10019668 3300025909 Bacteria 4828
80 Ga0207705_10115659 3300025909 Bacteria 1985
81 Ga0207684_10100225 3300025910 Bacteria 2475
82 Ga0207707_10295684 3300025912 Bacteria 1401
83 Ga0207662_10003064 3300025918 Bacteria 8531
84 Ga0207662_10031339 3300025918 Bacteria 3089
85 Ga0207657_10004575 3300025919 Bacteria 14623
86 Ga0207652_10229667 3300025921 Bacteria 1672
87 Ga0207652_10246240 3300025921 Bacteria 1612
88 Ga0207646_10000232 3300025922 Bacteria 76603
89 Ga0207646_10598494 3300025922 Unclassified 990
90 Ga0207687_10000263 3300025927 Bacteria 35777
91 Ga0207664_10080554 3300025929 Bacteria 2647
92 Ga0207690_10014986 3300025932 Bacteria 4693
93 Ga0207670_10063793 3300025936 Bacteria 2522
94 Ga0207670_10118869 3300025936 Bacteria 1918
95 Ga0207670_10637966 3300025936 Bacteria 877
96 Ga0207711_10488842 3300025941 Bacteria 1147
97 Ga0207689_10113451 3300025942 Bacteria 2228
98 Ga0207689_10277280 3300025942 Bacteria 1388
99 Ga0207661_10019812 3300025944 Bacteria 5020
100 Ga0207661_10287911 3300025944 Bacteria 1470
101 Ga0207661_10649987 3300025944 Bacteria 969
102 Ga0207679_10003024 3300025945 Bacteria 10417
103 Ga0207651_10026994 3300025960 Bacteria 3599
104 Ga0207651_10538064 3300025960 Bacteria 1014
105 Ga0207712_10232089 3300025961 Bacteria 1482
106 Ga0207712_10252963 3300025961 Bacteria 1425
107 Ga0207708_10046138 3300026075 Bacteria 3319
108 Ga0207708_10692583 3300026075 Bacteria 870
109 Ga0207641_10028154 3300026088 Bacteria 4642
110 Ga0207641_10479546 3300026088 Bacteria 1205
111 Ga0207648_10769385 3300026089 Bacteria 895
112 Ga0207676_10120208 3300026095 Bacteria 2214
113 Ga0207675_100071462 3300026118 Bacteria 3245
114 Ga0207683_10801550 3300026121 Bacteria 874
115 Ga0207698_10005424 3300026142 Bacteria 7883
116 Ga0207698_10493339 3300026142 Bacteria 1190
117 Ga0209971_1032912 3300027682 Bacteria 1245
118 Ga0268266_10006967 3300028379 Bacteria 10274
119 Ga0265336_10018953 3300028666 Bacteria 2224
120 Ga0307515_10005412 3300028794 Bacteria 25871
121 Ga0265338_10000365 3300028800 Bacteria 81425
122 Ga0265338_10034043 3300028800 Bacteria 4933
123 Ga0265324_10071856 3300029957 Bacteria 1179
124 Ga0265332_10005249 3300031238 Bacteria 5990
125 Ga0265332_10040431 3300031238 Bacteria 2018
126 Ga0265320_10016577 3300031240 Bacteria 4123
127 Ga0265320_10071966 3300031240 Bacteria 1628
128 Ga0307513_10295792 3300031456 Bacteria 1388
129 Ga0307509_10011728 3300031507 Bacteria 10569
130 Ga0307509_10054698 3300031507 Bacteria 4247
131 Ga0307509_10060220 3300031507 Bacteria 4014
132 Ga0307508_10031174 3300031616 Bacteria 4819
133 Ga0307508_10448373 3300031616 Bacteria 883
134 Ga0307405_10115005 3300031731 Bacteria 1830
135 Ga0307416_100476910 3300032002 Bacteria 1307
136 Ga0307416_100877639 3300032002 Bacteria 996
137 Ga0307415_100017769 3300032126 Bacteria 4273
138 Ga0316593_10027802 3300032168 Bacteria 1818
139 Ga0307507_10117519 3300033179 Bacteria 2143
140 Ga0373926_0102652 3300035083 Bacteria 1070
141 Ga0373949_0000403 3300035090 Bacteria 15057
142 Ga0373923_0180496 3300035111 Bacteria 970
143 Ga0373936_0063238 3300035113 Bacteria 1515
144 Ga0373956_0141582 3300035119 Bacteria 1129
145 Ga0373942_0068256 3300035207 Bacteria 1033
146 Ga0373924_0195275 3300035410 Bacteria 892
147 Ga0373935_0066939 3300035692 Bacteria 2308
148 Ga0373933_0402518 3300035724 Unclassified 893
149 Ga0373947_0017533 3300035725 Bacteria 4119
150 Ga0373947_0495849 3300035725 Bacteria 830
151 Ga0373937_0241668 3300036401 Bacteria 1701
152 Ga0316582_0045250 3300036647 Bacteria 2771
153 Ga0316582_0055291 3300036647 Bacteria 2529
154 Ga0316584_0050673 3300036712 Bacteria 3104
155 Ga0373925_0081055 3300037068 Bacteria 2467
156 Ga0395899_0015801 3300037312 Bacteria 5755
157 Ga0395900_0039727 3300037418 Bacteria 4847
158 Ga0395898_0264899 3300037466 Bacteria 1639
159 Ga0395905_0097455 3300037471 Bacteria 2761
160 Ga0395905_0596569 3300037471 Bacteria 1006
161 Ga0395901_0007826 3300038443 Bacteria 10784
162 Ga0436365_1004018 3300039437 Bacteria 2686
163 Ga0451793_0533134 3300041452 Bacteria 1045
164 Ga0439442_001988 3300042002 Bacteria 4024
165 Ga0451577_0062194 3300042876 Bacteria 3329
166 Ga0453684_0084869 3300044712 Bacteria 3937
167 Ga0451576_0004773 3300045051 Bacteria 17379
168 Ga0451576_0022814 3300045051 Bacteria 6781
169 Ga0451576_0053743 3300045051 Bacteria 4218
170 Ga0451576_0062878 3300045051 Bacteria 3869
171 Ga0495639_0134390 3300046475 Bacteria 1186
172 Ga0495594_0025726 3300046499 Bacteria 3164
173 Ga0495594_0058093 3300046499 Bacteria 2136
174 Ga0495630_0280209 3300046517 Bacteria 1274
175 Ga0495635_0074655 3300046663 Bacteria 2323
176 Ga0495657_0005916 3300046675 Bacteria 9611
177 Ga0495647_0100790 3300046681 Bacteria 1196
178 Ga0495600_0136969 3300046809 Bacteria 1590
179 Ga0495581_0012889 3300047315 Bacteria 4844
180 Ga0496100_0468283 3300048903 Bacteria 968
181 Ga0496115_0305588 3300048918 Bacteria 1303
182 Ga0501292_007786 3300049515 Bacteria 1554
183 Ga0501292_031312 3300049515 Bacteria 895
184 Ga0501325_014511 3300049541 Bacteria 767
185 Ga0501033_0128757 3300049570 Bacteria 1835
186 Ga0501034_0446103 3300049571 Bacteria 1212
187 Ga0501034_0594779 3300049571 Bacteria 1012
188 Ga0501034_0598922 3300049571 Bacteria 1008
189 Ga0501037_0303179 3300049573 Bacteria 1109
190 Ga0501046_0207254 3300049580 Bacteria 1457
191 Ga0501047_0004909 3300049581 Bacteria 12561
192 Ga0501047_0880371 3300049581 Bacteria 709
193 Ga0501067_0058718 3300049583 Bacteria 2130
194 Ga0501068_0117772 3300049584 Bacteria 1655
195 Ga0501070_0089484 3300049586 Bacteria 2547
196 Ga0501070_0093512 3300049586 Bacteria 2487
197 Ga0501070_0237766 3300049586 Bacteria 1491
198 Ga0501070_0472132 3300049586 Bacteria 1010
199 Ga0501209_061075 3300049656 Bacteria 1052
200 Ga0501217_014264 3300049661 Bacteria 1792
201 Ga0501223_029899 3300049663 Unclassified 1060
202 Ga0501227_000019 3300049665 Bacteria 25353
203 Ga0501230_000294 3300049667 Bacteria 4642
204 Ga0501233_004617 3300049668 Bacteria 2533
205 Ga0501236_008177 3300049670 Bacteria 1325
206 Ga0501080_0251012 3300049742 Bacteria 1613
207 Ga0501080_0268613 3300049742 Bacteria 1553
208 Ga0501035_0000109 3300049822 Bacteria 99544
209 Ga0501035_0563656 3300049822 Bacteria 932
210 Ga0501044_0066358 3300049823 Bacteria 3679
211 Ga0501044_0199263 3300049823 Bacteria 1961
212 nmdc:mga05p37_519685_c1 3300050507 Bacteria 1362
213 nmdc:mga09592_271840_c1 3300050508 Bacteria 1470
214 nmdc:mga09592_471899_c1 3300050508 Bacteria 1082
215 nmdc:mga0qj67_608484_c1 3300050509 Bacteria 874
216 nmdc:mga08y16_2490_c1 3300050511 Bacteria 18924
217 nmdc:mga0n895_325913_c1 3300050512 Bacteria 1556
218 nmdc:mga0a205_232612_c1 3300050515 Bacteria 1726
219 Ga0495619_0039652 3300053085 Bacteria 3075
220 Ga0500583_0066625 3300053092 Unclassified 1714
221 Ga0500556_0000341 3300053104 Bacteria 34888
222 Ga0500597_066710 3300053120 Unclassified 1551
223 Ga0500614_001261 3300053123 Bacteria 6118
224 Ga0500568_0007663 3300053139 Bacteria 5275
225 Ga0500568_0031425 3300053139 Bacteria 2191
226 Ga0500638_045286 3300053162 Bacteria 2135
227 Ga0500636_0121630 3300053177 Bacteria 1464
228 Ga0501082_0139101 3300060353 Bacteria 2107
229 Ga0495686_0032666
230 Ga0070658_10625309
231 Ga0070690_100001737
232 Ga0070660_100008667
233 Ga0070660_100485410
234 Ga0070689_100008428
235 Ga0070689_100017760
236 Ga0070689_100051286
237 Ga0070687_100007908
238 Ga0070687_100020800
239 Ga0070688_100172255
240 Ga0070688_100187125
241 Ga0070659_100006904
242 Ga0070659_100096258
243 Ga0070709_10117205
244 Ga0070714_100074909
245 Ga0070713_100587528
246 Ga0070700_100577449
247 Ga0070708_100018042
248 Ga0070678_100004587
249 Ga0070681_10052119
250 Ga0070706_100072672
251 Ga0070706_100165375
252 Ga0070707_100000124
253 Ga0070698_100003180
254 Ga0070698_100012521
255 Ga0070698_100149825
256 Ga0070699_100080891
257 Ga0070699_100186418
258 Ga0070679_100063285
259 Ga0070679_100106896
260 Ga0070679_100578126
261 Ga0070684_100373026
262 Ga0070684_100491048
263 Ga0070697_100065750
264 Ga0070686_100009991
265 Ga0070665_100044313
266 Ga0070664_100006512
267 Ga0070702_100036577
268 Ga0070702_100419904
269 Ga0068852_100007558
270 Ga0068859_100138783
271 Ga0068859_100240580
272 Ga0068859_100259459
273 Ga0068864_100160897
274 Ga0068861_100370563
275 Ga0068863_100521353
276 Ga0068860_100153419
277 Ga0068862_100635511
278 Ga0081540_1000724
279 Ga0070717_10129951
280 Ga0097621_100654847
281 Ga0068871_100013806
282 Ga0075430_100092488
283 Ga0075429_100002227
284 Ga0068865_100107587
285 Ga0097620_100138780
286 Ga0097620_100240600
287 Ga0097620_100259463
288 Ga0111539_10004554
289 Ga0111539_10374427
290 Ga0111539_10668765
291 Ga0105245_10000017
292 Ga0105247_10171724
293 Ga0105243_10169832
294 Ga0105248_10537463
295 Ga0105239_10650543
296 Ga0157369_10076521
297 Ga0157374_10228819
298 Ga0157372_10005273
299 Ga0157372_10021018
300 Ga0157372_10046708
301 Ga0157376_10004356
302 Ga0157376_10055414
303 Ga0157376_10330556
304 Ga0182006_1158357
305 Ga0182005_1004571
306 Ga0207705_10000598
307 Ga0207705_10019668
308 Ga0207705_10115659
309 Ga0207684_10100225
310 Ga0207707_10295684
311 Ga0207662_10003064
312 Ga0207662_10031339
313 Ga0207657_10004575
314 Ga0207652_10229667
315 Ga0207652_10246240
316 Ga0207646_10000232
317 Ga0207646_10598494
318 Ga0207687_10000263
319 Ga0207664_10080554
320 Ga0207690_10014986
321 Ga0207670_10063793
322 Ga0207670_10118869
323 Ga0207670_10637966
324 Ga0207711_10488842
325 Ga0207689_10113451
326 Ga0207689_10277280
327 Ga0207661_10019812
328 Ga0207661_10287911
329 Ga0207661_10649987
330 Ga0207679_10003024
331 Ga0207651_10026994
332 Ga0207651_10538064
333 Ga0207712_10232089
334 Ga0207712_10252963
335 Ga0207708_10046138
336 Ga0207708_10692583
337 Ga0207641_10028154
338 Ga0207641_10479546
339 Ga0207648_10769385
340 Ga0207676_10120208
341 Ga0207675_100071462
342 Ga0207683_10801550
343 Ga0207698_10005424
344 Ga0207698_10493339
345 Ga0209971_1032912
346 Ga0268266_10006967
347 Ga0265336_10018953
348 Ga0307515_10005412
349 Ga0265338_10000365
350 Ga0265338_10034043
351 Ga0265324_10071856
352 Ga0265332_10005249
353 Ga0265332_10040431
354 Ga0265320_10016577
355 Ga0265320_10071966
356 Ga0307513_10295792
357 Ga0307509_10011728
358 Ga0307509_10054698
359 Ga0307509_10060220
360 Ga0307508_10031174
361 Ga0307508_10448373
362 Ga0307405_10115005
363 Ga0307416_100476910
364 Ga0307416_100877639
365 Ga0307415_100017769
366 Ga0316593_10027802
367 Ga0307507_10117519
368 Ga0373926_0102652
369 Ga0373949_0000403
370 Ga0373923_0180496
371 Ga0373936_0063238
372 Ga0373956_0141582
373 Ga0373942_0068256
374 Ga0373924_0195275
375 Ga0373935_0066939
376 Ga0373933_0402518
377 Ga0373947_0017533
378 Ga0373947_0495849
379 Ga0373937_0241668
380 Ga0316582_0045250
381 Ga0316582_0055291
382 Ga0316584_0050673
383 Ga0373925_0081055
384 Ga0395899_0015801
385 Ga0395900_0039727
386 Ga0395898_0264899
387 Ga0395905_0097455
388 Ga0395905_0596569
389 Ga0395901_0007826
390 Ga0436365_1004018
391 Ga0451793_0533134
392 Ga0439442_001988
393 Ga0451577_0062194
394 Ga0453684_0084869
395 Ga0451576_0004773
396 Ga0451576_0022814
397 Ga0451576_0053743
398 Ga0451576_0062878
399 Ga0495639_0134390
400 Ga0495594_0025726
401 Ga0495594_0058093
402 Ga0495630_0280209
403 Ga0495635_0074655
404 Ga0495657_0005916
405 Ga0495647_0100790
406 Ga0495600_0136969
407 Ga0495581_0012889
408 Ga0496100_0468283
409 Ga0496115_0305588
410 Ga0501292_007786
411 Ga0501292_031312
412 Ga0501325_014511
413 Ga0501033_0128757
414 Ga0501034_0446103
415 Ga0501034_0594779
416 Ga0501034_0598922
417 Ga0501037_0303179
418 Ga0501046_0207254
419 Ga0501047_0004909
420 Ga0501047_0880371
421 Ga0501067_0058718
422 Ga0501068_0117772
423 Ga0501070_0089484
424 Ga0501070_0093512
425 Ga0501070_0237766
426 Ga0501070_0472132
427 Ga0501209_061075
428 Ga0501217_014264
429 Ga0501223_029899
430 Ga0501227_000019
431 Ga0501230_000294
432 Ga0501233_004617
433 Ga0501236_008177
434 Ga0501080_0251012
435 Ga0501080_0268613
436 Ga0501035_0000109
437 Ga0501035_0563656
438 Ga0501044_0066358
439 Ga0501044_0199263
440 nmdc:mga05p37_519685_c1
441 nmdc:mga09592_271840_c1
442 nmdc:mga09592_471899_c1
443 nmdc:mga0qj67_608484_c1
444 nmdc:mga08y16_2490_c1
445 nmdc:mga0n895_325913_c1
446 nmdc:mga0a205_232612_c1
447 Ga0495619_0039652
448 Ga0500583_0066625
449 Ga0500556_0000341
450 Ga0500597_066710
451 Ga0500614_001261
452 Ga0500568_0007663
453 Ga0500568_0031425
454 Ga0500638_045286
455 Ga0500636_0121630
456 Ga0501082_0139101

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06508

QueC

Queuosine biosynthesis protein QueC

53

267

0.96

PF00733

Asn_synthase

Asparagine synthase

38

136

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
3bl5-assembly6.cif.gz_F crystal structure of quec from bacillus subtilis: an enzyme involved in preq1 biosynthesis 0.8307 1 219
3bl5-assembly1.cif.gz_A crystal structure of quec from bacillus subtilis: an enzyme involved in preq1 biosynthesis 0.8274 1 219
2pg3-assembly1.cif.gz_A-2 crystal structure of a queuosine biosynthesis protein quec (eca1155) from erwinia carotovora subsp. atroseptica scri1043 at 2.40 a resolution 0.8259 1 216
3bl5-assembly6.cif.gz_F crystal structure of quec from bacillus subtilis: an enzyme involved in preq1 biosynthesis 0.815 1 219
3bl5-assembly1.cif.gz_A crystal structure of quec from bacillus subtilis: an enzyme involved in preq1 biosynthesis 0.8113 1 219
ID Description Score Start End Superfamily
af_Q58742_1_231_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9156 3 226 3.40.50.620
af_Q2G1X6_7_221_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.886 1 218 3.40.50.620
af_Q58742_1_231_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.885 3 226 3.40.50.620
af_Q2G1X6_7_221_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8584 1 218 3.40.50.620
af_Q4DRR6_1_276_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.7988 1 32 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A6N8E7E6-F1-model_v4 7-cyano-7-deazaguanine synthase (EC 6.3.4.20) (7-cyano-7-carbaguanine synthase) (PreQ(0) synthase) (Queuosine biosynthesis protein QueC) 0.9911 1 223 GO:0005524
GO:0008270
GO:0008616
GO:0016879
AF-A0A6J4F7Q5-F1-model_v4 7-cyano-7-deazaguanine synthase (EC 6.3.4.20) (7-cyano-7-carbaguanine synthase) (PreQ(0) synthase) (Queuosine biosynthesis protein QueC) 0.9904 1 228 GO:0005524
GO:0008270
GO:0008616
GO:0016879
AF-A0A7V5V581-F1-model_v4 7-cyano-7-deazaguanine synthase (EC 6.3.4.20) (7-cyano-7-carbaguanine synthase) (PreQ(0) synthase) (Queuosine biosynthesis protein QueC) 0.989 2 227 GO:0005524
GO:0008270
GO:0008616
GO:0016879
AF-A0A523FCC9-F1-model_v4 7-cyano-7-deazaguanine synthase (EC 6.3.4.20) (7-cyano-7-carbaguanine synthase) (PreQ(0) synthase) (Queuosine biosynthesis protein QueC) 0.9889 2 228 GO:0005524
GO:0008270
GO:0008616
GO:0016879
AF-A0A1F7RS69-F1-model_v4 7-cyano-7-deazaguanine synthase (EC 6.3.4.20) (7-cyano-7-carbaguanine synthase) (PreQ(0) synthase) (Queuosine biosynthesis protein QueC) 0.9888 1 224 GO:0005524
GO:0008270
GO:0008616
GO:0016879

Map